Prupe.3G206800_v2.0.a1

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
21365190 .. 21367311
2122 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G206800.1

Sequence Viewer

Length: 888 bp
ATGAGGCCGATTCTGATGAAAGGGCACGAGAGGCCCTTGACGTTTTTGACATACGACAGGGAGGGGGACCTCCTTTTATCCTGCGGCAAGGACCACACACCCGACAATGTCGAGCGCCTCGGCACCTATCGCGGCCACAACGGTGCCGTTTGGTGTGGTGATTTCACAAGAGACTCCGCGCGCCTCATCACCGGTAGCGCGGATCAGACCGCCAAGCTGTGGAACGTTCAGACCGGTCAGCAGCTATTCACCTTTAATTTTGACTCTCCGGCGAGGTCGGTTGACCTGTCAGTCGGCGATAGACTCGCAGTCATAACCACCGACCCTTTCATGGAGCTCTCTTCTGCGATTCACGTCAAGCGCATCGCCAAAGACCCCGCGATCGTTGGCGAATCGGCTCTGATACTCAAAGGACCTCAGGGAAGAAGACAAAGGGCTGTTTGGGGGCCTTTGAACAGAACCATCATAAGCGCCGGAGAAGACGCTGTTATTCGTATTTGGGACTCGGAGACTGGCAAACTACTAAAGGAGAACGATAAGGAAGTGGGTCACAAAAAGACGATTACATCACTTGCAAAATCTGTTGATGGTTCGCATTTCCTCACTGGCTCGCTAGATAAATCGGCCAGGCTTTGGGATATTAGAACGTTGACGCTTATCAAGACCTACGTGACTGAGCGTCCAGTCAATGCCGTTGCAATGTCTCCTCTTCTTGATGATGTGGTACTTGGTGGTGGTCAGGATGCATCAGCTGTCACCACAACTGATCATCGTGCTGGGAAATTCGAAGCCAAATTCTATGACAGGTTTCTCAAGTGGAGTGGAGGTGAGGATGGTTACGTACGTCTACATCACTTTGACTCAGATTACTTCAACATCAAGATTTAG

Protein Analysis

296

Amino Acids

32.77

Weight (kDa)

7.81

Isoelectric Point (pI)

31.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 290
AccB1I GGYRCC 2 cut(s) 122, 143
AccB7I CCANNNNNTGG 2 cut(s) 219, 633
AccI GTMKAC 1 cut(s) 847
AccII CGCG 5 cut(s) 132, 179, 181, 200, 380
AciI CCGC 6 cut(s) 84, 132, 177, 200, 210, 378
AclI AACGTT 2 cut(s) 225, 647
AclWI GGATC 1 cut(s) 210
AcoI YGGCCR 2 cut(s) 133, 624
AcsI RAATTY 2 cut(s) 782, 794
AfaI GTAC 2 cut(s) 726, 843
AfiI CCNNNNNNNGG 3 cut(s) 219, 331, 633
AgeI ACCGGT 2 cut(s) 191, 233
AgsI TTSAA 2 cut(s) 454, 874
AhdI GACNNNNNGTC 2 cut(s) 308, 678
AjiI CACGTC 1 cut(s) 355
AjnI CCWGG 1 cut(s) 626
AleI CACNNNNGTG 1 cut(s) 141
AluBI AGCT 4 cut(s) 217, 244, 337, 752
AluI AGCT 4 cut(s) 217, 244, 337, 752
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 3 cut(s) 165, 503, 708
AlwI GGATC 1 cut(s) 210
AoxI GGCC 5 cut(s) 5, 32, 133, 446, 624
ApeKI GCWGC 1 cut(s) 241
ApoI RAATTY 2 cut(s) 782, 794
AsiGI ACCGGT 2 cut(s) 191, 233
AspLEI GCGC 6 cut(s) 117, 181, 183, 200, 363, 473
AspS9I GGNCC 5 cut(s) 33, 67, 91, 413, 446
AsuHPI GGTGA 5 cut(s) 170, 181, 241, 748, 839
AsuII TTCGAA 1 cut(s) 786
AvaII GGWCC 3 cut(s) 67, 91, 413
AxyI CCTNAGG 1 cut(s) 417
BaeGI GKGCMC 1 cut(s) 27
BanI GGYRCC 2 cut(s) 122, 143
BanII GRGCYC 1 cut(s) 339
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 433, 486
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 253
BccI CCATC 3 cut(s) 470, 581, 827
BceAI ACGGC 2 cut(s) 131, 677
BciT130I CCWGG 1 cut(s) 628
BclI TGATCA 1 cut(s) 766
BcoDI GTCTC 3 cut(s) 165, 503, 708
BfaI CTAG 1 cut(s) 614
BfoI RGCGCY 2 cut(s) 118, 474
BisI GCNGC 3 cut(s) 85, 133, 242
BlsI GCNGC 3 cut(s) 86, 134, 243
Bme1390I CCNGG 1 cut(s) 628
Bme18I GGWCC 3 cut(s) 67, 91, 413
BmeRI GACNNNNNGTC 2 cut(s) 308, 678
BmgBI CACGTC 1 cut(s) 355
BmgT120I GGNCC 5 cut(s) 33, 67, 91, 413, 446
BmiI GGNNCC 4 cut(s) 68, 124, 145, 447
BmrFI CCNGG 1 cut(s) 628
BmsI GCATC 3 cut(s) 372, 733, 755
BpiI GAAGAC 2 cut(s) 433, 486
Bpu14I TTCGAA 1 cut(s) 786
BpuEI CTTGAG 1 cut(s) 797
BsaAI YACGTR 2 cut(s) 670, 841
BsaJI CCNNGG 1 cut(s) 118
BsaWI WCCGGW 2 cut(s) 191, 233
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 3 cut(s) 219, 331, 633
Bse118I RCCGGY 2 cut(s) 191, 233
Bse1I ACTGG 3 cut(s) 517, 610, 683
Bse21I CCTNAGG 1 cut(s) 417
Bse3DI GCAATG 1 cut(s) 705
BseBI CCWGG 1 cut(s) 628
BseDI CCNNGG 1 cut(s) 118
BseGI GGATG 2 cut(s) 748, 838
BseLI CCNNNNNNNGG 3 cut(s) 219, 331, 633
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 3 cut(s) 431, 666, 876
BseNI ACTGG 3 cut(s) 517, 610, 683
BsePI GCGCGC 1 cut(s) 179
BseRI GAGGAG 1 cut(s) 696
BseSI GKGCMC 1 cut(s) 27
BseXI GCAGC 1 cut(s) 253
BseYI CCCAGC 1 cut(s) 776
Bsh1236I CGCG 5 cut(s) 132, 179, 181, 200, 380
Bsh1285I CGRYCG 1 cut(s) 384
BshFI GGCC 5 cut(s) 7, 34, 135, 448, 626
BshNI GGYRCC 2 cut(s) 122, 143
BshTI ACCGGT 2 cut(s) 191, 233
BsiEI CGRYCG 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 339
BsiSI CCGG 4 cut(s) 192, 234, 269, 474
BsiWI CGTACG 1 cut(s) 841
BslFI GGGAC 2 cut(s) 80, 515
BslI CCNNNNNNNGG 3 cut(s) 219, 331, 633
BsmAI GTCTC 3 cut(s) 165, 503, 708
BsmFI GGGAC 2 cut(s) 80, 515
BsnI GGCC 5 cut(s) 7, 34, 135, 448, 626
Bsp119I TTCGAA 1 cut(s) 786
Bsp1286I GDGCHC 2 cut(s) 27, 339
Bsp143I GATC 3 cut(s) 202, 381, 766
BspACI CCGC 6 cut(s) 84, 132, 177, 200, 210, 378
BspANI GGCC 5 cut(s) 7, 34, 135, 448, 626
BspCNI CTCAG 3 cut(s) 430, 667, 875
BspFNI CGCG 5 cut(s) 132, 179, 181, 200, 380
BspLI GGNNCC 4 cut(s) 68, 124, 145, 447
BspPI GGATC 1 cut(s) 210
BspT104I TTCGAA 1 cut(s) 786
BspT107I GGYRCC 2 cut(s) 122, 143
BsrDI GCAATG 1 cut(s) 705
BsrFI RCCGGY 2 cut(s) 191, 233
BsrI ACTGG 3 cut(s) 517, 610, 683
BssAI RCCGGY 2 cut(s) 191, 233
BssECI CCNNGG 1 cut(s) 118
BssHII GCGCGC 1 cut(s) 179
BssMI GATC 3 cut(s) 202, 381, 766
BssSI CACGAG 1 cut(s) 26
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 1 cut(s) 628
Bst4CI ACNGT 1 cut(s) 143
Bst6I CTCTTC 2 cut(s) 346, 714
BstBAI YACGTR 2 cut(s) 670, 841
BstBI TTCGAA 1 cut(s) 786
BstC8I GCNNGC 2 cut(s) 181, 611
BstDEI CTNAG 3 cut(s) 417, 675, 862
BstF5I GGATG 2 cut(s) 748, 838
BstFNI CGCG 5 cut(s) 132, 179, 181, 200, 380
BstH2I RGCGCY 2 cut(s) 118, 474
BstHHI GCGC 6 cut(s) 117, 181, 183, 200, 363, 473
BstKTI GATC 3 cut(s) 205, 384, 769
BstMAI GTCTC 3 cut(s) 165, 503, 708
BstMBI GATC 3 cut(s) 202, 381, 766
BstMCI CGRYCG 1 cut(s) 384
BstMWI GCNNNNNNNGC 2 cut(s) 31, 129
BstNI CCWGG 1 cut(s) 628
BstSCI CCNGG 1 cut(s) 626
BstSLI GKGCMC 1 cut(s) 27
BstSNI TACGTA 1 cut(s) 841
BstUI CGCG 5 cut(s) 132, 179, 181, 200, 380
BstV1I GCAGC 1 cut(s) 253
BstV2I GAAGAC 2 cut(s) 433, 486
Bsu36I CCTNAGG 1 cut(s) 417
BsuRI GGCC 5 cut(s) 7, 34, 135, 448, 626
BtgZI GCGATG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 355
BtsCI GGATG 2 cut(s) 748, 838
BtsIMutI CAGTG 1 cut(s) 603
Cac8I GCNNGC 2 cut(s) 181, 611
CfoI GCGC 6 cut(s) 117, 181, 183, 200, 363, 473
Cfr10I RCCGGY 2 cut(s) 191, 233
Cfr13I GGNCC 5 cut(s) 33, 67, 91, 413, 446
CseI GACGC 3 cut(s) 491, 661, 668
Csp6I GTAC 2 cut(s) 725, 842
CspAI ACCGGT 2 cut(s) 191, 233
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 1 cut(s) 331
CviQI GTAC 2 cut(s) 725, 842
DdeI CTNAG 3 cut(s) 417, 675, 862
DpnI GATC 3 cut(s) 204, 383, 768
DpnII GATC 3 cut(s) 202, 381, 766
DrdI GACNNNNNNGTC 1 cut(s) 290
DriI GACNNNNNGTC 2 cut(s) 308, 678
DseDI GACNNNNNNGTC 1 cut(s) 290
EaeI YGGCCR 2 cut(s) 133, 624
Eam1104I CTCTTC 2 cut(s) 346, 714
Eam1105I GACNNNNNGTC 2 cut(s) 308, 678
EarI CTCTTC 2 cut(s) 346, 714
Ecl136II GAGCTC 1 cut(s) 337
Eco105I TACGTA 1 cut(s) 841
Eco24I GRGCYC 1 cut(s) 339
Eco47I GGWCC 3 cut(s) 67, 91, 413
Eco53kI GAGCTC 1 cut(s) 337
Eco81I CCTNAGG 1 cut(s) 417
EcoICRI GAGCTC 1 cut(s) 337
EcoO109I RGGNCCY 4 cut(s) 33, 67, 413, 446
EcoRII CCWGG 1 cut(s) 626
EcoT22I ATGCAT 1 cut(s) 748
EcoT38I GRGCYC 1 cut(s) 339
FaeI CATG 1 cut(s) 334
FaiI YATR 5 cut(s) 52, 314, 332, 467, 801
FaqI GGGAC 2 cut(s) 80, 515
FatI CATG 1 cut(s) 330
FauI CCCGC 1 cut(s) 385
FbaI TGATCA 1 cut(s) 766
FblI GTMKAC 1 cut(s) 847
Fnu4HI GCNGC 3 cut(s) 85, 133, 242
FokI GGATG 2 cut(s) 755, 845
FriOI GRGCYC 1 cut(s) 339
Fsp4HI GCNGC 3 cut(s) 85, 133, 242
FspBI CTAG 1 cut(s) 614
GlaI GCGC 6 cut(s) 116, 180, 182, 199, 362, 472
GluI GCNGC 3 cut(s) 85, 133, 242
GsaI CCCAGC 1 cut(s) 780
HaeII RGCGCY 2 cut(s) 118, 474
HaeIII GGCC 5 cut(s) 7, 34, 135, 448, 626
HapII CCGG 4 cut(s) 192, 234, 269, 474
HgaI GACGC 3 cut(s) 491, 661, 668
HhaI GCGC 6 cut(s) 117, 181, 183, 200, 363, 473
Hin1II CATG 1 cut(s) 334
Hin6I GCGC 6 cut(s) 115, 179, 181, 198, 361, 471
HinP1I GCGC 6 cut(s) 115, 179, 181, 198, 361, 471
HincII GTYRAC 2 cut(s) 283, 651
HindII GTYRAC 2 cut(s) 283, 651
HinfI GANTC 8 cut(s) 10, 173, 263, 303, 349, 392, 503, 860
HpaII CCGG 4 cut(s) 192, 234, 269, 474
HphI GGTGA 5 cut(s) 170, 181, 241, 748, 839
Hpy166II GTNNAC 3 cut(s) 283, 651, 848
Hpy188I TCNGA 6 cut(s) 15, 207, 231, 402, 508, 865
Hpy188III TCNNGA 4 cut(s) 661, 713, 740, 880
Hpy8I GTNNAC 3 cut(s) 283, 651, 848
HpyCH4III ACNGT 1 cut(s) 143
HpyCH4IV ACGT 7 cut(s) 41, 225, 354, 647, 669, 840, 844
HpyCH4V TGCA 3 cut(s) 575, 698, 746
HpyF10VI GCNNNNNNNGC 2 cut(s) 31, 129
HpyF3I CTNAG 3 cut(s) 417, 675, 862
HpySE526I ACGT 7 cut(s) 41, 225, 354, 647, 669, 840, 844
Hsp92II CATG 1 cut(s) 334
HspAI GCGC 6 cut(s) 115, 179, 181, 198, 361, 471
Ksp22I TGATCA 1 cut(s) 766
Kzo9I GATC 3 cut(s) 202, 381, 766
LmnI GCTCC 1 cut(s) 334
Lsp1109I GCAGC 1 cut(s) 253
LweI GCATC 3 cut(s) 372, 733, 755
MaeI CTAG 1 cut(s) 614
MaeII ACGT 7 cut(s) 41, 225, 354, 647, 669, 840, 844
MaeIII GTNAC 4 cut(s) 548, 670, 754, 836
MalI GATC 3 cut(s) 204, 383, 768
MboI GATC 3 cut(s) 202, 381, 766
MboII GAAGA 5 cut(s) 333, 435, 438, 491, 701
MhlI GDGCHC 2 cut(s) 27, 339
MluCI AATT 3 cut(s) 256, 782, 794
MlyI GAGTC 5 cut(s) 167, 257, 297, 497, 854
Mph1103I ATGCAT 1 cut(s) 748
MseI TTAA 1 cut(s) 255
MslI CAYNNNNRTG 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 752
MspI CCGG 4 cut(s) 192, 234, 269, 474
MspR9I CCNGG 1 cut(s) 628
MvaI CCWGG 1 cut(s) 628
MvnI CGCG 5 cut(s) 132, 179, 181, 200, 380
MwoI GCNNNNNNNGC 2 cut(s) 31, 129
NdeII GATC 3 cut(s) 202, 381, 766
NlaIII CATG 1 cut(s) 334
NlaIV GGNNCC 4 cut(s) 68, 124, 145, 447
NmeAIII GCCGAG 1 cut(s) 99
NmuCI GTSAC 3 cut(s) 548, 670, 754
NsiI ATGCAT 1 cut(s) 748
NspV TTCGAA 1 cut(s) 786
OliI CACNNNNGTG 1 cut(s) 141
PauI GCGCGC 1 cut(s) 179
PfeI GAWTC 3 cut(s) 10, 349, 392
Pfl23II CGTACG 1 cut(s) 841
PflFI GACNNNGTC 1 cut(s) 107
PflMI CCANNNNNTGG 2 cut(s) 219, 633
PinAI ACCGGT 2 cut(s) 191, 233
PkrI GCNGC 3 cut(s) 86, 134, 243
Ple19I CGATCG 1 cut(s) 384
PleI GAGTC 5 cut(s) 167, 257, 297, 497, 854
PpsI GAGTC 5 cut(s) 167, 257, 297, 497, 854
Ppu21I YACGTR 2 cut(s) 670, 841
PpuMI RGGWCCY 2 cut(s) 67, 413
Psp124BI GAGCTC 1 cut(s) 339
Psp1406I AACGTT 2 cut(s) 225, 647
Psp5II RGGWCCY 2 cut(s) 67, 413
Psp6I CCWGG 1 cut(s) 626
PspFI CCCAGC 1 cut(s) 776
PspGI CCWGG 1 cut(s) 626
PspLI CGTACG 1 cut(s) 841
PspN4I GGNNCC 4 cut(s) 68, 124, 145, 447
PspPI GGNCC 5 cut(s) 33, 67, 91, 413, 446
PspPPI RGGWCCY 2 cut(s) 67, 413
PsyI GACNNNGTC 1 cut(s) 107
PteI GCGCGC 1 cut(s) 179
PvuI CGATCG 1 cut(s) 384
PvuII CAGCTG 1 cut(s) 752
RsaI GTAC 2 cut(s) 726, 843
RsaNI GTAC 2 cut(s) 725, 842
RseI CAYNNNNRTG 1 cut(s) 141
SacI GAGCTC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 255
SatI GCNGC 3 cut(s) 85, 133, 242
Sau3AI GATC 3 cut(s) 202, 381, 766
Sau96I GGNCC 5 cut(s) 33, 67, 91, 413, 446
SchI GAGTC 5 cut(s) 167, 257, 297, 497, 854
ScrFI CCNGG 1 cut(s) 628
SduI GDGCHC 2 cut(s) 27, 339
SfaNI GCATC 3 cut(s) 372, 733, 755
SfuI TTCGAA 1 cut(s) 786
SinI GGWCC 3 cut(s) 67, 91, 413
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
SnaBI TACGTA 1 cut(s) 841
Sse9I AATT 3 cut(s) 256, 782, 794
SsiI CCGC 6 cut(s) 84, 132, 177, 200, 210, 378
SspMI CTAG 1 cut(s) 614
SstI GAGCTC 1 cut(s) 339
StyD4I CCNGG 1 cut(s) 626
TaaI ACNGT 1 cut(s) 143
TaiI ACGT 7 cut(s) 44, 228, 357, 650, 672, 843, 847
TaqI TCGA 2 cut(s) 111, 786
TasI AATT 3 cut(s) 256, 782, 794
TauI GCSGC 2 cut(s) 87, 135
TfiI GAWTC 3 cut(s) 10, 349, 392
Tru1I TTAA 1 cut(s) 255
Tru9I TTAA 1 cut(s) 255
TscAI CASTG 1 cut(s) 610
TseFI GTSAC 3 cut(s) 548, 670, 754
TseI GCWGC 1 cut(s) 241
Tsp45I GTSAC 3 cut(s) 548, 670, 754
TspDTI ATGAA 2 cut(s) 32, 319
TspRI CASTG 1 cut(s) 610
Tth111I GACNNNGTC 1 cut(s) 107
Van91I CCANNNNNTGG 2 cut(s) 219, 633
VpaK11BI GGWCC 3 cut(s) 67, 91, 413
XapI RAATTY 2 cut(s) 782, 794
XmiI GTMKAC 1 cut(s) 847
XspI CTAG 1 cut(s) 614
Zsp2I ATGCAT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.