HORMA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67370 |
| fragaria_vesca | FvH4_2g22740 FvH4_4g23791 FvH4_4g23791 FvH4_4g23800 |
| malus_domestica | MD13G1118700.v1.1 MD16G1118900.v1.1 |
| prunus_persica | Prupe.1G226200_v2.0.a1 Prupe.1G226200_v2.0.a1 |
| pyrus_communis | pycom13g10360 pycom16g10180 |
| rosa_chinensis | RchiOBHm_Chr4g0430291 RchiOBHm_Chr4g0430321 RchiOBHm_Chr4g0430341 |
| rosa_laevigata | RLG00000006983 RLG00000006985 RLG00000006987 |
| rosa_multiflora | Rmu_co8441339.1_g000001 Rmu_sc0000131.1_g000059 Rmu_sc0001089.1_g000027 Rmu_sc0002248.1_g000047 Rmu_sc0020995.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00372090 Rroxscaffold_5G00372110 |
| rosa_rugosa | Rorug04G0242500 Rorug04G0242600 |
| rosa_samantha | Rh4AG226000 Rh4AG298900 Rh4BG305500 Rh4CG240300 Rh4CG321000 Rh4CG321400 |
| rosa_wichuraiana | Rw4G025920 Rw4G025930 Rw4G025940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1544 |
| Acc36I | ACCTGC | 4 cut(s) | 78, 599, 1544, 1770 |
| AccB1I | GGYRCC | 1 cut(s) | 1541 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1507 |
| AccBSI | CCGCTC | 1 cut(s) | 517 |
| AccI | GTMKAC | 1 cut(s) | 231 |
| AccIII | TCCGGA | 1 cut(s) | 1021 |
| AciI | CCGC | 5 cut(s) | 29, 469, 517, 1315, 1539 |
| AclWI | GGATC | 6 cut(s) | 698, 828, 974, 1205, 1384, 1567 |
| AcsI | RAATTY | 2 cut(s) | 337, 1015 |
| AcuI | CTGAAG | 3 cut(s) | 568, 1065, 1443 |
| AcyI | GRCGYC | 1 cut(s) | 557 |
| AfaI | GTAC | 5 cut(s) | 254, 542, 1220, 1256, 1841 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 475, 516, 771, 958, 1507 |
| AflIII | ACRYGT | 1 cut(s) | 1527 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 193 |
| AjiI | CACGTC | 1 cut(s) | 1530 |
| AjnI | CCWGG | 2 cut(s) | 1705, 1802 |
| AleI | CACNNNNGTG | 1 cut(s) | 1148 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1818, 1850 |
| Alw26I | GTCTC | 2 cut(s) | 116, 201 |
| AlwI | GGATC | 6 cut(s) | 698, 828, 974, 1205, 1384, 1567 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 591, 975 |
| Aor13HI | TCCGGA | 1 cut(s) | 1021 |
| AoxI | GGCC | 1 cut(s) | 296 |
| ApeKI | GCWGC | 2 cut(s) | 873, 975 |
| ApoI | RAATTY | 2 cut(s) | 337, 1015 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1469, 1501 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 128, 1077, 1830 |
| AspLEI | GCGC | 3 cut(s) | 878, 1231, 1851 |
| AspS9I | GGNCC | 6 cut(s) | 296, 466, 519, 621, 1645, 1782 |
| AsuC2I | CCSGG | 3 cut(s) | 119, 952, 1523 |
| AsuHPI | GGTGA | 3 cut(s) | 857, 1162, 1760 |
| AvaII | GGWCC | 5 cut(s) | 466, 519, 621, 1645, 1782 |
| BaeGI | GKGCMC | 1 cut(s) | 1546 |
| BanI | GGYRCC | 1 cut(s) | 1541 |
| BanII | GRGCYC | 1 cut(s) | 1675 |
| BbvI | GCAGC | 2 cut(s) | 885, 962 |
| BccI | CCATC | 2 cut(s) | 211, 1160 |
| BceAI | ACGGC | 1 cut(s) | 1850 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 52, 86 |
| BciT130I | CCWGG | 2 cut(s) | 1707, 1804 |
| BcnI | CCSGG | 3 cut(s) | 119, 952, 1523 |
| BcoDI | GTCTC | 2 cut(s) | 116, 201 |
| BfaI | CTAG | 2 cut(s) | 1376, 1496 |
| BfmI | CTRYAG | 2 cut(s) | 420, 840 |
| BfoI | RGCGCY | 2 cut(s) | 1232, 1852 |
| BfuAI | ACCTGC | 4 cut(s) | 78, 599, 1544, 1770 |
| BglII | AGATCT | 2 cut(s) | 1564, 1586 |
| BisI | GCNGC | 2 cut(s) | 874, 976 |
| BlpI | GCTNAGC | 1 cut(s) | 1674 |
| BlsI | GCNGC | 2 cut(s) | 875, 977 |
| Bme1390I | CCNGG | 5 cut(s) | 119, 952, 1523, 1707, 1804 |
| Bme18I | GGWCC | 5 cut(s) | 466, 519, 621, 1645, 1782 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 193 |
| BmgBI | CACGTC | 1 cut(s) | 1530 |
| BmgT120I | GGNCC | 6 cut(s) | 296, 466, 519, 621, 1645, 1782 |
| BmiI | GGNNCC | 3 cut(s) | 68, 1543, 1827 |
| BmrFI | CCNGG | 5 cut(s) | 119, 952, 1523, 1707, 1804 |
| BmsI | GCATC | 5 cut(s) | 226, 495, 676, 1239, 1438 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1310, 1424 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 32, 64 |
| BpmI | CTGGAG | 2 cut(s) | 1113, 1820 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1674 |
| BpuMI | CCSGG | 3 cut(s) | 119, 952, 1523 |
| Bsa29I | ATCGAT | 1 cut(s) | 823 |
| BsaAI | YACGTR | 1 cut(s) | 1258 |
| BsaBI | GATNNNNATC | 1 cut(s) | 365 |
| BsaHI | GRCGYC | 1 cut(s) | 557 |
| BsaI | GGTCTC | 1 cut(s) | 116 |
| BsaJI | CCNNGG | 1 cut(s) | 860 |
| BsaWI | WCCGGW | 1 cut(s) | 1021 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1818, 1848 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 475, 516, 771, 958, 1507 |
| Bse118I | RCCGGY | 1 cut(s) | 1116 |
| Bse1I | ACTGG | 5 cut(s) | 480, 808, 968, 1096, 1837 |
| Bse3DI | GCAATG | 3 cut(s) | 239, 1458, 1717 |
| Bse8I | GATNNNNATC | 1 cut(s) | 365 |
| BseAI | TCCGGA | 1 cut(s) | 1021 |
| BseBI | CCWGG | 2 cut(s) | 1707, 1804 |
| BseCI | ATCGAT | 1 cut(s) | 823 |
| BseDI | CCNNGG | 1 cut(s) | 860 |
| BseGI | GGATG | 7 cut(s) | 222, 510, 721, 781, 947, 1171, 1462 |
| BseJI | GATNNNNATC | 1 cut(s) | 365 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 475, 516, 771, 958, 1507 |
| BseMI | GCAATG | 3 cut(s) | 239, 1458, 1717 |
| BseMII | CTCAG | 3 cut(s) | 609, 932, 1688 |
| BseNI | ACTGG | 5 cut(s) | 480, 808, 968, 1096, 1837 |
| BseRI | GAGGAG | 2 cut(s) | 460, 1630 |
| BseSI | GKGCMC | 1 cut(s) | 1546 |
| BseXI | GCAGC | 2 cut(s) | 885, 962 |
| BshFI | GGCC | 1 cut(s) | 298 |
| BshNI | GGYRCC | 1 cut(s) | 1541 |
| BshVI | ATCGAT | 1 cut(s) | 823 |
| BsiSI | CCGG | 5 cut(s) | 119, 952, 1022, 1117, 1522 |
| BslFI | GGGAC | 3 cut(s) | 1112, 1538, 1593 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 475, 516, 771, 958, 1507 |
| BsmAI | GTCTC | 2 cut(s) | 116, 201 |
| BsmFI | GGGAC | 3 cut(s) | 1112, 1538, 1593 |
| BsnI | GGCC | 1 cut(s) | 298 |
| Bso31I | GGTCTC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1546, 1675 |
| Bsp13I | TCCGGA | 1 cut(s) | 1021 |
| Bsp1407I | TGTACA | 1 cut(s) | 1218 |
| Bsp143I | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1674 |
| BspACI | CCGC | 5 cut(s) | 29, 469, 517, 1315, 1539 |
| BspANI | GGCC | 1 cut(s) | 298 |
| BspCNI | CTCAG | 3 cut(s) | 608, 931, 1687 |
| BspDI | ATCGAT | 1 cut(s) | 823 |
| BspEI | TCCGGA | 1 cut(s) | 1021 |
| BspLI | GGNNCC | 3 cut(s) | 68, 1543, 1827 |
| BspMAI | CTGCAG | 1 cut(s) | 424 |
| BspMI | ACCTGC | 4 cut(s) | 78, 599, 1544, 1770 |
| BspPI | GGATC | 6 cut(s) | 698, 828, 974, 1205, 1384, 1567 |
| BspQI | GCTCTTC | 2 cut(s) | 507, 1248 |
| BspT107I | GGYRCC | 1 cut(s) | 1541 |
| BspTNI | GGTCTC | 1 cut(s) | 116 |
| BsrBI | CCGCTC | 1 cut(s) | 517 |
| BsrDI | GCAATG | 3 cut(s) | 239, 1458, 1717 |
| BsrFI | RCCGGY | 1 cut(s) | 1116 |
| BsrGI | TGTACA | 1 cut(s) | 1218 |
| BsrI | ACTGG | 5 cut(s) | 480, 808, 968, 1096, 1837 |
| BssAI | RCCGGY | 1 cut(s) | 1116 |
| BssECI | CCNNGG | 1 cut(s) | 860 |
| BssMI | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| BssNAI | GTATAC | 1 cut(s) | 232 |
| BssNI | GRCGYC | 1 cut(s) | 557 |
| Bst1107I | GTATAC | 1 cut(s) | 232 |
| Bst2UI | CCWGG | 2 cut(s) | 1707, 1804 |
| Bst4CI | ACNGT | 8 cut(s) | 662, 797, 991, 1264, 1312, 1595, 1748, 1819 |
| Bst6I | CTCTTC | 3 cut(s) | 119, 507, 1248 |
| BstACI | GRCGYC | 1 cut(s) | 557 |
| BstAUI | TGTACA | 1 cut(s) | 1218 |
| BstBAI | YACGTR | 1 cut(s) | 1258 |
| BstC8I | GCNNGC | 1 cut(s) | 561 |
| BstDEI | CTNAG | 3 cut(s) | 595, 918, 1674 |
| BstDSI | CCRYGG | 1 cut(s) | 860 |
| BstF5I | GGATG | 7 cut(s) | 222, 510, 721, 781, 947, 1171, 1462 |
| BstH2I | RGCGCY | 2 cut(s) | 1232, 1852 |
| BstHHI | GCGC | 3 cut(s) | 878, 1231, 1851 |
| BstKTI | GATC | 9 cut(s) | 706, 823, 969, 1213, 1392, 1562, 1567, 1589, 1744 |
| BstMAI | GTCTC | 2 cut(s) | 116, 201 |
| BstMBI | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 49, 514, 1381 |
| BstNI | CCWGG | 2 cut(s) | 1707, 1804 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1310, 1424 |
| BstSCI | CCNGG | 5 cut(s) | 117, 950, 1521, 1705, 1802 |
| BstSFI | CTRYAG | 2 cut(s) | 420, 840 |
| BstSLI | GKGCMC | 1 cut(s) | 1546 |
| BstV1I | GCAGC | 2 cut(s) | 885, 962 |
| BstX2I | RGATCY | 2 cut(s) | 1564, 1586 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1556 |
| BstYI | RGATCY | 2 cut(s) | 1564, 1586 |
| BstZ17I | GTATAC | 1 cut(s) | 232 |
| Bsu15I | ATCGAT | 1 cut(s) | 823 |
| BsuRI | GGCC | 1 cut(s) | 298 |
| BsuTUI | ATCGAT | 1 cut(s) | 823 |
| BtgI | CCRYGG | 1 cut(s) | 860 |
| BtrI | CACGTC | 1 cut(s) | 1530 |
| BtsCI | GGATG | 7 cut(s) | 222, 510, 721, 781, 947, 1171, 1462 |
| BtsI | GCAGTG | 1 cut(s) | 417 |
| BtsIMutI | CAGTG | 7 cut(s) | 417, 473, 802, 933, 981, 987, 1038 |
| BveI | ACCTGC | 4 cut(s) | 78, 599, 1544, 1770 |
| Cac8I | GCNNGC | 1 cut(s) | 561 |
| CaiI | CAGNNNCTG | 2 cut(s) | 591, 975 |
| CfoI | GCGC | 3 cut(s) | 878, 1231, 1851 |
| Cfr10I | RCCGGY | 1 cut(s) | 1116 |
| Cfr13I | GGNCC | 6 cut(s) | 296, 466, 519, 621, 1645, 1782 |
| ClaI | ATCGAT | 1 cut(s) | 823 |
| CseI | GACGC | 3 cut(s) | 197, 565, 685 |
| Csp6I | GTAC | 5 cut(s) | 253, 541, 1219, 1255, 1840 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1440, 1475 |
| CviAII | CATG | 8 cut(s) | 766, 898, 1216, 1222, 1238, 1576, 1612, 1649 |
| CviQI | GTAC | 5 cut(s) | 253, 541, 1219, 1255, 1840 |
| DdeI | CTNAG | 3 cut(s) | 595, 918, 1674 |
| DpnI | GATC | 9 cut(s) | 705, 822, 968, 1212, 1391, 1561, 1566, 1588, 1743 |
| DpnII | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| DriI | GACNNNNNGTC | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 3 cut(s) | 119, 507, 1248 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 193 |
| EarI | CTCTTC | 3 cut(s) | 119, 507, 1248 |
| Eco24I | GRGCYC | 1 cut(s) | 1675 |
| Eco31I | GGTCTC | 1 cut(s) | 116 |
| Eco47I | GGWCC | 5 cut(s) | 466, 519, 621, 1645, 1782 |
| Eco57I | CTGAAG | 3 cut(s) | 568, 1065, 1443 |
| EcoRII | CCWGG | 2 cut(s) | 1705, 1802 |
| EcoT22I | ATGCAT | 1 cut(s) | 241 |
| EcoT38I | GRGCYC | 1 cut(s) | 1675 |
| FaeI | CATG | 8 cut(s) | 769, 901, 1219, 1225, 1241, 1579, 1615, 1652 |
| FaqI | GGGAC | 3 cut(s) | 1112, 1538, 1593 |
| FatI | CATG | 8 cut(s) | 765, 897, 1215, 1221, 1237, 1575, 1611, 1648 |
| FblI | GTMKAC | 1 cut(s) | 231 |
| Fnu4HI | GCNGC | 2 cut(s) | 874, 976 |
| FokI | GGATG | 7 cut(s) | 229, 517, 728, 788, 934, 1178, 1469 |
| FriOI | GRGCYC | 1 cut(s) | 1675 |
| Fsp4HI | GCNGC | 2 cut(s) | 874, 976 |
| FspBI | CTAG | 2 cut(s) | 1376, 1496 |
| GlaI | GCGC | 3 cut(s) | 877, 1230, 1850 |
| GluI | GCNGC | 2 cut(s) | 874, 976 |
| GsuI | CTGGAG | 2 cut(s) | 1113, 1820 |
| HaeII | RGCGCY | 2 cut(s) | 1232, 1852 |
| HaeIII | GGCC | 1 cut(s) | 298 |
| HapII | CCGG | 5 cut(s) | 119, 952, 1022, 1117, 1522 |
| HgaI | GACGC | 3 cut(s) | 197, 565, 685 |
| HhaI | GCGC | 3 cut(s) | 878, 1231, 1851 |
| Hin1I | GRCGYC | 1 cut(s) | 557 |
| Hin1II | CATG | 8 cut(s) | 769, 901, 1219, 1225, 1241, 1579, 1615, 1652 |
| Hin6I | GCGC | 3 cut(s) | 876, 1229, 1849 |
| HinP1I | GCGC | 3 cut(s) | 876, 1229, 1849 |
| HincII | GTYRAC | 1 cut(s) | 805 |
| HindII | GTYRAC | 1 cut(s) | 805 |
| HindIII | AAGCTT | 2 cut(s) | 1271, 1283 |
| HinfI | GANTC | 5 cut(s) | 47, 194, 761, 788, 923 |
| HpaI | GTTAAC | 1 cut(s) | 805 |
| HpaII | CCGG | 5 cut(s) | 119, 952, 1022, 1117, 1522 |
| HphI | GGTGA | 3 cut(s) | 857, 1162, 1760 |
| Hpy188III | TCNNGA | 9 cut(s) | 350, 497, 734, 920, 1012, 1022, 1429, 1496, 1689 |
| HpyAV | CCTTC | 8 cut(s) | 16, 287, 679, 1067, 1219, 1337, 1365, 1748 |
| HpyCH4III | ACNGT | 8 cut(s) | 662, 797, 991, 1264, 1312, 1595, 1748, 1819 |
| HpyCH4IV | ACGT | 4 cut(s) | 317, 1257, 1529, 1719 |
| HpyCH4V | TGCA | 7 cut(s) | 239, 244, 422, 769, 1252, 1451, 1652 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 49, 514, 1381 |
| HpyF3I | CTNAG | 3 cut(s) | 595, 918, 1674 |
| HpySE526I | ACGT | 4 cut(s) | 317, 1257, 1529, 1719 |
| Hsp92I | GRCGYC | 1 cut(s) | 557 |
| Hsp92II | CATG | 8 cut(s) | 769, 901, 1219, 1225, 1241, 1579, 1615, 1652 |
| HspAI | GCGC | 3 cut(s) | 876, 1229, 1849 |
| Kpn2I | TCCGGA | 1 cut(s) | 1021 |
| KspAI | GTTAAC | 1 cut(s) | 805 |
| Kzo9I | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| LguI | GCTCTTC | 2 cut(s) | 507, 1248 |
| LmnI | GCTCC | 2 cut(s) | 755, 841 |
| Lsp1109I | GCAGC | 2 cut(s) | 885, 962 |
| LweI | GCATC | 5 cut(s) | 226, 495, 676, 1239, 1438 |
| MaeI | CTAG | 2 cut(s) | 1376, 1496 |
| MaeII | ACGT | 4 cut(s) | 317, 1257, 1529, 1719 |
| MaeIII | GTNAC | 5 cut(s) | 98, 553, 810, 1258, 1681 |
| MalI | GATC | 9 cut(s) | 705, 822, 968, 1212, 1391, 1561, 1566, 1588, 1743 |
| MbiI | CCGCTC | 1 cut(s) | 517 |
| MboI | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| MfeI | CAATTG | 2 cut(s) | 288, 1182 |
| MflI | RGATCY | 2 cut(s) | 1564, 1586 |
| MhlI | GDGCHC | 2 cut(s) | 1546, 1675 |
| MluCI | AATT | 9 cut(s) | 288, 337, 426, 613, 1015, 1050, 1182, 1465, 1516 |
| MlyI | GAGTC | 2 cut(s) | 41, 203 |
| MmeI | TCCRAC | 1 cut(s) | 1685 |
| Mph1103I | ATGCAT | 1 cut(s) | 241 |
| MroI | TCCGGA | 1 cut(s) | 1021 |
| MroXI | GAANNNNTTC | 3 cut(s) | 128, 1077, 1830 |
| MseI | TTAA | 4 cut(s) | 804, 1068, 1113, 1206 |
| MslI | CAYNNNNRTG | 7 cut(s) | 406, 527, 1031, 1148, 1220, 1574, 1749 |
| MspI | CCGG | 5 cut(s) | 119, 952, 1022, 1117, 1522 |
| MspR9I | CCNGG | 5 cut(s) | 119, 952, 1523, 1707, 1804 |
| MunI | CAATTG | 2 cut(s) | 288, 1182 |
| MvaI | CCWGG | 2 cut(s) | 1707, 1804 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 49, 514, 1381 |
| NciI | CCSGG | 3 cut(s) | 119, 952, 1523 |
| NdeII | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| NlaIII | CATG | 8 cut(s) | 769, 901, 1219, 1225, 1241, 1579, 1615, 1652 |
| NlaIV | GGNNCC | 3 cut(s) | 68, 1543, 1827 |
| NmuCI | GTSAC | 4 cut(s) | 553, 810, 1258, 1681 |
| NsiI | ATGCAT | 1 cut(s) | 241 |
| OliI | CACNNNNGTG | 1 cut(s) | 1148 |
| PaqCI | CACCTGC | 1 cut(s) | 1544 |
| PciSI | GCTCTTC | 2 cut(s) | 507, 1248 |
| PdmI | GAANNNNTTC | 3 cut(s) | 128, 1077, 1830 |
| PfeI | GAWTC | 3 cut(s) | 761, 788, 923 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1507 |
| PfoI | TCCNGGA | 3 cut(s) | 117, 950, 1802 |
| PkrI | GCNGC | 2 cut(s) | 875, 977 |
| PleI | GAGTC | 2 cut(s) | 41, 202 |
| PpsI | GAGTC | 2 cut(s) | 41, 202 |
| Ppu21I | YACGTR | 1 cut(s) | 1258 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1310, 1424 |
| Psp6I | CCWGG | 2 cut(s) | 1705, 1802 |
| PspGI | CCWGG | 2 cut(s) | 1705, 1802 |
| PspN4I | GGNNCC | 3 cut(s) | 68, 1543, 1827 |
| PspPI | GGNCC | 6 cut(s) | 296, 466, 519, 621, 1645, 1782 |
| PstI | CTGCAG | 1 cut(s) | 424 |
| PstNI | CAGNNNCTG | 2 cut(s) | 591, 975 |
| PsuI | RGATCY | 2 cut(s) | 1564, 1586 |
| RsaI | GTAC | 5 cut(s) | 254, 542, 1220, 1256, 1841 |
| RsaNI | GTAC | 5 cut(s) | 253, 541, 1219, 1255, 1840 |
| RseI | CAYNNNNRTG | 7 cut(s) | 406, 527, 1031, 1148, 1220, 1574, 1749 |
| SapI | GCTCTTC | 2 cut(s) | 507, 1248 |
| SaqAI | TTAA | 4 cut(s) | 804, 1068, 1113, 1206 |
| SatI | GCNGC | 2 cut(s) | 874, 976 |
| Sau3AI | GATC | 9 cut(s) | 703, 820, 966, 1210, 1389, 1559, 1564, 1586, 1741 |
| Sau96I | GGNCC | 6 cut(s) | 296, 466, 519, 621, 1645, 1782 |
| SchI | GAGTC | 2 cut(s) | 41, 203 |
| ScrFI | CCNGG | 5 cut(s) | 119, 952, 1523, 1707, 1804 |
| SduI | GDGCHC | 2 cut(s) | 1546, 1675 |
| SfaNI | GCATC | 5 cut(s) | 226, 495, 676, 1239, 1438 |
| SfcI | CTRYAG | 2 cut(s) | 420, 840 |
| SinI | GGWCC | 5 cut(s) | 466, 519, 621, 1645, 1782 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 406, 527, 1031, 1148, 1220, 1574, 1749 |
| Sse9I | AATT | 9 cut(s) | 288, 337, 426, 613, 1015, 1050, 1182, 1465, 1516 |
| SsiI | CCGC | 5 cut(s) | 29, 469, 517, 1315, 1539 |
| SspI | AATATT | 1 cut(s) | 1444 |
| SspMI | CTAG | 2 cut(s) | 1376, 1496 |
| StyD4I | CCNGG | 5 cut(s) | 117, 950, 1521, 1705, 1802 |
| TaaI | ACNGT | 8 cut(s) | 662, 797, 991, 1264, 1312, 1595, 1748, 1819 |
| TaiI | ACGT | 4 cut(s) | 320, 1260, 1532, 1722 |
| TaqI | TCGA | 3 cut(s) | 359, 823, 1013 |
| TasI | AATT | 9 cut(s) | 288, 337, 426, 613, 1015, 1050, 1182, 1465, 1516 |
| TatI | WGTACW | 3 cut(s) | 540, 1218, 1839 |
| TfiI | GAWTC | 3 cut(s) | 761, 788, 923 |
| Tru1I | TTAA | 4 cut(s) | 804, 1068, 1113, 1206 |
| Tru9I | TTAA | 4 cut(s) | 804, 1068, 1113, 1206 |
| TscAI | CASTG | 7 cut(s) | 424, 480, 802, 933, 988, 994, 1038 |
| TseFI | GTSAC | 4 cut(s) | 553, 810, 1258, 1681 |
| TseI | GCWGC | 2 cut(s) | 873, 975 |
| Tsp45I | GTSAC | 4 cut(s) | 553, 810, 1258, 1681 |
| TspRI | CASTG | 7 cut(s) | 424, 480, 802, 933, 988, 994, 1038 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1507 |
| VpaK11BI | GGWCC | 5 cut(s) | 466, 519, 621, 1645, 1782 |
| XapI | RAATTY | 2 cut(s) | 337, 1015 |
| XbaI | TCTAGA | 1 cut(s) | 1495 |
| XmiI | GTMKAC | 1 cut(s) | 231 |
| XmnI | GAANNNNTTC | 3 cut(s) | 128, 1077, 1830 |
| XspI | CTAG | 2 cut(s) | 1376, 1496 |
| Zsp2I | ATGCAT | 1 cut(s) | 241 |