component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46280 AT2G46280 AT2G46290 |
| fragaria_vesca | FvH4_4g35950 |
| malus_domestica | MD00G1099900.v1.1 MD13G1013500.v1.1 MD15G1352700.v1.1 MD16G1010400.v1.1 |
| prunus_persica | Prupe.1G340200_v2.0.a1 Prupe.3G206800_v2.0.a1 |
| pyrus_communis | pycom02g16760 pycom13g01140 pycom16g01020 |
| rosa_chinensis | RchiOBHm_Chr4g0445591 RchiOBHm_Chr5g0012021 |
| rosa_laevigata | RLG00000005728 RLG00000031879 |
| rosa_multiflora | Rmu_sc0010148.1_g000009 Rmu_sc0023810.1_g000001 Rmu_ssc0000253.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00064570 Rroxscaffold_5G00386060 |
| rosa_rugosa | Rorug04G0362700 Rorug04G0460400 |
| rosa_samantha | Rh4AG424100 Rh4BG436200 Rh4CG450800 Rh4DG432700 Rh5AG092500 Rh5BG088300 Rh5CG102100 Rh5DG088800 |
| rosa_wichuraiana | Rw4G036360 Rw5G008070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 11 |
| AccI | GTMKAC | 1 cut(s) | 114 |
| AccII | CGCG | 1 cut(s) | 176 |
| AciI | CCGC | 5 cut(s) | 6, 9, 174, 227, 289 |
| AcoI | YGGCCR | 2 cut(s) | 3, 290 |
| AcsI | RAATTY | 1 cut(s) | 218 |
| AcyI | GRCGYC | 1 cut(s) | 156 |
| AfaI | GTAC | 1 cut(s) | 47 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 26 |
| AjnI | CCWGG | 1 cut(s) | 197 |
| AluBI | AGCT | 2 cut(s) | 183, 189 |
| AluI | AGCT | 2 cut(s) | 183, 189 |
| Ama87I | CYCGRG | 1 cut(s) | 230 |
| AoxI | GGCC | 3 cut(s) | 3, 213, 290 |
| ApoI | RAATTY | 1 cut(s) | 218 |
| AsuHPI | GGTGA | 1 cut(s) | 9 |
| AvaI | CYCGRG | 1 cut(s) | 230 |
| BbsI | GAAGAC | 1 cut(s) | 254 |
| BccI | CCATC | 3 cut(s) | 71, 131, 196 |
| BceAI | ACGGC | 1 cut(s) | 115 |
| BciT130I | CCWGG | 1 cut(s) | 199 |
| BisI | GCNGC | 4 cut(s) | 6, 9, 227, 290 |
| BlsI | GCNGC | 4 cut(s) | 7, 10, 228, 291 |
| Bme1390I | CCNGG | 1 cut(s) | 199 |
| BmeT110I | CYCGRG | 1 cut(s) | 230 |
| BmrFI | CCNGG | 1 cut(s) | 199 |
| BmsI | GCATC | 1 cut(s) | 66 |
| BpiI | GAAGAC | 1 cut(s) | 254 |
| BpmI | CTGGAG | 1 cut(s) | 52 |
| BpuEI | CTTGAG | 1 cut(s) | 169 |
| BsaHI | GRCGYC | 1 cut(s) | 156 |
| BsaJI | CCNNGG | 1 cut(s) | 103 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 26 |
| BseBI | CCWGG | 1 cut(s) | 199 |
| BseDI | CCNNGG | 1 cut(s) | 103 |
| BseGI | GGATG | 1 cut(s) | 207 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 26 |
| BseRI | GAGGAG | 3 cut(s) | 92, 261, 264 |
| Bsh1236I | CGCG | 1 cut(s) | 176 |
| Bsh1285I | CGRYCG | 1 cut(s) | 174 |
| BshFI | GGCC | 3 cut(s) | 5, 215, 292 |
| BsiEI | CGRYCG | 1 cut(s) | 174 |
| BsiHKCI | CYCGRG | 1 cut(s) | 230 |
| BsiSI | CCGG | 2 cut(s) | 27, 159 |
| BsiWI | CGTACG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 26 |
| BsnI | GGCC | 3 cut(s) | 5, 215, 292 |
| BsoBI | CYCGRG | 1 cut(s) | 230 |
| Bsp143I | GATC | 1 cut(s) | 177 |
| BspACI | CCGC | 5 cut(s) | 6, 9, 174, 227, 289 |
| BspANI | GGCC | 3 cut(s) | 5, 215, 292 |
| BspFNI | CGCG | 1 cut(s) | 176 |
| BsrBI | CCGCTC | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 103 |
| BssMI | GATC | 1 cut(s) | 177 |
| BssNI | GRCGYC | 1 cut(s) | 156 |
| Bst2UI | CCWGG | 1 cut(s) | 199 |
| Bst6I | CTCTTC | 1 cut(s) | 282 |
| BstACI | GRCGYC | 1 cut(s) | 156 |
| BstF5I | GGATG | 1 cut(s) | 207 |
| BstFNI | CGCG | 1 cut(s) | 176 |
| BstKTI | GATC | 1 cut(s) | 180 |
| BstMBI | GATC | 1 cut(s) | 177 |
| BstMCI | CGRYCG | 1 cut(s) | 174 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BstNI | CCWGG | 1 cut(s) | 199 |
| BstSCI | CCNGG | 1 cut(s) | 197 |
| BstUI | CGCG | 1 cut(s) | 176 |
| BstV2I | GAAGAC | 1 cut(s) | 254 |
| BsuRI | GGCC | 3 cut(s) | 5, 215, 292 |
| BtsCI | GGATG | 1 cut(s) | 207 |
| CseI | GACGC | 1 cut(s) | 164 |
| Csp6I | GTAC | 1 cut(s) | 46 |
| CviJI | RGCY | 9 cut(s) | 5, 30, 72, 108, 183, 189, 215, 226, 292 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 30, 72, 108, 183, 189, 215, 226, 292 |
| CviQI | GTAC | 1 cut(s) | 46 |
| DpnI | GATC | 1 cut(s) | 179 |
| DpnII | GATC | 1 cut(s) | 177 |
| EaeI | YGGCCR | 2 cut(s) | 3, 290 |
| Eam1104I | CTCTTC | 1 cut(s) | 282 |
| EarI | CTCTTC | 1 cut(s) | 282 |
| Eco88I | CYCGRG | 1 cut(s) | 230 |
| EcoRII | CCWGG | 1 cut(s) | 197 |
| FaiI | YATR | 2 cut(s) | 83, 111 |
| FblI | GTMKAC | 1 cut(s) | 114 |
| Fnu4HI | GCNGC | 4 cut(s) | 6, 9, 227, 290 |
| FokI | GGATG | 1 cut(s) | 214 |
| Fsp4HI | GCNGC | 4 cut(s) | 6, 9, 227, 290 |
| GluI | GCNGC | 4 cut(s) | 6, 9, 227, 290 |
| GsuI | CTGGAG | 1 cut(s) | 52 |
| HaeIII | GGCC | 3 cut(s) | 5, 215, 292 |
| HapII | CCGG | 2 cut(s) | 27, 159 |
| HgaI | GACGC | 1 cut(s) | 164 |
| Hin1I | GRCGYC | 1 cut(s) | 156 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HinfI | GANTC | 1 cut(s) | 297 |
| HpaII | CCGG | 2 cut(s) | 27, 159 |
| HphI | GGTGA | 1 cut(s) | 9 |
| Hpy166II | GTNNAC | 2 cut(s) | 94, 115 |
| Hpy188I | TCNGA | 3 cut(s) | 136, 241, 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 148 |
| Hpy8I | GTNNAC | 2 cut(s) | 94, 115 |
| Hpy99I | CGWCG | 4 cut(s) | 46, 136, 158, 172 |
| HpyCH4IV | ACGT | 2 cut(s) | 44, 48 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| HpySE526I | ACGT | 2 cut(s) | 44, 48 |
| Hsp92I | GRCGYC | 1 cut(s) | 156 |
| Kzo9I | GATC | 1 cut(s) | 177 |
| LmnI | GCTCC | 1 cut(s) | 125 |
| LpnPI | CCDG | 6 cut(s) | 40, 82, 86, 172, 184, 211 |
| LweI | GCATC | 1 cut(s) | 66 |
| MaeII | ACGT | 2 cut(s) | 44, 48 |
| MalI | GATC | 1 cut(s) | 179 |
| MbiI | CCGCTC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 177 |
| MboII | GAAGA | 4 cut(s) | 254, 257, 269, 272 |
| MluCI | AATT | 1 cut(s) | 218 |
| MlyI | GAGTC | 1 cut(s) | 291 |
| MmeI | TCCRAC | 1 cut(s) | 114 |
| MnlI | CCTC | 8 cut(s) | 34, 70, 113, 155, 205, 279, 282, 285 |
| MseI | TTAA | 2 cut(s) | 222, 304 |
| MspI | CCGG | 2 cut(s) | 27, 159 |
| MspR9I | CCNGG | 1 cut(s) | 199 |
| MvaI | CCWGG | 1 cut(s) | 199 |
| MvnI | CGCG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NdeII | GATC | 1 cut(s) | 177 |
| NmeAIII | GCCGAG | 1 cut(s) | 84 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 111 |
| Pfl23II | CGTACG | 1 cut(s) | 45 |
| PkrI | GCNGC | 4 cut(s) | 7, 10, 228, 291 |
| PleI | GAGTC | 1 cut(s) | 291 |
| PpsI | GAGTC | 1 cut(s) | 291 |
| Psp6I | CCWGG | 1 cut(s) | 197 |
| PspGI | CCWGG | 1 cut(s) | 197 |
| PspLI | CGTACG | 1 cut(s) | 45 |
| RsaI | GTAC | 1 cut(s) | 47 |
| RsaNI | GTAC | 1 cut(s) | 46 |
| SalI | GTCGAC | 1 cut(s) | 113 |
| SaqAI | TTAA | 2 cut(s) | 222, 304 |
| SatI | GCNGC | 4 cut(s) | 6, 9, 227, 290 |
| Sau3AI | GATC | 1 cut(s) | 177 |
| SchI | GAGTC | 1 cut(s) | 291 |
| ScrFI | CCNGG | 1 cut(s) | 199 |
| SetI | ASST | 6 cut(s) | 26, 47, 51, 185, 191, 200 |
| SfaNI | GCATC | 1 cut(s) | 66 |
| SmlI | CTYRAG | 1 cut(s) | 184 |
| SmoI | CTYRAG | 1 cut(s) | 184 |
| Sse9I | AATT | 1 cut(s) | 218 |
| SsiI | CCGC | 5 cut(s) | 6, 9, 174, 227, 289 |
| StyD4I | CCNGG | 1 cut(s) | 197 |
| TaiI | ACGT | 2 cut(s) | 47, 51 |
| TaqI | TCGA | 2 cut(s) | 114, 300 |
| TasI | AATT | 1 cut(s) | 218 |
| TauI | GCSGC | 4 cut(s) | 8, 11, 229, 292 |
| Tru1I | TTAA | 2 cut(s) | 222, 304 |
| Tru9I | TTAA | 2 cut(s) | 222, 304 |
| XapI | RAATTY | 1 cut(s) | 218 |
| XmiI | GTMKAC | 1 cut(s) | 114 |