Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Forward (+)

66369031 .. 66373082

Gene Structure 4052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G040760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGAATTCTTGCATTCCTGATTGGAACTTTGAGGGTGATCTCCCTTTAACCAATCAAAAGAAACCCTTGGGGCCAGATCATGAACTAGTAGAGCTGTTATGGAGAAATGGGCAGGTAGTTTTGCACAGCCAAACAAATCGAAAACCAGGTCCTAATCCTAATGAGTCGAGGCAAGTTCAGAAACATGATCAAATAAGGGTTGGTGGGTTCTATGGGAACTCAGGTAATTTGATTCATGATGAGGACGCAGTCTCCATGATCCAATACCCTATAGAAGATTCCTTTGATAAAGAGTTTTCCCATTTCTTTTCTGAACTGCCTTCCTGTGATTCACTTGAGATTGAAAAGCCAATCAAACAATTTGGAGAAGAGAAGTTTGTTAAGTTTGATGCTCCTAGTACCACCAATCTTGTTTCCTCTTCACCCCAACCTAATGTGAAGTCCTCTACCGGTGTGGCATATCCTGAAAATCCAATGCCTCCTCCAAGATTTCAGATCAGTAATCCAACTGAGAAAAATCAAAATCTTGGAGGCTTGGGGAAAATAGTTAGTTTTTCTCAATTTTCAACACTGGGAAAGGGTGTTGTAGGATCTTCCAGAAAACAATTAGGAGGGAAAGATCCTGGTAAGTTGAATCAAGCAGAAGTTAGAGAGTGTTCTATGATGACTGTTGGATCGAGTTACTCAGGTAGCAACCAAGTTCCTAATGACTTTGATGTGAGTCGGGCTTCAAGCAATGGTGATGGGACTACTGGTTTTTCTACTGGACCCTTGTACAACAATGTTCAAAAGATGATGCCTCTGAGTGAGGGAGGGATGACAGAAACCCTTGATCCAACTCTTACTTCATCTTCGGGTGGTTCTGGCAGTAGTTTTGGCAGAGGAGGGAAGCAGTCTAATGTTGTCAATAGCAACAAAAGAAAGGGTAGAGATGCAGAGGACTCAGAGTGCCAAAGTGAGGCAGCTGAAATTGAATCAGCAGCGGGAAACAAGCCAGCGCAACGATCAGGATCATCGAGGAGGACACGTGCTGCTGAAGTCCATAATCTCTCAGAAAGGAGACGAAGAGATCGGATCAATGAGAAAATGAAGGCACTGCAAGAGCTCATACCTCATTCTAACAAGACAGACAAAGCATCAATGTTAGATGAGGCAATTGAATACTTGAAGTCTCTTCAGCTGCAACTTCAGGTAATGTGGATGGGAGGTGGGATGGCACCGATGATGTTTCCAGGAGTACAGCACTATATGTCCCGAATGGGAATGGGAATGGGACCGCCTGCCATGCCTTCTATGCACAATCTAATGCAATTACCTCGGGTCCCTGTAGTTGATCAGTGCATGACTCCACCAACAAACCAGGCAGTAATGTGCCAAACACCTGTTCTGAATCCTGTTGATTACCATAACCAGATGCAAAATCCCTCTATTCAGGAGCAATACGCACGTCTCATGGGATTCCATCATATGCAGACCATGTCTCAGCCTATGAATATGTTCAGATTCGGCTCTCAGCCTCTTCCGCAAAGTCAAATGATGGCACCAACTGGCATGAACACTGGACCTTTAAGTGGTGGAGCTGCAACTAATGATGCTTTGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

534

Amino Acids

58.49

Weight (kDa)

6.48

Isoelectric Point (pI)

59.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	346 - 393	1.5e-14	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	352 - 398	2e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	103
AccB1I	GGYRCC	2 cut(s)	1216, 1540
AciI	CCGC	3 cut(s)	983, 1277, 1523
AclWI	GGATC	7 cut(s)	253, 598, 614, 682, 827, 1018, 1082
AcsI	RAATTY	1 cut(s)	4
AcuI	CTGAAG	3 cut(s)	1056, 1160, 1172
AcvI	CACGTG	1 cut(s)	1028
AfaI	GTAC	3 cut(s)	400, 776, 1239
AfiI	CCNNNNNNNGG	2 cut(s)	958, 1571
AflIII	ACRYGT	1 cut(s)	1025
AgeI	ACCGGT	1 cut(s)	449
AgsI	TTSAA	8 cut(s)	344, 567, 634, 732, 788, 974, 1160, 1168
AhlI	ACTAGT	1 cut(s)	85
AjiI	CACGTC	1 cut(s)	1448
AjnI	CCWGG	4 cut(s)	145, 622, 1231, 1359
AjuI	GAANNNNNNNTTGG	4 cut(s)	829, 861, 1368, 1400
AluBI	AGCT	5 cut(s)	94, 965, 1105, 1180, 1580
AluI	AGCT	5 cut(s)	94, 965, 1105, 1180, 1580
Alw21I	GWGCWC	1 cut(s)	1107
Alw26I	GTCTC	5 cut(s)	256, 1054, 1176, 1454, 1485
AlwI	GGATC	7 cut(s)	253, 598, 614, 682, 827, 1018, 1082
Ama87I	CYCGRG	1 cut(s)	1317
AoxI	GGCC	1 cut(s)	71
ApeKI	GCWGC	5 cut(s)	962, 980, 1031, 1180, 1580
ApoI	RAATTY	1 cut(s)	4
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
AsiGI	ACCGGT	1 cut(s)	449
Asp700I	GAANNNNTTC	1 cut(s)	1496
AspLEI	GCGC	1 cut(s)	1000
AspS9I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1562
AsuHPI	GGTGA	3 cut(s)	47, 414, 752
AvaI	CYCGRG	1 cut(s)	1317
AvaII	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1562
BanI	GGYRCC	2 cut(s)	1216, 1540
BanII	GRGCYC	1 cut(s)	1107
BbrPI	CACGTG	1 cut(s)	1028
Bbv12I	GWGCWC	1 cut(s)	1107
BbvI	GCAGC	5 cut(s)	974, 992, 1018, 1167, 1567
BccI	CCATC	5 cut(s)	737, 1195, 1207, 1470, 1531
BcgI	CGANNNNNNTGC	2 cut(s)	1298, 1332
BciT130I	CCWGG	4 cut(s)	147, 624, 1233, 1361
BclI	TGATCA	2 cut(s)	187, 1333
BcoDI	GTCTC	5 cut(s)	256, 1054, 1176, 1454, 1485
BcuI	ACTAGT	1 cut(s)	85
BfaI	CTAG	3 cut(s)	86, 396, 1603
BfmI	CTRYAG	2 cut(s)	270, 1326
BfuAI	ACCTGC	1 cut(s)	103
BisI	GCNGC	5 cut(s)	963, 981, 1032, 1181, 1581
BlsI	GCNGC	5 cut(s)	964, 982, 1033, 1182, 1582
Bme1390I	CCNGG	4 cut(s)	147, 624, 1233, 1361
Bme18I	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1562
BmeT110I	CYCGRG	1 cut(s)	1317
BmgBI	CACGTC	1 cut(s)	1448
BmgT120I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1562
BmiI	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1542
BmrFI	CCNGG	4 cut(s)	147, 624, 1233, 1361
BmrI	ACTGGG	1 cut(s)	581
BmsI	GCATC	6 cut(s)	379, 786, 922, 1145, 1404, 1582
BmuI	ACTGGG	1 cut(s)	581
BpuEI	CTTGAG	1 cut(s)	356
BsaAI	YACGTR	1 cut(s)	1028
BsaBI	GATNNNNATC	1 cut(s)	1009
BsaJI	CCNNGG	2 cut(s)	66, 1316
BsaWI	WCCGGW	1 cut(s)	449
BsaXI	ACNNNNNCTCC	4 cut(s)	236, 266, 1012, 1042
Bsc4I	CCNNNNNNNGG	2 cut(s)	958, 1571
Bse118I	RCCGGY	1 cut(s)	449
Bse1I	ACTGG	5 cut(s)	576, 757, 769, 1552, 1564
Bse3DI	GCAATG	1 cut(s)	742
Bse8I	GATNNNNATC	1 cut(s)	1009
BseBI	CCWGG	4 cut(s)	147, 624, 1233, 1361
BseDI	CCNNGG	2 cut(s)	66, 1316
BseGI	GGATG	3 cut(s)	822, 1206, 1218
BseJI	GATNNNNATC	1 cut(s)	1009
BseLI	CCNNNNNNNGG	2 cut(s)	958, 1571
BseMI	GCAATG	1 cut(s)	742
BseMII	CTCAG	8 cut(s)	234, 501, 699, 794, 957, 1065, 1496, 1526
BseNI	ACTGG	5 cut(s)	576, 757, 769, 1552, 1564
BseRI	GAGGAG	3 cut(s)	471, 897, 1033
BseXI	GCAGC	5 cut(s)	974, 992, 1018, 1167, 1567
BshFI	GGCC	1 cut(s)	73
BshNI	GGYRCC	2 cut(s)	1216, 1540
BshTI	ACCGGT	1 cut(s)	449
BsiHKAI	GWGCWC	1 cut(s)	1107
BsiHKCI	CYCGRG	1 cut(s)	1317
BsiSI	CCGG	1 cut(s)	450
BslFI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
BslI	CCNNNNNNNGG	2 cut(s)	958, 1571
BsmAI	GTCTC	5 cut(s)	256, 1054, 1176, 1454, 1485
BsmBI	CGTCTC	2 cut(s)	1054, 1454
BsmFI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
BsmI	GAATGC	1 cut(s)	12
BsnI	GGCC	1 cut(s)	73
BsoBI	CYCGRG	1 cut(s)	1317
Bsp1286I	GDGCHC	1 cut(s)	1107
Bsp1407I	TGTACA	1 cut(s)	774
BspACI	CCGC	3 cut(s)	983, 1277, 1523
BspANI	GGCC	1 cut(s)	73
BspCNI	CTCAG	8 cut(s)	233, 502, 698, 795, 956, 1064, 1495, 1525
BspHI	TCATGA	2 cut(s)	79, 235
BspLI	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1542
BspMI	ACCTGC	1 cut(s)	103
BspPI	GGATC	7 cut(s)	253, 598, 614, 682, 827, 1018, 1082
BspT107I	GGYRCC	2 cut(s)	1216, 1540
BsrDI	GCAATG	1 cut(s)	742
BsrFI	RCCGGY	1 cut(s)	449
BsrGI	TGTACA	1 cut(s)	774
BsrI	ACTGG	5 cut(s)	576, 757, 769, 1552, 1564
BssAI	RCCGGY	1 cut(s)	449
BssECI	CCNNGG	2 cut(s)	66, 1316
BssT1I	CCWWGG	1 cut(s)	66
Bst2UI	CCWGG	4 cut(s)	147, 624, 1233, 1361
Bst4CI	ACNGT	1 cut(s)	670
Bst6I	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1524
BstAUI	TGTACA	1 cut(s)	774
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	2 cut(s)	996, 1281
BstDEI	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1482, 1512
BstF5I	GGATG	3 cut(s)	822, 1206, 1218
BstHHI	GCGC	1 cut(s)	1000
BstMAI	GTCTC	5 cut(s)	256, 1054, 1176, 1454, 1485
BstMWI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1522
BstNI	CCWGG	4 cut(s)	147, 624, 1233, 1361
BstSCI	CCNGG	4 cut(s)	145, 622, 1231, 1359
BstSFI	CTRYAG	2 cut(s)	270, 1326
BstV1I	GCAGC	5 cut(s)	974, 992, 1018, 1167, 1567
BstX2I	RGATCY	2 cut(s)	590, 619
BstYI	RGATCY	2 cut(s)	590, 619
BsuRI	GGCC	1 cut(s)	73
BtrI	CACGTC	1 cut(s)	1448
BtsCI	GGATG	3 cut(s)	822, 1206, 1218
BtsI	GCAGTG	1 cut(s)	1094
BtsIMutI	CAGTG	4 cut(s)	569, 1094, 1343, 1557
BveI	ACCTGC	1 cut(s)	103
Cac8I	GCNNGC	2 cut(s)	996, 1281
CciI	TCATGA	2 cut(s)	79, 235
CfoI	GCGC	1 cut(s)	1000
Cfr10I	RCCGGY	1 cut(s)	449
Cfr13I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1562
CseI	GACGC	1 cut(s)	254
CsiI	ACCWGGT	1 cut(s)	145
Csp6I	GTAC	3 cut(s)	399, 775, 1238
CspAI	ACCGGT	1 cut(s)	449
CspCI	CAANNNNNGTGG	2 cut(s)	391, 426
CviAII	CATG	9 cut(s)	80, 185, 236, 256, 1285, 1342, 1453, 1477, 1552
CviQI	GTAC	3 cut(s)	399, 775, 1238
DdeI	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1482, 1512
Eam1104I	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1524
EarI	CTCTTC	5 cut(s)	363, 424, 1060, 1179, 1524
Ecl136II	GAGCTC	1 cut(s)	1105
Eco130I	CCWWGG	1 cut(s)	66
Eco24I	GRGCYC	1 cut(s)	1107
Eco47I	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1562
Eco53kI	GAGCTC	1 cut(s)	1105
Eco57I	CTGAAG	3 cut(s)	1056, 1160, 1172
Eco72I	CACGTG	1 cut(s)	1028
Eco88I	CYCGRG	1 cut(s)	1317
EcoICRI	GAGCTC	1 cut(s)	1105
EcoO109I	RGGNCCY	2 cut(s)	149, 1321
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	4 cut(s)	145, 622, 1231, 1359
EcoT14I	CCWWGG	1 cut(s)	66
EcoT38I	GRGCYC	1 cut(s)	1107
ErhI	CCWWGG	1 cut(s)	66
Esp3I	CGTCTC	2 cut(s)	1054, 1454
FaeI	CATG	9 cut(s)	83, 188, 239, 259, 1288, 1345, 1456, 1480, 1555
FalI	AAGNNNNNCTT	2 cut(s)	50, 82
FaqI	GGGAC	4 cut(s)	760, 1237, 1287, 1307
FatI	CATG	9 cut(s)	79, 184, 235, 255, 1284, 1341, 1452, 1476, 1551
FauI	CCCGC	1 cut(s)	976
FauNDI	CATATG	1 cut(s)	1467
FbaI	TGATCA	2 cut(s)	187, 1333
Fnu4HI	GCNGC	5 cut(s)	963, 981, 1032, 1181, 1581
FokI	GGATG	3 cut(s)	829, 1213, 1225
FriOI	GRGCYC	1 cut(s)	1107
Fsp4HI	GCNGC	5 cut(s)	963, 981, 1032, 1181, 1581
FspBI	CTAG	3 cut(s)	86, 396, 1603
GlaI	GCGC	1 cut(s)	999
GluI	GCNGC	5 cut(s)	963, 981, 1032, 1181, 1581
HaeIII	GGCC	1 cut(s)	73
HapII	CCGG	1 cut(s)	450
HgaI	GACGC	1 cut(s)	254
HhaI	GCGC	1 cut(s)	1000
Hin1II	CATG	9 cut(s)	83, 188, 239, 259, 1288, 1345, 1456, 1480, 1555
Hin6I	GCGC	1 cut(s)	998
HinP1I	GCGC	1 cut(s)	998
HpaII	CCGG	1 cut(s)	450
HphI	GGTGA	3 cut(s)	47, 414, 752
Hpy188I	TCNGA	9 cut(s)	180, 313, 495, 804, 946, 1054, 1074, 1389, 1502
Hpy188III	TCNNGA	8 cut(s)	17, 80, 236, 464, 597, 1008, 1254, 1433
HpyAV	CCTTC	3 cut(s)	330, 1084, 1299
HpyCH4III	ACNGT	1 cut(s)	670
HpyCH4IV	ACGT	2 cut(s)	1027, 1447
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1522
HpyF3I	CTNAG	8 cut(s)	220, 510, 685, 803, 943, 1051, 1482, 1512
HpySE526I	ACGT	2 cut(s)	1027, 1447
Hsp92II	CATG	9 cut(s)	83, 188, 239, 259, 1288, 1345, 1456, 1480, 1555
HspAI	GCGC	1 cut(s)	998
KflI	GGGWCCC	1 cut(s)	1321
Ksp22I	TGATCA	2 cut(s)	187, 1333
LmnI	GCTCC	3 cut(s)	397, 1435, 1577
Lsp1109I	GCAGC	5 cut(s)	974, 992, 1018, 1167, 1567
LweI	GCATC	6 cut(s)	379, 786, 922, 1145, 1404, 1582
MabI	ACCWGGT	1 cut(s)	145
MaeI	CTAG	3 cut(s)	86, 396, 1603
MaeII	ACGT	2 cut(s)	1027, 1447
MaeIII	GTNAC	1 cut(s)	680
MboII	GAAGA	8 cut(s)	287, 380, 411, 585, 843, 1077, 1166, 1511
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	2 cut(s)	590, 619
MhlI	GDGCHC	1 cut(s)	1107
MluCI	AATT	8 cut(s)	4, 226, 359, 560, 605, 969, 1155, 1310
MlyI	GAGTC	4 cut(s)	173, 730, 935, 1339
MmeI	TCCRAC	3 cut(s)	530, 652, 860
MroXI	GAANNNNTTC	1 cut(s)	1496
MseI	TTAA	3 cut(s)	47, 381, 1568
MspA1I	CMGCKG	3 cut(s)	965, 983, 1180
MspI	CCGG	1 cut(s)	450
MspR9I	CCNGG	4 cut(s)	147, 624, 1233, 1361
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	12
MvaI	CCWGG	4 cut(s)	147, 624, 1233, 1361
MwoI	GCNNNNNNNGC	3 cut(s)	1285, 1294, 1522
NdeI	CATATG	1 cut(s)	1467
NlaIII	CATG	9 cut(s)	83, 188, 239, 259, 1288, 1345, 1456, 1480, 1555
NlaIV	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1542
PagI	TCATGA	2 cut(s)	79, 235
PctI	GAATGC	1 cut(s)	12
PdmI	GAANNNNTTC	1 cut(s)	1496
PfeI	GAWTC	8 cut(s)	232, 278, 329, 634, 974, 1390, 1458, 1503
PflFI	GACNNNGTC	2 cut(s)	248, 1477
PfoI	TCCNGGA	1 cut(s)	1231
PinAI	ACCGGT	1 cut(s)	449
PkrI	GCNGC	5 cut(s)	964, 982, 1033, 1182, 1582
PleI	GAGTC	4 cut(s)	172, 729, 935, 1339
PmaCI	CACGTG	1 cut(s)	1028
PmlI	CACGTG	1 cut(s)	1028
PpsI	GAGTC	4 cut(s)	172, 729, 935, 1339
Ppu21I	YACGTR	1 cut(s)	1028
PpuMI	RGGWCCY	2 cut(s)	149, 1321
Psp124BI	GAGCTC	1 cut(s)	1107
Psp5II	RGGWCCY	2 cut(s)	149, 1321
Psp6I	CCWGG	4 cut(s)	145, 622, 1231, 1359
PspCI	CACGTG	1 cut(s)	1028
PspGI	CCWGG	4 cut(s)	145, 622, 1231, 1359
PspN4I	GGNNCC	7 cut(s)	72, 769, 1218, 1275, 1322, 1323, 1542
PspPI	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1562
PspPPI	RGGWCCY	2 cut(s)	149, 1321
PsuI	RGATCY	2 cut(s)	590, 619
PsyI	GACNNNGTC	2 cut(s)	248, 1477
PvuII	CAGCTG	2 cut(s)	965, 1180
RsaI	GTAC	3 cut(s)	400, 776, 1239
RsaNI	GTAC	3 cut(s)	399, 775, 1238
SacI	GAGCTC	1 cut(s)	1107
SaqAI	TTAA	3 cut(s)	47, 381, 1568
SatI	GCNGC	5 cut(s)	963, 981, 1032, 1181, 1581
Sau96I	GGNCC	6 cut(s)	71, 149, 767, 1274, 1321, 1562
SchI	GAGTC	4 cut(s)	173, 730, 935, 1339
ScrFI	CCNGG	4 cut(s)	147, 624, 1233, 1361
SduI	GDGCHC	1 cut(s)	1107
SexAI	ACCWGGT	1 cut(s)	145
SfaNI	GCATC	6 cut(s)	379, 786, 922, 1145, 1404, 1582
SfcI	CTRYAG	2 cut(s)	270, 1326
SinI	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1562
SmlI	CTYRAG	1 cut(s)	335
SmoI	CTYRAG	1 cut(s)	335
SpeI	ACTAGT	1 cut(s)	85
Sse9I	AATT	8 cut(s)	4, 226, 359, 560, 605, 969, 1155, 1310
SsiI	CCGC	3 cut(s)	983, 1277, 1523
SspMI	CTAG	3 cut(s)	86, 396, 1603
SstI	GAGCTC	1 cut(s)	1107
StyD4I	CCNGG	4 cut(s)	145, 622, 1231, 1359
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	1 cut(s)	670
TaiI	ACGT	2 cut(s)	1030, 1450
TaqI	TCGA	4 cut(s)	139, 167, 677, 1016
TasI	AATT	8 cut(s)	4, 226, 359, 560, 605, 969, 1155, 1310
TatI	WGTACW	2 cut(s)	774, 1237
TfiI	GAWTC	8 cut(s)	232, 278, 329, 634, 974, 1390, 1458, 1503
Tru1I	TTAA	3 cut(s)	47, 381, 1568
Tru9I	TTAA	3 cut(s)	47, 381, 1568
TscAI	CASTG	4 cut(s)	576, 1101, 1343, 1564
TseI	GCWGC	5 cut(s)	962, 980, 1031, 1180, 1580
TspDTI	ATGAA	7 cut(s)	17, 96, 224, 837, 1103, 1505, 1568
TspRI	CASTG	4 cut(s)	576, 1101, 1343, 1564
Tth111I	GACNNNGTC	2 cut(s)	248, 1477
VpaK11BI	GGWCC	5 cut(s)	149, 767, 1274, 1321, 1562
XapI	RAATTY	1 cut(s)	4
XmnI	GAANNNNTTC	1 cut(s)	1496
XspI	CTAG	3 cut(s)	86, 396, 1603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.