Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002200

Physical Location & Seq

Genomic Coordinates Forward (+)

26233943 .. 26239175

Gene Structure 5233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1242400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1221 bp

ATGAACATTCTATCTTCCGACTACTTCAAGGAGCTTTACCGGTTAAAGACGTACCATGAAGTCATTGATGAAATTTACAACCAAGTAGACCATGTCGAGCCGTGGATGACCGGGAATTGCCGTGGCCCGTCAACTGCCTTCTGTCTGCTGTACAAGTTCTTCACCATGAAGCTCACCGTTAAGCAAATGCACGGTCTTTTAAAGCACGAGGATTCGCCCTACATAAGAGCGGTGGGTTTCCTCTACTTGAGATATGCTGCAGACCCAAAGACTTTGTGGAATTGGGTTGAACCCTATATTAAAGATGATGAGGAATTTTCTCCTGGTTCCAATGGACGGATGACAACTATGGGTGTATATGTGCGCGATTTGCTGCTTGGGCAGTACTATTTTGATACCCTTTTCCCCCGCATCCCTGTTCCTGTTATGCGGCAGATTGTAGCTAATCTTGAGAAGATGAAACTCCCCACCAAACTATCTGGTATTACTGGAGAGGCTACCCGCCATGGATCTGATGACACAGCTCGTCGCCCACCTTCTGTGAAAGCTGCTCTTTCAGTTTCCTTTGGTCAACGTGCTCCACATCGTGCTTCAACAAGGGACTCCTCACCTGTTCGTCGCACCTTACCGCCACCACCTTATGATAAAGCCAGTAGTGATGATCAAAGGACCCGTCGCAGTCAGAGCCGTGAATATTCTGACAGAGAATATTCAGACAGGGACAGGGGAAGGGACCGGGATCGCAATCGGGATAGGGACAGTGATCGGGATCGAGAAAGATACAAGGAATGGGAGCGGGACCGAGACAGAGACAGAGACAGAGCAAGAGATAGAGTTAGGGATAAGGAAAGGGAGCGAGAGAGGGATAGAGAACGAAGTTCTGATTATGATGGAAGGTCCAAATATGGAGAGAGAGAGAGTCGAAGGGATCCATATGAGAGTAGCCGTGATGGCGGTAGGCATTCTCGTAGGAGTAGGAGTCGGAGCCGCAGTAGAAGCAGGAGTCAAAGTCGGAGTTTGCAAGCGGGCACTACACTTCATTCGAGCCCACAGAGAGATGTAAACAAGGATAGAACATCTGCATCTAGCAACCTGGCAAAACTTAGGGATCTTTATGGGGATGTAAGTGACCAAAAAGGCGATGCCAGCATGGATAGGATTCCCAGGGGAGATAATGGTGGTGAAGAGGTGATTAGACTTGGTGGTTCTCGTTGGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0010226 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050896 GO:0071011 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

PRP38 PRP38_assoc

Protein Analysis

407

Amino Acids

47.62

Weight (kDa)

9.77

Isoelectric Point (pI)

57.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRP38	PF03371	2 - 144	1.5e-48	PRP38 family
PRP38_assoc	PF12871	158 - 254	1.8e-10	Pre-mRNA-splicing factor 38-associated hydrophilic C-term

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370
fragaria_vesca	FvH4_4g06670
malus_domestica	MD01G1153700.v1.1 MD13G1237000.v1.1 MD16G1242400.v1.1
prunus_persica	Prupe.1G069400_v2.0.a1
pyrus_communis	pycom13g20990 pycom16g20310
rosa_chinensis	RchiOBHm_Chr4g0398571 RchiOBHm_Chr7g0213101
rosa_laevigata	RLG00000009343 RLG00000029418
rosa_multiflora	Rmu_sc0000990.1_g000015 Rmu_sc0005217.1_g000008 Rmu_sc0037096.1_g000001 Rmu_sc0042611.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343540
rosa_rugosa	Rorug04G0009400 Rorug04G0009400 Rorug04G0009400
rosa_samantha	Rh2CG542000 Rh2CG542400 Rh2DG581100 Rh2DG581300 Rh3CG285800 Rh4AG087400 Rh4BG084000 Rh4CG095600 Rh4DG078900 Rh5DG096400 Rh6BG299500
rosa_wichuraiana	Rw2G046220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	230, 796
AccI	GTMKAC	1 cut(s)	87
AccII	CGCG	1 cut(s)	366
AciI	CCGC	9 cut(s)	230, 409, 430, 502, 629, 796, 954, 988, 1025
AclWI	GGATC	6 cut(s)	517, 747, 777, 923, 936, 1116
AcsI	RAATTY	2 cut(s)	72, 314
AdeI	CACNNNGTG	1 cut(s)	587
AfaI	GTAC	3 cut(s)	53, 152, 386
AfiI	CCNNNNNNNGG	1 cut(s)	336
AgeI	ACCGGT	1 cut(s)	39
AgsI	TTSAA	3 cut(s)	28, 290, 594
AjnI	CCWGG	3 cut(s)	322, 1092, 1163
AluBI	AGCT	5 cut(s)	34, 172, 443, 524, 548
AluI	AGCT	5 cut(s)	34, 172, 443, 524, 548
Alw21I	GWGCWC	1 cut(s)	580
Alw26I	GTCTC	3 cut(s)	798, 804, 810
AlwI	GGATC	6 cut(s)	517, 747, 777, 923, 936, 1116
AoxI	GGCC	1 cut(s)	124
ApeKI	GCWGC	3 cut(s)	257, 373, 548
ApoI	RAATTY	2 cut(s)	72, 314
ArsI	GACNNNNNNTTYG	4 cut(s)	178, 210, 658, 690
AsiGI	ACCGGT	1 cut(s)	39
AspLEI	GCGC	1 cut(s)	366
AspS9I	GGNCC	5 cut(s)	125, 669, 733, 799, 897
AsuC2I	CCSGG	2 cut(s)	112, 737
AsuHPI	GGTGA	5 cut(s)	154, 166, 600, 1193, 1201
AvaII	GGWCC	4 cut(s)	669, 733, 799, 897
BaeGI	GKGCMC	1 cut(s)	1031
BamHI	GGATCC	1 cut(s)	928
BanII	GRGCYC	1 cut(s)	1049
BarI	GAAGNNNNNNTAC	2 cut(s)	143, 175
BauI	CACGAG	1 cut(s)	206
Bbv12I	GWGCWC	1 cut(s)	580
BbvI	GCAGC	3 cut(s)	244, 360, 535
BccI	CCATC	2 cut(s)	884, 944
BceAI	ACGGC	4 cut(s)	85, 105, 672, 930
BciT130I	CCWGG	3 cut(s)	324, 1094, 1165
BclI	TGATCA	1 cut(s)	661
BcnI	CCSGG	2 cut(s)	112, 737
BcoDI	GTCTC	3 cut(s)	798, 804, 810
BfaI	CTAG	1 cut(s)	1086
BfmI	CTRYAG	1 cut(s)	258
BglI	GCCNNNNNGGC	1 cut(s)	951
BisI	GCNGC	5 cut(s)	258, 374, 431, 549, 988
BlsI	GCNGC	5 cut(s)	259, 375, 432, 550, 989
BmcAI	AGTACT	1 cut(s)	386
Bme1390I	CCNGG	5 cut(s)	112, 324, 737, 1094, 1165
Bme18I	GGWCC	4 cut(s)	669, 733, 799, 897
BmgT120I	GGNCC	5 cut(s)	125, 669, 733, 799, 897
BmiI	GGNNCC	6 cut(s)	328, 671, 734, 800, 930, 986
BmrFI	CCNGG	5 cut(s)	112, 324, 737, 1094, 1165
BmsI	GCATC	3 cut(s)	420, 1091, 1132
BpmI	CTGGAG	1 cut(s)	510
BpuEI	CTTGAG	2 cut(s)	268, 470
BpuMI	CCSGG	2 cut(s)	112, 737
BsaBI	GATNNNNATC	2 cut(s)	744, 768
BsaJI	CCNNGG	5 cut(s)	101, 121, 505, 1163, 1164
BsaWI	WCCGGW	1 cut(s)	39
BsaXI	ACNNNNNCTCC	6 cut(s)	964, 976, 994, 994, 1006, 1024
Bsc4I	CCNNNNNNNGG	1 cut(s)	336
Bse118I	RCCGGY	1 cut(s)	39
Bse1I	ACTGG	2 cut(s)	493, 651
Bse8I	GATNNNNATC	2 cut(s)	744, 768
BseBI	CCWGG	3 cut(s)	324, 1094, 1165
BseDI	CCNNGG	5 cut(s)	101, 121, 505, 1163, 1164
BseGI	GGATG	4 cut(s)	111, 345, 411, 1126
BseJI	GATNNNNATC	2 cut(s)	744, 768
BseLI	CCNNNNNNNGG	1 cut(s)	336
BseNI	ACTGG	2 cut(s)	493, 651
BseRI	GAGGAG	1 cut(s)	595
BseSI	GKGCMC	1 cut(s)	1031
BseXI	GCAGC	3 cut(s)	244, 360, 535
Bsh1236I	CGCG	1 cut(s)	366
BshFI	GGCC	1 cut(s)	126
BshTI	ACCGGT	1 cut(s)	39
BsiHKAI	GWGCWC	1 cut(s)	580
BsiSI	CCGG	3 cut(s)	40, 111, 736
BslFI	GGGAC	5 cut(s)	614, 734, 746, 770, 812
BslI	CCNNNNNNNGG	1 cut(s)	336
BsmAI	GTCTC	3 cut(s)	798, 804, 810
BsmFI	GGGAC	5 cut(s)	614, 734, 746, 770, 812
BsmI	GAATGC	1 cut(s)	961
BsnI	GGCC	1 cut(s)	126
Bsp1286I	GDGCHC	3 cut(s)	580, 1031, 1049
Bsp1407I	TGTACA	1 cut(s)	150
Bsp143I	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
Bsp19I	CCATGG	1 cut(s)	505
BspACI	CCGC	9 cut(s)	230, 409, 430, 502, 629, 796, 954, 988, 1025
BspANI	GGCC	1 cut(s)	126
BspFNI	CGCG	1 cut(s)	366
BspLI	GGNNCC	6 cut(s)	328, 671, 734, 800, 930, 986
BspMAI	CTGCAG	1 cut(s)	262
BspPI	GGATC	6 cut(s)	517, 747, 777, 923, 936, 1116
BsrBI	CCGCTC	2 cut(s)	230, 796
BsrFI	RCCGGY	1 cut(s)	39
BsrGI	TGTACA	1 cut(s)	150
BsrI	ACTGG	2 cut(s)	493, 651
BssAI	RCCGGY	1 cut(s)	39
BssECI	CCNNGG	5 cut(s)	101, 121, 505, 1163, 1164
BssMI	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
BssSI	CACGAG	1 cut(s)	206
BssT1I	CCWWGG	1 cut(s)	505
Bst2BI	CACGAG	1 cut(s)	206
Bst2UI	CCWGG	3 cut(s)	324, 1094, 1165
Bst4CI	ACNGT	3 cut(s)	178, 194, 761
Bst6I	CTCTTC	1 cut(s)	1179
BstAUI	TGTACA	1 cut(s)	150
BstC8I	GCNNGC	3 cut(s)	1023, 1027, 1147
BstDEI	CTNAG	1 cut(s)	1103
BstDSI	CCRYGG	3 cut(s)	101, 121, 505
BstF5I	GGATG	4 cut(s)	111, 345, 411, 1126
BstFNI	CGCG	1 cut(s)	366
BstHHI	GCGC	1 cut(s)	366
BstKTI	GATC	7 cut(s)	512, 664, 742, 766, 772, 931, 1111
BstMAI	GTCTC	3 cut(s)	798, 804, 810
BstMBI	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
BstMWI	GCNNNNNNNGC	6 cut(s)	370, 379, 684, 951, 996, 1146
BstNI	CCWGG	3 cut(s)	324, 1094, 1165
BstSCI	CCNGG	5 cut(s)	110, 322, 735, 1092, 1163
BstSFI	CTRYAG	1 cut(s)	258
BstSLI	GKGCMC	1 cut(s)	1031
BstUI	CGCG	1 cut(s)	366
BstV1I	GCAGC	3 cut(s)	244, 360, 535
BstX2I	RGATCY	3 cut(s)	509, 928, 1108
BstYI	RGATCY	3 cut(s)	509, 928, 1108
BsuRI	GGCC	1 cut(s)	126
BtgI	CCRYGG	3 cut(s)	101, 121, 505
BtgZI	GCGATG	1 cut(s)	1155
BtsCI	GGATG	4 cut(s)	111, 345, 411, 1126
BtsIMutI	CAGTG	1 cut(s)	766
Cac8I	GCNNGC	3 cut(s)	1023, 1027, 1147
CfoI	GCGC	1 cut(s)	366
Cfr10I	RCCGGY	1 cut(s)	39
Cfr13I	GGNCC	5 cut(s)	125, 669, 733, 799, 897
Csp6I	GTAC	3 cut(s)	52, 151, 385
CspAI	ACCGGT	1 cut(s)	39
CviAII	CATG	5 cut(s)	56, 92, 166, 506, 1150
CviQI	GTAC	3 cut(s)	52, 151, 385
DdeI	CTNAG	1 cut(s)	1103
DpnI	GATC	7 cut(s)	511, 663, 741, 765, 771, 930, 1110
DpnII	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
DraI	TTTAAA	1 cut(s)	201
DraIII	CACNNNGTG	1 cut(s)	587
Eam1104I	CTCTTC	1 cut(s)	1179
EarI	CTCTTC	1 cut(s)	1179
Eco130I	CCWWGG	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	1049
Eco47I	GGWCC	4 cut(s)	669, 733, 799, 897
EcoO109I	RGGNCCY	1 cut(s)	669
EcoRII	CCWGG	3 cut(s)	322, 1092, 1163
EcoT14I	CCWWGG	1 cut(s)	505
EcoT38I	GRGCYC	1 cut(s)	1049
ErhI	CCWWGG	1 cut(s)	505
FaeI	CATG	5 cut(s)	59, 95, 169, 509, 1153
FalI	AAGNNNNNCTT	2 cut(s)	537, 569
FaqI	GGGAC	5 cut(s)	614, 734, 746, 770, 812
FatI	CATG	5 cut(s)	55, 91, 165, 505, 1149
FauI	CCCGC	4 cut(s)	416, 509, 789, 1018
FauNDI	CATATG	1 cut(s)	934
FbaI	TGATCA	1 cut(s)	661
FblI	GTMKAC	1 cut(s)	87
Fnu4HI	GCNGC	5 cut(s)	258, 374, 431, 549, 988
FokI	GGATG	4 cut(s)	118, 352, 398, 1133
FriOI	GRGCYC	1 cut(s)	1049
Fsp4HI	GCNGC	5 cut(s)	258, 374, 431, 549, 988
FspBI	CTAG	1 cut(s)	1086
GlaI	GCGC	1 cut(s)	365
GluI	GCNGC	5 cut(s)	258, 374, 431, 549, 988
GsuI	CTGGAG	1 cut(s)	510
HaeIII	GGCC	1 cut(s)	126
HapII	CCGG	3 cut(s)	40, 111, 736
HhaI	GCGC	1 cut(s)	366
Hin1II	CATG	5 cut(s)	59, 95, 169, 509, 1153
Hin6I	GCGC	1 cut(s)	364
HinP1I	GCGC	1 cut(s)	364
HincII	GTYRAC	2 cut(s)	132, 572
HindII	GTYRAC	2 cut(s)	132, 572
HinfI	GANTC	6 cut(s)	212, 602, 919, 979, 1003, 1159
HpaII	CCGG	3 cut(s)	40, 111, 736
HphI	GGTGA	5 cut(s)	154, 166, 600, 1193, 1201
Hpy166II	GTNNAC	4 cut(s)	88, 132, 572, 1063
Hpy188I	TCNGA	8 cut(s)	19, 514, 684, 700, 715, 883, 984, 1014
Hpy188III	TCNNGA	4 cut(s)	449, 749, 767, 773
Hpy8I	GTNNAC	4 cut(s)	88, 132, 572, 1063
Hpy99I	CGWCG	3 cut(s)	531, 621, 678
HpyAV	CCTTC	5 cut(s)	148, 546, 723, 888, 918
HpyCH4III	ACNGT	3 cut(s)	178, 194, 761
HpyCH4IV	ACGT	2 cut(s)	50, 574
HpyCH4V	TGCA	4 cut(s)	190, 260, 1021, 1082
HpyF10VI	GCNNNNNNNGC	6 cut(s)	370, 379, 684, 951, 996, 1146
HpyF3I	CTNAG	1 cut(s)	1103
HpySE526I	ACGT	2 cut(s)	50, 574
Hsp92II	CATG	5 cut(s)	59, 95, 169, 509, 1153
HspAI	GCGC	1 cut(s)	364
Ksp22I	TGATCA	1 cut(s)	661
Kzo9I	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
LmnI	GCTCC	5 cut(s)	31, 583, 793, 853, 984
Lsp1109I	GCAGC	3 cut(s)	244, 360, 535
LweI	GCATC	3 cut(s)	420, 1091, 1132
MaeI	CTAG	1 cut(s)	1086
MaeII	ACGT	2 cut(s)	50, 574
MaeIII	GTNAC	1 cut(s)	1127
MalI	GATC	7 cut(s)	511, 663, 741, 765, 771, 930, 1110
MbiI	CCGCTC	2 cut(s)	230, 796
MboI	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
MboII	GAAGA	4 cut(s)	6, 151, 466, 1196
MflI	RGATCY	3 cut(s)	509, 928, 1108
MhlI	GDGCHC	3 cut(s)	580, 1031, 1049
MluCI	AATT	4 cut(s)	72, 115, 280, 314
MlyI	GAGTC	4 cut(s)	596, 928, 988, 1012
MmeI	TCCRAC	4 cut(s)	42, 962, 992, 1193
MnlI	CCTC	7 cut(s)	202, 251, 304, 487, 616, 855, 1180
MseI	TTAA	4 cut(s)	44, 180, 200, 300
MspI	CCGG	3 cut(s)	40, 111, 736
MspR9I	CCNGG	5 cut(s)	112, 324, 737, 1094, 1165
Mva1269I	GAATGC	1 cut(s)	961
MvaI	CCWGG	3 cut(s)	324, 1094, 1165
MvnI	CGCG	1 cut(s)	366
MwoI	GCNNNNNNNGC	6 cut(s)	370, 379, 684, 951, 996, 1146
NciI	CCSGG	2 cut(s)	112, 737
NcoI	CCATGG	1 cut(s)	505
NdeI	CATATG	1 cut(s)	934
NdeII	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
NlaIII	CATG	5 cut(s)	59, 95, 169, 509, 1153
NlaIV	GGNNCC	6 cut(s)	328, 671, 734, 800, 930, 986
NmuCI	GTSAC	1 cut(s)	1127
PasI	CCCWGGG	1 cut(s)	1164
PctI	GAATGC	1 cut(s)	961
PfeI	GAWTC	2 cut(s)	212, 1159
PflFI	GACNNNGTC	1 cut(s)	92
PinAI	ACCGGT	1 cut(s)	39
PkrI	GCNGC	5 cut(s)	259, 375, 432, 550, 989
PleI	GAGTC	4 cut(s)	596, 927, 987, 1011
PpsI	GAGTC	4 cut(s)	596, 927, 987, 1011
PpuMI	RGGWCCY	1 cut(s)	669
Psp5II	RGGWCCY	1 cut(s)	669
Psp6I	CCWGG	3 cut(s)	322, 1092, 1163
PspGI	CCWGG	3 cut(s)	322, 1092, 1163
PspN4I	GGNNCC	6 cut(s)	328, 671, 734, 800, 930, 986
PspPI	GGNCC	5 cut(s)	125, 669, 733, 799, 897
PspPPI	RGGWCCY	1 cut(s)	669
PstI	CTGCAG	1 cut(s)	262
PsuI	RGATCY	3 cut(s)	509, 928, 1108
PsyI	GACNNNGTC	1 cut(s)	92
RsaI	GTAC	3 cut(s)	53, 152, 386
RsaNI	GTAC	3 cut(s)	52, 151, 385
SaqAI	TTAA	4 cut(s)	44, 180, 200, 300
SatI	GCNGC	5 cut(s)	258, 374, 431, 549, 988
Sau3AI	GATC	7 cut(s)	509, 661, 739, 763, 769, 928, 1108
Sau96I	GGNCC	5 cut(s)	125, 669, 733, 799, 897
ScaI	AGTACT	1 cut(s)	386
SchI	GAGTC	4 cut(s)	596, 928, 988, 1012
ScrFI	CCNGG	5 cut(s)	112, 324, 737, 1094, 1165
SduI	GDGCHC	3 cut(s)	580, 1031, 1049
SfaNI	GCATC	3 cut(s)	420, 1091, 1132
SfcI	CTRYAG	1 cut(s)	258
SinI	GGWCC	4 cut(s)	669, 733, 799, 897
SmlI	CTYRAG	2 cut(s)	247, 449
SmoI	CTYRAG	2 cut(s)	247, 449
Sse9I	AATT	4 cut(s)	72, 115, 280, 314
SsiI	CCGC	9 cut(s)	230, 409, 430, 502, 629, 796, 954, 988, 1025
SspI	AATATT	2 cut(s)	695, 710
SspMI	CTAG	1 cut(s)	1086
StyD4I	CCNGG	5 cut(s)	110, 322, 735, 1092, 1163
StyI	CCWWGG	1 cut(s)	505
TaaI	ACNGT	3 cut(s)	178, 194, 761
TaiI	ACGT	2 cut(s)	53, 577
TaqI	TCGA	4 cut(s)	96, 772, 922, 1043
TaqII	GACCGA	1 cut(s)	816
TasI	AATT	4 cut(s)	72, 115, 280, 314
TatI	WGTACW	2 cut(s)	150, 384
TauI	GCSGC	2 cut(s)	433, 990
TfiI	GAWTC	2 cut(s)	212, 1159
Tru1I	TTAA	4 cut(s)	44, 180, 200, 300
Tru9I	TTAA	4 cut(s)	44, 180, 200, 300
TscAI	CASTG	1 cut(s)	766
TseFI	GTSAC	1 cut(s)	1127
TseI	GCWGC	3 cut(s)	257, 373, 548
Tsp45I	GTSAC	1 cut(s)	1127
TspDTI	ATGAA	6 cut(s)	17, 72, 84, 182, 473, 1028
TspGWI	ACGGA	1 cut(s)	352
TspRI	CASTG	1 cut(s)	766
Tth111I	GACNNNGTC	1 cut(s)	92
VpaK11BI	GGWCC	4 cut(s)	669, 733, 799, 897
XapI	RAATTY	2 cut(s)	72, 314
XcmI	CCANNNNNNNNNTGG	1 cut(s)	273
XmiI	GTMKAC	1 cut(s)	87
XspI	CTAG	1 cut(s)	1086
ZrmI	AGTACT	1 cut(s)	386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.