Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Reverse (-)

11823357 .. 11827522

Gene Structure 4166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1132600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGAATTCTTGCATTCCTGAGGGGAACTTTGAGGCTGATCTCCCCTTGACCAACCAAAAGAAATCAATGGGGCCAGACCATGAACTAGTCGAGCTCTTGTGGAGAAATGGGCAAGTAGTTTTGAACAGCCAAACGCATCGAAAACCAAGTCTTAATCCGAATGATCAACCGAGACAAGTTCAGAAACATGATCAGCAATCAATAAGGTCTGGTGGGTTGTATGGGAATTCAGGTAGTCTGATTCAAGATGATGACACAGTTTCGCTTATCCACTACCCGCTTGAGGATTCTTTCGACAAAGAGTTTTGCTCCCATTTTTTCTCTGAATTGCATTCCTGTGGTCCAATTGAGCTTGACAAGCCAATCAAACAGTTTGAGGGAGACAAGTTTGATGCTTCTGACACCGGGCGTCTTGTTTCCAATTCACCGCAGCCTAATGTTAAGTCCTCTGCTGGTGTGGAATACCCTGCAAATCCAATGCCTCCTCCAAGATACCACTACATTAATTCAACTGATCAGCCGAACCAAAATAGAGGCTTGGGGAAAATAGTTAATTTTGCGCAATTTGCAACCCCGGGAAAGCTTTCTGCAGGATCTTCCAGAGGACAGTTAGGAGGGAAAGAGGCCGGAGATTTAGCTCAAGCGGAGGTTAGAGAGTGTTCTGTGATGACGGTTGGTTCGAGTTATGCTGGTAGCAACCAAGTTCTAAATGAACTTGATGTGAGCAGGGCTTCAAGCAATTGTGATGGAACCACTGGTTTATCGGCTGGACATTTCTATGACAATGTTCATAAGATAATGCCTCAGAGCGAGACGGGGAAAACAGATACGCTTGATCAAACGCTTACTTCGTCTTCTGGTGGTTCTGGAAGTAGTTTTGGCAGAGGAGGAAAGCAGTCTAATGTTGTCAACAGCAACAAGAGAAAGGTTAGAGATGCAGAGGACTCGGAGTGCCAAAGTGAGGCTGCTGAACTTGAGTCAGCTTCAGCTGCAGGAAGTAAGTCAGCGCATCGATCAGGATCGACCAGGAGGAGTCGTGCTGCTGAAGTCCATAACCTCTCAGAAAGGAGACGGAGAGATCGGATTAACGAGAAAATGAGAGCATTGCAAGAGCTTATACCTCATTCTAACAAGACAGATAAAGCATCAATGTTAGATGAGGCAATTGAATACTTGAAGTCACTTCAGATGCAACTTCAGGTAATTTGGATGGGAAGCGGGATGGCACCAATGATGTTTCCGGGAGTGCAGCACTATATTTCCCAAATGGGAATGGGACCGCCGGCCTTGCCTGCTATGCACAATCCGGTGCGTCTACCTAGGCACCCGCTCGTTGATCAGTGTATGAATGTGGCTCCAGCACCAAACCAGACTGTAATGTGCCAACCACCGGTCTTGAATCCCGTTGATTACCACAACCAGGTGCAAAATCCCTCTTTTCAGGAGCAATACGCGCGTCTCATGAACTTCCATCACATGCAGACTATGTCTCAGCCGATGAATATGTTCAGATTTGGCTCCCGACCTGTACAACAGAATAATCAGATGATGGCAGCAAATGGTGTCAGCAGTGGACCTTTCGGGGTAGGAGCTGCAACTAATGACCCTTTAAGTGGAAGAATGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

543

Amino Acids

59.3

Weight (kDa)

6.53

Isoelectric Point (pI)

54.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	349 - 396	6.4e-14	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	355 - 401	1.4e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	561
AccB1I	GGYRCC	2 cut(s)	1225, 1323
AccBSI	CCGCTC	1 cut(s)	1330
AccI	GTMKAC	1 cut(s)	1315
AccII	CGCG	2 cut(s)	1454, 1456
AciI	CCGC	6 cut(s)	278, 428, 644, 1218, 1280, 1328
AclWI	GGATC	2 cut(s)	601, 1027
AcsI	RAATTY	2 cut(s)	4, 226
AcuI	CTGAAG	4 cut(s)	969, 1065, 1169, 1181
AcyI	GRCGYC	1 cut(s)	409
AfaI	GTAC	1 cut(s)	1530
AfiI	CCNNNNNNNGG	5 cut(s)	283, 961, 1390, 1420, 1613
AgeI	ACCGGT	1 cut(s)	1390
AgsI	TTSAA	7 cut(s)	124, 245, 510, 735, 1169, 1177, 1399
AhlI	ACTAGT	1 cut(s)	85
AjnI	CCWGG	2 cut(s)	1025, 1419
AluBI	AGCT	8 cut(s)	94, 352, 583, 638, 983, 989, 1114, 1592
AluI	AGCT	8 cut(s)	94, 352, 583, 638, 983, 989, 1114, 1592
Alw21I	GWGCWC	1 cut(s)	96
Alw26I	GTCTC	6 cut(s)	166, 375, 806, 1063, 1463, 1494
AlwI	GGATC	2 cut(s)	601, 1027
Ama87I	CYCGRG	1 cut(s)	574
AoxI	GGCC	3 cut(s)	71, 624, 1284
ApeKI	GCWGC	7 cut(s)	430, 965, 989, 1040, 1249, 1553, 1592
ApoI	RAATTY	2 cut(s)	4, 226
ArsI	GACNNNNNNTTYG	4 cut(s)	133, 165, 661, 693
AseI	ATTAAT	1 cut(s)	504
AsiGI	ACCGGT	1 cut(s)	1390
Asp700I	GAANNNNTTC	2 cut(s)	583, 1505
AspA2I	CCTAGG	1 cut(s)	1319
AspLEI	GCGC	3 cut(s)	562, 1009, 1456
AspS9I	GGNCC	4 cut(s)	71, 341, 1277, 1574
AsuC2I	CCSGG	4 cut(s)	406, 575, 576, 1242
AsuHPI	GGTGA	1 cut(s)	417
AvaI	CYCGRG	1 cut(s)	574
AvaII	GGWCC	3 cut(s)	341, 1277, 1574
AvrII	CCTAGG	1 cut(s)	1319
AxyI	CCTNAGG	1 cut(s)	18
BanI	GGYRCC	2 cut(s)	1225, 1323
BanII	GRGCYC	1 cut(s)	96
BbsI	GAAGAC	1 cut(s)	846
Bbv12I	GWGCWC	1 cut(s)	96
BbvI	GCAGC	7 cut(s)	442, 952, 976, 1027, 1261, 1565, 1579
BccI	CCATC	5 cut(s)	740, 1204, 1216, 1479, 1543
BcgI	CGANNNNNNTGC	2 cut(s)	927, 961
BciT130I	CCWGG	2 cut(s)	1027, 1421
BclI	TGATCA	5 cut(s)	163, 190, 514, 835, 1336
BcnI	CCSGG	4 cut(s)	406, 575, 576, 1242
BcoDI	GTCTC	6 cut(s)	166, 375, 806, 1063, 1463, 1494
BcuI	ACTAGT	1 cut(s)	85
BfaI	CTAG	2 cut(s)	86, 1320
BfmI	CTRYAG	2 cut(s)	588, 990
BisI	GCNGC	7 cut(s)	431, 966, 990, 1041, 1250, 1554, 1593
BlnI	CCTAGG	1 cut(s)	1319
BlsI	GCNGC	7 cut(s)	432, 967, 991, 1042, 1251, 1555, 1594
Bme1390I	CCNGG	6 cut(s)	406, 575, 576, 1027, 1242, 1421
Bme18I	GGWCC	3 cut(s)	341, 1277, 1574
BmeT110I	CYCGRG	1 cut(s)	574
BmgT120I	GGNCC	4 cut(s)	71, 341, 1277, 1574
BmiI	GGNNCC	7 cut(s)	72, 751, 1227, 1278, 1325, 1356, 1519
BmrFI	CCNGG	6 cut(s)	406, 575, 576, 1027, 1242, 1421
BmsI	GCATC	6 cut(s)	145, 382, 925, 1018, 1154, 1179
BpiI	GAAGAC	1 cut(s)	846
BplI	GAGNNNNNCTC	2 cut(s)	293, 325
BpmI	CTGGAG	1 cut(s)	1341
BpuEI	CTTGAG	3 cut(s)	302, 624, 995
BpuMI	CCSGG	4 cut(s)	406, 575, 576, 1242
Bsa29I	ATCGAT	1 cut(s)	1012
BsaBI	GATNNNNATC	1 cut(s)	1018
BsaHI	GRCGYC	1 cut(s)	409
BsaJI	CCNNGG	3 cut(s)	573, 574, 1319
BsaWI	WCCGGW	2 cut(s)	1306, 1390
BsaXI	ACNNNNNCTCC	2 cut(s)	1021, 1051
Bsc4I	CCNNNNNNNGG	5 cut(s)	283, 961, 1390, 1420, 1613
Bse118I	RCCGGY	2 cut(s)	1282, 1390
Bse1I	ACTGG	1 cut(s)	760
Bse21I	CCTNAGG	1 cut(s)	18
Bse3DI	GCAATG	1 cut(s)	1103
Bse8I	GATNNNNATC	1 cut(s)	1018
BseBI	CCWGG	2 cut(s)	1027, 1421
BseCI	ATCGAT	1 cut(s)	1012
BseDI	CCNNGG	3 cut(s)	573, 574, 1319
BseGI	GGATG	2 cut(s)	1215, 1227
BseJI	GATNNNNATC	1 cut(s)	1018
BseLI	CCNNNNNNNGG	5 cut(s)	283, 961, 1390, 1420, 1613
BseMI	GCAATG	1 cut(s)	1103
BseMII	CTCAG	4 cut(s)	9, 818, 1074, 1505
BseNI	ACTGG	1 cut(s)	760
BseRI	GAGGAG	3 cut(s)	474, 900, 1045
BseXI	GCAGC	7 cut(s)	442, 952, 976, 1027, 1261, 1565, 1579
BsgI	GTGCAG	1 cut(s)	1268
Bsh1236I	CGCG	2 cut(s)	1454, 1456
BshFI	GGCC	3 cut(s)	73, 626, 1286
BshNI	GGYRCC	2 cut(s)	1225, 1323
BshTI	ACCGGT	1 cut(s)	1390
BshVI	ATCGAT	1 cut(s)	1012
BsiHKAI	GWGCWC	1 cut(s)	96
BsiHKCI	CYCGRG	1 cut(s)	574
BsiSI	CCGG	7 cut(s)	405, 575, 627, 1241, 1283, 1307, 1391
BslFI	GGGAC	1 cut(s)	1290
BslI	CCNNNNNNNGG	5 cut(s)	283, 961, 1390, 1420, 1613
BsmAI	GTCTC	6 cut(s)	166, 375, 806, 1063, 1463, 1494
BsmBI	CGTCTC	3 cut(s)	806, 1063, 1463
BsmFI	GGGAC	1 cut(s)	1290
BsmI	GAATGC	2 cut(s)	12, 331
BsnI	GGCC	3 cut(s)	73, 626, 1286
BsoBI	CYCGRG	1 cut(s)	574
Bsp1286I	GDGCHC	1 cut(s)	96
Bsp1407I	TGTACA	1 cut(s)	1528
BspACI	CCGC	6 cut(s)	278, 428, 644, 1218, 1280, 1328
BspANI	GGCC	3 cut(s)	73, 626, 1286
BspCNI	CTCAG	4 cut(s)	10, 817, 1073, 1504
BspDI	ATCGAT	1 cut(s)	1012
BspFNI	CGCG	2 cut(s)	1454, 1456
BspHI	TCATGA	1 cut(s)	1461
BspLI	GGNNCC	7 cut(s)	72, 751, 1227, 1278, 1325, 1356, 1519
BspMAI	CTGCAG	2 cut(s)	592, 994
BspPI	GGATC	2 cut(s)	601, 1027
BspT107I	GGYRCC	2 cut(s)	1225, 1323
BsrBI	CCGCTC	1 cut(s)	1330
BsrDI	GCAATG	1 cut(s)	1103
BsrFI	RCCGGY	2 cut(s)	1282, 1390
BsrGI	TGTACA	1 cut(s)	1528
BsrI	ACTGG	1 cut(s)	760
BssAI	RCCGGY	2 cut(s)	1282, 1390
BssECI	CCNNGG	3 cut(s)	573, 574, 1319
BssNI	GRCGYC	1 cut(s)	409
BssT1I	CCWWGG	1 cut(s)	1319
Bst2UI	CCWGG	2 cut(s)	1027, 1421
Bst4CI	ACNGT	5 cut(s)	259, 372, 609, 673, 1375
BstACI	GRCGYC	1 cut(s)	409
BstAUI	TGTACA	1 cut(s)	1528
BstC8I	GCNNGC	2 cut(s)	1284, 1293
BstDEI	CTNAG	4 cut(s)	18, 804, 1060, 1491
BstF5I	GGATG	2 cut(s)	1215, 1227
BstFNI	CGCG	2 cut(s)	1454, 1456
BstHHI	GCGC	3 cut(s)	562, 1009, 1456
BstMAI	GTCTC	6 cut(s)	166, 375, 806, 1063, 1463, 1494
BstMWI	GCNNNNNNNGC	7 cut(s)	358, 566, 989, 1288, 1292, 1297, 1453
BstNI	CCWGG	2 cut(s)	1027, 1421
BstNSI	RCATGY	1 cut(s)	1480
BstSCI	CCNGG	6 cut(s)	404, 573, 574, 1025, 1240, 1419
BstSFI	CTRYAG	2 cut(s)	588, 990
BstUI	CGCG	2 cut(s)	1454, 1456
BstV1I	GCAGC	7 cut(s)	442, 952, 976, 1027, 1261, 1565, 1579
BstV2I	GAAGAC	1 cut(s)	846
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
Bsu15I	ATCGAT	1 cut(s)	1012
Bsu36I	CCTNAGG	1 cut(s)	18
BsuRI	GGCC	3 cut(s)	73, 626, 1286
BsuTUI	ATCGAT	1 cut(s)	1012
BtsCI	GGATG	2 cut(s)	1215, 1227
BtsI	GCAGTG	1 cut(s)	1576
BtsIMutI	CAGTG	3 cut(s)	753, 1346, 1576
Cac8I	GCNNGC	2 cut(s)	1284, 1293
CciI	TCATGA	1 cut(s)	1461
CfoI	GCGC	3 cut(s)	562, 1009, 1456
Cfr10I	RCCGGY	2 cut(s)	1282, 1390
Cfr13I	GGNCC	4 cut(s)	71, 341, 1277, 1574
Cfr9I	CCCGGG	1 cut(s)	574
ClaI	ATCGAT	1 cut(s)	1012
CseI	GACGC	3 cut(s)	398, 1301, 1445
CsiI	ACCWGGT	1 cut(s)	1419
Csp6I	GTAC	1 cut(s)	1529
CspAI	ACCGGT	1 cut(s)	1390
CspCI	CAANNNNNGTGG	2 cut(s)	1377, 1412
CviAII	CATG	4 cut(s)	80, 188, 1462, 1477
CviQI	GTAC	1 cut(s)	1529
DdeI	CTNAG	4 cut(s)	18, 804, 1060, 1491
Ecl136II	GAGCTC	1 cut(s)	94
Eco130I	CCWWGG	1 cut(s)	1319
Eco24I	GRGCYC	1 cut(s)	96
Eco47I	GGWCC	3 cut(s)	341, 1277, 1574
Eco53kI	GAGCTC	1 cut(s)	94
Eco57I	CTGAAG	4 cut(s)	969, 1065, 1169, 1181
Eco81I	CCTNAGG	1 cut(s)	18
Eco88I	CYCGRG	1 cut(s)	574
EcoICRI	GAGCTC	1 cut(s)	94
EcoRI	GAATTC	2 cut(s)	4, 226
EcoRII	CCWGG	2 cut(s)	1025, 1419
EcoT14I	CCWWGG	1 cut(s)	1319
EcoT38I	GRGCYC	1 cut(s)	96
ErhI	CCWWGG	1 cut(s)	1319
Esp3I	CGTCTC	3 cut(s)	806, 1063, 1463
FaeI	CATG	4 cut(s)	83, 191, 1465, 1480
FaqI	GGGAC	1 cut(s)	1290
FatI	CATG	4 cut(s)	79, 187, 1461, 1476
FauI	CCCGC	3 cut(s)	285, 1211, 1335
FbaI	TGATCA	5 cut(s)	163, 190, 514, 835, 1336
FblI	GTMKAC	1 cut(s)	1315
Fnu4HI	GCNGC	7 cut(s)	431, 966, 990, 1041, 1250, 1554, 1593
FokI	GGATG	2 cut(s)	1222, 1234
FriOI	GRGCYC	1 cut(s)	96
Fsp4HI	GCNGC	7 cut(s)	431, 966, 990, 1041, 1250, 1554, 1593
FspBI	CTAG	2 cut(s)	86, 1320
FspI	TGCGCA	1 cut(s)	561
GlaI	GCGC	3 cut(s)	561, 1008, 1455
GluI	GCNGC	7 cut(s)	431, 966, 990, 1041, 1250, 1554, 1593
GsuI	CTGGAG	1 cut(s)	1341
HaeIII	GGCC	3 cut(s)	73, 626, 1286
HapII	CCGG	7 cut(s)	405, 575, 627, 1241, 1283, 1307, 1391
HgaI	GACGC	3 cut(s)	398, 1301, 1445
HhaI	GCGC	3 cut(s)	562, 1009, 1456
Hin1I	GRCGYC	1 cut(s)	409
Hin1II	CATG	4 cut(s)	83, 191, 1465, 1480
Hin6I	GCGC	3 cut(s)	560, 1007, 1454
HinP1I	GCGC	3 cut(s)	560, 1007, 1454
HincII	GTYRAC	1 cut(s)	910
HindII	GTYRAC	1 cut(s)	910
HindIII	AAGCTT	1 cut(s)	581
HinfI	GANTC	6 cut(s)	241, 287, 944, 977, 1033, 1399
HpaII	CCGG	7 cut(s)	405, 575, 627, 1241, 1283, 1307, 1391
HphI	GGTGA	1 cut(s)	417
Hpy166II	GTNNAC	3 cut(s)	910, 1316, 1574
Hpy188III	TCNNGA	9 cut(s)	17, 245, 600, 867, 1017, 1396, 1442, 1462, 1521
Hpy8I	GTNNAC	3 cut(s)	910, 1316, 1574
HpyCH4III	ACNGT	5 cut(s)	259, 372, 609, 673, 1375
HpyF10VI	GCNNNNNNNGC	7 cut(s)	358, 566, 989, 1288, 1292, 1297, 1453
HpyF3I	CTNAG	4 cut(s)	18, 804, 1060, 1491
Hsp92I	GRCGYC	1 cut(s)	409
Hsp92II	CATG	4 cut(s)	83, 191, 1465, 1480
HspAI	GCGC	3 cut(s)	560, 1007, 1454
KroI	GCCGGC	1 cut(s)	1282
KroNI	GCCGGC	1 cut(s)	1284
Ksp22I	TGATCA	5 cut(s)	163, 190, 514, 835, 1336
LmnI	GCTCC	5 cut(s)	314, 1360, 1444, 1523, 1589
Lsp1109I	GCAGC	7 cut(s)	442, 952, 976, 1027, 1261, 1565, 1579
LweI	GCATC	6 cut(s)	145, 382, 925, 1018, 1154, 1179
MabI	ACCWGGT	1 cut(s)	1419
MaeI	CTAG	2 cut(s)	86, 1320
MaeIII	GTNAC	1 cut(s)	1179
MbiI	CCGCTC	1 cut(s)	1330
MboII	GAAGA	3 cut(s)	588, 846, 1629
MfeI	CAATTG	3 cut(s)	345, 739, 1164
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	1 cut(s)	96
MlyI	GAGTC	3 cut(s)	938, 986, 1042
MroNI	GCCGGC	1 cut(s)	1282
MroXI	GAANNNNTTC	2 cut(s)	583, 1505
MseI	TTAA	7 cut(s)	153, 441, 504, 552, 1086, 1610, 1627
MslI	CAYNNNNRTG	2 cut(s)	336, 777
MspA1I	CMGCKG	1 cut(s)	989
MspI	CCGG	7 cut(s)	405, 575, 627, 1241, 1283, 1307, 1391
MspR9I	CCNGG	6 cut(s)	406, 575, 576, 1027, 1242, 1421
MunI	CAATTG	3 cut(s)	345, 739, 1164
Mva1269I	GAATGC	2 cut(s)	12, 331
MvaI	CCWGG	2 cut(s)	1027, 1421
MvnI	CGCG	2 cut(s)	1454, 1456
MwoI	GCNNNNNNNGC	7 cut(s)	358, 566, 989, 1288, 1292, 1297, 1453
NaeI	GCCGGC	1 cut(s)	1284
NciI	CCSGG	4 cut(s)	406, 575, 576, 1242
NgoMIV	GCCGGC	1 cut(s)	1282
NlaIII	CATG	4 cut(s)	83, 191, 1465, 1480
NlaIV	GGNNCC	7 cut(s)	72, 751, 1227, 1278, 1325, 1356, 1519
NmuCI	GTSAC	1 cut(s)	1179
NsbI	TGCGCA	1 cut(s)	561
NspI	RCATGY	1 cut(s)	1480
PagI	TCATGA	1 cut(s)	1461
PcsI	WCGNNNNNNNCGW	2 cut(s)	677, 848
PctI	GAATGC	2 cut(s)	12, 331
PdiI	GCCGGC	1 cut(s)	1284
PdmI	GAANNNNTTC	2 cut(s)	583, 1505
PfeI	GAWTC	3 cut(s)	241, 287, 1399
PflFI	GACNNNGTC	1 cut(s)	1486
PfoI	TCCNGGA	1 cut(s)	1240
PinAI	ACCGGT	1 cut(s)	1390
PkrI	GCNGC	7 cut(s)	432, 967, 991, 1042, 1251, 1555, 1594
PleI	GAGTC	3 cut(s)	938, 985, 1041
PpsI	GAGTC	3 cut(s)	938, 985, 1041
PshBI	ATTAAT	1 cut(s)	504
Psp124BI	GAGCTC	1 cut(s)	96
Psp6I	CCWGG	2 cut(s)	1025, 1419
PspGI	CCWGG	2 cut(s)	1025, 1419
PspN4I	GGNNCC	7 cut(s)	72, 751, 1227, 1278, 1325, 1356, 1519
PspPI	GGNCC	4 cut(s)	71, 341, 1277, 1574
PstI	CTGCAG	2 cut(s)	592, 994
PsuI	RGATCY	1 cut(s)	593
PsyI	GACNNNGTC	1 cut(s)	1486
PvuII	CAGCTG	1 cut(s)	989
RsaI	GTAC	1 cut(s)	1530
RsaNI	GTAC	1 cut(s)	1529
RseI	CAYNNNNRTG	2 cut(s)	336, 777
SacI	GAGCTC	1 cut(s)	96
SaqAI	TTAA	7 cut(s)	153, 441, 504, 552, 1086, 1610, 1627
SatI	GCNGC	7 cut(s)	431, 966, 990, 1041, 1250, 1554, 1593
Sau96I	GGNCC	4 cut(s)	71, 341, 1277, 1574
SchI	GAGTC	3 cut(s)	938, 986, 1042
ScrFI	CCNGG	6 cut(s)	406, 575, 576, 1027, 1242, 1421
SduI	GDGCHC	1 cut(s)	96
SexAI	ACCWGGT	1 cut(s)	1419
SfaNI	GCATC	6 cut(s)	145, 382, 925, 1018, 1154, 1179
SfcI	CTRYAG	2 cut(s)	588, 990
SinI	GGWCC	3 cut(s)	341, 1277, 1574
SmaI	CCCGGG	1 cut(s)	576
SmiMI	CAYNNNNRTG	2 cut(s)	336, 777
SmlI	CTYRAG	3 cut(s)	281, 639, 974
SmoI	CTYRAG	3 cut(s)	281, 639, 974
SpeI	ACTAGT	1 cut(s)	85
SsiI	CCGC	6 cut(s)	278, 428, 644, 1218, 1280, 1328
SspMI	CTAG	2 cut(s)	86, 1320
SstI	GAGCTC	1 cut(s)	96
StyD4I	CCNGG	6 cut(s)	404, 573, 574, 1025, 1240, 1419
StyI	CCWWGG	1 cut(s)	1319
TaaI	ACNGT	5 cut(s)	259, 372, 609, 673, 1375
TaqI	TCGA	6 cut(s)	90, 139, 294, 680, 1012, 1022
TatI	WGTACW	1 cut(s)	1528
TfiI	GAWTC	3 cut(s)	241, 287, 1399
Tru1I	TTAA	7 cut(s)	153, 441, 504, 552, 1086, 1610, 1627
Tru9I	TTAA	7 cut(s)	153, 441, 504, 552, 1086, 1610, 1627
TscAI	CASTG	3 cut(s)	760, 1346, 1576
TseFI	GTSAC	1 cut(s)	1179
TseI	GCWGC	7 cut(s)	430, 965, 989, 1040, 1249, 1553, 1592
Tsp45I	GTSAC	1 cut(s)	1179
TspDTI	ATGAA	7 cut(s)	17, 96, 726, 779, 1361, 1478, 1514
TspGWI	ACGGA	1 cut(s)	1087
TspMI	CCCGGG	1 cut(s)	574
TspRI	CASTG	3 cut(s)	760, 1346, 1576
Tth111I	GACNNNGTC	1 cut(s)	1486
VpaK11BI	GGWCC	3 cut(s)	341, 1277, 1574
VspI	ATTAAT	1 cut(s)	504
XapI	RAATTY	2 cut(s)	4, 226
XceI	RCATGY	1 cut(s)	1480
XmaI	CCCGGG	1 cut(s)	574
XmaJI	CCTAGG	1 cut(s)	1319
XmiI	GTMKAC	1 cut(s)	1315
XmnI	GAANNNNTTC	2 cut(s)	583, 1505
XspI	CTAG	2 cut(s)	86, 1320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.