component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46280 AT2G46280 AT2G46290 |
| fragaria_vesca | FvH4_4g35950 |
| malus_domestica | MD00G1099900.v1.1 MD13G1013500.v1.1 MD15G1352700.v1.1 MD16G1010400.v1.1 |
| prunus_persica | Prupe.1G340200_v2.0.a1 Prupe.3G206800_v2.0.a1 |
| pyrus_communis | pycom02g16760 pycom13g01140 pycom16g01020 |
| rosa_chinensis | RchiOBHm_Chr4g0445591 RchiOBHm_Chr5g0012021 |
| rosa_laevigata | RLG00000005728 RLG00000031879 |
| rosa_multiflora | Rmu_sc0010148.1_g000009 Rmu_sc0023810.1_g000001 Rmu_ssc0000253.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00064570 Rroxscaffold_5G00386060 |
| rosa_rugosa | Rorug04G0362700 Rorug04G0460400 |
| rosa_samantha | Rh4AG424100 Rh4BG436200 Rh4CG450800 Rh4DG432700 Rh5AG092500 Rh5BG088300 Rh5CG102100 Rh5DG088800 |
| rosa_wichuraiana | Rw4G036360 Rw5G008070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 223 |
| AciI | CCGC | 2 cut(s) | 33, 198 |
| AcsI | RAATTY | 2 cut(s) | 83, 95 |
| AfaI | GTAC | 2 cut(s) | 27, 219 |
| AgsI | TTSAA | 3 cut(s) | 89, 116, 250 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| ApoI | RAATTY | 2 cut(s) | 83, 95 |
| AspS9I | GGNCC | 1 cut(s) | 149 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 215 |
| AvaII | GGWCC | 1 cut(s) | 149 |
| BccI | CCATC | 2 cut(s) | 173, 203 |
| BclI | TGATCA | 2 cut(s) | 16, 67 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| Bme18I | GGWCC | 1 cut(s) | 149 |
| BmgT120I | GGNCC | 1 cut(s) | 149 |
| BmsI | GCATC | 2 cut(s) | 34, 56 |
| BpuEI | CTTGAG | 1 cut(s) | 178 |
| BsaAI | YACGTR | 1 cut(s) | 217 |
| BseGI | GGATG | 1 cut(s) | 214 |
| BsiWI | CGTACG | 1 cut(s) | 217 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| Bsp143I | GATC | 2 cut(s) | 16, 67 |
| BspACI | CCGC | 2 cut(s) | 33, 198 |
| BssMI | GATC | 2 cut(s) | 16, 67 |
| Bst6I | CTCTTC | 1 cut(s) | 114 |
| BstBAI | YACGTR | 1 cut(s) | 217 |
| BstEII | GGTNACC | 1 cut(s) | 55 |
| BstF5I | GGATG | 1 cut(s) | 214 |
| BstKTI | GATC | 2 cut(s) | 19, 70 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 2 cut(s) | 16, 67 |
| BstPI | GGTNACC | 1 cut(s) | 55 |
| BstSNI | TACGTA | 1 cut(s) | 217 |
| BtsCI | GGATG | 1 cut(s) | 214 |
| Cfr13I | GGNCC | 1 cut(s) | 149 |
| Csp6I | GTAC | 2 cut(s) | 26, 218 |
| CviAII | CATG | 1 cut(s) | 20 |
| CviJI | RGCY | 1 cut(s) | 92 |
| CviKI_1 | RGCY | 1 cut(s) | 92 |
| CviQI | GTAC | 2 cut(s) | 26, 218 |
| DpnI | GATC | 2 cut(s) | 18, 69 |
| DpnII | GATC | 2 cut(s) | 16, 67 |
| Eam1104I | CTCTTC | 1 cut(s) | 114 |
| EarI | CTCTTC | 1 cut(s) | 114 |
| Eco105I | TACGTA | 1 cut(s) | 217 |
| Eco47I | GGWCC | 1 cut(s) | 149 |
| Eco91I | GGTNACC | 1 cut(s) | 55 |
| EcoO65I | GGTNACC | 1 cut(s) | 55 |
| EcoT22I | ATGCAT | 1 cut(s) | 49 |
| FaeI | CATG | 1 cut(s) | 23 |
| FaiI | YATR | 3 cut(s) | 21, 102, 155 |
| FatI | CATG | 1 cut(s) | 19 |
| FbaI | TGATCA | 2 cut(s) | 16, 67 |
| FblI | GTMKAC | 1 cut(s) | 223 |
| FokI | GGATG | 1 cut(s) | 221 |
| Hin1II | CATG | 1 cut(s) | 23 |
| HinfI | GANTC | 2 cut(s) | 109, 236 |
| HphI | GGTGA | 2 cut(s) | 49, 215 |
| Hpy166II | GTNNAC | 1 cut(s) | 224 |
| Hpy188I | TCNGA | 1 cut(s) | 241 |
| Hpy188III | TCNNGA | 4 cut(s) | 41, 116, 176, 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 224 |
| HpyCH4IV | ACGT | 2 cut(s) | 216, 220 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpySE526I | ACGT | 2 cut(s) | 216, 220 |
| Hsp92II | CATG | 1 cut(s) | 23 |
| Ksp22I | TGATCA | 2 cut(s) | 16, 67 |
| Kzo9I | GATC | 2 cut(s) | 16, 67 |
| LpnPI | CCDG | 1 cut(s) | 63 |
| LweI | GCATC | 2 cut(s) | 34, 56 |
| MaeII | ACGT | 2 cut(s) | 216, 220 |
| MaeIII | GTNAC | 2 cut(s) | 55, 212 |
| MalI | GATC | 2 cut(s) | 18, 69 |
| MboI | GATC | 2 cut(s) | 16, 67 |
| MboII | GAAGA | 2 cut(s) | 104, 131 |
| MluCI | AATT | 2 cut(s) | 83, 95 |
| MnlI | CCTC | 4 cut(s) | 18, 122, 194, 199 |
| Mph1103I | ATGCAT | 1 cut(s) | 49 |
| MseI | TTAA | 2 cut(s) | 135, 171 |
| NdeII | GATC | 2 cut(s) | 16, 67 |
| NlaIII | CATG | 1 cut(s) | 23 |
| NmeAIII | GCCGAG | 1 cut(s) | 9 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| NsiI | ATGCAT | 1 cut(s) | 49 |
| PfeI | GAWTC | 2 cut(s) | 109, 236 |
| Pfl23II | CGTACG | 1 cut(s) | 217 |
| Ppu21I | YACGTR | 1 cut(s) | 217 |
| PspEI | GGTNACC | 1 cut(s) | 55 |
| PspLI | CGTACG | 1 cut(s) | 217 |
| PspPI | GGNCC | 1 cut(s) | 149 |
| RsaI | GTAC | 2 cut(s) | 27, 219 |
| RsaNI | GTAC | 2 cut(s) | 26, 218 |
| SaqAI | TTAA | 2 cut(s) | 135, 171 |
| Sau3AI | GATC | 2 cut(s) | 16, 67 |
| Sau96I | GGNCC | 1 cut(s) | 149 |
| SetI | ASST | 5 cut(s) | 133, 154, 205, 219, 223 |
| SfaNI | GCATC | 2 cut(s) | 34, 56 |
| SgeI | CNNG | 8 cut(s) | 32, 41, 53, 90, 118, 128, 188, 207 |
| SinI | GGWCC | 1 cut(s) | 149 |
| SmlI | CTYRAG | 1 cut(s) | 193 |
| SmoI | CTYRAG | 1 cut(s) | 193 |
| SnaBI | TACGTA | 1 cut(s) | 217 |
| Sse9I | AATT | 2 cut(s) | 83, 95 |
| SsiI | CCGC | 2 cut(s) | 33, 198 |
| TaiI | ACGT | 2 cut(s) | 219, 223 |
| TasI | AATT | 2 cut(s) | 83, 95 |
| TfiI | GAWTC | 2 cut(s) | 109, 236 |
| Tru1I | TTAA | 2 cut(s) | 135, 171 |
| Tru9I | TTAA | 2 cut(s) | 135, 171 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| VpaK11BI | GGWCC | 1 cut(s) | 149 |
| XapI | RAATTY | 2 cut(s) | 83, 95 |
| XmiI | GTMKAC | 1 cut(s) | 223 |
| Zsp2I | ATGCAT | 1 cut(s) | 49 |