Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0003652

Physical Location & Seq

Genomic Coordinates Reverse (-)

52041026 .. 52045985

Gene Structure 4960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G025920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGTTGTGGCGCAAAAACTGAAGGAGGCGGAGATTACCGAGCAGGACTCCCTTCTTCTGACGAGGAACCTGCTTCGCATCGCTATATTCAATATCAGTTACATCCGAGGCCTTTTTCCGGAGAAGTATTTCAACGATAAATCTGTTCCTGCTTTAGAGATGAAGATCAAAAAGCTAATGCCAGTGGATGCAGAGTCTCGCAGACTTATTGATTGGATGGAGAAAGGTGTATACGACGCCTTGCAGAAGAAGTACCTGAAAACGCTTTTGTTCTGTGTGTGTGAAGACGTTGAAGGGCCGATGATAGAGGAATACACATTTTCTTTCAGCTATTCAAAATCTGAAAATCAGGAGTTTTCAATGAATATCAATCGATCCGGGAATAAGAAACAGGGTGGAACATTCAAGTATAACTCCACAACAGAAATTACACCCAACCAGATGAGGAGTTCTGCTTGTAAAATGGTCCGCACACTGGTTCAGCTGATGAGAACTTTGGATAGAATGCCAGAAGAGCGCACCATTCTGATGAAACTCCTATACTATGATGATGTCACGCCAGCAGATTATGAGCCTCCATTCTTCAGAGGCTGCACAGAAGAAGAAACTCGAAACTCATGGACCAAGAATCCTTTGAAAATGGAAGTTGGAAATGTAAACAGCAAGCATCTTGTCTTAGCTCTCAAGGTAAAGAGCGTGCTTGATTCCTGTGAGGATGAAAATGATGATATTCAAGATGATGAAGTGAGCTTAGGAGATGACTCCATGCAAATGGATGGCTCTTCTGAATCTGACAGTGAGGTGAATCAATCACAAGACGACCAATATATAGTTGTTCCTGCAGCTAAGCATCAACCACAGGAAGATAACAGCATACTTAAGGAAGATAATTGCATGGATGGTGAAGCTACAGATGATACTCAGGATCCAGAGGAAGATGAACAGCAATTTTCCCGGATAAAGAACTGGATCAGTAGTTGCCATCTTGACACTGTTGAAGTTACCGATGTTCTTTCGAATTTCCCAGACATTTCAGTGGTTCTAACTGAAGAAATTATGGACAAGCTTGTTGTGGAAGGCATTCTATCAAAAGCTGGAGGGGACACTTACACTATTAACAGGCAGAAGAAGTCTGATTATGAGTTCACTGTCGTGAAACAAGAAATTAATAGTCAAGCAGTCCTGGTTGGTGACAAAACTCCGATGTCTAATGATCACATGTACATGAAGGCGCTGTGTCATGCTCTTCCTATGCAGTATGTGTCAGTCGCAAAGCTTCAGAACAAGCTTGGAGGAGAAGCAAATCAGAGTACAGTGCGGAAGATGCTTGATAAGATGGCACAAGAAGGTTTTGTTGAAGCCAAAGGCAACCGAAGGCTAGGAAAGCGTGTGATCCATTCTGATGTTACTGAGAAGAAACTTATTGAAGTCCATAAAGCTTTGAATTTTGATGCAATGGATGTTGACAACGTTGAACCACCAAGCAAGTCCAATCATCAAGACATTCATCCAATGGGAAGCAACTACAGAGACACATCCACATGTGGTGTGCTCCGCTCGATTGGATCAGATCTCACACGCATGAGAATAAGGCCTAATTCACAGGAATATAGTCCAAACAGGAGTGAGCAGACTACTTCAAAGACAAAGGAGCAGGGAAACACTCCCACGAGCAGGGCGCAGCCAGTAATTTCAAGAGAGAGCTTTGCACCTGGCAATGATGATATTAGAGCCAATGGCAACACAAATCACTGTGACGATGGGGAGAGAGTGGCCTGTAGTAGTATTTCCACCCAAGGCAAACGTTCCAGGAAAACAAGCACAGTGAAGGAGCCTATTCTTCAGTACGCAAAGCGCCAGAGATCGCAAGCTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000785 GO:0000793 GO:0000794 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009554 GO:0009555 GO:0009556 GO:0009987 GO:0016043 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0034293 GO:0034641 GO:0035825 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043934 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0044703 GO:0045132 GO:0045143 GO:0046483 GO:0048229 GO:0048236 GO:0048285 GO:0048856 GO:0048869 GO:0051026 GO:0051276 GO:0051321 GO:0051704 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HORMA

Protein Analysis

625

Amino Acids

70.86

Weight (kDa)

5.26

Isoelectric Point (pI)

56.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HORMA	PF02301	17 - 223	1.1e-64	HORMA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003652)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67370
fragaria_vesca	FvH4_2g22740 FvH4_4g23791 FvH4_4g23791 FvH4_4g23800
malus_domestica	MD13G1118700.v1.1 MD16G1118900.v1.1
prunus_persica	Prupe.1G226200_v2.0.a1 Prupe.1G226200_v2.0.a1
pyrus_communis	pycom13g10360 pycom16g10180
rosa_chinensis	RchiOBHm_Chr4g0430291 RchiOBHm_Chr4g0430321 RchiOBHm_Chr4g0430341
rosa_laevigata	RLG00000006983 RLG00000006985 RLG00000006987
rosa_multiflora	Rmu_co8441339.1_g000001 Rmu_sc0000131.1_g000059 Rmu_sc0001089.1_g000027 Rmu_sc0002248.1_g000047 Rmu_sc0020995.1_g000013
rosa_roxburghii	Rroxscaffold_5G00372090 Rroxscaffold_5G00372110
rosa_rugosa	Rorug04G0242500 Rorug04G0242600
rosa_samantha	Rh4AG226000 Rh4AG298900 Rh4BG305500 Rh4CG240300 Rh4CG321000 Rh4CG321400
rosa_wichuraiana	Rw4G025920 Rw4G025930 Rw4G025940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	78
AccBSI	CCGCTC	1 cut(s)	1557
AccI	GTMKAC	1 cut(s)	231
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	4 cut(s)	29, 469, 1318, 1555
AclI	AACGTT	2 cut(s)	1470, 1804
AclWI	GGATC	6 cut(s)	369, 920, 933, 977, 1387, 1573
AcsI	RAATTY	2 cut(s)	1018, 1444
AcuI	CTGAAG	5 cut(s)	41, 568, 1068, 1262, 1826
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	4 cut(s)	254, 1223, 1312, 1847
AfiI	CCNNNNNNNGG	3 cut(s)	118, 475, 1674
AflII	CTTAAG	1 cut(s)	878
AflIII	ACRYGT	2 cut(s)	1218, 1541
AjnI	CCWGG	3 cut(s)	1182, 1711, 1808
AleI	CACNNNNGTG	1 cut(s)	1151
Alw21I	GWGCWC	1 cut(s)	1554
Alw26I	GTCTC	2 cut(s)	201, 1524
AlwI	GGATC	6 cut(s)	369, 920, 933, 977, 1387, 1573
AlwNI	CAGNNNCTG	1 cut(s)	591
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	4 cut(s)	109, 296, 1592, 1773
ApeKI	GCWGC	3 cut(s)	591, 842, 1681
ApoI	RAATTY	2 cut(s)	1018, 1444
AseI	ATTAAT	1 cut(s)	1167
Asp700I	GAANNNNTTC	2 cut(s)	128, 1080
AspLEI	GCGC	5 cut(s)	13, 519, 1234, 1681, 1857
AspS9I	GGNCC	3 cut(s)	296, 466, 621
AsuC2I	CCSGG	2 cut(s)	379, 955
AsuHPI	GGTGA	3 cut(s)	814, 914, 1202
AsuII	TTCGAA	1 cut(s)	1016
AvaII	GGWCC	2 cut(s)	466, 621
BamHI	GGATCC	1 cut(s)	925
BauI	CACGAG	1 cut(s)	1669
BbsI	GAAGAC	1 cut(s)	291
Bbv12I	GWGCWC	1 cut(s)	1554
BbvI	GCAGC	3 cut(s)	578, 854, 1693
BccI	CCATC	6 cut(s)	211, 770, 893, 990, 1330, 1754
BcgI	CGANNNNNNTGC	2 cut(s)	52, 86
BciT130I	CCWGG	3 cut(s)	1184, 1713, 1810
BclI	TGATCA	1 cut(s)	1213
BcnI	CCSGG	2 cut(s)	379, 955
BcoDI	GTCTC	2 cut(s)	201, 1524
BfaI	CTAG	1 cut(s)	1379
BfmI	CTRYAG	4 cut(s)	840, 909, 1525, 1777
BfoI	RGCGCY	2 cut(s)	1235, 1858
BfrI	CTTAAG	1 cut(s)	878
BfuAI	ACCTGC	1 cut(s)	78
BglII	AGATCT	1 cut(s)	1570
BisI	GCNGC	3 cut(s)	592, 843, 1682
BlpI	GCTNAGC	1 cut(s)	846
BlsI	GCNGC	3 cut(s)	593, 844, 1683
Bme1390I	CCNGG	5 cut(s)	379, 955, 1184, 1713, 1810
Bme18I	GGWCC	2 cut(s)	466, 621
BmgT120I	GGNCC	3 cut(s)	296, 466, 621
BmiI	GGNNCC	3 cut(s)	68, 927, 1833
BmrFI	CCNGG	5 cut(s)	379, 955, 1184, 1713, 1810
BmsI	GCATC	6 cut(s)	87, 178, 676, 859, 1314, 1441
BpiI	GAAGAC	1 cut(s)	291
BplI	GAGNNNNNCTC	2 cut(s)	32, 64
BpmI	CTGGAG	1 cut(s)	1116
Bpu10I	CCTNAGC	1 cut(s)	751
Bpu1102I	GCTNAGC	1 cut(s)	846
Bpu14I	TTCGAA	1 cut(s)	1016
BpuEI	CTTGAG	1 cut(s)	668
BpuMI	CCSGG	2 cut(s)	379, 955
Bsa29I	ATCGAT	1 cut(s)	373
BsaBI	GATNNNNATC	1 cut(s)	164
BsaHI	GRCGYC	1 cut(s)	237
BsaJI	CCNNGG	2 cut(s)	106, 1795
BsaWI	WCCGGW	1 cut(s)	118
Bsc4I	CCNNNNNNNGG	3 cut(s)	118, 475, 1674
Bse1I	ACTGG	4 cut(s)	182, 480, 971, 1685
Bse3DI	GCAATG	2 cut(s)	1461, 1723
Bse8I	GATNNNNATC	1 cut(s)	164
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	3 cut(s)	1184, 1713, 1810
BseCI	ATCGAT	1 cut(s)	373
BseDI	CCNNGG	2 cut(s)	106, 1795
BseGI	GGATG	9 cut(s)	102, 193, 222, 721, 781, 904, 1465, 1507, 1535
BseJI	GATNNNNATC	1 cut(s)	164
BseLI	CCNNNNNNNGG	3 cut(s)	118, 475, 1674
BseMI	GCAATG	2 cut(s)	1461, 1723
BseMII	CTCAG	2 cut(s)	935, 1401
BseNI	ACTGG	4 cut(s)	182, 480, 971, 1685
BseRI	GAGGAG	2 cut(s)	460, 1308
BseXI	GCAGC	3 cut(s)	578, 854, 1693
BsgI	GTGCAG	1 cut(s)	577
BshFI	GGCC	4 cut(s)	111, 298, 1594, 1775
BshVI	ATCGAT	1 cut(s)	373
BsiHKAI	GWGCWC	1 cut(s)	1554
BsiSI	CCGG	3 cut(s)	119, 378, 955
BslFI	GGGAC	1 cut(s)	1115
BslI	CCNNNNNNNGG	3 cut(s)	118, 475, 1674
BsmAI	GTCTC	2 cut(s)	201, 1524
BsmFI	GGGAC	1 cut(s)	1115
BsmI	GAATGC	2 cut(s)	510, 1080
BsnI	GGCC	4 cut(s)	111, 298, 1594, 1775
Bsp119I	TTCGAA	1 cut(s)	1016
Bsp1286I	GDGCHC	1 cut(s)	1554
Bsp13I	TCCGGA	1 cut(s)	118
Bsp1407I	TGTACA	1 cut(s)	1221
Bsp143I	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
Bsp1720I	GCTNAGC	1 cut(s)	846
BspACI	CCGC	4 cut(s)	29, 469, 1318, 1555
BspANI	GGCC	4 cut(s)	111, 298, 1594, 1775
BspCNI	CTCAG	2 cut(s)	934, 1402
BspDI	ATCGAT	1 cut(s)	373
BspEI	TCCGGA	1 cut(s)	118
BspLI	GGNNCC	3 cut(s)	68, 927, 1833
BspMAI	CTGCAG	1 cut(s)	844
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	6 cut(s)	369, 920, 933, 977, 1387, 1573
BspQI	GCTCTTC	3 cut(s)	507, 787, 1251
BspT104I	TTCGAA	1 cut(s)	1016
BspTI	CTTAAG	1 cut(s)	878
BsrBI	CCGCTC	1 cut(s)	1557
BsrDI	GCAATG	2 cut(s)	1461, 1723
BsrGI	TGTACA	1 cut(s)	1221
BsrI	ACTGG	4 cut(s)	182, 480, 971, 1685
BssECI	CCNNGG	2 cut(s)	106, 1795
BssMI	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
BssNAI	GTATAC	1 cut(s)	232
BssNI	GRCGYC	1 cut(s)	237
BssSI	CACGAG	1 cut(s)	1669
BssT1I	CCWWGG	1 cut(s)	1795
Bst1107I	GTATAC	1 cut(s)	232
Bst2BI	CACGAG	1 cut(s)	1669
Bst2UI	CCWGG	3 cut(s)	1184, 1713, 1810
Bst4CI	ACNGT	6 cut(s)	797, 994, 1150, 1315, 1754, 1825
Bst6I	CTCTTC	3 cut(s)	507, 787, 1251
BstACI	GRCGYC	1 cut(s)	237
BstAFI	CTTAAG	1 cut(s)	878
BstAUI	TGTACA	1 cut(s)	1221
BstBI	TTCGAA	1 cut(s)	1016
BstC8I	GCNNGC	4 cut(s)	561, 665, 698, 1869
BstDEI	CTNAG	5 cut(s)	676, 751, 846, 921, 1410
BstF5I	GGATG	9 cut(s)	102, 193, 222, 721, 781, 904, 1465, 1507, 1535
BstH2I	RGCGCY	2 cut(s)	1235, 1858
BstHHI	GCGC	5 cut(s)	13, 519, 1234, 1681, 1857
BstKTI	GATC	9 cut(s)	168, 377, 928, 972, 1216, 1395, 1568, 1573, 1865
BstMAI	GTCTC	2 cut(s)	201, 1524
BstMBI	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
BstMWI	GCNNNNNNNGC	3 cut(s)	514, 1324, 1384
BstNI	CCWGG	3 cut(s)	1184, 1713, 1810
BstNSI	RCATGY	2 cut(s)	1222, 1545
BstSCI	CCNGG	5 cut(s)	377, 953, 1182, 1711, 1808
BstSFI	CTRYAG	4 cut(s)	840, 909, 1525, 1777
BstV1I	GCAGC	3 cut(s)	578, 854, 1693
BstV2I	GAAGAC	1 cut(s)	291
BstX2I	RGATCY	2 cut(s)	925, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	772
BstYI	RGATCY	2 cut(s)	925, 1570
BstZ17I	GTATAC	1 cut(s)	232
Bsu15I	ATCGAT	1 cut(s)	373
BsuRI	GGCC	4 cut(s)	111, 298, 1594, 1775
BsuTUI	ATCGAT	1 cut(s)	373
BtgZI	GCGATG	1 cut(s)	64
BtsCI	GGATG	9 cut(s)	102, 193, 222, 721, 781, 904, 1465, 1507, 1535
BtsIMutI	CAGTG	9 cut(s)	189, 473, 802, 990, 1041, 1146, 1320, 1750, 1830
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	4 cut(s)	561, 665, 698, 1869
CaiI	CAGNNNCTG	1 cut(s)	591
CfoI	GCGC	5 cut(s)	13, 519, 1234, 1681, 1857
Cfr13I	GGNCC	3 cut(s)	296, 466, 621
ClaI	ATCGAT	1 cut(s)	373
CseI	GACGC	1 cut(s)	245
Csp6I	GTAC	4 cut(s)	253, 1222, 1311, 1846
CviAII	CATG	8 cut(s)	618, 766, 895, 1219, 1225, 1241, 1542, 1582
CviQI	GTAC	4 cut(s)	253, 1222, 1311, 1846
DdeI	CTNAG	5 cut(s)	676, 751, 846, 921, 1410
DpnI	GATC	9 cut(s)	167, 376, 927, 971, 1215, 1394, 1567, 1572, 1864
DpnII	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
Eam1104I	CTCTTC	3 cut(s)	507, 787, 1251
EarI	CTCTTC	3 cut(s)	507, 787, 1251
EciI	GGCGGA	1 cut(s)	44
Eco130I	CCWWGG	1 cut(s)	1795
Eco147I	AGGCCT	2 cut(s)	111, 1594
Eco47I	GGWCC	2 cut(s)	466, 621
Eco57I	CTGAAG	5 cut(s)	41, 568, 1068, 1262, 1826
EcoRII	CCWGG	3 cut(s)	1182, 1711, 1808
EcoT14I	CCWWGG	1 cut(s)	1795
ErhI	CCWWGG	1 cut(s)	1795
FaeI	CATG	8 cut(s)	621, 769, 898, 1222, 1228, 1244, 1545, 1585
FaqI	GGGAC	1 cut(s)	1115
FatI	CATG	8 cut(s)	617, 765, 894, 1218, 1224, 1240, 1541, 1581
FbaI	TGATCA	1 cut(s)	1213
FblI	GTMKAC	1 cut(s)	231
Fnu4HI	GCNGC	3 cut(s)	592, 843, 1682
FokI	GGATG	9 cut(s)	89, 200, 229, 728, 788, 911, 1472, 1494, 1522
Fsp4HI	GCNGC	3 cut(s)	592, 843, 1682
FspBI	CTAG	1 cut(s)	1379
GlaI	GCGC	5 cut(s)	12, 518, 1233, 1680, 1856
GluI	GCNGC	3 cut(s)	592, 843, 1682
GsuI	CTGGAG	1 cut(s)	1116
HaeII	RGCGCY	2 cut(s)	1235, 1858
HaeIII	GGCC	4 cut(s)	111, 298, 1594, 1775
HapII	CCGG	3 cut(s)	119, 378, 955
HgaI	GACGC	1 cut(s)	245
HhaI	GCGC	5 cut(s)	13, 519, 1234, 1681, 1857
Hin1I	GRCGYC	1 cut(s)	237
Hin1II	CATG	8 cut(s)	621, 769, 898, 1222, 1228, 1244, 1545, 1585
Hin6I	GCGC	5 cut(s)	11, 517, 1232, 1679, 1855
HinP1I	GCGC	5 cut(s)	11, 517, 1232, 1679, 1855
HincII	GTYRAC	1 cut(s)	1465
HindII	GTYRAC	1 cut(s)	1465
HindIII	AAGCTT	4 cut(s)	1064, 1274, 1286, 1437
HinfI	GANTC	7 cut(s)	47, 194, 628, 704, 761, 788, 805
HpaII	CCGG	3 cut(s)	119, 378, 955
HphI	GGTGA	3 cut(s)	814, 914, 1202
Hpy166II	GTNNAC	4 cut(s)	232, 658, 1146, 1465
Hpy188III	TCNNGA	9 cut(s)	119, 350, 734, 923, 929, 986, 1153, 1499, 1695
Hpy8I	GTNNAC	4 cut(s)	232, 658, 1146, 1465
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	8 cut(s)	16, 62, 287, 1070, 1222, 1340, 1368, 1822
HpyCH4III	ACNGT	6 cut(s)	797, 994, 1150, 1315, 1754, 1825
HpyCH4IV	ACGT	3 cut(s)	288, 1470, 1804
HpyCH4V	TGCA	9 cut(s)	191, 244, 594, 769, 842, 894, 1255, 1454, 1709
HpyF10VI	GCNNNNNNNGC	3 cut(s)	514, 1324, 1384
HpyF3I	CTNAG	5 cut(s)	676, 751, 846, 921, 1410
HpySE526I	ACGT	3 cut(s)	288, 1470, 1804
Hsp92I	GRCGYC	1 cut(s)	237
Hsp92II	CATG	8 cut(s)	621, 769, 898, 1222, 1228, 1244, 1545, 1585
HspAI	GCGC	5 cut(s)	11, 517, 1232, 1679, 1855
Kpn2I	TCCGGA	1 cut(s)	118
Ksp22I	TGATCA	1 cut(s)	1213
Kzo9I	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
LguI	GCTCTTC	3 cut(s)	507, 787, 1251
LmnI	GCTCC	3 cut(s)	1557, 1651, 1831
Lsp1109I	GCAGC	3 cut(s)	578, 854, 1693
LweI	GCATC	6 cut(s)	87, 178, 676, 859, 1314, 1441
MaeI	CTAG	1 cut(s)	1379
MaeII	ACGT	3 cut(s)	288, 1470, 1804
MaeIII	GTNAC	6 cut(s)	98, 553, 1000, 1190, 1405, 1754
MalI	GATC	9 cut(s)	167, 376, 927, 971, 1215, 1394, 1567, 1572, 1864
MbiI	CCGCTC	1 cut(s)	1557
MboI	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
MflI	RGATCY	2 cut(s)	925, 1570
MhlI	GDGCHC	1 cut(s)	1554
MluCI	AATT	9 cut(s)	426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
MlyI	GAGTC	3 cut(s)	41, 203, 755
MmeI	TCCRAC	1 cut(s)	628
MroI	TCCGGA	1 cut(s)	118
MroXI	GAANNNNTTC	2 cut(s)	128, 1080
MseI	TTAA	3 cut(s)	879, 1116, 1167
MslI	CAYNNNNRTG	8 cut(s)	527, 770, 1034, 1151, 1223, 1401, 1540, 1580
MspA1I	CMGCKG	1 cut(s)	484
MspCI	CTTAAG	1 cut(s)	878
MspI	CCGG	3 cut(s)	119, 378, 955
MspR9I	CCNGG	5 cut(s)	379, 955, 1184, 1713, 1810
Mva1269I	GAATGC	2 cut(s)	510, 1080
MvaI	CCWGG	3 cut(s)	1184, 1713, 1810
MwoI	GCNNNNNNNGC	3 cut(s)	514, 1324, 1384
NciI	CCSGG	2 cut(s)	379, 955
NdeII	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
NlaIII	CATG	8 cut(s)	621, 769, 898, 1222, 1228, 1244, 1545, 1585
NlaIV	GGNNCC	3 cut(s)	68, 927, 1833
NmuCI	GTSAC	3 cut(s)	553, 1190, 1754
NspI	RCATGY	2 cut(s)	1222, 1545
NspV	TTCGAA	1 cut(s)	1016
OliI	CACNNNNGTG	1 cut(s)	1151
PceI	AGGCCT	2 cut(s)	111, 1594
PciI	ACATGT	2 cut(s)	1218, 1541
PciSI	GCTCTTC	3 cut(s)	507, 787, 1251
PctI	GAATGC	2 cut(s)	510, 1080
PdmI	GAANNNNTTC	2 cut(s)	128, 1080
PfeI	GAWTC	4 cut(s)	628, 704, 788, 805
PfoI	TCCNGGA	3 cut(s)	377, 953, 1808
PkrI	GCNGC	3 cut(s)	593, 844, 1683
PleI	GAGTC	3 cut(s)	41, 202, 755
PpsI	GAGTC	3 cut(s)	41, 202, 755
PscI	ACATGT	2 cut(s)	1218, 1541
PshBI	ATTAAT	1 cut(s)	1167
Psp1406I	AACGTT	2 cut(s)	1470, 1804
Psp6I	CCWGG	3 cut(s)	1182, 1711, 1808
PspGI	CCWGG	3 cut(s)	1182, 1711, 1808
PspN4I	GGNNCC	3 cut(s)	68, 927, 1833
PspPI	GGNCC	3 cut(s)	296, 466, 621
PstI	CTGCAG	1 cut(s)	844
PstNI	CAGNNNCTG	1 cut(s)	591
PsuI	RGATCY	2 cut(s)	925, 1570
PvuII	CAGCTG	1 cut(s)	484
RsaI	GTAC	4 cut(s)	254, 1223, 1312, 1847
RsaNI	GTAC	4 cut(s)	253, 1222, 1311, 1846
RseI	CAYNNNNRTG	8 cut(s)	527, 770, 1034, 1151, 1223, 1401, 1540, 1580
SapI	GCTCTTC	3 cut(s)	507, 787, 1251
SaqAI	TTAA	3 cut(s)	879, 1116, 1167
SatI	GCNGC	3 cut(s)	592, 843, 1682
Sau3AI	GATC	9 cut(s)	165, 374, 925, 969, 1213, 1392, 1565, 1570, 1862
Sau96I	GGNCC	3 cut(s)	296, 466, 621
SchI	GAGTC	3 cut(s)	41, 203, 755
ScrFI	CCNGG	5 cut(s)	379, 955, 1184, 1713, 1810
SduI	GDGCHC	1 cut(s)	1554
SfaNI	GCATC	6 cut(s)	87, 178, 676, 859, 1314, 1441
SfcI	CTRYAG	4 cut(s)	840, 909, 1525, 1777
SfuI	TTCGAA	1 cut(s)	1016
SinI	GGWCC	2 cut(s)	466, 621
SmiMI	CAYNNNNRTG	8 cut(s)	527, 770, 1034, 1151, 1223, 1401, 1540, 1580
SmlI	CTYRAG	2 cut(s)	683, 878
SmoI	CTYRAG	2 cut(s)	683, 878
Sse9I	AATT	9 cut(s)	426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
SseBI	AGGCCT	2 cut(s)	111, 1594
SsiI	CCGC	4 cut(s)	29, 469, 1318, 1555
SspMI	CTAG	1 cut(s)	1379
StuI	AGGCCT	2 cut(s)	111, 1594
StyD4I	CCNGG	5 cut(s)	377, 953, 1182, 1711, 1808
StyI	CCWWGG	1 cut(s)	1795
TaaI	ACNGT	6 cut(s)	797, 994, 1150, 1315, 1754, 1825
TaiI	ACGT	3 cut(s)	291, 1473, 1807
TaqI	TCGA	4 cut(s)	373, 610, 1016, 1559
TasI	AATT	9 cut(s)	426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
TatI	WGTACW	2 cut(s)	1221, 1310
TfiI	GAWTC	4 cut(s)	628, 704, 788, 805
Tru1I	TTAA	3 cut(s)	879, 1116, 1167
Tru9I	TTAA	3 cut(s)	879, 1116, 1167
TscAI	CASTG	9 cut(s)	189, 480, 802, 997, 1041, 1153, 1320, 1757, 1830
TseFI	GTSAC	3 cut(s)	553, 1190, 1754
TseI	GCWGC	3 cut(s)	591, 842, 1681
Tsp45I	GTSAC	3 cut(s)	553, 1190, 1754
TspDTI	ATGAA	8 cut(s)	176, 377, 545, 732, 756, 954, 1241, 1496
TspRI	CASTG	9 cut(s)	189, 480, 802, 997, 1041, 1153, 1320, 1757, 1830
Vha464I	CTTAAG	1 cut(s)	878
VpaK11BI	GGWCC	2 cut(s)	466, 621
VspI	ATTAAT	1 cut(s)	1167
XapI	RAATTY	2 cut(s)	1018, 1444
XceI	RCATGY	2 cut(s)	1222, 1545
XmiI	GTMKAC	1 cut(s)	231
XmnI	GAANNNNTTC	2 cut(s)	128, 1080
XspI	CTAG	1 cut(s)	1379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.