transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060 |
| fragaria_vesca | FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 |
| malus_domestica | MD09G1146000.v1.1 MD17G1132600.v1.1 |
| prunus_persica | Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 |
| pyrus_communis | pycom09g06630 pycom17g12610 |
| rosa_chinensis | RchiOBHm_Chr2g0152511 |
| rosa_laevigata | RLG00000020642 |
| rosa_multiflora | Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00095640 |
| rosa_rugosa | Rorug02G0434000 Rorug02G0434100 Rorug02G0434200 |
| rosa_samantha | Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600 |
| rosa_wichuraiana | Rw2G040760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1228 |
| AccII | CGCG | 1 cut(s) | 1483 |
| AciI | CCGC | 5 cut(s) | 194, 653, 904, 1221, 1461 |
| AclWI | GGATC | 6 cut(s) | 185, 262, 335, 610, 1030, 1094 |
| AcsI | RAATTY | 2 cut(s) | 4, 25 |
| AcuI | CTGAAG | 3 cut(s) | 1068, 1172, 1184 |
| AfaI | GTAC | 1 cut(s) | 1618 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 589, 590, 970, 1417, 1607 |
| AgeI | ACCGGT | 1 cut(s) | 1417 |
| AhlI | ACTAGT | 1 cut(s) | 85 |
| AjnI | CCWGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 841, 873 |
| AluBI | AGCT | 4 cut(s) | 94, 992, 1117, 1622 |
| AluI | AGCT | 4 cut(s) | 94, 992, 1117, 1622 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 1119 |
| Alw26I | GTCTC | 3 cut(s) | 1066, 1188, 1521 |
| AlwI | GGATC | 6 cut(s) | 185, 262, 335, 610, 1030, 1094 |
| AoxI | GGCC | 2 cut(s) | 71, 168 |
| ApeKI | GCWGC | 4 cut(s) | 974, 992, 1043, 1252 |
| ApoI | RAATTY | 2 cut(s) | 4, 25 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 11, 43, 133, 165, 670, 702 |
| AseI | ATTAAT | 1 cut(s) | 1374 |
| AsiGI | ACCGGT | 1 cut(s) | 1417 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1532 |
| AspLEI | GCGC | 1 cut(s) | 1483 |
| AspS9I | GGNCC | 4 cut(s) | 71, 779, 1304, 1598 |
| AsuHPI | GGTGA | 1 cut(s) | 605 |
| AvaII | GGWCC | 3 cut(s) | 779, 1304, 1598 |
| BanI | GGYRCC | 1 cut(s) | 1228 |
| BanII | GRGCYC | 2 cut(s) | 96, 1119 |
| BbsI | GAAGAC | 2 cut(s) | 258, 855 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 1119 |
| BbvCI | CCTCAGC | 1 cut(s) | 948 |
| BbvI | GCAGC | 4 cut(s) | 961, 979, 1030, 1264 |
| BccI | CCATC | 5 cut(s) | 426, 749, 1207, 1219, 1506 |
| BceAI | ACGGC | 1 cut(s) | 1023 |
| BciT130I | CCWGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| BclI | TGATCA | 1 cut(s) | 1363 |
| BcoDI | GTCTC | 3 cut(s) | 1066, 1188, 1521 |
| BcuI | ACTAGT | 1 cut(s) | 85 |
| BfaI | CTAG | 4 cut(s) | 86, 539, 842, 1358 |
| BfmI | CTRYAG | 1 cut(s) | 993 |
| BisI | GCNGC | 4 cut(s) | 975, 993, 1044, 1253 |
| BlsI | GCNGC | 4 cut(s) | 976, 994, 1045, 1254 |
| Bme1390I | CCNGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| Bme18I | GGWCC | 3 cut(s) | 779, 1304, 1598 |
| BmgT120I | GGNCC | 4 cut(s) | 71, 779, 1304, 1598 |
| BmiI | GGNNCC | 8 cut(s) | 72, 262, 781, 1037, 1230, 1305, 1383, 1546 |
| BmrFI | CCNGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| BmsI | GCATC | 8 cut(s) | 145, 798, 934, 1157, 1182, 1326, 1440, 1596 |
| BpiI | GAAGAC | 2 cut(s) | 258, 855 |
| BpmI | CTGGAG | 1 cut(s) | 1368 |
| Bpu10I | CCTNAGC | 1 cut(s) | 948 |
| BpuEI | CTTGAG | 3 cut(s) | 214, 228, 1004 |
| BsaJI | CCNNGG | 2 cut(s) | 66, 583 |
| BsaWI | WCCGGW | 1 cut(s) | 1417 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 944, 974, 1024, 1054 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 589, 590, 970, 1417, 1607 |
| Bse118I | RCCGGY | 1 cut(s) | 1417 |
| Bse1I | ACTGG | 4 cut(s) | 26, 769, 1430, 1588 |
| Bse3DI | GCAATG | 1 cut(s) | 1106 |
| BseBI | CCWGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| BseDI | CCNNGG | 2 cut(s) | 66, 583 |
| BseGI | GGATG | 3 cut(s) | 1025, 1218, 1230 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 589, 590, 970, 1417, 1607 |
| BseMI | GCAATG | 1 cut(s) | 1106 |
| BseMII | CTCAG | 6 cut(s) | 513, 662, 827, 939, 1077, 1532 |
| BseNI | ACTGG | 4 cut(s) | 26, 769, 1430, 1588 |
| BseRI | GAGGAG | 5 cut(s) | 483, 909, 965, 1048, 1626 |
| BseXI | GCAGC | 4 cut(s) | 961, 979, 1030, 1264 |
| BseYI | CCCAGC | 1 cut(s) | 1548 |
| Bsh1236I | CGCG | 1 cut(s) | 1483 |
| BshFI | GGCC | 2 cut(s) | 73, 170 |
| BshNI | GGYRCC | 1 cut(s) | 1228 |
| BshTI | ACCGGT | 1 cut(s) | 1417 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 1119 |
| BsiSI | CCGG | 1 cut(s) | 1418 |
| BslFI | GGGAC | 5 cut(s) | 439, 772, 1249, 1317, 1337 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 589, 590, 970, 1417, 1607 |
| BsmAI | GTCTC | 3 cut(s) | 1066, 1188, 1521 |
| BsmBI | CGTCTC | 1 cut(s) | 1066 |
| BsmFI | GGGAC | 5 cut(s) | 439, 772, 1249, 1317, 1337 |
| BsmI | GAATGC | 1 cut(s) | 12 |
| BsnI | GGCC | 2 cut(s) | 73, 170 |
| Bsp1286I | GDGCHC | 2 cut(s) | 96, 1119 |
| Bsp143I | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| Bsp19I | CCATGG | 1 cut(s) | 66 |
| BspACI | CCGC | 5 cut(s) | 194, 653, 904, 1221, 1461 |
| BspANI | GGCC | 2 cut(s) | 73, 170 |
| BspCNI | CTCAG | 6 cut(s) | 514, 661, 826, 940, 1076, 1531 |
| BspFNI | CGCG | 1 cut(s) | 1483 |
| BspLI | GGNNCC | 8 cut(s) | 72, 262, 781, 1037, 1230, 1305, 1383, 1546 |
| BspMAI | CTGCAG | 1 cut(s) | 997 |
| BspPI | GGATC | 6 cut(s) | 185, 262, 335, 610, 1030, 1094 |
| BspT107I | GGYRCC | 1 cut(s) | 1228 |
| BsrDI | GCAATG | 1 cut(s) | 1106 |
| BsrFI | RCCGGY | 1 cut(s) | 1417 |
| BsrI | ACTGG | 4 cut(s) | 26, 769, 1430, 1588 |
| BssAI | RCCGGY | 1 cut(s) | 1417 |
| BssECI | CCNNGG | 2 cut(s) | 66, 583 |
| BssMI | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| BssT1I | CCWWGG | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| Bst4CI | ACNGT | 4 cut(s) | 147, 682, 1017, 1595 |
| Bst6I | CTCTTC | 1 cut(s) | 1191 |
| BstC8I | GCNNGC | 1 cut(s) | 1250 |
| BstDEI | CTNAG | 7 cut(s) | 393, 522, 648, 813, 948, 1063, 1518 |
| BstDSI | CCRYGG | 1 cut(s) | 66 |
| BstF5I | GGATG | 3 cut(s) | 1025, 1218, 1230 |
| BstFNI | CGCG | 1 cut(s) | 1483 |
| BstHHI | GCGC | 1 cut(s) | 1483 |
| BstKTI | GATC | 9 cut(s) | 40, 193, 270, 343, 605, 1025, 1084, 1089, 1366 |
| BstMAI | GTCTC | 3 cut(s) | 1066, 1188, 1521 |
| BstMBI | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1324, 1480 |
| BstNI | CCWGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| BstNSI | RCATGY | 1 cut(s) | 1252 |
| BstSCI | CCNGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| BstSFI | CTRYAG | 1 cut(s) | 993 |
| BstUI | CGCG | 1 cut(s) | 1483 |
| BstV1I | GCAGC | 4 cut(s) | 961, 979, 1030, 1264 |
| BstV2I | GAAGAC | 2 cut(s) | 258, 855 |
| BstX2I | RGATCY | 2 cut(s) | 190, 602 |
| BstYI | RGATCY | 2 cut(s) | 190, 602 |
| BsuRI | GGCC | 2 cut(s) | 73, 170 |
| BtgI | CCRYGG | 1 cut(s) | 66 |
| BtsCI | GGATG | 3 cut(s) | 1025, 1218, 1230 |
| BtsI | GCAGTG | 1 cut(s) | 429 |
| BtsIMutI | CAGTG | 3 cut(s) | 429, 1373, 1600 |
| Cac8I | GCNNGC | 1 cut(s) | 1250 |
| CfoI | GCGC | 1 cut(s) | 1483 |
| Cfr10I | RCCGGY | 1 cut(s) | 1417 |
| Cfr13I | GGNCC | 4 cut(s) | 71, 779, 1304, 1598 |
| CseI | GACGC | 1 cut(s) | 1472 |
| Csp6I | GTAC | 1 cut(s) | 1617 |
| CspAI | ACCGGT | 1 cut(s) | 1417 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1296, 1331 |
| CviAII | CATG | 3 cut(s) | 67, 80, 1249 |
| CviQI | GTAC | 1 cut(s) | 1617 |
| DdeI | CTNAG | 7 cut(s) | 393, 522, 648, 813, 948, 1063, 1518 |
| DpnI | GATC | 9 cut(s) | 39, 192, 269, 342, 604, 1024, 1083, 1088, 1365 |
| DpnII | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| Eam1104I | CTCTTC | 1 cut(s) | 1191 |
| EarI | CTCTTC | 1 cut(s) | 1191 |
| EciI | GGCGGA | 1 cut(s) | 668 |
| Ecl136II | GAGCTC | 2 cut(s) | 94, 1117 |
| Eco130I | CCWWGG | 1 cut(s) | 66 |
| Eco24I | GRGCYC | 2 cut(s) | 96, 1119 |
| Eco32I | GATATC | 2 cut(s) | 473, 503 |
| Eco47I | GGWCC | 3 cut(s) | 779, 1304, 1598 |
| Eco53kI | GAGCTC | 2 cut(s) | 94, 1117 |
| Eco57I | CTGAAG | 3 cut(s) | 1068, 1172, 1184 |
| EcoICRI | GAGCTC | 2 cut(s) | 94, 1117 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoRII | CCWGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| EcoRV | GATATC | 2 cut(s) | 473, 503 |
| EcoT14I | CCWWGG | 1 cut(s) | 66 |
| EcoT22I | ATGCAT | 1 cut(s) | 1341 |
| EcoT38I | GRGCYC | 2 cut(s) | 96, 1119 |
| ErhI | CCWWGG | 1 cut(s) | 66 |
| Esp3I | CGTCTC | 1 cut(s) | 1066 |
| FaeI | CATG | 3 cut(s) | 70, 83, 1252 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1634 |
| FaqI | GGGAC | 5 cut(s) | 439, 772, 1249, 1317, 1337 |
| FatI | CATG | 3 cut(s) | 66, 79, 1248 |
| FauI | CCCGC | 2 cut(s) | 1214, 1468 |
| FauNDI | CATATG | 1 cut(s) | 1503 |
| FbaI | TGATCA | 1 cut(s) | 1363 |
| Fnu4HI | GCNGC | 4 cut(s) | 975, 993, 1044, 1253 |
| FokI | GGATG | 3 cut(s) | 1012, 1225, 1237 |
| FriOI | GRGCYC | 2 cut(s) | 96, 1119 |
| Fsp4HI | GCNGC | 4 cut(s) | 975, 993, 1044, 1253 |
| FspBI | CTAG | 4 cut(s) | 86, 539, 842, 1358 |
| GlaI | GCGC | 1 cut(s) | 1482 |
| GluI | GCNGC | 4 cut(s) | 975, 993, 1044, 1253 |
| GsaI | CCCAGC | 1 cut(s) | 1552 |
| GsuI | CTGGAG | 1 cut(s) | 1368 |
| HaeIII | GGCC | 2 cut(s) | 73, 170 |
| HapII | CCGG | 1 cut(s) | 1418 |
| HgaI | GACGC | 1 cut(s) | 1472 |
| HhaI | GCGC | 1 cut(s) | 1483 |
| Hin1II | CATG | 3 cut(s) | 70, 83, 1252 |
| Hin6I | GCGC | 1 cut(s) | 1481 |
| HinP1I | GCGC | 1 cut(s) | 1481 |
| HinfI | GANTC | 8 cut(s) | 241, 287, 632, 953, 986, 1350, 1426, 1564 |
| HpaII | CCGG | 1 cut(s) | 1418 |
| HphI | GGTGA | 1 cut(s) | 605 |
| Hpy166II | GTNNAC | 1 cut(s) | 1598 |
| Hpy188III | TCNNGA | 8 cut(s) | 17, 245, 281, 609, 1020, 1266, 1423, 1469 |
| Hpy8I | GTNNAC | 1 cut(s) | 1598 |
| HpyAV | CCTTC | 3 cut(s) | 342, 793, 1329 |
| HpyCH4III | ACNGT | 4 cut(s) | 147, 682, 1017, 1595 |
| HpyCH4IV | ACGT | 1 cut(s) | 696 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1324, 1480 |
| HpyF3I | CTNAG | 7 cut(s) | 393, 522, 648, 813, 948, 1063, 1518 |
| HpySE526I | ACGT | 1 cut(s) | 696 |
| Hsp92II | CATG | 3 cut(s) | 70, 83, 1252 |
| HspAI | GCGC | 1 cut(s) | 1481 |
| Ksp22I | TGATCA | 1 cut(s) | 1363 |
| Kzo9I | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| LmnI | GCTCC | 4 cut(s) | 1035, 1387, 1471, 1550 |
| Lsp1109I | GCAGC | 4 cut(s) | 961, 979, 1030, 1264 |
| LweI | GCATC | 8 cut(s) | 145, 798, 934, 1157, 1182, 1326, 1440, 1596 |
| MaeI | CTAG | 4 cut(s) | 86, 539, 842, 1358 |
| MaeII | ACGT | 1 cut(s) | 696 |
| MaeIII | GTNAC | 1 cut(s) | 692 |
| MalI | GATC | 9 cut(s) | 39, 192, 269, 342, 604, 1024, 1083, 1088, 1365 |
| MboI | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| MboII | GAAGA | 7 cut(s) | 263, 296, 389, 392, 597, 855, 1178 |
| MfeI | CAATTG | 3 cut(s) | 345, 748, 1167 |
| MflI | RGATCY | 2 cut(s) | 190, 602 |
| MhlI | GDGCHC | 2 cut(s) | 96, 1119 |
| MlyI | GAGTC | 5 cut(s) | 235, 641, 962, 995, 1359 |
| MmeI | TCCRAC | 1 cut(s) | 757 |
| Mph1103I | ATGCAT | 1 cut(s) | 1341 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1532 |
| MseI | TTAA | 6 cut(s) | 450, 561, 644, 660, 1374, 1634 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1376 |
| MspA1I | CMGCKG | 1 cut(s) | 992 |
| MspI | CCGG | 1 cut(s) | 1418 |
| MspR9I | CCNGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| MunI | CAATTG | 3 cut(s) | 345, 748, 1167 |
| Mva1269I | GAATGC | 1 cut(s) | 12 |
| MvaI | CCWGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| MvnI | CGCG | 1 cut(s) | 1483 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1324, 1480 |
| NcoI | CCATGG | 1 cut(s) | 66 |
| NdeI | CATATG | 1 cut(s) | 1503 |
| NdeII | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| NlaIII | CATG | 3 cut(s) | 70, 83, 1252 |
| NlaIV | GGNNCC | 8 cut(s) | 72, 262, 781, 1037, 1230, 1305, 1383, 1546 |
| NsiI | ATGCAT | 1 cut(s) | 1341 |
| NspI | RCATGY | 1 cut(s) | 1252 |
| PaeI | GCATGC | 1 cut(s) | 1252 |
| PctI | GAATGC | 1 cut(s) | 12 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1532 |
| PfeI | GAWTC | 3 cut(s) | 287, 1426, 1564 |
| PflFI | GACNNNGTC | 1 cut(s) | 1513 |
| PfoI | TCCNGGA | 1 cut(s) | 1028 |
| PinAI | ACCGGT | 1 cut(s) | 1417 |
| PkrI | GCNGC | 4 cut(s) | 976, 994, 1045, 1254 |
| PleI | GAGTC | 5 cut(s) | 235, 640, 961, 994, 1358 |
| PpsI | GAGTC | 5 cut(s) | 235, 640, 961, 994, 1358 |
| PshBI | ATTAAT | 1 cut(s) | 1374 |
| Psp124BI | GAGCTC | 2 cut(s) | 96, 1119 |
| Psp6I | CCWGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| PspFI | CCCAGC | 1 cut(s) | 1548 |
| PspGI | CCWGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| PspN4I | GGNNCC | 8 cut(s) | 72, 262, 781, 1037, 1230, 1305, 1383, 1546 |
| PspPI | GGNCC | 4 cut(s) | 71, 779, 1304, 1598 |
| PstI | CTGCAG | 1 cut(s) | 997 |
| PsuI | RGATCY | 2 cut(s) | 190, 602 |
| PsyI | GACNNNGTC | 1 cut(s) | 1513 |
| PvuII | CAGCTG | 1 cut(s) | 992 |
| RsaI | GTAC | 1 cut(s) | 1618 |
| RsaNI | GTAC | 1 cut(s) | 1617 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1376 |
| SacI | GAGCTC | 2 cut(s) | 96, 1119 |
| SaqAI | TTAA | 6 cut(s) | 450, 561, 644, 660, 1374, 1634 |
| SatI | GCNGC | 4 cut(s) | 975, 993, 1044, 1253 |
| Sau3AI | GATC | 9 cut(s) | 37, 190, 267, 340, 602, 1022, 1081, 1086, 1363 |
| Sau96I | GGNCC | 4 cut(s) | 71, 779, 1304, 1598 |
| SchI | GAGTC | 5 cut(s) | 235, 641, 962, 995, 1359 |
| ScrFI | CCNGG | 4 cut(s) | 585, 1030, 1245, 1397 |
| SduI | GDGCHC | 2 cut(s) | 96, 1119 |
| SfaNI | GCATC | 8 cut(s) | 145, 798, 934, 1157, 1182, 1326, 1440, 1596 |
| SfcI | CTRYAG | 1 cut(s) | 993 |
| SinI | GGWCC | 3 cut(s) | 779, 1304, 1598 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1376 |
| SmlI | CTYRAG | 3 cut(s) | 229, 243, 983 |
| SmoI | CTYRAG | 3 cut(s) | 229, 243, 983 |
| SpeI | ACTAGT | 1 cut(s) | 85 |
| SphI | GCATGC | 1 cut(s) | 1252 |
| SsiI | CCGC | 5 cut(s) | 194, 653, 904, 1221, 1461 |
| SspMI | CTAG | 4 cut(s) | 86, 539, 842, 1358 |
| SstI | GAGCTC | 2 cut(s) | 96, 1119 |
| StyD4I | CCNGG | 4 cut(s) | 583, 1028, 1243, 1395 |
| StyI | CCWWGG | 1 cut(s) | 66 |
| TaaI | ACNGT | 4 cut(s) | 147, 682, 1017, 1595 |
| TaiI | ACGT | 1 cut(s) | 699 |
| TaqI | TCGA | 2 cut(s) | 139, 689 |
| TfiI | GAWTC | 3 cut(s) | 287, 1426, 1564 |
| Tru1I | TTAA | 6 cut(s) | 450, 561, 644, 660, 1374, 1634 |
| Tru9I | TTAA | 6 cut(s) | 450, 561, 644, 660, 1374, 1634 |
| TscAI | CASTG | 3 cut(s) | 436, 1373, 1600 |
| TseI | GCWGC | 4 cut(s) | 974, 992, 1043, 1252 |
| TspDTI | ATGAA | 4 cut(s) | 17, 96, 264, 1541 |
| TspGWI | ACGGA | 1 cut(s) | 1090 |
| TspRI | CASTG | 3 cut(s) | 436, 1373, 1600 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1513 |
| VpaK11BI | GGWCC | 3 cut(s) | 779, 1304, 1598 |
| VspI | ATTAAT | 1 cut(s) | 1374 |
| XapI | RAATTY | 2 cut(s) | 4, 25 |
| XceI | RCATGY | 1 cut(s) | 1252 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1532 |
| XspI | CTAG | 4 cut(s) | 86, 539, 842, 1358 |
| Zsp2I | ATGCAT | 1 cut(s) | 1341 |