Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001719

Physical Location & Seq

Genomic Coordinates Reverse (-)

68632716 .. 68634680

Gene Structure 1965 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG474200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGCTATGCACCACTTGCTCACGAACTCATGGACTCACCTAGTTTCCACTCTCAGTACGCGCTTTCACTTCACCACTCCCACTCATTCTTACCGTGTATACTGCTCTAACTCTTCTGGCATTAATAGTAACAACTCTGAGCATGAAGCGTTATGGAGTTCAAAGGAGGGTCTAGTTCTGTGCTCGGCAAATCACGTCCCTTTATCTCCAATAGGATTCTTGGAGCGAGCTGCAAAGGCCTACAGCGACAGGACCTCTGTAATCTATGGCTCTCTTAAATACACTTGGGCTCAAACCCATCAACGCTGCCTTAAATTAGCTTCTGCTCTCACCCAGCTGGGAATTTCTCGAGGTGATGTGATTGCAACTTTGGCACCAAATGTCCCGGCTATGCATGAGCTTCATTTTGCAGCTCCAATGGCTGGGGCAATTCTTTGTACCCTAAATGCACGCCTTGATTCAGCTATGATATCTGTTCTTCTTAGTCATTCTGAAGCTAAAATCGTCTTTGTTGATCACCAATTACTTGGAATTGTTGATGGAGCACTTGAATTACTTGCCGAAAAAGCTGTTTCAAAACCACCAATTGTAGTTGTAATTGCTGATTCTGATGAGTTATCTACCAGCTTTAGTTCAGAAACAAAACCAACTTATGAGTATGAAAGTCTTTTAGAGAGTGGAAATGGTGGATTTGAGATTAGGCGACCAAAGAGTGAATGGGATCCCATCAGTGTGAATTACACCTCTGGCACAACATCAAGGCCGAAAGGGGTTGTTTATAGTCATCGCGGTGCTTATTTAAATTCATTGGCCACAGTTTTGTTTCATGGAATAGGCTCAGTGCCTGTTTATCTGTGGACTGTGCCTATGTTCCATTGCAATGGATGGTGCCTCATTTGGGGTTTGGCAGCGCAGGGTGGTACTAATATTTGCCTCAGGAAAGTCACTCCAAAAGGCATATTCGACAATATTTCTCTACATAACGTGACACACATGGGAGGGGCACCAACTGTGCTGAACATGATTGTTAATTCGCCGGTGAATGATCAAATGCCACTTCCTCACAAGGTGGAAGTAATGACGGGCGGCTCACCTCCCCCGCCGCAGATCCTTTTCAAGATGGAAGAGATGGGTTTTGGGGTAACCCACATATATGGTCTCACAGAAACTTATGGTCCAGGGACATATTGCTCATGGAAACCTGAGTGGGACTCTCTGCCTTCAGATAAGAGATCGAAGCTTAAAGCTCGACAAGGGGTGCAACATGTTGGTTTGGAAGAGGTTGACATAAAAGATCCCGTCACTATGGAAAGTGTACCACCTGATGGCAAGACAATGGGTGAAATTATGTTCAGGGGAAACACTGTGATGAGTGGTTATCTTAAAGACTTGAAAGCAACAAAGAAAGCTTTTAAGGGTGGATGGTTTAGAAGTGGGGATTTAGCTGTGAAACATTCTGATAACTATATCGAAGTCAAGGATCGATTGAAGGATGTGATTATATCTGGTGGAGAGAACATAAGCACAGTTGAGGTTGAAACAGTTTTGTTTAGCCATCCAGCAGTTTTTGAGGCTGCAGTTGTTGCAAGGCCTGATAATCATTGGGGACAAACTCCTTGTGCATTTGTGAAATTGAAGGACGGCTTAGATGTGAATGCGCAAGAAATAATTGAGTTCTGCCGCGATCATATGCCTCATTACATGGCACCCCGGACAGTCATTTTCGATGATATACCAAAGACTTCAACAGGAAAGATACAAAAGTTCATTCTCAGAGAAAAAGCAAAAGTCTTGGGCAGTCTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

602

Amino Acids

66.12

Weight (kDa)

6.94

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	74 - 461	4.5e-79	AMP-binding enzyme
AMP-binding_C	PF13193	511 - 585	2.1e-21	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17650
fragaria_vesca	FvH4_1g10560
malus_domestica	MD15G1233600.v1.1
prunus_persica	Prupe.7G179300_v2.0.a1
pyrus_communis	pycom15g20820
rosa_chinensis	RchiOBHm_Chr2g0097611 RchiOBHm_Chr2g0146681 RchiOBHm_Chr3g0449261 RchiOBHm_Chr3g0449271 RchiOBHm_Chr6g0268031
rosa_laevigata	RLG00000013936 RLG00000016728 RLG00000016729 RLG00000020214 RLG00000025843
rosa_multiflora	Rmu_sc0001839.1_g000028 Rmu_sc0001986.1_g000041 Rmu_sc0003567.1_g000017 Rmu_sc0004220.1_g000001 Rmu_sc0004874.1_g000003
rosa_roxburghii	Rroxscaffold_2G00099970 Rroxscaffold_2G00144660 Rroxscaffold_7G00200080
rosa_rugosa	Rorug02G0067800 Rorug02G0067900 Rorug02G0396000 Rorug02G0619100 Rorug02G0619300 Rorug06G0039100
rosa_samantha	Rh2AG114200 Rh2AG452500 Rh2BG116900 Rh2CG118900 Rh2CG439400 Rh2DG117900 Rh2DG474200 Rh3AG017300 Rh3BG017400 Rh3CG016400 Rh3DG017700 Rh6AG158400 Rh6BG162400 Rh6CG156000
rosa_wichuraiana	Rw0G015740 Rw2G008930 Rw2G036950 Rw3G001320 Rw6G013780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1659
AccB1I	GGYRCC	4 cut(s)	373, 888, 1003, 1705
AccB7I	CCANNNNNTGG	2 cut(s)	422, 1325
AccI	GTMKAC	1 cut(s)	99
AccII	CGCG	3 cut(s)	61, 789, 1683
AciI	CCGC	5 cut(s)	789, 1086, 1100, 1103, 1681
AclWI	GGATC	5 cut(s)	716, 729, 1102, 1289, 1488
AcoI	YGGCCR	1 cut(s)	810
AcsI	RAATTY	2 cut(s)	342, 802
AcuI	CTGAAG	2 cut(s)	513, 1206
AdeI	CACNNNGTG	1 cut(s)	1069
AfaI	GTAC	4 cut(s)	58, 439, 922, 1317
AfiI	CCNNNNNNNGG	3 cut(s)	422, 898, 1325
AflIII	ACRYGT	1 cut(s)	1264
AgsI	TTSAA	9 cut(s)	162, 551, 576, 1117, 1393, 1489, 1538, 1636, 1746
AjiI	CACGTC	1 cut(s)	196
AjnI	CCWGG	1 cut(s)	1177
Alw21I	GWGCWC	2 cut(s)	185, 547
Alw26I	GTCTC	2 cut(s)	1163, 1805
AlwI	GGATC	5 cut(s)	716, 729, 1102, 1289, 1488
AlwNI	CAGNNNCTG	1 cut(s)	845
Ama87I	CYCGRG	1 cut(s)	348
AoxI	GGCC	4 cut(s)	237, 761, 810, 1589
ApeKI	GCWGC	5 cut(s)	230, 306, 410, 908, 1574
ApoI	RAATTY	2 cut(s)	342, 802
AseI	ATTAAT	1 cut(s)	123
AspLEI	GCGC	3 cut(s)	63, 913, 1660
AspS9I	GGNCC	2 cut(s)	252, 1175
AsuC2I	CCSGG	2 cut(s)	386, 1711
AsuHPI	GGTGA	8 cut(s)	29, 64, 322, 365, 509, 1051, 1083, 1352
AvaI	CYCGRG	1 cut(s)	348
AvaII	GGWCC	2 cut(s)	252, 1175
AxyI	CCTNAGG	1 cut(s)	935
BaeGI	GKGCMC	1 cut(s)	1006
BaeI	ACNNNNGTAYC	2 cut(s)	1748, 1781
BalI	TGGCCA	1 cut(s)	812
BamHI	GGATCC	1 cut(s)	721
BanI	GGYRCC	4 cut(s)	373, 888, 1003, 1705
BanII	GRGCYC	1 cut(s)	292
Bbv12I	GWGCWC	2 cut(s)	185, 547
BbvI	GCAGC	5 cut(s)	217, 293, 422, 920, 1561
BccI	CCATC	9 cut(s)	306, 533, 734, 879, 1114, 1123, 1319, 1416, 1563
BceAI	ACGGC	1 cut(s)	1657
BciT130I	CCWGG	1 cut(s)	1179
BclI	TGATCA	2 cut(s)	514, 1045
BcnI	CCSGG	2 cut(s)	386, 1711
BcoDI	GTCTC	2 cut(s)	1163, 1805
BfaI	CTAG	2 cut(s)	41, 173
BfmI	CTRYAG	2 cut(s)	241, 1575
BisI	GCNGC	8 cut(s)	231, 307, 411, 909, 1087, 1103, 1575, 1681
BlsI	GCNGC	8 cut(s)	232, 308, 412, 910, 1088, 1104, 1576, 1682
Bme1390I	CCNGG	3 cut(s)	386, 1179, 1711
Bme18I	GGWCC	2 cut(s)	252, 1175
BmeT110I	CYCGRG	1 cut(s)	348
BmgBI	CACGTC	1 cut(s)	196
BmgT120I	GGNCC	2 cut(s)	252, 1175
BmiI	GGNNCC	5 cut(s)	375, 723, 890, 1005, 1707
BmrFI	CCNGG	3 cut(s)	386, 1179, 1711
BplI	GAGNNNNNCTC	2 cut(s)	1196, 1228
BpuMI	CCSGG	2 cut(s)	386, 1711
Bsa29I	ATCGAT	1 cut(s)	1483
BsaI	GGTCTC	1 cut(s)	1163
BsaJI	CCNNGG	2 cut(s)	1178, 1709
Bsc4I	CCNNNNNNNGG	3 cut(s)	422, 898, 1325
Bse118I	RCCGGY	1 cut(s)	1036
Bse21I	CCTNAGG	1 cut(s)	935
Bse3DI	GCAATG	2 cut(s)	874, 886
BseBI	CCWGG	1 cut(s)	1179
BseCI	ATCGAT	1 cut(s)	1483
BseDI	CCNNGG	2 cut(s)	1178, 1709
BseGI	GGATG	4 cut(s)	890, 1427, 1498, 1555
BseLI	CCNNNNNNNGG	3 cut(s)	422, 898, 1325
BseMI	GCAATG	2 cut(s)	874, 886
BseMII	CTCAG	6 cut(s)	67, 129, 852, 949, 1194, 1786
BseSI	GKGCMC	1 cut(s)	1006
BseXI	GCAGC	5 cut(s)	217, 293, 422, 920, 1561
BseYI	CCCAGC	3 cut(s)	333, 337, 422
Bsh1236I	CGCG	3 cut(s)	61, 789, 1683
BshFI	GGCC	4 cut(s)	239, 763, 812, 1591
BshNI	GGYRCC	4 cut(s)	373, 888, 1003, 1705
BshVI	ATCGAT	1 cut(s)	1483
BsiHKAI	GWGCWC	2 cut(s)	185, 547
BsiHKCI	CYCGRG	1 cut(s)	348
BsiSI	CCGG	3 cut(s)	386, 1037, 1711
BslFI	GGGAC	5 cut(s)	182, 368, 1195, 1223, 1620
BslI	CCNNNNNNNGG	3 cut(s)	422, 898, 1325
BsmAI	GTCTC	2 cut(s)	1163, 1805
BsmFI	GGGAC	5 cut(s)	182, 368, 1195, 1223, 1620
BsmI	GAATGC	1 cut(s)	1660
BsnI	GGCC	4 cut(s)	239, 763, 812, 1591
Bso31I	GGTCTC	1 cut(s)	1163
BsoBI	CYCGRG	1 cut(s)	348
Bsp1286I	GDGCHC	4 cut(s)	185, 292, 547, 1006
Bsp143I	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
BspACI	CCGC	5 cut(s)	789, 1086, 1100, 1103, 1681
BspANI	GGCC	4 cut(s)	239, 763, 812, 1591
BspCNI	CTCAG	6 cut(s)	66, 130, 851, 948, 1195, 1785
BspDI	ATCGAT	1 cut(s)	1483
BspFNI	CGCG	3 cut(s)	61, 789, 1683
BspLI	GGNNCC	5 cut(s)	375, 723, 890, 1005, 1707
BspMAI	CTGCAG	1 cut(s)	1579
BspPI	GGATC	5 cut(s)	716, 729, 1102, 1289, 1488
BspT107I	GGYRCC	4 cut(s)	373, 888, 1003, 1705
BspTNI	GGTCTC	1 cut(s)	1163
BsrDI	GCAATG	2 cut(s)	874, 886
BsrFI	RCCGGY	1 cut(s)	1036
BssAI	RCCGGY	1 cut(s)	1036
BssECI	CCNNGG	2 cut(s)	1178, 1709
BssMI	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
BssNAI	GTATAC	1 cut(s)	100
Bst1107I	GTATAC	1 cut(s)	100
Bst2UI	CCWGG	1 cut(s)	1179
Bst4CI	ACNGT	8 cut(s)	95, 817, 862, 1012, 1366, 1528, 1543, 1717
Bst6I	CTCTTC	3 cut(s)	118, 1119, 1272
BstAPI	GCANNNNNTGC	2 cut(s)	16, 1583
BstC8I	GCNNGC	2 cut(s)	228, 451
BstDEI	CTNAG	8 cut(s)	53, 138, 482, 838, 935, 1203, 1645, 1772
BstEII	GGTNACC	1 cut(s)	1141
BstF5I	GGATG	4 cut(s)	890, 1427, 1498, 1555
BstFNI	CGCG	3 cut(s)	61, 789, 1683
BstHHI	GCGC	3 cut(s)	63, 913, 1660
BstKTI	GATC	8 cut(s)	517, 724, 1048, 1110, 1235, 1297, 1483, 1687
BstMAI	GTCTC	2 cut(s)	1163, 1805
BstMBI	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
BstMWI	GCNNNNNNNGC	6 cut(s)	16, 236, 371, 419, 566, 1583
BstNI	CCWGG	1 cut(s)	1179
BstNSI	RCATGY	1 cut(s)	1268
BstPI	GGTNACC	1 cut(s)	1141
BstSCI	CCNGG	3 cut(s)	384, 1177, 1709
BstSFI	CTRYAG	2 cut(s)	241, 1575
BstSLI	GKGCMC	1 cut(s)	1006
BstUI	CGCG	3 cut(s)	61, 789, 1683
BstV1I	GCAGC	5 cut(s)	217, 293, 422, 920, 1561
BstX2I	RGATCY	3 cut(s)	721, 1107, 1294
BstXI	CCANNNNNNTGG	3 cut(s)	527, 881, 1154
BstYI	RGATCY	3 cut(s)	721, 1107, 1294
BstZ17I	GTATAC	1 cut(s)	100
Bsu15I	ATCGAT	1 cut(s)	1483
Bsu36I	CCTNAGG	1 cut(s)	935
BsuRI	GGCC	4 cut(s)	239, 763, 812, 1591
BsuTUI	ATCGAT	1 cut(s)	1483
BtgZI	GCGATG	1 cut(s)	770
BtrI	CACGTC	1 cut(s)	196
BtsCI	GGATG	4 cut(s)	890, 1427, 1498, 1555
BtsIMutI	CAGTG	3 cut(s)	736, 846, 1362
Cac8I	GCNNGC	2 cut(s)	228, 451
CaiI	CAGNNNCTG	1 cut(s)	845
CfoI	GCGC	3 cut(s)	63, 913, 1660
Cfr10I	RCCGGY	1 cut(s)	1036
Cfr13I	GGNCC	2 cut(s)	252, 1175
ClaI	ATCGAT	1 cut(s)	1483
Csp6I	GTAC	4 cut(s)	57, 438, 921, 1316
CviAII	CATG	9 cut(s)	30, 143, 395, 827, 994, 1021, 1194, 1265, 1702
CviQI	GTAC	4 cut(s)	57, 438, 921, 1316
DdeI	CTNAG	8 cut(s)	53, 138, 482, 838, 935, 1203, 1645, 1772
DpnI	GATC	8 cut(s)	516, 723, 1047, 1109, 1234, 1296, 1482, 1686
DpnII	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
DraI	TTTAAA	1 cut(s)	801
DraIII	CACNNNGTG	1 cut(s)	1069
EaeI	YGGCCR	1 cut(s)	810
Eam1104I	CTCTTC	3 cut(s)	118, 1119, 1272
EarI	CTCTTC	3 cut(s)	118, 1119, 1272
Eco147I	AGGCCT	2 cut(s)	239, 1591
Eco24I	GRGCYC	1 cut(s)	292
Eco31I	GGTCTC	1 cut(s)	1163
Eco32I	GATATC	1 cut(s)	471
Eco47I	GGWCC	2 cut(s)	252, 1175
Eco57I	CTGAAG	2 cut(s)	513, 1206
Eco81I	CCTNAGG	1 cut(s)	935
Eco88I	CYCGRG	1 cut(s)	348
Eco91I	GGTNACC	1 cut(s)	1141
EcoO109I	RGGNCCY	1 cut(s)	252
EcoO65I	GGTNACC	1 cut(s)	1141
EcoRII	CCWGG	1 cut(s)	1177
EcoRV	GATATC	1 cut(s)	471
EcoT22I	ATGCAT	1 cut(s)	396
EcoT38I	GRGCYC	1 cut(s)	292
FaeI	CATG	9 cut(s)	33, 146, 398, 830, 997, 1024, 1197, 1268, 1705
FalI	AAGNNNNNCTT	2 cut(s)	1628, 1660
FaqI	GGGAC	5 cut(s)	182, 368, 1195, 1223, 1620
FatI	CATG	9 cut(s)	29, 142, 394, 826, 993, 1020, 1193, 1264, 1701
FauI	CCCGC	1 cut(s)	1107
FauNDI	CATATG	1 cut(s)	1689
FbaI	TGATCA	2 cut(s)	514, 1045
FblI	GTMKAC	1 cut(s)	99
Fnu4HI	GCNGC	8 cut(s)	231, 307, 411, 909, 1087, 1103, 1575, 1681
FokI	GGATG	4 cut(s)	897, 1434, 1505, 1542
FriOI	GRGCYC	1 cut(s)	292
Fsp4HI	GCNGC	8 cut(s)	231, 307, 411, 909, 1087, 1103, 1575, 1681
FspBI	CTAG	2 cut(s)	41, 173
FspI	TGCGCA	1 cut(s)	1659
GlaI	GCGC	3 cut(s)	62, 912, 1659
GluI	GCNGC	8 cut(s)	231, 307, 411, 909, 1087, 1103, 1575, 1681
GsaI	CCCAGC	3 cut(s)	337, 341, 426
HaeIII	GGCC	4 cut(s)	239, 763, 812, 1591
HapII	CCGG	3 cut(s)	386, 1037, 1711
HhaI	GCGC	3 cut(s)	63, 913, 1660
Hin1II	CATG	9 cut(s)	33, 146, 398, 830, 997, 1024, 1197, 1268, 1705
Hin6I	GCGC	3 cut(s)	61, 911, 1658
HinP1I	GCGC	3 cut(s)	61, 911, 1658
HincII	GTYRAC	1 cut(s)	1285
HindII	GTYRAC	1 cut(s)	1285
HindIII	AAGCTT	2 cut(s)	1238, 1407
HinfI	GANTC	5 cut(s)	34, 216, 458, 605, 1211
HpaII	CCGG	3 cut(s)	386, 1037, 1711
HphI	GGTGA	8 cut(s)	29, 64, 322, 365, 509, 1051, 1083, 1352
Hpy166II	GTNNAC	4 cut(s)	100, 858, 1285, 1316
Hpy188I	TCNGA	7 cut(s)	139, 493, 610, 637, 1225, 1459, 1775
Hpy188III	TCNNGA	5 cut(s)	22, 348, 937, 1117, 1806
Hpy8I	GTNNAC	4 cut(s)	100, 858, 1285, 1316
HpyAV	CCTTC	3 cut(s)	1230, 1483, 1630
HpyCH4III	ACNGT	8 cut(s)	95, 817, 862, 1012, 1366, 1528, 1543, 1717
HpyCH4IV	ACGT	2 cut(s)	195, 984
HpyF10VI	GCNNNNNNNGC	6 cut(s)	16, 236, 371, 419, 566, 1583
HpyF3I	CTNAG	8 cut(s)	53, 138, 482, 838, 935, 1203, 1645, 1772
HpySE526I	ACGT	2 cut(s)	195, 984
Hsp92II	CATG	9 cut(s)	33, 146, 398, 830, 997, 1024, 1197, 1268, 1705
HspAI	GCGC	3 cut(s)	61, 911, 1658
Ksp22I	TGATCA	2 cut(s)	514, 1045
Kzo9I	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
LmnI	GCTCC	3 cut(s)	223, 418, 542
Lsp1109I	GCAGC	5 cut(s)	217, 293, 422, 920, 1561
MaeI	CTAG	2 cut(s)	41, 173
MaeII	ACGT	2 cut(s)	195, 984
MaeIII	GTNAC	5 cut(s)	128, 943, 985, 1141, 1300
MalI	GATC	8 cut(s)	516, 723, 1047, 1109, 1234, 1296, 1482, 1686
MboI	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
MboII	GAAGA	4 cut(s)	105, 470, 1136, 1289
MfeI	CAATTG	1 cut(s)	585
MflI	RGATCY	3 cut(s)	721, 1107, 1294
MhlI	GDGCHC	4 cut(s)	185, 292, 547, 1006
MlsI	TGGCCA	1 cut(s)	812
MluNI	TGGCCA	1 cut(s)	812
MlyI	GAGTC	2 cut(s)	28, 1205
Mox20I	TGGCCA	1 cut(s)	812
Mph1103I	ATGCAT	1 cut(s)	396
MscI	TGGCCA	1 cut(s)	812
MseI	TTAA	8 cut(s)	123, 276, 312, 800, 1029, 1242, 1383, 1413
MslI	CAYNNNNRTG	5 cut(s)	731, 789, 879, 1152, 1367
Msp20I	TGGCCA	1 cut(s)	812
MspA1I	CMGCKG	1 cut(s)	337
MspI	CCGG	3 cut(s)	386, 1037, 1711
MspR9I	CCNGG	3 cut(s)	386, 1179, 1711
MunI	CAATTG	1 cut(s)	585
Mva1269I	GAATGC	1 cut(s)	1660
MvaI	CCWGG	1 cut(s)	1179
MvnI	CGCG	3 cut(s)	61, 789, 1683
MwoI	GCNNNNNNNGC	6 cut(s)	16, 236, 371, 419, 566, 1583
NciI	CCSGG	2 cut(s)	386, 1711
NdeI	CATATG	1 cut(s)	1689
NdeII	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
NlaIII	CATG	9 cut(s)	33, 146, 398, 830, 997, 1024, 1197, 1268, 1705
NlaIV	GGNNCC	5 cut(s)	375, 723, 890, 1005, 1707
NmeAIII	GCCGAG	1 cut(s)	164
NmuCI	GTSAC	3 cut(s)	943, 985, 1300
NsbI	TGCGCA	1 cut(s)	1659
NsiI	ATGCAT	1 cut(s)	396
NspI	RCATGY	1 cut(s)	1268
PaeR7I	CTCGAG	1 cut(s)	348
PceI	AGGCCT	2 cut(s)	239, 1591
PciI	ACATGT	1 cut(s)	1264
PctI	GAATGC	1 cut(s)	1660
PfeI	GAWTC	3 cut(s)	216, 458, 605
PflMI	CCANNNNNTGG	2 cut(s)	422, 1325
PkrI	GCNGC	8 cut(s)	232, 308, 412, 910, 1088, 1104, 1576, 1682
PleI	GAGTC	2 cut(s)	28, 1205
PpsI	GAGTC	2 cut(s)	28, 1205
PpuMI	RGGWCCY	1 cut(s)	252
PscI	ACATGT	1 cut(s)	1264
PshBI	ATTAAT	1 cut(s)	123
Psp5II	RGGWCCY	1 cut(s)	252
Psp6I	CCWGG	1 cut(s)	1177
PspEI	GGTNACC	1 cut(s)	1141
PspFI	CCCAGC	3 cut(s)	333, 337, 422
PspGI	CCWGG	1 cut(s)	1177
PspN4I	GGNNCC	5 cut(s)	375, 723, 890, 1005, 1707
PspPI	GGNCC	2 cut(s)	252, 1175
PspPPI	RGGWCCY	1 cut(s)	252
PstI	CTGCAG	1 cut(s)	1579
PstNI	CAGNNNCTG	1 cut(s)	845
PsuI	RGATCY	3 cut(s)	721, 1107, 1294
PvuII	CAGCTG	1 cut(s)	337
RsaI	GTAC	4 cut(s)	58, 439, 922, 1317
RsaNI	GTAC	4 cut(s)	57, 438, 921, 1316
RseI	CAYNNNNRTG	5 cut(s)	731, 789, 879, 1152, 1367
SaqAI	TTAA	8 cut(s)	123, 276, 312, 800, 1029, 1242, 1383, 1413
SatI	GCNGC	8 cut(s)	231, 307, 411, 909, 1087, 1103, 1575, 1681
Sau3AI	GATC	8 cut(s)	514, 721, 1045, 1107, 1232, 1294, 1480, 1684
Sau96I	GGNCC	2 cut(s)	252, 1175
SchI	GAGTC	2 cut(s)	28, 1205
ScrFI	CCNGG	3 cut(s)	386, 1179, 1711
SduI	GDGCHC	4 cut(s)	185, 292, 547, 1006
SfcI	CTRYAG	2 cut(s)	241, 1575
Sfr274I	CTCGAG	1 cut(s)	348
SgrAI	CRCCGGYG	1 cut(s)	1036
SinI	GGWCC	2 cut(s)	252, 1175
SlaI	CTCGAG	1 cut(s)	348
SmiI	ATTTAAAT	1 cut(s)	801
SmiMI	CAYNNNNRTG	5 cut(s)	731, 789, 879, 1152, 1367
SmlI	CTYRAG	1 cut(s)	348
SmoI	CTYRAG	1 cut(s)	348
SseBI	AGGCCT	2 cut(s)	239, 1591
SsiI	CCGC	5 cut(s)	789, 1086, 1100, 1103, 1681
SspI	AATATT	2 cut(s)	928, 970
SspMI	CTAG	2 cut(s)	41, 173
StuI	AGGCCT	2 cut(s)	239, 1591
StyD4I	CCNGG	3 cut(s)	384, 1177, 1709
SwaI	ATTTAAAT	1 cut(s)	801
TaaI	ACNGT	8 cut(s)	95, 817, 862, 1012, 1366, 1528, 1543, 1717
TaiI	ACGT	2 cut(s)	198, 987
TaqI	TCGA	7 cut(s)	349, 963, 1235, 1249, 1470, 1483, 1725
TauI	GCSGC	3 cut(s)	1089, 1105, 1683
TfiI	GAWTC	3 cut(s)	216, 458, 605
Tru1I	TTAA	8 cut(s)	123, 276, 312, 800, 1029, 1242, 1383, 1413
Tru9I	TTAA	8 cut(s)	123, 276, 312, 800, 1029, 1242, 1383, 1413
TscAI	CASTG	3 cut(s)	736, 846, 1369
TseFI	GTSAC	3 cut(s)	943, 985, 1300
TseI	GCWGC	5 cut(s)	230, 306, 410, 908, 1574
Tsp45I	GTSAC	3 cut(s)	943, 985, 1300
TspDTI	ATGAA	6 cut(s)	159, 392, 675, 795, 815, 1756
TspRI	CASTG	3 cut(s)	736, 846, 1369
Van91I	CCANNNNNTGG	2 cut(s)	422, 1325
VpaK11BI	GGWCC	2 cut(s)	252, 1175
VspI	ATTAAT	1 cut(s)	123
XapI	RAATTY	2 cut(s)	342, 802
XceI	RCATGY	1 cut(s)	1268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	714
XhoI	CTCGAG	1 cut(s)	348
XmiI	GTMKAC	1 cut(s)	99
XspI	CTAG	2 cut(s)	41, 173
Zsp2I	ATGCAT	1 cut(s)	396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.