Phosphoribulokinase / Uridine kinase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 AT5G37370 |
| fragaria_vesca | FvH4_4g06670 |
| malus_domestica | MD01G1153700.v1.1 MD13G1237000.v1.1 MD16G1242400.v1.1 |
| prunus_persica | Prupe.1G069400_v2.0.a1 |
| pyrus_communis | pycom13g20990 pycom16g20310 |
| rosa_chinensis | RchiOBHm_Chr4g0398571 RchiOBHm_Chr7g0213101 |
| rosa_laevigata | RLG00000009343 RLG00000029418 |
| rosa_multiflora | Rmu_sc0000990.1_g000015 Rmu_sc0005217.1_g000008 Rmu_sc0037096.1_g000001 Rmu_sc0042611.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00343540 |
| rosa_rugosa | Rorug04G0009400 Rorug04G0009400 Rorug04G0009400 |
| rosa_samantha | Rh2CG542000 Rh2CG542400 Rh2DG581100 Rh2DG581300 Rh3CG285800 Rh4AG087400 Rh4BG084000 Rh4CG095600 Rh4DG078900 Rh5DG096400 Rh6BG299500 |
| rosa_wichuraiana | Rw2G046220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 70, 217 |
| AcsI | RAATTY | 1 cut(s) | 83 |
| AgsI | TTSAA | 2 cut(s) | 48, 173 |
| AjnI | CCWGG | 1 cut(s) | 91 |
| AluBI | AGCT | 1 cut(s) | 176 |
| AluI | AGCT | 1 cut(s) | 176 |
| ApeKI | GCWGC | 1 cut(s) | 188 |
| ApoI | RAATTY | 1 cut(s) | 83 |
| AspS9I | GGNCC | 2 cut(s) | 67, 206 |
| AvaII | GGWCC | 2 cut(s) | 67, 206 |
| BbsI | GAAGAC | 1 cut(s) | 161 |
| BbvI | GCAGC | 1 cut(s) | 175 |
| BccI | CCATC | 1 cut(s) | 11 |
| BciT130I | CCWGG | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 190 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| Bme18I | GGWCC | 2 cut(s) | 67, 206 |
| BmgT120I | GGNCC | 2 cut(s) | 67, 206 |
| BmiI | GGNNCC | 2 cut(s) | 97, 207 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BpiI | GAAGAC | 1 cut(s) | 161 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 71, 103 |
| BpmI | CTGGAG | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| BseBI | CCWGG | 1 cut(s) | 93 |
| BseXI | GCAGC | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 37 |
| BspACI | CCGC | 2 cut(s) | 70, 217 |
| BspLI | GGNNCC | 2 cut(s) | 97, 207 |
| BssMI | GATC | 1 cut(s) | 37 |
| Bst2UI | CCWGG | 1 cut(s) | 93 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstKTI | GATC | 1 cut(s) | 40 |
| BstMBI | GATC | 1 cut(s) | 37 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| BstNI | CCWGG | 1 cut(s) | 93 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 1 cut(s) | 175 |
| BstV2I | GAAGAC | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 2 cut(s) | 67, 206 |
| CseI | GACGC | 1 cut(s) | 150 |
| CviJI | RGCY | 2 cut(s) | 176, 188 |
| CviKI_1 | RGCY | 2 cut(s) | 176, 188 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| DpnI | GATC | 1 cut(s) | 39 |
| DpnII | GATC | 1 cut(s) | 37 |
| Eco47I | GGWCC | 2 cut(s) | 67, 206 |
| EcoO109I | RGGNCCY | 1 cut(s) | 206 |
| EcoRII | CCWGG | 1 cut(s) | 91 |
| FaiI | YATR | 4 cut(s) | 62, 119, 127, 129 |
| FauI | CCCGC | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 1 cut(s) | 189 |
| Fsp4HI | GCNGC | 1 cut(s) | 189 |
| GluI | GCNGC | 1 cut(s) | 189 |
| GsuI | CTGGAG | 1 cut(s) | 75 |
| HgaI | GACGC | 1 cut(s) | 150 |
| Hpy188I | TCNGA | 1 cut(s) | 180 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 77 |
| Hpy99I | CGWCG | 1 cut(s) | 166 |
| HpyAV | CCTTC | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 1 cut(s) | 191 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| Kzo9I | GATC | 1 cut(s) | 37 |
| LmnI | GCTCC | 1 cut(s) | 181 |
| LpnPI | CCDG | 5 cut(s) | 26, 50, 78, 105, 170 |
| Lsp1109I | GCAGC | 1 cut(s) | 175 |
| MalI | GATC | 1 cut(s) | 39 |
| MboI | GATC | 1 cut(s) | 37 |
| MboII | GAAGA | 1 cut(s) | 166 |
| MfeI | CAATTG | 1 cut(s) | 198 |
| MluCI | AATT | 3 cut(s) | 83, 168, 198 |
| MnlI | CCTC | 1 cut(s) | 207 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MunI | CAATTG | 1 cut(s) | 198 |
| MvaI | CCWGG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 139, 148 |
| NdeII | GATC | 1 cut(s) | 37 |
| NlaIV | GGNNCC | 2 cut(s) | 97, 207 |
| PflFI | GACNNNGTC | 1 cut(s) | 160 |
| PkrI | GCNGC | 1 cut(s) | 190 |
| PpuMI | RGGWCCY | 1 cut(s) | 206 |
| Psp5II | RGGWCCY | 1 cut(s) | 206 |
| Psp6I | CCWGG | 1 cut(s) | 91 |
| PspGI | CCWGG | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 2 cut(s) | 97, 207 |
| PspPI | GGNCC | 2 cut(s) | 67, 206 |
| PspPPI | RGGWCCY | 1 cut(s) | 206 |
| PsyI | GACNNNGTC | 1 cut(s) | 160 |
| SatI | GCNGC | 1 cut(s) | 189 |
| Sau3AI | GATC | 1 cut(s) | 37 |
| Sau96I | GGNCC | 2 cut(s) | 67, 206 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SetI | ASST | 2 cut(s) | 97, 178 |
| SgeI | CNNG | 9 cut(s) | 26, 53, 77, 89, 104, 105, 146, 158, 197 |
| SinI | GGWCC | 2 cut(s) | 67, 206 |
| SmlI | CTYRAG | 1 cut(s) | 77 |
| SmoI | CTYRAG | 1 cut(s) | 77 |
| Sse9I | AATT | 3 cut(s) | 83, 168, 198 |
| SsiI | CCGC | 2 cut(s) | 70, 217 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| TaqI | TCGA | 1 cut(s) | 164 |
| TasI | AATT | 3 cut(s) | 83, 168, 198 |
| TseI | GCWGC | 1 cut(s) | 188 |
| TspDTI | ATGAA | 1 cut(s) | 42 |
| Tth111I | GACNNNGTC | 1 cut(s) | 160 |
| VpaK11BI | GGWCC | 2 cut(s) | 67, 206 |
| XapI | RAATTY | 1 cut(s) | 83 |