Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0003652

Physical Location & Seq

Genomic Coordinates Forward (+)

8477034 .. 8483081

Gene Structure 6048 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1118900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2094 bp

ATGGCGGTTTACAAAGTGAAACTGTTGGGACCAAATGGTGAGGAGAATGAGTTTGAAGCTCCAGATGGCGTTCACATCCCTGAGTCAGCTGAAAGCGCAGGTCTGAAGTTGCCCTACTTATACCGGTCCGGTGCCTGCTCTACTGGTACCGGGTTGTTGGTTTGGGGATTGGTGGATCAATCGGAGGCGGTCGTCGCACAGAGGGTGAAGGAAGCGGAGATCACCGAGCAGGACTCGCTTCTTCTGACGAGGAACCTGCTTCGTATTGCTATATTCAATATCAGTTACATCAGAGGCCTCTTTCCAGAGAAGTACTTCAACGATAAGTCTGTTCCTGCTTTAGAGATGAAGATAAAAAAGCTAATGCCAATGGATGCTGAGTCTCGCAGGCTTCTTGATTGGATGGAGAAAGGTGTATACGATGCATTGCAGAAGAAATACCTGAAAACACTTTTATTCTGCGTGTGCGAAACGGTTGAAGGACCAATGATTGAGGAATACACTTTTTCTTTTAGTTACTCAAATTCTGAAAGCCAGGAGGTTTCGATGAATATAAGTCGCTCTGGGAACAAGAAAGAGGGTGGAACATTCAAGTGCAACTCCACAGCAGAAATTACTCCCAACCAGATGAGGAGTTCTGCTTGTAAAATGGTCCGCACATTGGTTCAATCGATGAGAACTCTTGATAAAATGCCTGAAGAGCGAACAATACTGATGAAGCTCCTGTATTATGATGATGTGACGCTAGCGGAGTATGAGCCTCCATTCTTCAGGAGCTGCTCTGAGGAAGAAGCTCGTAATGCATGGGCCAAGAATCCTTTGAGAATGGAGGTTGGGAATGTAAACAGCAAGCATCTTGTATTAGTGCTGAAGGTAAAGAGCATCCTTGATCCTTGTGAGGACGAAAATGATGATATTCAAGATGATGAAGTGAGCTTAGGAGCTGATTCTATGCAAAGGGATGATTATTCGGAATCTGATTCTGACAGTGAGCTTAACCAATCACAAAACGATCGTTATATAGTTGCTCCAGTAGATAAGCAACTACAGAAAGATAACAGCGCACCACAGGAAGATAACAACATGGTTGATGAAGATAATACTCAGGATTCAGTGCAAGACGAACAACAACTGGCTCGGATAAAGGACTGGATCAGTAGCCTTCACCTTGACACTGTTGAACTTACTGATGTTCTCTCAAATTTCCCGGACATCTCAGTGGTTCTGACTGAAGATTTGCTACTTTCAATCCGATTTGGCTGGATCACAGAAATTATGGACAAGCTTGTCATAGAAGGTGTTCTATTGAAATCTACAGGGGACACTTACACTTTCAACAGGCCGAAGAAGTCCGATTATGAGTTCACTGTGGTGAAAGAAGAAATGGATGGTCAAGTACCAGTTGCTGACAGAACTCCAAAGGTTAATGATCTCATGTACATGAAGGTGCTTTATCATGCTCTTCCAATGCAGTATGTGACGGTTACAAAGCTTCAGAACAAGCTCGGTGGAGAGGTGAATCAGACTACTGTGCGCAAGTTCATTGATAAAATGGCACGAGAGGGTTTCCTTGAAGCCAAAGGCAACCGAAGGCTAGGGAAGCGTGTTATCCGTTCTGAGATTGCTGAGAAAAAGCTGACTGAAGTGAAGAAAGCTCTGAACAATGATGCAATGGATGTGGACAACACTGAACCAAATAACAAATCCAATCATCTGGATTTCCATACAAGGGGAAGCAACATCAGGGACACATCCACATGCGGCGTCCTCCATTCCATCGGATCAGATCTCACACGAATGAGAATAAAATCGAACGGACCTCATTACAGTCCAATGAGGAGTGAGCAGACTACTTCAAAGGCAAAGGAGCATCCAAACACTCCCACAAGCAGGGCTCAGCCAGTGACTTCAAGGGAGAGCATTGTGCCGGGAAATGATAACGGCAGAGCAAATGGCAACACTGGTTACTGTGACGATGGGGACGGAGTGATCTGCAGTGGAAGGTCTAGCCAAGACAAGCGGTCGAGGAAAACAAGCACGGTGAAGGAGCCAATTCTTCAGTACTTGAAGCGCCAGAAGTCTCAAGCCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000785 GO:0000793 GO:0000794 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009554 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0034293 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043934 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048236 GO:0048285 GO:0048856 GO:0048869 GO:0051026 GO:0051276 GO:0051321 GO:0051704 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HORMA

Protein Analysis

698

Amino Acids

78.73

Weight (kDa)

5.31

Isoelectric Point (pI)

48.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HORMA	PF02301	79 - 285	1.4e-61	HORMA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67370
fragaria_vesca	FvH4_2g22740 FvH4_4g23791 FvH4_4g23791 FvH4_4g23800
malus_domestica	MD13G1118700.v1.1 MD16G1118900.v1.1
prunus_persica	Prupe.1G226200_v2.0.a1 Prupe.1G226200_v2.0.a1
pyrus_communis	pycom13g10360 pycom16g10180
rosa_chinensis	RchiOBHm_Chr4g0430291 RchiOBHm_Chr4g0430321 RchiOBHm_Chr4g0430341
rosa_laevigata	RLG00000006983 RLG00000006985 RLG00000006987
rosa_multiflora	Rmu_co8441339.1_g000001 Rmu_sc0000131.1_g000059 Rmu_sc0001089.1_g000027 Rmu_sc0002248.1_g000047 Rmu_sc0020995.1_g000013
rosa_roxburghii	Rroxscaffold_5G00372090 Rroxscaffold_5G00372110
rosa_rugosa	Rorug04G0242500 Rorug04G0242600
rosa_samantha	Rh4AG226000 Rh4AG298900 Rh4BG305500 Rh4CG240300 Rh4CG321000 Rh4CG321400
rosa_wichuraiana	Rw4G025920 Rw4G025930 Rw4G025940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1286
Acc16I	TGCGCA	1 cut(s)	1535
Acc36I	ACCTGC	2 cut(s)	89, 264
Acc65I	GGTACC	1 cut(s)	146
AccB1I	GGYRCC	2 cut(s)	131, 146
AccI	GTMKAC	1 cut(s)	417
AciI	CCGC	7 cut(s)	5, 188, 215, 655, 749, 1761, 2020
AclWI	GGATC	5 cut(s)	183, 884, 1160, 1271, 1789
AcsI	RAATTY	2 cut(s)	523, 1201
AcuI	CTGAAG	8 cut(s)	125, 717, 754, 890, 1251, 1478, 1662, 2042
AcyI	GRCGYC	1 cut(s)	1764
AfaI	GTAC	5 cut(s)	148, 314, 1398, 1439, 2063
AfiI	CCNNNNNNNGG	3 cut(s)	661, 1729, 1890
AgeI	ACCGGT	1 cut(s)	123
AhdI	GACNNNNNGTC	1 cut(s)	2020
AjnI	CCWGG	1 cut(s)	534
AleI	CACNNNNGTG	1 cut(s)	1370
Alw26I	GTCTC	2 cut(s)	387, 2085
AlwI	GGATC	5 cut(s)	183, 884, 1160, 1271, 1789
AlwNI	CAGNNNCTG	2 cut(s)	777, 1406
AoxI	GGCC	3 cut(s)	295, 807, 1340
ApeKI	GCWGC	1 cut(s)	777
ApoI	RAATTY	2 cut(s)	523, 1201
ArsI	GACNNNNNNTTYG	2 cut(s)	1219, 1251
AsiGI	ACCGGT	1 cut(s)	123
Asp700I	GAANNNNTTC	2 cut(s)	314, 1299
Asp718I	GGTACC	1 cut(s)	146
AspLEI	GCGC	4 cut(s)	98, 1064, 1536, 2073
AspS9I	GGNCC	6 cut(s)	29, 126, 482, 652, 807, 1817
AsuC2I	CCSGG	3 cut(s)	151, 1208, 1929
AsuHPI	GGTGA	7 cut(s)	50, 214, 217, 1157, 1384, 1528, 2053
AsuNHI	GCTAGC	1 cut(s)	745
AvaII	GGWCC	5 cut(s)	29, 126, 482, 652, 1817
BanI	GGYRCC	2 cut(s)	131, 146
BanII	GRGCYC	1 cut(s)	1897
BarI	GAAGNNNNNNTAC	4 cut(s)	98, 130, 1224, 1256
BauI	CACGAG	1 cut(s)	1557
BbvI	GCAGC	1 cut(s)	764
BccI	CCATC	5 cut(s)	59, 397, 1382, 1784, 1970
BceAI	ACGGC	2 cut(s)	1957, 2072
BcgI	CGANNNNNNTGC	2 cut(s)	238, 272
BciT130I	CCWGG	1 cut(s)	536
BcnI	CCSGG	3 cut(s)	151, 1208, 1929
BcoDI	GTCTC	2 cut(s)	387, 2085
BfaI	CTAG	3 cut(s)	746, 1595, 2007
BfmI	CTRYAG	3 cut(s)	1046, 1314, 1993
BfoI	RGCGCY	1 cut(s)	2074
BfuAI	ACCTGC	2 cut(s)	89, 264
BglII	AGATCT	1 cut(s)	1786
BisI	GCNGC	2 cut(s)	778, 1762
BlpI	GCTNAGC	1 cut(s)	1896
BlsI	GCNGC	2 cut(s)	779, 1763
BmcAI	AGTACT	2 cut(s)	314, 2063
Bme1390I	CCNGG	4 cut(s)	151, 536, 1208, 1929
Bme18I	GGWCC	5 cut(s)	29, 126, 482, 652, 1817
BmeRI	GACNNNNNGTC	1 cut(s)	2020
BmgT120I	GGNCC	6 cut(s)	29, 126, 482, 652, 807, 1817
BmiI	GGNNCC	5 cut(s)	30, 133, 148, 254, 2049
BmrFI	CCNGG	4 cut(s)	151, 536, 1208, 1929
BmsI	GCATC	6 cut(s)	364, 412, 862, 891, 1657, 1879
BmtI	GCTAGC	1 cut(s)	749
BplI	GAGNNNNNCTC	2 cut(s)	218, 250
BpmI	CTGGAG	2 cut(s)	45, 1014
Bpu10I	CCTNAGC	1 cut(s)	937
Bpu1102I	GCTNAGC	1 cut(s)	1896
BpuEI	CTTGAG	1 cut(s)	2067
BpuMI	CCSGG	3 cut(s)	151, 1208, 1929
Bsa29I	ATCGAT	1 cut(s)	671
BsaHI	GRCGYC	1 cut(s)	1764
BsaWI	WCCGGW	2 cut(s)	123, 128
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	3 cut(s)	661, 1729, 1890
Bse118I	RCCGGY	1 cut(s)	123
Bse1I	ACTGG	7 cut(s)	148, 1031, 1137, 1154, 1400, 1901, 1966
Bse3DI	GCAATG	2 cut(s)	425, 1677
BseBI	CCWGG	1 cut(s)	536
BseCI	ATCGAT	1 cut(s)	671
BseGI	GGATG	9 cut(s)	75, 379, 408, 882, 967, 1393, 1681, 1751, 1870
BseLI	CCNNNNNNNGG	3 cut(s)	661, 1729, 1890
BseMI	GCAATG	2 cut(s)	425, 1677
BseMII	CTCAG	8 cut(s)	72, 369, 774, 1118, 1230, 1608, 1617, 1910
BseNI	ACTGG	7 cut(s)	148, 1031, 1137, 1154, 1400, 1901, 1966
BseRI	GAGGAG	3 cut(s)	56, 646, 1852
BseXI	GCAGC	1 cut(s)	764
Bsh1285I	CGRYCG	3 cut(s)	192, 1015, 2024
BshFI	GGCC	3 cut(s)	297, 809, 1342
BshNI	GGYRCC	2 cut(s)	131, 146
BshTI	ACCGGT	1 cut(s)	123
BshVI	ATCGAT	1 cut(s)	671
BsiEI	CGRYCG	3 cut(s)	192, 1015, 2024
BsiSI	CCGG	5 cut(s)	124, 129, 150, 1208, 1928
BslFI	GGGAC	4 cut(s)	42, 1334, 1760, 1994
BslI	CCNNNNNNNGG	3 cut(s)	661, 1729, 1890
BsmAI	GTCTC	2 cut(s)	387, 2085
BsmFI	GGGAC	4 cut(s)	42, 1334, 1760, 1994
BsnI	GGCC	3 cut(s)	297, 809, 1342
Bsp1286I	GDGCHC	1 cut(s)	1897
Bsp1407I	TGTACA	1 cut(s)	1437
Bsp1720I	GCTNAGC	1 cut(s)	1896
BspACI	CCGC	7 cut(s)	5, 188, 215, 655, 749, 1761, 2020
BspANI	GGCC	3 cut(s)	297, 809, 1342
BspCNI	CTCAG	8 cut(s)	73, 370, 775, 1117, 1229, 1609, 1618, 1909
BspDI	ATCGAT	1 cut(s)	671
BspLI	GGNNCC	5 cut(s)	30, 133, 148, 254, 2049
BspMAI	CTGCAG	1 cut(s)	1997
BspMI	ACCTGC	2 cut(s)	89, 264
BspOI	GCTAGC	1 cut(s)	749
BspPI	GGATC	5 cut(s)	183, 884, 1160, 1271, 1789
BspQI	GCTCTTC	2 cut(s)	693, 1467
BspT107I	GGYRCC	2 cut(s)	131, 146
BsrDI	GCAATG	2 cut(s)	425, 1677
BsrFI	RCCGGY	1 cut(s)	123
BsrGI	TGTACA	1 cut(s)	1437
BsrI	ACTGG	7 cut(s)	148, 1031, 1137, 1154, 1400, 1901, 1966
BssAI	RCCGGY	1 cut(s)	123
BssNAI	GTATAC	1 cut(s)	418
BssNI	GRCGYC	1 cut(s)	1764
BssSI	CACGAG	1 cut(s)	1557
Bst1107I	GTATAC	1 cut(s)	418
Bst2BI	CACGAG	1 cut(s)	1557
Bst2UI	CCWGG	1 cut(s)	536
Bst6I	CTCTTC	2 cut(s)	693, 1467
BstACI	GRCGYC	1 cut(s)	1764
BstAUI	TGTACA	1 cut(s)	1437
BstC8I	GCNNGC	4 cut(s)	136, 389, 747, 851
BstDEI	CTNAG	9 cut(s)	81, 378, 783, 937, 1104, 1216, 1617, 1626, 1896
BstF5I	GGATG	9 cut(s)	75, 379, 408, 882, 967, 1393, 1681, 1751, 1870
BstH2I	RGCGCY	1 cut(s)	2074
BstHHI	GCGC	4 cut(s)	98, 1064, 1536, 2073
BstMAI	GTCTC	2 cut(s)	387, 2085
BstMCI	CGRYCG	3 cut(s)	192, 1015, 2024
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 194, 235, 700, 800, 1600
BstNI	CCWGG	1 cut(s)	536
BstNSI	RCATGY	1 cut(s)	1761
BstSCI	CCNGG	4 cut(s)	149, 534, 1206, 1927
BstSFI	CTRYAG	3 cut(s)	1046, 1314, 1993
BstV1I	GCAGC	1 cut(s)	764
BstX2I	RGATCY	1 cut(s)	1786
BstXI	CCANNNNNNTGG	1 cut(s)	1714
BstYI	RGATCY	1 cut(s)	1786
BstZ17I	GTATAC	1 cut(s)	418
Bsu15I	ATCGAT	1 cut(s)	671
BsuRI	GGCC	3 cut(s)	297, 809, 1342
BsuTUI	ATCGAT	1 cut(s)	671
BtsCI	GGATG	9 cut(s)	75, 379, 408, 882, 967, 1393, 1681, 1751, 1870
BtsI	GCAGTG	1 cut(s)	2002
BtsIMutI	CAGTG	9 cut(s)	994, 1119, 1173, 1224, 1365, 1686, 1908, 1959, 2002
BveI	ACCTGC	2 cut(s)	89, 264
Cac8I	GCNNGC	4 cut(s)	136, 389, 747, 851
CaiI	CAGNNNCTG	2 cut(s)	777, 1406
CfoI	GCGC	4 cut(s)	98, 1064, 1536, 2073
Cfr10I	RCCGGY	1 cut(s)	123
Cfr13I	GGNCC	6 cut(s)	29, 126, 482, 652, 807, 1817
ClaI	ATCGAT	1 cut(s)	671
CpoI	CGGWCCG	1 cut(s)	126
CseI	GACGC	2 cut(s)	751, 1753
Csp6I	GTAC	5 cut(s)	147, 313, 1397, 1438, 2062
CspAI	ACCGGT	1 cut(s)	123
CspCI	CAANNNNNGTGG	4 cut(s)	1489, 1524, 1659, 1694
CspI	CGGWCCG	1 cut(s)	126
CviAII	CATG	6 cut(s)	804, 1084, 1435, 1441, 1457, 1758
CviQI	GTAC	5 cut(s)	147, 313, 1397, 1438, 2062
DdeI	CTNAG	9 cut(s)	81, 378, 783, 937, 1104, 1216, 1617, 1626, 1896
DrdI	GACNNNNNNGTC	1 cut(s)	1286
DriI	GACNNNNNGTC	1 cut(s)	2020
DseDI	GACNNNNNNGTC	1 cut(s)	1286
Eam1104I	CTCTTC	2 cut(s)	693, 1467
Eam1105I	GACNNNNNGTC	1 cut(s)	2020
EarI	CTCTTC	2 cut(s)	693, 1467
Eco147I	AGGCCT	1 cut(s)	297
Eco24I	GRGCYC	1 cut(s)	1897
Eco47I	GGWCC	5 cut(s)	29, 126, 482, 652, 1817
Eco57I	CTGAAG	8 cut(s)	125, 717, 754, 890, 1251, 1478, 1662, 2042
EcoRII	CCWGG	1 cut(s)	534
EcoT22I	ATGCAT	2 cut(s)	427, 805
EcoT38I	GRGCYC	1 cut(s)	1897
FaeI	CATG	6 cut(s)	807, 1087, 1438, 1444, 1460, 1761
FaqI	GGGAC	4 cut(s)	42, 1334, 1760, 1994
FatI	CATG	6 cut(s)	803, 1083, 1434, 1440, 1456, 1757
FblI	GTMKAC	1 cut(s)	417
Fnu4HI	GCNGC	2 cut(s)	778, 1762
FokI	GGATG	9 cut(s)	62, 386, 415, 869, 974, 1400, 1688, 1738, 1857
FriOI	GRGCYC	1 cut(s)	1897
Fsp4HI	GCNGC	2 cut(s)	778, 1762
FspBI	CTAG	3 cut(s)	746, 1595, 2007
FspI	TGCGCA	1 cut(s)	1535
GlaI	GCGC	4 cut(s)	97, 1063, 1535, 2072
GluI	GCNGC	2 cut(s)	778, 1762
GsuI	CTGGAG	2 cut(s)	45, 1014
HaeII	RGCGCY	1 cut(s)	2074
HaeIII	GGCC	3 cut(s)	297, 809, 1342
HapII	CCGG	5 cut(s)	124, 129, 150, 1208, 1928
HgaI	GACGC	2 cut(s)	751, 1753
HhaI	GCGC	4 cut(s)	98, 1064, 1536, 2073
Hin1I	GRCGYC	1 cut(s)	1764
Hin1II	CATG	6 cut(s)	807, 1087, 1438, 1444, 1460, 1761
Hin6I	GCGC	4 cut(s)	96, 1062, 1534, 2071
HinP1I	GCGC	4 cut(s)	96, 1062, 1534, 2071
HindIII	AAGCTT	2 cut(s)	1283, 1490
HinfI	GANTC	9 cut(s)	83, 233, 380, 814, 947, 974, 980, 1109, 1519
HpaII	CCGG	5 cut(s)	124, 129, 150, 1208, 1928
HphI	GGTGA	7 cut(s)	50, 214, 217, 1157, 1384, 1528, 2053
Hpy166II	GTNNAC	6 cut(s)	10, 73, 418, 844, 1365, 1681
Hpy188III	TCNNGA	8 cut(s)	62, 305, 395, 683, 772, 920, 1106, 1715
Hpy8I	GTNNAC	6 cut(s)	10, 73, 418, 844, 1365, 1681
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	9 cut(s)	202, 473, 865, 1172, 1289, 1438, 1584, 1995, 2038
HpyCH4V	TGCA	9 cut(s)	425, 430, 597, 803, 955, 1117, 1471, 1670, 1995
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 194, 235, 700, 800, 1600
HpyF3I	CTNAG	9 cut(s)	81, 378, 783, 937, 1104, 1216, 1617, 1626, 1896
Hsp92I	GRCGYC	1 cut(s)	1764
Hsp92II	CATG	6 cut(s)	807, 1087, 1438, 1444, 1460, 1761
HspAI	GCGC	4 cut(s)	96, 1062, 1534, 2071
KpnI	GGTACC	1 cut(s)	150
LguI	GCTCTTC	2 cut(s)	693, 1467
LmnI	GCTCC	7 cut(s)	64, 726, 774, 941, 1033, 1867, 2047
Lsp1109I	GCAGC	1 cut(s)	764
LweI	GCATC	6 cut(s)	364, 412, 862, 891, 1657, 1879
MaeI	CTAG	3 cut(s)	746, 1595, 2007
MaeIII	GTNAC	8 cut(s)	284, 515, 739, 1477, 1483, 1903, 1964, 1970
MflI	RGATCY	1 cut(s)	1786
MhlI	GDGCHC	1 cut(s)	1897
MluCI	AATT	5 cut(s)	523, 612, 1201, 1272, 2052
MlyI	GAGTC	3 cut(s)	92, 227, 389
Mph1103I	ATGCAT	2 cut(s)	427, 805
MroXI	GAANNNNTTC	2 cut(s)	314, 1299
MseI	TTAA	2 cut(s)	996, 1425
MslI	CAYNNNNRTG	7 cut(s)	592, 1217, 1370, 1439, 1445, 1756, 1796
MspA1I	CMGCKG	1 cut(s)	89
MspI	CCGG	5 cut(s)	124, 129, 150, 1208, 1928
MspR9I	CCNGG	4 cut(s)	151, 536, 1208, 1929
MvaI	CCWGG	1 cut(s)	536
MwoI	GCNNNNNNNGC	6 cut(s)	95, 194, 235, 700, 800, 1600
NciI	CCSGG	3 cut(s)	151, 1208, 1929
NheI	GCTAGC	1 cut(s)	745
NlaIII	CATG	6 cut(s)	807, 1087, 1438, 1444, 1460, 1761
NlaIV	GGNNCC	5 cut(s)	30, 133, 148, 254, 2049
NmuCI	GTSAC	4 cut(s)	739, 1477, 1903, 1970
NsbI	TGCGCA	1 cut(s)	1535
NsiI	ATGCAT	2 cut(s)	427, 805
NspI	RCATGY	1 cut(s)	1761
OliI	CACNNNNGTG	1 cut(s)	1370
PceI	AGGCCT	1 cut(s)	297
PciSI	GCTCTTC	2 cut(s)	693, 1467
PdmI	GAANNNNTTC	2 cut(s)	314, 1299
PfeI	GAWTC	6 cut(s)	814, 947, 974, 980, 1109, 1519
PfoI	TCCNGGA	1 cut(s)	1206
PinAI	ACCGGT	1 cut(s)	123
PkrI	GCNGC	2 cut(s)	779, 1763
Ple19I	CGATCG	1 cut(s)	1015
PleI	GAGTC	3 cut(s)	91, 227, 388
PpsI	GAGTC	3 cut(s)	91, 227, 388
Psp6I	CCWGG	1 cut(s)	534
PspGI	CCWGG	1 cut(s)	534
PspN4I	GGNNCC	5 cut(s)	30, 133, 148, 254, 2049
PspPI	GGNCC	6 cut(s)	29, 126, 482, 652, 807, 1817
PstI	CTGCAG	1 cut(s)	1997
PstNI	CAGNNNCTG	2 cut(s)	777, 1406
PsuI	RGATCY	1 cut(s)	1786
PvuI	CGATCG	1 cut(s)	1015
PvuII	CAGCTG	1 cut(s)	89
RsaI	GTAC	5 cut(s)	148, 314, 1398, 1439, 2063
RsaNI	GTAC	5 cut(s)	147, 313, 1397, 1438, 2062
RseI	CAYNNNNRTG	7 cut(s)	592, 1217, 1370, 1439, 1445, 1756, 1796
Rsr2I	CGGWCCG	1 cut(s)	126
RsrII	CGGWCCG	1 cut(s)	126
SapI	GCTCTTC	2 cut(s)	693, 1467
SaqAI	TTAA	2 cut(s)	996, 1425
SatI	GCNGC	2 cut(s)	778, 1762
Sau96I	GGNCC	6 cut(s)	29, 126, 482, 652, 807, 1817
ScaI	AGTACT	2 cut(s)	314, 2063
SchI	GAGTC	3 cut(s)	92, 227, 389
ScrFI	CCNGG	4 cut(s)	151, 536, 1208, 1929
SduI	GDGCHC	1 cut(s)	1897
SfaNI	GCATC	6 cut(s)	364, 412, 862, 891, 1657, 1879
SfcI	CTRYAG	3 cut(s)	1046, 1314, 1993
SinI	GGWCC	5 cut(s)	29, 126, 482, 652, 1817
SmiMI	CAYNNNNRTG	7 cut(s)	592, 1217, 1370, 1439, 1445, 1756, 1796
SmlI	CTYRAG	1 cut(s)	2082
SmoI	CTYRAG	1 cut(s)	2082
Sse9I	AATT	5 cut(s)	523, 612, 1201, 1272, 2052
SseBI	AGGCCT	1 cut(s)	297
SsiI	CCGC	7 cut(s)	5, 188, 215, 655, 749, 1761, 2020
SspMI	CTAG	3 cut(s)	746, 1595, 2007
StuI	AGGCCT	1 cut(s)	297
StyD4I	CCNGG	4 cut(s)	149, 534, 1206, 1927
TaqI	TCGA	4 cut(s)	545, 671, 1811, 2024
TasI	AATT	5 cut(s)	523, 612, 1201, 1272, 2052
TatI	WGTACW	3 cut(s)	312, 1437, 2061
TauI	GCSGC	1 cut(s)	1764
TfiI	GAWTC	6 cut(s)	814, 947, 974, 980, 1109, 1519
Tru1I	TTAA	2 cut(s)	996, 1425
Tru9I	TTAA	2 cut(s)	996, 1425
TscAI	CASTG	9 cut(s)	994, 1119, 1180, 1224, 1372, 1693, 1908, 1966, 2002
TseFI	GTSAC	4 cut(s)	739, 1477, 1903, 1970
TseI	GCWGC	1 cut(s)	777
Tsp45I	GTSAC	4 cut(s)	739, 1477, 1903, 1970
TspDTI	ATGAA	7 cut(s)	362, 563, 731, 942, 1107, 1457, 1531
TspGWI	ACGGA	3 cut(s)	1601, 1830, 1998
TspRI	CASTG	9 cut(s)	994, 1119, 1180, 1224, 1372, 1693, 1908, 1966, 2002
VpaK11BI	GGWCC	5 cut(s)	29, 126, 482, 652, 1817
XapI	RAATTY	2 cut(s)	523, 1201
XceI	RCATGY	1 cut(s)	1761
XmiI	GTMKAC	1 cut(s)	417
XmnI	GAANNNNTTC	2 cut(s)	314, 1299
XspI	CTAG	3 cut(s)	746, 1595, 2007
ZrmI	AGTACT	2 cut(s)	314, 2063
Zsp2I	ATGCAT	2 cut(s)	427, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.