component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46280 AT2G46280 AT2G46290 |
| fragaria_vesca | FvH4_4g35950 |
| malus_domestica | MD00G1099900.v1.1 MD13G1013500.v1.1 MD15G1352700.v1.1 MD16G1010400.v1.1 |
| prunus_persica | Prupe.1G340200_v2.0.a1 Prupe.3G206800_v2.0.a1 |
| pyrus_communis | pycom02g16760 pycom13g01140 pycom16g01020 |
| rosa_chinensis | RchiOBHm_Chr4g0445591 RchiOBHm_Chr5g0012021 |
| rosa_laevigata | RLG00000005728 RLG00000031879 |
| rosa_multiflora | Rmu_sc0010148.1_g000009 Rmu_sc0023810.1_g000001 Rmu_ssc0000253.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00064570 Rroxscaffold_5G00386060 |
| rosa_rugosa | Rorug04G0362700 Rorug04G0460400 |
| rosa_samantha | Rh4AG424100 Rh4BG436200 Rh4CG450800 Rh4DG432700 Rh5AG092500 Rh5BG088300 Rh5CG102100 Rh5DG088800 |
| rosa_wichuraiana | Rw4G036360 Rw5G008070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 502 |
| AccIII | TCCGGA | 1 cut(s) | 163 |
| AcsI | RAATTY | 2 cut(s) | 362, 374 |
| AfaI | GTAC | 1 cut(s) | 306 |
| AgeI | ACCGGT | 1 cut(s) | 185 |
| AgsI | TTSAA | 5 cut(s) | 34, 107, 395, 451, 529 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 258 |
| AhlI | ACTAGT | 1 cut(s) | 151 |
| AluBI | AGCT | 2 cut(s) | 17, 211 |
| AluI | AGCT | 2 cut(s) | 17, 211 |
| Alw26I | GTCTC | 1 cut(s) | 83 |
| Aor13HI | TCCGGA | 1 cut(s) | 163 |
| AoxI | GGCC | 1 cut(s) | 26 |
| ApoI | RAATTY | 2 cut(s) | 362, 374 |
| AseI | ATTAAT | 1 cut(s) | 435 |
| AsiGI | ACCGGT | 1 cut(s) | 185 |
| AspLEI | GCGC | 1 cut(s) | 53 |
| AspS9I | GGNCC | 2 cut(s) | 26, 428 |
| AsuHPI | GGTGA | 2 cut(s) | 328, 494 |
| AsuII | TTCGAA | 1 cut(s) | 366 |
| AvaII | GGWCC | 1 cut(s) | 428 |
| BccI | CCATC | 3 cut(s) | 161, 452, 482 |
| BceAI | ACGGC | 1 cut(s) | 13 |
| BciVI | GTATCC | 1 cut(s) | 211 |
| BclI | TGATCA | 1 cut(s) | 346 |
| BcoDI | GTCTC | 1 cut(s) | 83 |
| BcuI | ACTAGT | 1 cut(s) | 151 |
| BfaI | CTAG | 2 cut(s) | 152, 222 |
| BfoI | RGCGCY | 1 cut(s) | 54 |
| BfuI | GTATCC | 1 cut(s) | 211 |
| Bme18I | GGWCC | 1 cut(s) | 428 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 258 |
| BmgT120I | GGNCC | 2 cut(s) | 26, 428 |
| BmiI | GGNNCC | 2 cut(s) | 27, 190 |
| BmsI | GCATC | 2 cut(s) | 52, 313 |
| Bpu14I | TTCGAA | 1 cut(s) | 366 |
| BpuEI | CTTGAG | 1 cut(s) | 457 |
| BsaWI | WCCGGW | 3 cut(s) | 163, 185, 249 |
| Bse118I | RCCGGY | 1 cut(s) | 185 |
| Bse1I | ACTGG | 2 cut(s) | 97, 263 |
| Bse3DI | GCAATG | 1 cut(s) | 285 |
| BseAI | TCCGGA | 1 cut(s) | 163 |
| BseGI | GGATG | 2 cut(s) | 172, 328 |
| BseMI | GCAATG | 1 cut(s) | 285 |
| BseMII | CTCAG | 2 cut(s) | 78, 246 |
| BseNI | ACTGG | 2 cut(s) | 97, 263 |
| BseYI | CCCAGC | 1 cut(s) | 356 |
| BshFI | GGCC | 1 cut(s) | 28 |
| BshTI | ACCGGT | 1 cut(s) | 185 |
| BsiSI | CCGG | 4 cut(s) | 54, 164, 186, 250 |
| BsmAI | GTCTC | 1 cut(s) | 83 |
| BsnI | GGCC | 1 cut(s) | 28 |
| Bsp119I | TTCGAA | 1 cut(s) | 366 |
| Bsp13I | TCCGGA | 1 cut(s) | 163 |
| Bsp143I | GATC | 2 cut(s) | 141, 346 |
| BspANI | GGCC | 1 cut(s) | 28 |
| BspCNI | CTCAG | 2 cut(s) | 79, 247 |
| BspEI | TCCGGA | 1 cut(s) | 163 |
| BspLI | GGNNCC | 2 cut(s) | 27, 190 |
| BspT104I | TTCGAA | 1 cut(s) | 366 |
| BsrDI | GCAATG | 1 cut(s) | 285 |
| BsrFI | RCCGGY | 1 cut(s) | 185 |
| BsrI | ACTGG | 2 cut(s) | 97, 263 |
| BssAI | RCCGGY | 1 cut(s) | 185 |
| BssMI | GATC | 2 cut(s) | 141, 346 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 294, 393 |
| BstBI | TTCGAA | 1 cut(s) | 366 |
| BstDEI | CTNAG | 2 cut(s) | 87, 255 |
| BstF5I | GGATG | 2 cut(s) | 172, 328 |
| BstH2I | RGCGCY | 1 cut(s) | 54 |
| BstHHI | GCGC | 1 cut(s) | 53 |
| BstKTI | GATC | 2 cut(s) | 144, 349 |
| BstMAI | GTCTC | 1 cut(s) | 83 |
| BstMBI | GATC | 2 cut(s) | 141, 346 |
| BsuI | GTATCC | 1 cut(s) | 211 |
| BsuRI | GGCC | 1 cut(s) | 28 |
| BtsCI | GGATG | 2 cut(s) | 172, 328 |
| CfoI | GCGC | 1 cut(s) | 53 |
| Cfr10I | RCCGGY | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 2 cut(s) | 26, 428 |
| Csp6I | GTAC | 1 cut(s) | 305 |
| CspAI | ACCGGT | 1 cut(s) | 185 |
| CviAII | CATG | 2 cut(s) | 299, 518 |
| CviJI | RGCY | 5 cut(s) | 17, 28, 211, 371, 446 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 28, 211, 371, 446 |
| CviQI | GTAC | 1 cut(s) | 305 |
| DdeI | CTNAG | 2 cut(s) | 87, 255 |
| DpnI | GATC | 2 cut(s) | 143, 348 |
| DpnII | GATC | 2 cut(s) | 141, 346 |
| DriI | GACNNNNNGTC | 1 cut(s) | 258 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 294, 393 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 258 |
| EarI | CTCTTC | 3 cut(s) | 117, 294, 393 |
| Eco47I | GGWCC | 1 cut(s) | 428 |
| FaeI | CATG | 2 cut(s) | 302, 521 |
| FaiI | YATR | 6 cut(s) | 47, 247, 300, 381, 497, 519 |
| FatI | CATG | 2 cut(s) | 298, 517 |
| FbaI | TGATCA | 1 cut(s) | 346 |
| FblI | GTMKAC | 1 cut(s) | 502 |
| FokI | GGATG | 2 cut(s) | 179, 335 |
| FspBI | CTAG | 2 cut(s) | 152, 222 |
| GlaI | GCGC | 1 cut(s) | 52 |
| GsaI | CCCAGC | 1 cut(s) | 360 |
| HaeII | RGCGCY | 1 cut(s) | 54 |
| HaeIII | GGCC | 1 cut(s) | 28 |
| HapII | CCGG | 4 cut(s) | 54, 164, 186, 250 |
| HhaI | GCGC | 1 cut(s) | 53 |
| Hin1II | CATG | 2 cut(s) | 302, 521 |
| Hin6I | GCGC | 1 cut(s) | 51 |
| HinP1I | GCGC | 1 cut(s) | 51 |
| HindIII | AAGCTT | 1 cut(s) | 209 |
| HinfI | GANTC | 4 cut(s) | 83, 232, 259, 388 |
| HpaII | CCGG | 4 cut(s) | 54, 164, 186, 250 |
| HphI | GGTGA | 2 cut(s) | 328, 494 |
| Hpy166II | GTNNAC | 2 cut(s) | 173, 503 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 6 cut(s) | 107, 164, 241, 320, 395, 535 |
| Hpy8I | GTNNAC | 2 cut(s) | 173, 503 |
| HpyAV | CCTTC | 1 cut(s) | 112 |
| HpyCH4IV | ACGT | 1 cut(s) | 499 |
| HpyCH4V | TGCA | 3 cut(s) | 272, 278, 326 |
| HpyF3I | CTNAG | 2 cut(s) | 87, 255 |
| HpySE526I | ACGT | 1 cut(s) | 499 |
| Hsp92II | CATG | 2 cut(s) | 302, 521 |
| HspAI | GCGC | 1 cut(s) | 51 |
| Kpn2I | TCCGGA | 1 cut(s) | 163 |
| Ksp22I | TGATCA | 1 cut(s) | 346 |
| Kzo9I | GATC | 2 cut(s) | 141, 346 |
| LweI | GCATC | 2 cut(s) | 52, 313 |
| MaeI | CTAG | 2 cut(s) | 152, 222 |
| MaeII | ACGT | 1 cut(s) | 499 |
| MaeIII | GTNAC | 3 cut(s) | 128, 334, 491 |
| MalI | GATC | 2 cut(s) | 143, 348 |
| MboI | GATC | 2 cut(s) | 141, 346 |
| MboII | GAAGA | 7 cut(s) | 16, 71, 134, 281, 383, 410, 497 |
| MluCI | AATT | 2 cut(s) | 362, 374 |
| MlyI | GAGTC | 2 cut(s) | 226, 268 |
| MnlI | CCTC | 4 cut(s) | 118, 297, 401, 473 |
| MroI | TCCGGA | 1 cut(s) | 163 |
| MseI | TTAA | 3 cut(s) | 156, 414, 435 |
| MspI | CCGG | 4 cut(s) | 54, 164, 186, 250 |
| NdeII | GATC | 2 cut(s) | 141, 346 |
| NlaIII | CATG | 2 cut(s) | 302, 521 |
| NlaIV | GGNNCC | 2 cut(s) | 27, 190 |
| NmuCI | GTSAC | 2 cut(s) | 128, 334 |
| NspV | TTCGAA | 1 cut(s) | 366 |
| PfeI | GAWTC | 2 cut(s) | 83, 388 |
| PinAI | ACCGGT | 1 cut(s) | 185 |
| PleI | GAGTC | 2 cut(s) | 226, 267 |
| PpsI | GAGTC | 2 cut(s) | 226, 267 |
| PshBI | ATTAAT | 1 cut(s) | 435 |
| PspFI | CCCAGC | 1 cut(s) | 356 |
| PspN4I | GGNNCC | 2 cut(s) | 27, 190 |
| PspPI | GGNCC | 2 cut(s) | 26, 428 |
| RsaI | GTAC | 1 cut(s) | 306 |
| RsaNI | GTAC | 1 cut(s) | 305 |
| SaqAI | TTAA | 3 cut(s) | 156, 414, 435 |
| Sau3AI | GATC | 2 cut(s) | 141, 346 |
| Sau96I | GGNCC | 2 cut(s) | 26, 428 |
| SchI | GAGTC | 2 cut(s) | 226, 268 |
| SetI | ASST | 6 cut(s) | 19, 213, 412, 433, 484, 502 |
| SfaNI | GCATC | 2 cut(s) | 52, 313 |
| SfuI | TTCGAA | 1 cut(s) | 366 |
| SinI | GGWCC | 1 cut(s) | 428 |
| SmlI | CTYRAG | 1 cut(s) | 472 |
| SmoI | CTYRAG | 1 cut(s) | 472 |
| SpeI | ACTAGT | 1 cut(s) | 151 |
| Sse9I | AATT | 2 cut(s) | 362, 374 |
| SspMI | CTAG | 2 cut(s) | 152, 222 |
| TaiI | ACGT | 1 cut(s) | 502 |
| TaqI | TCGA | 2 cut(s) | 366, 513 |
| TasI | AATT | 2 cut(s) | 362, 374 |
| TatI | WGTACW | 1 cut(s) | 304 |
| TfiI | GAWTC | 2 cut(s) | 83, 388 |
| Tru1I | TTAA | 3 cut(s) | 156, 414, 435 |
| Tru9I | TTAA | 3 cut(s) | 156, 414, 435 |
| TseFI | GTSAC | 2 cut(s) | 128, 334 |
| Tsp45I | GTSAC | 2 cut(s) | 128, 334 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 428 |
| VspI | ATTAAT | 1 cut(s) | 435 |
| XapI | RAATTY | 2 cut(s) | 362, 374 |
| XmiI | GTMKAC | 1 cut(s) | 502 |
| XspI | CTAG | 2 cut(s) | 152, 222 |