acyl-activating enzyme
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17650 |
| fragaria_vesca | FvH4_1g10560 |
| malus_domestica | MD15G1233600.v1.1 |
| prunus_persica | Prupe.7G179300_v2.0.a1 |
| pyrus_communis | pycom15g20820 |
| rosa_chinensis | RchiOBHm_Chr2g0097611 RchiOBHm_Chr2g0146681 RchiOBHm_Chr3g0449261 RchiOBHm_Chr3g0449271 RchiOBHm_Chr6g0268031 |
| rosa_laevigata | RLG00000013936 RLG00000016728 RLG00000016729 RLG00000020214 RLG00000025843 |
| rosa_multiflora | Rmu_sc0001839.1_g000028 Rmu_sc0001986.1_g000041 Rmu_sc0003567.1_g000017 Rmu_sc0004220.1_g000001 Rmu_sc0004874.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00099970 Rroxscaffold_2G00144660 Rroxscaffold_7G00200080 |
| rosa_rugosa | Rorug02G0067800 Rorug02G0067900 Rorug02G0396000 Rorug02G0619100 Rorug02G0619300 Rorug06G0039100 |
| rosa_samantha | Rh2AG114200 Rh2AG452500 Rh2BG116900 Rh2CG118900 Rh2CG439400 Rh2DG117900 Rh2DG474200 Rh3AG017300 Rh3BG017400 Rh3CG016400 Rh3DG017700 Rh6AG158400 Rh6BG162400 Rh6CG156000 |
| rosa_wichuraiana | Rw0G015740 Rw2G008930 Rw2G036950 Rw3G001320 Rw6G013780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1989 |
| AccB1I | GGYRCC | 4 cut(s) | 703, 1218, 1333, 2035 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 752, 1655 |
| AccII | CGCG | 3 cut(s) | 417, 1119, 2013 |
| AclWI | GGATC | 7 cut(s) | 35, 306, 1046, 1059, 1432, 1619, 1818 |
| AcoI | YGGCCR | 1 cut(s) | 1140 |
| AcsI | RAATTY | 3 cut(s) | 452, 672, 1132 |
| AcuI | CTGAAG | 3 cut(s) | 329, 843, 1536 |
| AdeI | CACNNNGTG | 1 cut(s) | 1399 |
| AfaI | GTAC | 5 cut(s) | 9, 388, 769, 1252, 1647 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 752, 1228, 1655 |
| AflIII | ACRYGT | 2 cut(s) | 1479, 1594 |
| AjiI | CACGTC | 1 cut(s) | 526 |
| AjnI | CCWGG | 1 cut(s) | 1507 |
| Alw21I | GWGCWC | 3 cut(s) | 20, 515, 877 |
| Alw26I | GTCTC | 2 cut(s) | 1493, 2135 |
| AlwI | GGATC | 7 cut(s) | 35, 306, 1046, 1059, 1432, 1619, 1818 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 678 |
| AoxI | GGCC | 5 cut(s) | 30, 440, 567, 1091, 1140 |
| ApeKI | GCWGC | 5 cut(s) | 560, 636, 740, 1238, 1904 |
| ApoI | RAATTY | 3 cut(s) | 452, 672, 1132 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 437, 469 |
| AspLEI | GCGC | 3 cut(s) | 293, 1243, 1990 |
| AspS9I | GGNCC | 3 cut(s) | 441, 582, 1505 |
| AsuC2I | CCSGG | 2 cut(s) | 716, 2041 |
| AsuHPI | GGTGA | 6 cut(s) | 652, 695, 839, 1381, 1413, 1682 |
| AvaI | CYCGRG | 1 cut(s) | 678 |
| AvaII | GGWCC | 2 cut(s) | 582, 1505 |
| AxyI | CCTNAGG | 1 cut(s) | 1265 |
| BaeGI | GKGCMC | 1 cut(s) | 1336 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2078, 2111 |
| BalI | TGGCCA | 1 cut(s) | 1142 |
| BamHI | GGATCC | 1 cut(s) | 1051 |
| BanI | GGYRCC | 4 cut(s) | 703, 1218, 1333, 2035 |
| BanII | GRGCYC | 3 cut(s) | 20, 339, 622 |
| Bbv12I | GWGCWC | 3 cut(s) | 20, 515, 877 |
| BbvI | GCAGC | 5 cut(s) | 547, 623, 752, 1250, 1891 |
| BccI | CCATC | 9 cut(s) | 636, 863, 1064, 1209, 1444, 1453, 1649, 1746, 1893 |
| BceAI | ACGGC | 1 cut(s) | 1987 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1283, 1317 |
| BciT130I | CCWGG | 1 cut(s) | 1509 |
| BclI | TGATCA | 2 cut(s) | 844, 1375 |
| BcnI | CCSGG | 2 cut(s) | 716, 2041 |
| BcoDI | GTCTC | 2 cut(s) | 1493, 2135 |
| BfaI | CTAG | 1 cut(s) | 503 |
| BfmI | CTRYAG | 2 cut(s) | 571, 1905 |
| BfoI | RGCGCY | 1 cut(s) | 294 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BlpI | GCTNAGC | 1 cut(s) | 19 |
| Bme1390I | CCNGG | 3 cut(s) | 716, 1509, 2041 |
| Bme18I | GGWCC | 2 cut(s) | 582, 1505 |
| BmeT110I | CYCGRG | 1 cut(s) | 678 |
| BmgBI | CACGTC | 1 cut(s) | 526 |
| BmgT120I | GGNCC | 3 cut(s) | 441, 582, 1505 |
| BmiI | GGNNCC | 5 cut(s) | 705, 1053, 1220, 1335, 2037 |
| BmrFI | CCNGG | 3 cut(s) | 716, 1509, 2041 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1526, 1558 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 1919 |
| BpuMI | CCSGG | 2 cut(s) | 716, 2041 |
| Bsa29I | ATCGAT | 1 cut(s) | 1813 |
| BsaBI | GATNNNNATC | 1 cut(s) | 45 |
| BsaI | GGTCTC | 1 cut(s) | 1493 |
| BsaJI | CCNNGG | 2 cut(s) | 1508, 2039 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 752, 1228, 1655 |
| Bse118I | RCCGGY | 2 cut(s) | 438, 1366 |
| Bse21I | CCTNAGG | 1 cut(s) | 1265 |
| Bse3DI | GCAATG | 2 cut(s) | 1204, 1216 |
| Bse8I | GATNNNNATC | 1 cut(s) | 45 |
| BseBI | CCWGG | 1 cut(s) | 1509 |
| BseCI | ATCGAT | 1 cut(s) | 1813 |
| BseDI | CCNNGG | 2 cut(s) | 1508, 2039 |
| BseGI | GGATG | 5 cut(s) | 114, 1220, 1757, 1828, 1885 |
| BseJI | GATNNNNATC | 1 cut(s) | 45 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 752, 1228, 1655 |
| BseMI | GCAATG | 2 cut(s) | 1204, 1216 |
| BseMII | CTCAG | 7 cut(s) | 33, 41, 459, 1182, 1279, 1524, 2116 |
| BseSI | GKGCMC | 1 cut(s) | 1336 |
| BseXI | GCAGC | 5 cut(s) | 547, 623, 752, 1250, 1891 |
| BseYI | CCCAGC | 3 cut(s) | 663, 667, 752 |
| BsgI | GTGCAG | 1 cut(s) | 242 |
| Bsh1236I | CGCG | 3 cut(s) | 417, 1119, 2013 |
| BshFI | GGCC | 5 cut(s) | 32, 442, 569, 1093, 1142 |
| BshNI | GGYRCC | 4 cut(s) | 703, 1218, 1333, 2035 |
| BshVI | ATCGAT | 1 cut(s) | 1813 |
| BsiHKAI | GWGCWC | 3 cut(s) | 20, 515, 877 |
| BsiHKCI | CYCGRG | 1 cut(s) | 678 |
| BsiSI | CCGG | 4 cut(s) | 439, 716, 1367, 2041 |
| BslFI | GGGAC | 6 cut(s) | 74, 512, 698, 1525, 1553, 1950 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 752, 1228, 1655 |
| BsmAI | GTCTC | 2 cut(s) | 1493, 2135 |
| BsmFI | GGGAC | 6 cut(s) | 74, 512, 698, 1525, 1553, 1950 |
| BsmI | GAATGC | 1 cut(s) | 1990 |
| BsnI | GGCC | 5 cut(s) | 32, 442, 569, 1093, 1142 |
| Bso31I | GGTCTC | 1 cut(s) | 1493 |
| BsoBI | CYCGRG | 1 cut(s) | 678 |
| Bsp1286I | GDGCHC | 6 cut(s) | 20, 339, 515, 622, 877, 1336 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 19 |
| BspANI | GGCC | 5 cut(s) | 32, 442, 569, 1093, 1142 |
| BspCNI | CTCAG | 7 cut(s) | 32, 42, 460, 1181, 1278, 1525, 2115 |
| BspDI | ATCGAT | 1 cut(s) | 1813 |
| BspFNI | CGCG | 3 cut(s) | 417, 1119, 2013 |
| BspLI | GGNNCC | 5 cut(s) | 705, 1053, 1220, 1335, 2037 |
| BspMAI | CTGCAG | 1 cut(s) | 1909 |
| BspPI | GGATC | 7 cut(s) | 35, 306, 1046, 1059, 1432, 1619, 1818 |
| BspQI | GCTCTTC | 1 cut(s) | 8 |
| BspT107I | GGYRCC | 4 cut(s) | 703, 1218, 1333, 2035 |
| BspTNI | GGTCTC | 1 cut(s) | 1493 |
| BsrDI | GCAATG | 2 cut(s) | 1204, 1216 |
| BsrFI | RCCGGY | 2 cut(s) | 438, 1366 |
| BssAI | RCCGGY | 2 cut(s) | 438, 1366 |
| BssECI | CCNNGG | 2 cut(s) | 1508, 2039 |
| Bst2UI | CCWGG | 1 cut(s) | 1509 |
| Bst4CI | ACNGT | 8 cut(s) | 169, 1147, 1192, 1342, 1696, 1858, 1873, 2047 |
| Bst6I | CTCTTC | 5 cut(s) | 8, 21, 153, 1449, 1602 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1913 |
| BstC8I | GCNNGC | 2 cut(s) | 558, 781 |
| BstEII | GGTNACC | 1 cut(s) | 1471 |
| BstF5I | GGATG | 5 cut(s) | 114, 1220, 1757, 1828, 1885 |
| BstFNI | CGCG | 3 cut(s) | 417, 1119, 2013 |
| BstH2I | RGCGCY | 1 cut(s) | 294 |
| BstHHI | GCGC | 3 cut(s) | 293, 1243, 1990 |
| BstMAI | GTCTC | 2 cut(s) | 1493, 2135 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 29, 566, 701, 749, 896, 1913 |
| BstNI | CCWGG | 1 cut(s) | 1509 |
| BstNSI | RCATGY | 2 cut(s) | 1483, 1598 |
| BstPI | GGTNACC | 1 cut(s) | 1471 |
| BstSCI | CCNGG | 3 cut(s) | 714, 1507, 2039 |
| BstSFI | CTRYAG | 2 cut(s) | 571, 1905 |
| BstSLI | GKGCMC | 1 cut(s) | 1336 |
| BstUI | CGCG | 3 cut(s) | 417, 1119, 2013 |
| BstV1I | GCAGC | 5 cut(s) | 547, 623, 752, 1250, 1891 |
| BstX2I | RGATCY | 3 cut(s) | 1051, 1437, 1624 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 857, 1211, 1484 |
| BstYI | RGATCY | 3 cut(s) | 1051, 1437, 1624 |
| Bsu15I | ATCGAT | 1 cut(s) | 1813 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1265 |
| BsuRI | GGCC | 5 cut(s) | 32, 442, 569, 1093, 1142 |
| BsuTUI | ATCGAT | 1 cut(s) | 1813 |
| BtgZI | GCGATG | 1 cut(s) | 1100 |
| BtrI | CACGTC | 1 cut(s) | 526 |
| BtsCI | GGATG | 5 cut(s) | 114, 1220, 1757, 1828, 1885 |
| BtsIMutI | CAGTG | 3 cut(s) | 1066, 1176, 1692 |
| Cac8I | GCNNGC | 2 cut(s) | 558, 781 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1175 |
| CfoI | GCGC | 3 cut(s) | 293, 1243, 1990 |
| Cfr10I | RCCGGY | 2 cut(s) | 438, 1366 |
| Cfr13I | GGNCC | 3 cut(s) | 441, 582, 1505 |
| ClaI | ATCGAT | 1 cut(s) | 1813 |
| Csp6I | GTAC | 5 cut(s) | 8, 387, 768, 1251, 1646 |
| CviAII | CATG | 8 cut(s) | 473, 725, 1324, 1351, 1480, 1524, 1595, 2032 |
| CviQI | GTAC | 5 cut(s) | 8, 387, 768, 1251, 1646 |
| DraI | TTTAAA | 1 cut(s) | 1131 |
| DraIII | CACNNNGTG | 1 cut(s) | 1399 |
| EaeI | YGGCCR | 1 cut(s) | 1140 |
| Eam1104I | CTCTTC | 5 cut(s) | 8, 21, 153, 1449, 1602 |
| EarI | CTCTTC | 5 cut(s) | 8, 21, 153, 1449, 1602 |
| Ecl136II | GAGCTC | 1 cut(s) | 18 |
| Eco147I | AGGCCT | 2 cut(s) | 32, 569 |
| Eco24I | GRGCYC | 3 cut(s) | 20, 339, 622 |
| Eco31I | GGTCTC | 1 cut(s) | 1493 |
| Eco32I | GATATC | 1 cut(s) | 801 |
| Eco47I | GGWCC | 2 cut(s) | 582, 1505 |
| Eco53kI | GAGCTC | 1 cut(s) | 18 |
| Eco57I | CTGAAG | 3 cut(s) | 329, 843, 1536 |
| Eco81I | CCTNAGG | 1 cut(s) | 1265 |
| Eco88I | CYCGRG | 1 cut(s) | 678 |
| Eco91I | GGTNACC | 1 cut(s) | 1471 |
| EcoICRI | GAGCTC | 1 cut(s) | 18 |
| EcoO109I | RGGNCCY | 1 cut(s) | 582 |
| EcoO65I | GGTNACC | 1 cut(s) | 1471 |
| EcoRII | CCWGG | 1 cut(s) | 1507 |
| EcoRV | GATATC | 1 cut(s) | 801 |
| EcoT22I | ATGCAT | 1 cut(s) | 726 |
| EcoT38I | GRGCYC | 3 cut(s) | 20, 339, 622 |
| FaeI | CATG | 8 cut(s) | 476, 728, 1327, 1354, 1483, 1527, 1598, 2035 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1958, 1990 |
| FaqI | GGGAC | 6 cut(s) | 74, 512, 698, 1525, 1553, 1950 |
| FatI | CATG | 8 cut(s) | 472, 724, 1323, 1350, 1479, 1523, 1594, 2031 |
| FauI | CCCGC | 1 cut(s) | 1437 |
| FauNDI | CATATG | 1 cut(s) | 2019 |
| FbaI | TGATCA | 2 cut(s) | 844, 1375 |
| FokI | GGATG | 5 cut(s) | 101, 1227, 1764, 1835, 1872 |
| FriOI | GRGCYC | 3 cut(s) | 20, 339, 622 |
| FspBI | CTAG | 1 cut(s) | 503 |
| FspI | TGCGCA | 1 cut(s) | 1989 |
| GlaI | GCGC | 3 cut(s) | 292, 1242, 1989 |
| GsaI | CCCAGC | 3 cut(s) | 667, 671, 756 |
| HaeII | RGCGCY | 1 cut(s) | 294 |
| HaeIII | GGCC | 5 cut(s) | 32, 442, 569, 1093, 1142 |
| HapII | CCGG | 4 cut(s) | 439, 716, 1367, 2041 |
| HhaI | GCGC | 3 cut(s) | 293, 1243, 1990 |
| Hin1II | CATG | 8 cut(s) | 476, 728, 1327, 1354, 1483, 1527, 1598, 2035 |
| Hin6I | GCGC | 3 cut(s) | 291, 1241, 1988 |
| HinP1I | GCGC | 3 cut(s) | 291, 1241, 1988 |
| HincII | GTYRAC | 1 cut(s) | 1615 |
| HindII | GTYRAC | 1 cut(s) | 1615 |
| HindIII | AAGCTT | 2 cut(s) | 1568, 1737 |
| HinfI | GANTC | 4 cut(s) | 546, 788, 935, 1541 |
| HpaII | CCGG | 4 cut(s) | 439, 716, 1367, 2041 |
| HphI | GGTGA | 6 cut(s) | 652, 695, 839, 1381, 1413, 1682 |
| Hpy166II | GTNNAC | 6 cut(s) | 109, 172, 768, 1188, 1615, 1646 |
| Hpy188I | TCNGA | 9 cut(s) | 51, 199, 469, 823, 940, 967, 1555, 1789, 2105 |
| Hpy188III | TCNNGA | 8 cut(s) | 38, 44, 76, 678, 1267, 1447, 1898, 2136 |
| Hpy8I | GTNNAC | 6 cut(s) | 109, 172, 768, 1188, 1615, 1646 |
| Hpy99I | CGWCG | 2 cut(s) | 394, 404 |
| HpyAV | CCTTC | 6 cut(s) | 259, 317, 353, 1560, 1813, 1960 |
| HpyCH4III | ACNGT | 8 cut(s) | 169, 1147, 1192, 1342, 1696, 1858, 1873, 2047 |
| HpyCH4IV | ACGT | 3 cut(s) | 87, 525, 1314 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 29, 566, 701, 749, 896, 1913 |
| HpySE526I | ACGT | 3 cut(s) | 87, 525, 1314 |
| Hsp92II | CATG | 8 cut(s) | 476, 728, 1327, 1354, 1483, 1527, 1598, 2035 |
| HspAI | GCGC | 3 cut(s) | 291, 1241, 1988 |
| Ksp22I | TGATCA | 2 cut(s) | 844, 1375 |
| LguI | GCTCTTC | 1 cut(s) | 8 |
| LmnI | GCTCC | 4 cut(s) | 224, 553, 748, 872 |
| Lsp1109I | GCAGC | 5 cut(s) | 547, 623, 752, 1250, 1891 |
| MaeI | CTAG | 1 cut(s) | 503 |
| MaeII | ACGT | 3 cut(s) | 87, 525, 1314 |
| MaeIII | GTNAC | 5 cut(s) | 458, 1273, 1315, 1471, 1630 |
| MboII | GAAGA | 6 cut(s) | 25, 38, 170, 800, 1466, 1619 |
| MfeI | CAATTG | 1 cut(s) | 915 |
| MflI | RGATCY | 3 cut(s) | 1051, 1437, 1624 |
| MhlI | GDGCHC | 6 cut(s) | 20, 339, 515, 622, 877, 1336 |
| MlsI | TGGCCA | 1 cut(s) | 1142 |
| MluNI | TGGCCA | 1 cut(s) | 1142 |
| MlyI | GAGTC | 1 cut(s) | 1535 |
| Mox20I | TGGCCA | 1 cut(s) | 1142 |
| Mph1103I | ATGCAT | 1 cut(s) | 726 |
| MscI | TGGCCA | 1 cut(s) | 1142 |
| MseI | TTAA | 7 cut(s) | 606, 642, 1130, 1359, 1572, 1713, 1743 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1061, 1119, 1209, 1482, 1697 |
| Msp20I | TGGCCA | 1 cut(s) | 1142 |
| MspA1I | CMGCKG | 1 cut(s) | 667 |
| MspI | CCGG | 4 cut(s) | 439, 716, 1367, 2041 |
| MspR9I | CCNGG | 3 cut(s) | 716, 1509, 2041 |
| MunI | CAATTG | 1 cut(s) | 915 |
| Mva1269I | GAATGC | 1 cut(s) | 1990 |
| MvaI | CCWGG | 1 cut(s) | 1509 |
| MvnI | CGCG | 3 cut(s) | 417, 1119, 2013 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 29, 566, 701, 749, 896, 1913 |
| NciI | CCSGG | 2 cut(s) | 716, 2041 |
| NdeI | CATATG | 1 cut(s) | 2019 |
| NlaIII | CATG | 8 cut(s) | 476, 728, 1327, 1354, 1483, 1527, 1598, 2035 |
| NlaIV | GGNNCC | 5 cut(s) | 705, 1053, 1220, 1335, 2037 |
| NmeAIII | GCCGAG | 2 cut(s) | 292, 494 |
| NmuCI | GTSAC | 3 cut(s) | 1273, 1315, 1630 |
| NsbI | TGCGCA | 1 cut(s) | 1989 |
| NsiI | ATGCAT | 1 cut(s) | 726 |
| NspI | RCATGY | 2 cut(s) | 1483, 1598 |
| PaeR7I | CTCGAG | 1 cut(s) | 678 |
| PceI | AGGCCT | 2 cut(s) | 32, 569 |
| PciI | ACATGT | 2 cut(s) | 1479, 1594 |
| PciSI | GCTCTTC | 1 cut(s) | 8 |
| PctI | GAATGC | 1 cut(s) | 1990 |
| PfeI | GAWTC | 3 cut(s) | 546, 788, 935 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 752, 1655 |
| PleI | GAGTC | 1 cut(s) | 1535 |
| PpsI | GAGTC | 1 cut(s) | 1535 |
| PpuMI | RGGWCCY | 1 cut(s) | 582 |
| PscI | ACATGT | 2 cut(s) | 1479, 1594 |
| Psp124BI | GAGCTC | 1 cut(s) | 20 |
| Psp5II | RGGWCCY | 1 cut(s) | 582 |
| Psp6I | CCWGG | 1 cut(s) | 1507 |
| PspEI | GGTNACC | 1 cut(s) | 1471 |
| PspFI | CCCAGC | 3 cut(s) | 663, 667, 752 |
| PspGI | CCWGG | 1 cut(s) | 1507 |
| PspN4I | GGNNCC | 5 cut(s) | 705, 1053, 1220, 1335, 2037 |
| PspPI | GGNCC | 3 cut(s) | 441, 582, 1505 |
| PspPPI | RGGWCCY | 1 cut(s) | 582 |
| PstI | CTGCAG | 1 cut(s) | 1909 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1175 |
| PsuI | RGATCY | 3 cut(s) | 1051, 1437, 1624 |
| PvuII | CAGCTG | 1 cut(s) | 667 |
| RsaI | GTAC | 5 cut(s) | 9, 388, 769, 1252, 1647 |
| RsaNI | GTAC | 5 cut(s) | 8, 387, 768, 1251, 1646 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1061, 1119, 1209, 1482, 1697 |
| SacI | GAGCTC | 1 cut(s) | 20 |
| SapI | GCTCTTC | 1 cut(s) | 8 |
| SaqAI | TTAA | 7 cut(s) | 606, 642, 1130, 1359, 1572, 1713, 1743 |
| Sau96I | GGNCC | 3 cut(s) | 441, 582, 1505 |
| SchI | GAGTC | 1 cut(s) | 1535 |
| ScrFI | CCNGG | 3 cut(s) | 716, 1509, 2041 |
| SduI | GDGCHC | 6 cut(s) | 20, 339, 515, 622, 877, 1336 |
| SfcI | CTRYAG | 2 cut(s) | 571, 1905 |
| Sfr274I | CTCGAG | 1 cut(s) | 678 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1366 |
| SinI | GGWCC | 2 cut(s) | 582, 1505 |
| SlaI | CTCGAG | 1 cut(s) | 678 |
| SmiI | ATTTAAAT | 1 cut(s) | 1131 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1061, 1119, 1209, 1482, 1697 |
| SmlI | CTYRAG | 2 cut(s) | 678, 1898 |
| SmoI | CTYRAG | 2 cut(s) | 678, 1898 |
| SseBI | AGGCCT | 2 cut(s) | 32, 569 |
| SspI | AATATT | 1 cut(s) | 1300 |
| SspMI | CTAG | 1 cut(s) | 503 |
| SstI | GAGCTC | 1 cut(s) | 20 |
| StuI | AGGCCT | 2 cut(s) | 32, 569 |
| StyD4I | CCNGG | 3 cut(s) | 714, 1507, 2039 |
| SwaI | ATTTAAAT | 1 cut(s) | 1131 |
| TaaI | ACNGT | 8 cut(s) | 169, 1147, 1192, 1342, 1696, 1858, 1873, 2047 |
| TaiI | ACGT | 3 cut(s) | 90, 528, 1317 |
| TauI | GCSGC | 6 cut(s) | 238, 296, 378, 1419, 1435, 2013 |
| TfiI | GAWTC | 3 cut(s) | 546, 788, 935 |
| Tru1I | TTAA | 7 cut(s) | 606, 642, 1130, 1359, 1572, 1713, 1743 |
| Tru9I | TTAA | 7 cut(s) | 606, 642, 1130, 1359, 1572, 1713, 1743 |
| TscAI | CASTG | 3 cut(s) | 1066, 1176, 1699 |
| TseFI | GTSAC | 3 cut(s) | 1273, 1315, 1630 |
| TseI | GCWGC | 5 cut(s) | 560, 636, 740, 1238, 1904 |
| Tsp45I | GTSAC | 3 cut(s) | 1273, 1315, 1630 |
| TspDTI | ATGAA | 5 cut(s) | 489, 722, 1005, 1125, 2086 |
| TspGWI | ACGGA | 1 cut(s) | 25 |
| TspRI | CASTG | 3 cut(s) | 1066, 1176, 1699 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 752, 1655 |
| VpaK11BI | GGWCC | 2 cut(s) | 582, 1505 |
| XapI | RAATTY | 3 cut(s) | 452, 672, 1132 |
| XceI | RCATGY | 2 cut(s) | 1483, 1598 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1044 |
| XhoI | CTCGAG | 1 cut(s) | 678 |
| XspI | CTAG | 1 cut(s) | 503 |
| Zsp2I | ATGCAT | 1 cut(s) | 726 |