Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001719

Physical Location & Seq

Genomic Coordinates Forward (+)

19108580 .. 19111126

Gene Structure 2547 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1233600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGAACCATTTTCTCAAGGATTCATGGACTCGCTTGGCTTCCACTATCCGTCGCCGTCACTTGACTGTTAGTCTGCCGTTGACCCATCATACTTACCATCGCCAATGCTCTCATATTTCCGGGAACAATTCCGCGCCGGAGTCATGGAGTTCGATGGAGGGGCTAGTCCGGTGCCCGGCAAACGACGTGCCTTTGTCTCCGGTAGGATTCCTGGAGCGAGCTGCCAAGGCCTACACTCACCGGACCTCGCTGATTTACGGCTCGCTGAAATTCACCTGGGGTCAAACCCATCACCGCTGCCTCAGATTAGCTTCCGCTCTGACCCAGCTGGGAATTTTCCCCGGTGATGTGGTTGCAACTTTGGCTCCCAATGTCCCAGCCATGTATGAGCTGCATTTTGCAGTTCCAATGGCTGGTGCAGTTCTCTGCACACTAAACTCACGCCTCGATTCGGCTATGATTTCTGTCCTGCTGAGTCATTCCAAGGCCAAAGTCGTCTTTGTGGATTACCAGTTACTTGAAATTGCCAATGGAGCACTTGATCTTCTTGCCCAAAAAACGGACACAAAACCACCTATTCTAGTTTTAATTGCCGATTCTGAGGGGTCTTCATCTTCCGAAGAATGTTTTTCGAGCACCTATGAATATGAAAGTCTTCTGGAAAAGGGACAGGTTGGATTTGAGATAAGAAGGCCAAAGAGTGAATGGGATCCTATCAGTGTGAATTATACGTCCGGCACAACATCCAGGCCAAAAGGGGTTGTTTATAGTCACCGGGGTGCCTATCTCAACTCCCTTGCTACGGTTCTGCTTCATGGAATCAACTCAATTCCGGTTTATATGTGGACCGTGCCTATGTTTCACTGCAATGGGTGGTGCCTCATTTGGGGGATGGCTGCTCAGGGTGGCACTAACATATGCCTCAGAAAAGTCAATCCGAAAGACATATTTGACAACATAGCTCTATACAATGTGACAAACATGGGAGGGGCACCAACTGTCTTGAACATGATTGTGAATTCACCAGTCAGTGACCGAAGGCCACTGCCTCACAAGGTGGAAATAATGACTGGAGGTTCACCGCCCCCTCCACAGATCCTCTACAAGATGGAAGAATTGGGTTTCGGAGTGCATCACTTATATGGTTTAACAGAAACTTATGGTCCCGGGACTTACTGCTCGTGGAAACCTGAGTGGGATTCTCTGCCTTTGGACGAAAGATCAAAGTTTAAAGCTCGACAAGGAGTGCAACATCTCGGTTTAGAAGGGGTTGACGTAAAAGATCCCGTCACCATGGAGAGTGTACCAGCTGATGGTAAAACAATGGGTGAAATTATGTTCAGGGGAAACACAGTTATGAGTGGTTATCTTAAGGACTTGAAAGCAACAGAGGAATCTTTCCGTGGTGGATGGTTTCGAAGCGGAGATCTAGCTGTGAAACATCCTGATAACTACATAGAAATGAAGGACCGGTTGAAGGACATAATCATATCTGGAGGAGAAAACATAAGCACGGTTGAGGTGGAAACAGTTTTGTTTAGCCATCCGGCAGTTCTTGAGGCTGCAGTTGTTGCACGGCCAGATGACCATTGGGGGCAGACTCCTTGTGCATTTGTGAAACTGAAGGATGGATTTGATCACATAAACGCTCAAGAACTGATCAAATTTTCCCGTGATCATTTGCCTCATTACATGGCTCCTCGGACAGTCATTTTCGATGACATACCGAAAACTGCAACCGGAAAGATACAAAAGTTTGTTCTGAGAGAAAAAGCAAAGGCATTGGGCAGCCTCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

600

Amino Acids

66.44

Weight (kDa)

7.35

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	71 - 457	1e-77	AMP-binding enzyme
AMP-binding_C	PF13193	507 - 582	2.5e-21	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17650
fragaria_vesca	FvH4_1g10560
malus_domestica	MD15G1233600.v1.1
prunus_persica	Prupe.7G179300_v2.0.a1
pyrus_communis	pycom15g20820
rosa_chinensis	RchiOBHm_Chr2g0097611 RchiOBHm_Chr2g0146681 RchiOBHm_Chr3g0449261 RchiOBHm_Chr3g0449271 RchiOBHm_Chr6g0268031
rosa_laevigata	RLG00000013936 RLG00000016728 RLG00000016729 RLG00000020214 RLG00000025843
rosa_multiflora	Rmu_sc0001839.1_g000028 Rmu_sc0001986.1_g000041 Rmu_sc0003567.1_g000017 Rmu_sc0004220.1_g000001 Rmu_sc0004874.1_g000003
rosa_roxburghii	Rroxscaffold_2G00099970 Rroxscaffold_2G00144660 Rroxscaffold_7G00200080
rosa_rugosa	Rorug02G0067800 Rorug02G0067900 Rorug02G0396000 Rorug02G0619100 Rorug02G0619300 Rorug06G0039100
rosa_samantha	Rh2AG114200 Rh2AG452500 Rh2BG116900 Rh2CG118900 Rh2CG439400 Rh2DG117900 Rh2DG474200 Rh3AG017300 Rh3BG017400 Rh3CG016400 Rh3DG017700 Rh6AG158400 Rh6BG162400 Rh6CG156000
rosa_wichuraiana	Rw0G015740 Rw2G008930 Rw2G036950 Rw3G001320 Rw6G013780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	171, 779, 876, 991
AccB7I	CCANNNNNTGG	2 cut(s)	413, 1313
AccBSI	CCGCTC	1 cut(s)	317
AccII	CGCG	1 cut(s)	134
AciI	CCGC	5 cut(s)	132, 295, 315, 1082, 1422
AclWI	GGATC	4 cut(s)	704, 717, 1090, 1277
AcoI	YGGCCR	1 cut(s)	1577
AcsI	RAATTY	4 cut(s)	269, 333, 1018, 1664
AcuI	CTGAAG	1 cut(s)	1643
AdeI	CACNNNGTG	1 cut(s)	1057
AfaI	GTAC	1 cut(s)	1305
AfiI	CCNNNNNNNGG	8 cut(s)	175, 413, 451, 559, 802, 886, 1313, 1477
AflII	CTTAAG	1 cut(s)	1370
AgeI	ACCGGT	1 cut(s)	1470
AgsI	TTSAA	4 cut(s)	521, 1006, 1381, 1477
AhdI	GACNNNNNGTC	1 cut(s)	69
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	3 cut(s)	210, 275, 746
AleI	CACNNNNGTG	1 cut(s)	777
AluBI	AGCT	8 cut(s)	221, 311, 328, 391, 962, 1235, 1310, 1433
AluI	AGCT	8 cut(s)	221, 311, 328, 391, 962, 1235, 1310, 1433
Alw21I	GWGCWC	2 cut(s)	538, 638
Alw26I	GTCTC	1 cut(s)	201
AlwI	GGATC	4 cut(s)	704, 717, 1090, 1277
Ama87I	CYCGRG	1 cut(s)	1166
AoxI	GGCC	6 cut(s)	228, 486, 692, 749, 1040, 1577
ApeKI	GCWGC	6 cut(s)	221, 297, 391, 896, 1562, 1788
ApoI	RAATTY	4 cut(s)	269, 333, 1018, 1664
AsiGI	ACCGGT	1 cut(s)	1470
Asp700I	GAANNNNTTC	1 cut(s)	654
AspLEI	GCGC	1 cut(s)	136
AspS9I	GGNCC	4 cut(s)	243, 846, 1163, 1468
AsuC2I	CCSGG	6 cut(s)	121, 176, 342, 776, 1167, 1168
AsuHPI	GGTGA	9 cut(s)	230, 265, 284, 356, 764, 1014, 1071, 1282, 1340
AsuII	TTCGAA	1 cut(s)	1417
AvaI	CYCGRG	1 cut(s)	1166
AvaII	GGWCC	4 cut(s)	243, 846, 1163, 1468
BaeGI	GKGCMC	2 cut(s)	176, 994
BaeI	ACNNNNGTAYC	2 cut(s)	1739, 1772
BamHI	GGATCC	1 cut(s)	709
BanI	GGYRCC	4 cut(s)	171, 779, 876, 991
BauI	CACGAG	1 cut(s)	1180
BbsI	GAAGAC	2 cut(s)	600, 647
Bbv12I	GWGCWC	2 cut(s)	538, 638
BbvI	GCAGC	5 cut(s)	208, 284, 378, 883, 1549
BceAI	ACGGC	4 cut(s)	39, 61, 274, 1592
BciT130I	CCWGG	3 cut(s)	212, 277, 748
BclI	TGATCA	3 cut(s)	1636, 1659, 1675
BcnI	CCSGG	6 cut(s)	121, 176, 342, 776, 1167, 1168
BcoDI	GTCTC	1 cut(s)	201
BfaI	CTAG	3 cut(s)	164, 581, 1430
BfmI	CTRYAG	1 cut(s)	1563
BfrI	CTTAAG	1 cut(s)	1370
BglII	AGATCT	1 cut(s)	1426
BisI	GCNGC	6 cut(s)	222, 298, 392, 897, 1563, 1789
BlsI	GCNGC	6 cut(s)	223, 299, 393, 898, 1564, 1790
Bme1390I	CCNGG	9 cut(s)	121, 176, 212, 277, 342, 748, 776, 1167, 1168
Bme18I	GGWCC	4 cut(s)	243, 846, 1163, 1468
BmeRI	GACNNNNNGTC	1 cut(s)	69
BmeT110I	CYCGRG	1 cut(s)	1166
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	4 cut(s)	243, 846, 1163, 1468
BmiI	GGNNCC	8 cut(s)	173, 366, 711, 781, 878, 993, 1165, 1698
BmrFI	CCNGG	9 cut(s)	121, 176, 212, 277, 342, 748, 776, 1167, 1168
BmsI	GCATC	1 cut(s)	1141
BpiI	GAAGAC	2 cut(s)	600, 647
BpmI	CTGGAG	3 cut(s)	233, 1092, 1515
Bpu10I	CCTNAGC	1 cut(s)	900
Bpu14I	TTCGAA	1 cut(s)	1417
BpuEI	CTTGAG	2 cut(s)	1577, 1635
BpuMI	CCSGG	6 cut(s)	121, 176, 342, 776, 1167, 1168
BsaJI	CCNNGG	9 cut(s)	225, 276, 340, 483, 775, 1166, 1293, 1402, 1700
BsaWI	WCCGGW	6 cut(s)	168, 199, 240, 832, 1470, 1739
BsaXI	ACNNNNNCTCC	2 cut(s)	349, 379
Bsc4I	CCNNNNNNNGG	8 cut(s)	175, 413, 451, 559, 802, 886, 1313, 1477
Bse118I	RCCGGY	1 cut(s)	1470
Bse1I	ACTGG	3 cut(s)	511, 1025, 1075
Bse3DI	GCAATG	1 cut(s)	874
BseBI	CCWGG	3 cut(s)	212, 277, 748
BseDI	CCNNGG	9 cut(s)	225, 276, 340, 483, 775, 1166, 1293, 1402, 1700
BseGI	GGATG	6 cut(s)	743, 897, 1415, 1441, 1543, 1633
BseLI	CCNNNNNNNGG	8 cut(s)	175, 413, 451, 559, 802, 886, 1313, 1477
BseMI	GCAATG	1 cut(s)	874
BseMII	CTCAG	7 cut(s)	316, 464, 591, 914, 937, 1182, 1754
BseNI	ACTGG	3 cut(s)	511, 1025, 1075
BseRI	GAGGAG	2 cut(s)	1512, 1689
BseSI	GKGCMC	2 cut(s)	176, 994
BseXI	GCAGC	5 cut(s)	208, 284, 378, 883, 1549
BseYI	CCCAGC	3 cut(s)	324, 328, 376
BsgI	GTGCAG	2 cut(s)	412, 438
Bsh1236I	CGCG	1 cut(s)	134
BshFI	GGCC	6 cut(s)	230, 488, 694, 751, 1042, 1579
BshNI	GGYRCC	4 cut(s)	171, 779, 876, 991
BshTI	ACCGGT	1 cut(s)	1470
BsiHKAI	GWGCWC	2 cut(s)	538, 638
BsiHKCI	CYCGRG	1 cut(s)	1166
BslFI	GGGAC	4 cut(s)	359, 681, 1149, 1183
BslI	CCNNNNNNNGG	8 cut(s)	175, 413, 451, 559, 802, 886, 1313, 1477
BsmAI	GTCTC	1 cut(s)	201
BsmFI	GGGAC	4 cut(s)	359, 681, 1149, 1183
BsnI	GGCC	6 cut(s)	230, 488, 694, 751, 1042, 1579
BsoBI	CYCGRG	1 cut(s)	1166
Bsp119I	TTCGAA	1 cut(s)	1417
Bsp1286I	GDGCHC	4 cut(s)	176, 538, 638, 994
Bsp143I	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
Bsp19I	CCATGG	1 cut(s)	1293
BspACI	CCGC	5 cut(s)	132, 295, 315, 1082, 1422
BspANI	GGCC	6 cut(s)	230, 488, 694, 751, 1042, 1579
BspCNI	CTCAG	7 cut(s)	315, 465, 592, 913, 936, 1183, 1755
BspFNI	CGCG	1 cut(s)	134
BspLI	GGNNCC	8 cut(s)	173, 366, 711, 781, 878, 993, 1165, 1698
BspMAI	CTGCAG	1 cut(s)	1567
BspPI	GGATC	4 cut(s)	704, 717, 1090, 1277
BspT104I	TTCGAA	1 cut(s)	1417
BspT107I	GGYRCC	4 cut(s)	171, 779, 876, 991
BspTI	CTTAAG	1 cut(s)	1370
BsrBI	CCGCTC	1 cut(s)	317
BsrDI	GCAATG	1 cut(s)	874
BsrFI	RCCGGY	1 cut(s)	1470
BsrI	ACTGG	3 cut(s)	511, 1025, 1075
BssAI	RCCGGY	1 cut(s)	1470
BssECI	CCNNGG	9 cut(s)	225, 276, 340, 483, 775, 1166, 1293, 1402, 1700
BssMI	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
BssSI	CACGAG	1 cut(s)	1180
BssT1I	CCWWGG	3 cut(s)	225, 483, 1293
Bst2BI	CACGAG	1 cut(s)	1180
Bst2UI	CCWGG	3 cut(s)	212, 277, 748
Bst4CI	ACNGT	8 cut(s)	67, 805, 850, 1000, 1354, 1516, 1531, 1708
BstAFI	CTTAAG	1 cut(s)	1370
BstAPI	GCANNNNNTGC	1 cut(s)	1571
BstBI	TTCGAA	1 cut(s)	1417
BstC8I	GCNNGC	2 cut(s)	219, 263
BstDEI	CTNAG	7 cut(s)	302, 473, 600, 900, 923, 1191, 1763
BstDSI	CCRYGG	2 cut(s)	1293, 1402
BstF5I	GGATG	6 cut(s)	743, 897, 1415, 1441, 1543, 1633
BstFNI	CGCG	1 cut(s)	134
BstHHI	GCGC	1 cut(s)	136
BstKTI	GATC	9 cut(s)	544, 712, 1098, 1223, 1285, 1429, 1639, 1662, 1678
BstMAI	GTCTC	1 cut(s)	201
BstMBI	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
BstMWI	GCNNNNNNNGC	4 cut(s)	227, 362, 533, 1571
BstNI	CCWGG	3 cut(s)	212, 277, 748
BstSCI	CCNGG	9 cut(s)	119, 174, 210, 275, 340, 746, 774, 1165, 1166
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	2 cut(s)	176, 994
BstUI	CGCG	1 cut(s)	134
BstV1I	GCAGC	5 cut(s)	208, 284, 378, 883, 1549
BstV2I	GAAGAC	2 cut(s)	600, 647
BstX2I	RGATCY	4 cut(s)	709, 1095, 1282, 1426
BstYI	RGATCY	4 cut(s)	709, 1095, 1282, 1426
BsuRI	GGCC	6 cut(s)	230, 488, 694, 751, 1042, 1579
BtgI	CCRYGG	2 cut(s)	1293, 1402
BtgZI	GCGATG	1 cut(s)	83
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	6 cut(s)	743, 897, 1415, 1441, 1543, 1633
BtsI	GCAGTG	2 cut(s)	862, 1043
BtsIMutI	CAGTG	4 cut(s)	724, 862, 1036, 1043
Cac8I	GCNNGC	2 cut(s)	219, 263
CfoI	GCGC	1 cut(s)	136
Cfr10I	RCCGGY	1 cut(s)	1470
Cfr13I	GGNCC	4 cut(s)	243, 846, 1163, 1468
Cfr9I	CCCGGG	1 cut(s)	1166
Csp6I	GTAC	1 cut(s)	1304
CspAI	ACCGGT	1 cut(s)	1470
CviAII	CATG	8 cut(s)	24, 144, 382, 815, 982, 1009, 1294, 1693
CviQI	GTAC	1 cut(s)	1304
DdeI	CTNAG	7 cut(s)	302, 473, 600, 900, 923, 1191, 1763
DpnI	GATC	9 cut(s)	543, 711, 1097, 1222, 1284, 1428, 1638, 1661, 1677
DpnII	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
DraI	TTTAAA	1 cut(s)	1231
DraIII	CACNNNGTG	1 cut(s)	1057
DriI	GACNNNNNGTC	1 cut(s)	69
EaeI	YGGCCR	1 cut(s)	1577
Eam1105I	GACNNNNNGTC	1 cut(s)	69
Eco130I	CCWWGG	3 cut(s)	225, 483, 1293
Eco147I	AGGCCT	1 cut(s)	230
Eco47I	GGWCC	4 cut(s)	243, 846, 1163, 1468
Eco57I	CTGAAG	1 cut(s)	1643
Eco88I	CYCGRG	1 cut(s)	1166
EcoRI	GAATTC	1 cut(s)	1018
EcoRII	CCWGG	3 cut(s)	210, 275, 746
EcoT14I	CCWWGG	3 cut(s)	225, 483, 1293
ErhI	CCWWGG	3 cut(s)	225, 483, 1293
FaeI	CATG	8 cut(s)	27, 147, 385, 818, 985, 1012, 1297, 1696
FaqI	GGGAC	4 cut(s)	359, 681, 1149, 1183
FatI	CATG	8 cut(s)	23, 143, 381, 814, 981, 1008, 1293, 1692
FauNDI	CATATG	1 cut(s)	917
FbaI	TGATCA	3 cut(s)	1636, 1659, 1675
Fnu4HI	GCNGC	6 cut(s)	222, 298, 392, 897, 1563, 1789
FokI	GGATG	6 cut(s)	730, 904, 1422, 1428, 1530, 1640
Fsp4HI	GCNGC	6 cut(s)	222, 298, 392, 897, 1563, 1789
FspBI	CTAG	3 cut(s)	164, 581, 1430
GlaI	GCGC	1 cut(s)	135
GluI	GCNGC	6 cut(s)	222, 298, 392, 897, 1563, 1789
GsaI	CCCAGC	3 cut(s)	328, 332, 380
GsuI	CTGGAG	3 cut(s)	233, 1092, 1515
HaeIII	GGCC	6 cut(s)	230, 488, 694, 751, 1042, 1579
HhaI	GCGC	1 cut(s)	136
Hin1II	CATG	8 cut(s)	27, 147, 385, 818, 985, 1012, 1297, 1696
Hin6I	GCGC	1 cut(s)	134
HinP1I	GCGC	1 cut(s)	134
HincII	GTYRAC	2 cut(s)	81, 1273
HindII	GTYRAC	2 cut(s)	81, 1273
HphI	GGTGA	9 cut(s)	230, 265, 284, 356, 764, 1014, 1071, 1282, 1340
Hpy166II	GTNNAC	5 cut(s)	81, 846, 1079, 1273, 1304
Hpy188I	TCNGA	9 cut(s)	305, 321, 601, 619, 926, 939, 1127, 1704, 1764
Hpy188III	TCNNGA	6 cut(s)	659, 1003, 1445, 1494, 1556, 1652
Hpy8I	GTNNAC	5 cut(s)	81, 846, 1079, 1273, 1304
Hpy99I	CGWCG	2 cut(s)	54, 188
HpyAV	CCTTC	6 cut(s)	684, 1032, 1259, 1459, 1471, 1618
HpyCH4III	ACNGT	8 cut(s)	67, 805, 850, 1000, 1354, 1516, 1531, 1708
HpyCH4IV	ACGT	3 cut(s)	186, 731, 1275
HpyF10VI	GCNNNNNNNGC	4 cut(s)	227, 362, 533, 1571
HpyF3I	CTNAG	7 cut(s)	302, 473, 600, 900, 923, 1191, 1763
HpySE526I	ACGT	3 cut(s)	186, 731, 1275
Hsp92II	CATG	8 cut(s)	27, 147, 385, 818, 985, 1012, 1297, 1696
HspAI	GCGC	1 cut(s)	134
Ksp22I	TGATCA	3 cut(s)	1636, 1659, 1675
Kzo9I	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
LmnI	GCTCC	4 cut(s)	214, 370, 533, 1702
Lsp1109I	GCAGC	5 cut(s)	208, 284, 378, 883, 1549
LweI	GCATC	1 cut(s)	1141
MaeI	CTAG	3 cut(s)	164, 581, 1430
MaeII	ACGT	3 cut(s)	186, 731, 1275
MaeIII	GTNAC	6 cut(s)	56, 513, 770, 973, 1031, 1288
MalI	GATC	9 cut(s)	543, 711, 1097, 1222, 1284, 1428, 1638, 1661, 1677
MbiI	CCGCTC	1 cut(s)	317
MboI	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
MboII	GAAGA	6 cut(s)	536, 600, 606, 632, 647, 1124
MflI	RGATCY	4 cut(s)	709, 1095, 1282, 1426
MhlI	GDGCHC	4 cut(s)	176, 538, 638, 994
MlyI	GAGTC	4 cut(s)	22, 149, 484, 1594
MmeI	TCCRAC	1 cut(s)	655
MroXI	GAANNNNTTC	1 cut(s)	654
MseI	TTAA	4 cut(s)	587, 1148, 1230, 1371
MslI	CAYNNNNRTG	6 cut(s)	777, 867, 1013, 1140, 1355, 1460
MspA1I	CMGCKG	3 cut(s)	297, 328, 1310
MspCI	CTTAAG	1 cut(s)	1370
MspR9I	CCNGG	9 cut(s)	121, 176, 212, 277, 342, 748, 776, 1167, 1168
MvaI	CCWGG	3 cut(s)	212, 277, 748
MvnI	CGCG	1 cut(s)	134
MwoI	GCNNNNNNNGC	4 cut(s)	227, 362, 533, 1571
NciI	CCSGG	6 cut(s)	121, 176, 342, 776, 1167, 1168
NcoI	CCATGG	1 cut(s)	1293
NdeI	CATATG	1 cut(s)	917
NdeII	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
NlaIII	CATG	8 cut(s)	27, 147, 385, 818, 985, 1012, 1297, 1696
NlaIV	GGNNCC	8 cut(s)	173, 366, 711, 781, 878, 993, 1165, 1698
NmuCI	GTSAC	5 cut(s)	56, 770, 973, 1031, 1288
NspV	TTCGAA	1 cut(s)	1417
OliI	CACNNNNGTG	1 cut(s)	777
PceI	AGGCCT	1 cut(s)	230
PdmI	GAANNNNTTC	1 cut(s)	654
PfeI	GAWTC	7 cut(s)	20, 207, 449, 596, 819, 1199, 1394
PflMI	CCANNNNNTGG	2 cut(s)	413, 1313
PfoI	TCCNGGA	2 cut(s)	119, 210
PinAI	ACCGGT	1 cut(s)	1470
PkrI	GCNGC	6 cut(s)	223, 299, 393, 898, 1564, 1790
PleI	GAGTC	4 cut(s)	22, 148, 483, 1594
PpsI	GAGTC	4 cut(s)	22, 148, 483, 1594
Psp6I	CCWGG	3 cut(s)	210, 275, 746
PspFI	CCCAGC	3 cut(s)	324, 328, 376
PspGI	CCWGG	3 cut(s)	210, 275, 746
PspN4I	GGNNCC	8 cut(s)	173, 366, 711, 781, 878, 993, 1165, 1698
PspPI	GGNCC	4 cut(s)	243, 846, 1163, 1468
PstI	CTGCAG	1 cut(s)	1567
PsuI	RGATCY	4 cut(s)	709, 1095, 1282, 1426
PvuII	CAGCTG	2 cut(s)	328, 1310
RsaI	GTAC	1 cut(s)	1305
RsaNI	GTAC	1 cut(s)	1304
RseI	CAYNNNNRTG	6 cut(s)	777, 867, 1013, 1140, 1355, 1460
SaqAI	TTAA	4 cut(s)	587, 1148, 1230, 1371
SatI	GCNGC	6 cut(s)	222, 298, 392, 897, 1563, 1789
Sau3AI	GATC	9 cut(s)	541, 709, 1095, 1220, 1282, 1426, 1636, 1659, 1675
Sau96I	GGNCC	4 cut(s)	243, 846, 1163, 1468
SchI	GAGTC	4 cut(s)	22, 149, 484, 1594
ScrFI	CCNGG	9 cut(s)	121, 176, 212, 277, 342, 748, 776, 1167, 1168
SduI	GDGCHC	4 cut(s)	176, 538, 638, 994
SfaNI	GCATC	1 cut(s)	1141
SfcI	CTRYAG	1 cut(s)	1563
SfuI	TTCGAA	1 cut(s)	1417
SinI	GGWCC	4 cut(s)	243, 846, 1163, 1468
SmaI	CCCGGG	1 cut(s)	1168
SmiMI	CAYNNNNRTG	6 cut(s)	777, 867, 1013, 1140, 1355, 1460
SmlI	CTYRAG	4 cut(s)	14, 1370, 1556, 1650
SmoI	CTYRAG	4 cut(s)	14, 1370, 1556, 1650
SseBI	AGGCCT	1 cut(s)	230
SsiI	CCGC	5 cut(s)	132, 295, 315, 1082, 1422
SspMI	CTAG	3 cut(s)	164, 581, 1430
StuI	AGGCCT	1 cut(s)	230
StyD4I	CCNGG	9 cut(s)	119, 174, 210, 275, 340, 746, 774, 1165, 1166
StyI	CCWWGG	3 cut(s)	225, 483, 1293
TaaI	ACNGT	8 cut(s)	67, 805, 850, 1000, 1354, 1516, 1531, 1708
TaiI	ACGT	3 cut(s)	189, 734, 1278
TaqI	TCGA	6 cut(s)	152, 447, 632, 1237, 1417, 1716
TaqII	GACCGA	1 cut(s)	1050
TfiI	GAWTC	7 cut(s)	20, 207, 449, 596, 819, 1199, 1394
Tru1I	TTAA	4 cut(s)	587, 1148, 1230, 1371
Tru9I	TTAA	4 cut(s)	587, 1148, 1230, 1371
TscAI	CASTG	4 cut(s)	724, 869, 1036, 1050
TseFI	GTSAC	5 cut(s)	56, 770, 973, 1031, 1288
TseI	GCWGC	6 cut(s)	221, 297, 391, 896, 1562, 1788
Tsp45I	GTSAC	5 cut(s)	56, 770, 973, 1031, 1288
TspDTI	ATGAA	7 cut(s)	12, 17, 600, 657, 663, 803, 1478
TspGWI	ACGGA	3 cut(s)	38, 575, 1391
TspMI	CCCGGG	1 cut(s)	1166
TspRI	CASTG	4 cut(s)	724, 869, 1036, 1050
Van91I	CCANNNNNTGG	2 cut(s)	413, 1313
Vha464I	CTTAAG	1 cut(s)	1370
VpaK11BI	GGWCC	4 cut(s)	243, 846, 1163, 1468
XapI	RAATTY	4 cut(s)	269, 333, 1018, 1664
XcmI	CCANNNNNNNNNTGG	2 cut(s)	702, 1587
XmaI	CCCGGG	1 cut(s)	1166
XmnI	GAANNNNTTC	1 cut(s)	654
XspI	CTAG	3 cut(s)	164, 581, 1430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.