Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Forward (+)

71646697 .. 71648848

Gene Structure 2152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG495400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGAATTCTTGCATTCCTGATTGGAACTTTGAGAGTGATCCCCCTTTAACCAATCAAAAGAAACCCTCGGGGCCAGATCATGAACTAGTAGAGCTGTTATGGAGAAATGGGCAGGTAGTTTTGCACAGCCAAACAAATCGAAAACCAGGTCCTAATCCTAATGAGTCGAGGCAAGTTCAGAAACATGATCAAATAAGGGTTGGTGGGTTCTATGGGAACTCAGGTAATTTGATTCATGATGAGGACGCAGTCTCCATGATCCAATACCCTATAGAAGATTCCTTTGATAAAGAGTTTTCCCATTTCTTTTCTGAACTGCCTTCCTGTGATTCACTTGAGATTGAAAAGCCAATCAAACAATTTGGAGAAGAGAAGTTTGTTAAGTTTGATGCTCCTAGTACCACCCATCTTGTTTCCTCTTCACCCCAACCTAATGTGAAGTCCTCTACAGGTGTGGCATATCCTGAAAATCCAATGCCTCCTCCAAGATTTCAGATCAGTAATCCAACTGAGAAAAATCAAAATCTTGGAGGCTTGGGGAAAATAGTTAATTTTTCTCAATTTTCAACACTGGGAAAGGGTGGTGTAGGATCTTCCAGAAAACAATTAGGAGGGAAAGATCCTGGTAAGTTGAATCAAGCAGAAGTTAGAGAGTGTTCTATGATGACTGTCGGATCGAGTTACTCAGGTAGCAACCAAGTTCCTAATGACTTTGATGTGAGTCGGGCTTCAAGCAATGGTGATGGGACTACTGGTTTTTCTACTGGACCCTTGTACAACAATGTTCAAAAGATGATGCCTCTGAGTGAGGGAGGGATGACAGAAACCCTTGATCCAACTCTTACTTCATCTTCGGGTGGTTCTGGCAGTAGTTTTGGCAGAGGAGGGAAGCAGTCTAATGTTGTCAATAGCAACAAAAGAAAGGGTAGAGATGCAGAGGACTCAGAGTGCCAAAGTGAGGCAGCTGAAATTGAATCAGCTGCGGGAAACAAGCCAGCGCAACGATCAGGATCATCGAGGAGGACACGTGCTGCTGAAGTCCATAATCTCTCAGAAAGGAGACGAAGAGATCGGATCAATGAGAAAATGAGGGCACTGCAAGAGCTCATACCTCATTCTAACAAGACAGACAAAGCATCAATGTTAGATGAGGCAATTGAATACTTGAAGTCTCTTCAGCTGCAACTTCAGGTAATGTGGATGGGAGGTGGGATGGCACCGATGATGTTTCCAGGAGTGCAGCACTATATGTCCCGAATGGGAATGGGAATGGGACCGCCTGCCATGCCTTCCATGCACAATCTAATGCAATTACCTCGGGTCCCTCTAGTTGATCAGTGCATGACTGTGACTCCACCAACAAACCAGGCAGTAATGTGCCAAACACCTGTTCTGAATCCTGTTGATTACCATAACCAGATGCAAAATGCCTCTATTCAGGAGCAATACGCACGTCTCATGGGATTCCATCATATGCAGACCATGTCTCAGCCTATGAATATGTTCAGATTCGGCTCTCAGCCTCTTCCGCAAAGTCAAATGATGGCACCAACTGGCATGAACACTGGACCTTTAAGTGGTGGAGCTGCAACTAATGATGCTTTGAGTGGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

538

Amino Acids

58.86

Weight (kDa)

6.68

Isoelectric Point (pI)

59.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	346 - 393	6.3e-14	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	352 - 398	2e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	103
AccB1I	GGYRCC	2 cut(s)	1216, 1546
AciI	CCGC	3 cut(s)	983, 1277, 1529
AclWI	GGATC	8 cut(s)	32, 253, 598, 614, 682, 827, 1018, 1082
AcsI	RAATTY	1 cut(s)	4
AcuI	CTGAAG	3 cut(s)	1056, 1160, 1172
AcvI	CACGTG	1 cut(s)	1028
AfaI	GTAC	2 cut(s)	400, 776
AfiI	CCNNNNNNNGG	2 cut(s)	958, 1577
AflIII	ACRYGT	1 cut(s)	1025
AgsI	TTSAA	8 cut(s)	344, 567, 634, 732, 788, 974, 1160, 1168
AhlI	ACTAGT	1 cut(s)	85
AjiI	CACGTC	1 cut(s)	1454
AjnI	CCWGG	4 cut(s)	145, 622, 1231, 1365
AjuI	GAANNNNNNNTTGG	4 cut(s)	829, 861, 1374, 1406
AluBI	AGCT	6 cut(s)	94, 965, 980, 1105, 1180, 1586
AluI	AGCT	6 cut(s)	94, 965, 980, 1105, 1180, 1586
Alw21I	GWGCWC	1 cut(s)	1107
Alw26I	GTCTC	5 cut(s)	256, 1054, 1176, 1460, 1491
AlwI	GGATC	8 cut(s)	32, 253, 598, 614, 682, 827, 1018, 1082
Ama87I	CYCGRG	2 cut(s)	67, 1317
AoxI	GGCC	1 cut(s)	71
ApeKI	GCWGC	6 cut(s)	962, 980, 1031, 1180, 1240, 1586
ApoI	RAATTY	1 cut(s)	4
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
Asp700I	GAANNNNTTC	1 cut(s)	1502
AspLEI	GCGC	1 cut(s)	1000
AspS9I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1568
AsuHPI	GGTGA	2 cut(s)	414, 752
AvaI	CYCGRG	2 cut(s)	67, 1317
AvaII	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1568
BaeGI	GKGCMC	1 cut(s)	1096
BanI	GGYRCC	2 cut(s)	1216, 1546
BanII	GRGCYC	1 cut(s)	1107
BbrPI	CACGTG	1 cut(s)	1028
Bbv12I	GWGCWC	1 cut(s)	1107
BbvI	GCAGC	6 cut(s)	967, 974, 1018, 1167, 1252, 1573
BccI	CCATC	6 cut(s)	414, 737, 1195, 1207, 1476, 1537
BcgI	CGANNNNNNTGC	2 cut(s)	1298, 1332
BciT130I	CCWGG	4 cut(s)	147, 624, 1233, 1367
BclI	TGATCA	2 cut(s)	187, 1333
BcoDI	GTCTC	5 cut(s)	256, 1054, 1176, 1460, 1491
BcuI	ACTAGT	1 cut(s)	85
BfaI	CTAG	3 cut(s)	86, 396, 1328
BfmI	CTRYAG	2 cut(s)	270, 447
BfuAI	ACCTGC	1 cut(s)	103
BisI	GCNGC	6 cut(s)	963, 981, 1032, 1181, 1241, 1587
BlsI	GCNGC	6 cut(s)	964, 982, 1033, 1182, 1242, 1588
Bme1390I	CCNGG	4 cut(s)	147, 624, 1233, 1367
Bme18I	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1568
BmeT110I	CYCGRG	2 cut(s)	67, 1317
BmgBI	CACGTC	1 cut(s)	1454
BmgT120I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1568
BmiI	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1548
BmrFI	CCNGG	4 cut(s)	147, 624, 1233, 1367
BmrI	ACTGGG	1 cut(s)	581
BmsI	GCATC	6 cut(s)	379, 786, 922, 1145, 1410, 1588
BmuI	ACTGGG	1 cut(s)	581
BpuEI	CTTGAG	1 cut(s)	356
BsaAI	YACGTR	1 cut(s)	1028
BsaBI	GATNNNNATC	1 cut(s)	1009
BsaJI	CCNNGG	2 cut(s)	66, 1316
BsaXI	ACNNNNNCTCC	6 cut(s)	236, 266, 1012, 1042, 1336, 1366
Bsc4I	CCNNNNNNNGG	2 cut(s)	958, 1577
Bse1I	ACTGG	5 cut(s)	576, 757, 769, 1558, 1570
Bse3DI	GCAATG	1 cut(s)	742
Bse8I	GATNNNNATC	1 cut(s)	1009
BseBI	CCWGG	4 cut(s)	147, 624, 1233, 1367
BseDI	CCNNGG	2 cut(s)	66, 1316
BseGI	GGATG	3 cut(s)	822, 1206, 1218
BseJI	GATNNNNATC	1 cut(s)	1009
BseLI	CCNNNNNNNGG	2 cut(s)	958, 1577
BseMI	GCAATG	1 cut(s)	742
BseMII	CTCAG	8 cut(s)	234, 501, 699, 794, 957, 1065, 1502, 1532
BseNI	ACTGG	5 cut(s)	576, 757, 769, 1558, 1570
BseRI	GAGGAG	3 cut(s)	471, 897, 1033
BseSI	GKGCMC	1 cut(s)	1096
BseXI	GCAGC	6 cut(s)	967, 974, 1018, 1167, 1252, 1573
BsgI	GTGCAG	1 cut(s)	1259
BshFI	GGCC	1 cut(s)	73
BshNI	GGYRCC	2 cut(s)	1216, 1546
BsiHKAI	GWGCWC	1 cut(s)	1107
BsiHKCI	CYCGRG	2 cut(s)	67, 1317
BslFI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
BslI	CCNNNNNNNGG	2 cut(s)	958, 1577
BsmAI	GTCTC	5 cut(s)	256, 1054, 1176, 1460, 1491
BsmBI	CGTCTC	2 cut(s)	1054, 1460
BsmFI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
BsmI	GAATGC	1 cut(s)	12
BsnI	GGCC	1 cut(s)	73
BsoBI	CYCGRG	2 cut(s)	67, 1317
Bsp1286I	GDGCHC	2 cut(s)	1096, 1107
Bsp1407I	TGTACA	1 cut(s)	774
BspACI	CCGC	3 cut(s)	983, 1277, 1529
BspANI	GGCC	1 cut(s)	73
BspCNI	CTCAG	8 cut(s)	233, 502, 698, 795, 956, 1064, 1501, 1531
BspHI	TCATGA	2 cut(s)	79, 235
BspLI	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1548
BspMI	ACCTGC	1 cut(s)	103
BspPI	GGATC	8 cut(s)	32, 253, 598, 614, 682, 827, 1018, 1082
BspT107I	GGYRCC	2 cut(s)	1216, 1546
BsrDI	GCAATG	1 cut(s)	742
BsrGI	TGTACA	1 cut(s)	774
BsrI	ACTGG	5 cut(s)	576, 757, 769, 1558, 1570
BssECI	CCNNGG	2 cut(s)	66, 1316
Bst2UI	CCWGG	4 cut(s)	147, 624, 1233, 1367
Bst4CI	ACNGT	2 cut(s)	670, 1348
Bst6I	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1530
BstAUI	TGTACA	1 cut(s)	774
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	2 cut(s)	996, 1281
BstDEI	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1488, 1518
BstF5I	GGATG	3 cut(s)	822, 1206, 1218
BstHHI	GCGC	1 cut(s)	1000
BstMAI	GTCTC	5 cut(s)	256, 1054, 1176, 1460, 1491
BstMWI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1528
BstNI	CCWGG	4 cut(s)	147, 624, 1233, 1367
BstSCI	CCNGG	4 cut(s)	145, 622, 1231, 1365
BstSFI	CTRYAG	2 cut(s)	270, 447
BstSLI	GKGCMC	1 cut(s)	1096
BstV1I	GCAGC	6 cut(s)	967, 974, 1018, 1167, 1252, 1573
BstX2I	RGATCY	2 cut(s)	590, 619
BstYI	RGATCY	2 cut(s)	590, 619
BsuRI	GGCC	1 cut(s)	73
BtrI	CACGTC	1 cut(s)	1454
BtsCI	GGATG	3 cut(s)	822, 1206, 1218
BtsI	GCAGTG	1 cut(s)	1094
BtsIMutI	CAGTG	4 cut(s)	569, 1094, 1343, 1563
BveI	ACCTGC	1 cut(s)	103
Cac8I	GCNNGC	2 cut(s)	996, 1281
CciI	TCATGA	2 cut(s)	79, 235
CfoI	GCGC	1 cut(s)	1000
Cfr13I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1568
CseI	GACGC	1 cut(s)	254
CsiI	ACCWGGT	1 cut(s)	145
Csp6I	GTAC	2 cut(s)	399, 775
CspCI	CAANNNNNGTGG	2 cut(s)	391, 426
CviQI	GTAC	2 cut(s)	399, 775
DdeI	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1488, 1518
Eam1104I	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1530
EarI	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1530
Ecl136II	GAGCTC	1 cut(s)	1105
Eco24I	GRGCYC	1 cut(s)	1107
Eco47I	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1568
Eco53kI	GAGCTC	1 cut(s)	1105
Eco57I	CTGAAG	3 cut(s)	1056, 1160, 1172
Eco72I	CACGTG	1 cut(s)	1028
Eco88I	CYCGRG	2 cut(s)	67, 1317
EcoICRI	GAGCTC	1 cut(s)	1105
EcoO109I	RGGNCCY	2 cut(s)	149, 1321
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	4 cut(s)	145, 622, 1231, 1365
EcoT38I	GRGCYC	1 cut(s)	1107
Esp3I	CGTCTC	2 cut(s)	1054, 1460
FaqI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
FauI	CCCGC	1 cut(s)	976
FauNDI	CATATG	1 cut(s)	1473
FbaI	TGATCA	2 cut(s)	187, 1333
Fnu4HI	GCNGC	6 cut(s)	963, 981, 1032, 1181, 1241, 1587
FokI	GGATG	3 cut(s)	829, 1213, 1225
FriOI	GRGCYC	1 cut(s)	1107
Fsp4HI	GCNGC	6 cut(s)	963, 981, 1032, 1181, 1241, 1587
FspBI	CTAG	3 cut(s)	86, 396, 1328
GlaI	GCGC	1 cut(s)	999
GluI	GCNGC	6 cut(s)	963, 981, 1032, 1181, 1241, 1587
HaeIII	GGCC	1 cut(s)	73
HgaI	GACGC	1 cut(s)	254
HhaI	GCGC	1 cut(s)	1000
Hin6I	GCGC	1 cut(s)	998
HinP1I	GCGC	1 cut(s)	998
HphI	GGTGA	2 cut(s)	414, 752
Hpy188III	TCNNGA	8 cut(s)	17, 80, 236, 464, 597, 1008, 1254, 1439
HpyAV	CCTTC	2 cut(s)	330, 1299
HpyCH4III	ACNGT	2 cut(s)	670, 1348
HpyCH4IV	ACGT	2 cut(s)	1027, 1453
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1528
HpyF3I	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1488, 1518
HpySE526I	ACGT	2 cut(s)	1027, 1453
HspAI	GCGC	1 cut(s)	998
KflI	GGGWCCC	1 cut(s)	1321
Ksp22I	TGATCA	2 cut(s)	187, 1333
LmnI	GCTCC	3 cut(s)	397, 1441, 1583
Lsp1109I	GCAGC	6 cut(s)	967, 974, 1018, 1167, 1252, 1573
LweI	GCATC	6 cut(s)	379, 786, 922, 1145, 1410, 1588
MabI	ACCWGGT	1 cut(s)	145
MaeI	CTAG	3 cut(s)	86, 396, 1328
MaeII	ACGT	2 cut(s)	1027, 1453
MaeIII	GTNAC	2 cut(s)	680, 1348
MboII	GAAGA	8 cut(s)	287, 380, 411, 585, 843, 1077, 1166, 1517
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	2 cut(s)	590, 619
MhlI	GDGCHC	2 cut(s)	1096, 1107
MluCI	AATT	9 cut(s)	4, 226, 359, 550, 560, 605, 969, 1155, 1310
MlyI	GAGTC	4 cut(s)	173, 730, 935, 1345
MmeI	TCCRAC	3 cut(s)	530, 652, 860
MroXI	GAANNNNTTC	1 cut(s)	1502
MseI	TTAA	4 cut(s)	47, 381, 549, 1574
MslI	CAYNNNNRTG	1 cut(s)	1346
MspA1I	CMGCKG	3 cut(s)	965, 980, 1180
MspR9I	CCNGG	4 cut(s)	147, 624, 1233, 1367
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	12
MvaI	CCWGG	4 cut(s)	147, 624, 1233, 1367
MwoI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1528
NdeI	CATATG	1 cut(s)	1473
NlaIV	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1548
NmuCI	GTSAC	1 cut(s)	1348
PagI	TCATGA	2 cut(s)	79, 235
PctI	GAATGC	1 cut(s)	12
PdmI	GAANNNNTTC	1 cut(s)	1502
PfeI	GAWTC	8 cut(s)	232, 278, 329, 634, 974, 1396, 1464, 1509
PflFI	GACNNNGTC	2 cut(s)	248, 1483
PfoI	TCCNGGA	1 cut(s)	1231
PkrI	GCNGC	6 cut(s)	964, 982, 1033, 1182, 1242, 1588
PleI	GAGTC	4 cut(s)	172, 729, 935, 1345
PmaCI	CACGTG	1 cut(s)	1028
PmlI	CACGTG	1 cut(s)	1028
PpsI	GAGTC	4 cut(s)	172, 729, 935, 1345
Ppu21I	YACGTR	1 cut(s)	1028
PpuMI	RGGWCCY	2 cut(s)	149, 1321
Psp124BI	GAGCTC	1 cut(s)	1107
Psp5II	RGGWCCY	2 cut(s)	149, 1321
Psp6I	CCWGG	4 cut(s)	145, 622, 1231, 1365
PspCI	CACGTG	1 cut(s)	1028
PspGI	CCWGG	4 cut(s)	145, 622, 1231, 1365
PspN4I	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1548
PspPI	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1568
PspPPI	RGGWCCY	2 cut(s)	149, 1321
PsuI	RGATCY	2 cut(s)	590, 619
PsyI	GACNNNGTC	2 cut(s)	248, 1483
PvuII	CAGCTG	3 cut(s)	965, 980, 1180
RsaI	GTAC	2 cut(s)	400, 776
RsaNI	GTAC	2 cut(s)	399, 775
RseI	CAYNNNNRTG	1 cut(s)	1346
SacI	GAGCTC	1 cut(s)	1107
SaqAI	TTAA	4 cut(s)	47, 381, 549, 1574
SatI	GCNGC	6 cut(s)	963, 981, 1032, 1181, 1241, 1587
Sau96I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1568
SchI	GAGTC	4 cut(s)	173, 730, 935, 1345
ScrFI	CCNGG	4 cut(s)	147, 624, 1233, 1367
SduI	GDGCHC	2 cut(s)	1096, 1107
SexAI	ACCWGGT	1 cut(s)	145
SfaNI	GCATC	6 cut(s)	379, 786, 922, 1145, 1410, 1588
SfcI	CTRYAG	2 cut(s)	270, 447
SinI	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1568
SmiMI	CAYNNNNRTG	1 cut(s)	1346
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
SpeI	ACTAGT	1 cut(s)	85
Sse9I	AATT	9 cut(s)	4, 226, 359, 550, 560, 605, 969, 1155, 1310
SsiI	CCGC	3 cut(s)	983, 1277, 1529
SspMI	CTAG	3 cut(s)	86, 396, 1328
SstI	GAGCTC	1 cut(s)	1107
StyD4I	CCNGG	4 cut(s)	145, 622, 1231, 1365
TaaI	ACNGT	2 cut(s)	670, 1348
TaiI	ACGT	2 cut(s)	1030, 1456
TaqI	TCGA	4 cut(s)	139, 167, 677, 1016
TasI	AATT	9 cut(s)	4, 226, 359, 550, 560, 605, 969, 1155, 1310
TatI	WGTACW	1 cut(s)	774
TfiI	GAWTC	8 cut(s)	232, 278, 329, 634, 974, 1396, 1464, 1509
Tru1I	TTAA	4 cut(s)	47, 381, 549, 1574
Tru9I	TTAA	4 cut(s)	47, 381, 549, 1574
TscAI	CASTG	4 cut(s)	576, 1101, 1343, 1570
TseFI	GTSAC	1 cut(s)	1348
TseI	GCWGC	6 cut(s)	962, 980, 1031, 1180, 1240, 1586
Tsp45I	GTSAC	1 cut(s)	1348
TspDTI	ATGAA	6 cut(s)	17, 96, 224, 837, 1511, 1574
TspRI	CASTG	4 cut(s)	576, 1101, 1343, 1570
Tth111I	GACNNNGTC	2 cut(s)	248, 1483
VpaK11BI	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1568
XapI	RAATTY	1 cut(s)	4
XmnI	GAANNNNTTC	1 cut(s)	1502
XspI	CTAG	3 cut(s)	86, 396, 1328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.