Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005366.1

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Reverse (-)

10659 .. 18282

Gene Structure 7624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005366.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2514 bp

atggctatgcatgttagcagtgcagggttttcaattttcagtcacaggagagttaatagagtcagagctgttgcttctgaaaatgtgagcatagaggaacagaaggtgaagttgggggcttctgatttgaaggtgacaaagcttgggattggagcttggtcttggggtgacaccagttattggaataactttgaatgggacgataggaagatgaaggctgctaagaatgcgtttgatgccagcattgatggtggcataaccttctttgatactgctgaagtttatggctccagggcttctttcggataccttgatggtcttggagatgctgttgagcaaggccttgtgaaggcagttggtgtctcaaactatagagaaaagagattgcgtgatgcatacgagaaactcaaaaagagaggtatcccactagcatcaaaccaagtgaattacagcctcatatacagggcaccagaggagaacggagttaaggctacctgtgacgaacttgggatcactttgattgcctattcacctattgctcaaggtgttcttacaggaaagtatactcctgaaaatattccaactggccctcgaggccagatttacactcgtgattttattacaaagctccaacctctgcttaacagaatcaaggaaataggagagaagtacagtaaaacacctacacaggtagccttaaactggctaataacccaggacaatgtcgtgccaattccaggagccaaaaatgcagaacaggctatggaatttgcgggtgcgcttggatggaagctcaacgatgatgaagtaactgagttgcgctctttggcttccgagattaaacctctcaagagaagtcagagctgtgctttgatcggaacttctgtctgttcagacatgaattcttgcattcctgattggaactttgagggtgatctccctttaaccaatcaaaagaaacccttggggccagatcatgaactagtagagctgttatggagaaatgggcaggtagttttgcacagccaaacaaatcgaaaaccaggtcctaatcctaatgagtcgaggcaagttcagaaacatgatcaaataagggttggtgggttctatgggaactcaggtaatttgattcatgatgaggacgcagtctccatgatccaataccctatagaagattcctttgataaagagttttcccatttcttttctgaactgccttcctgtgattcacttgagattgaaaagccaatcaaacaatttggagaagagaagtttgttaagtttgatgcttctagtaccacccatcttgtttcctcttcaccccaacctaatgtgaagtcctctaccggtgtggcatatcctgaaaatccaatgcctcctccaagatttcagatcagtaatccaactgacaaaaatcaaaatcttggaggcttggggaaaatagttaatttttctcaattttcaacactgggaaagggtgttgtaggatcttctagaaaacaattaggagggaaagatcctggtaagttgaatcaagcagaagttagagagtgttctatgatgactgttggatcgagttactcaggtagcaaccaagttcctaatgactttgatgtgagtcgggcttcaagcaatggtgatgggactactggtttttctactggacccttgtacaacaatgttcaaaagatgatgcctctgagtgagggagggatgacagaaacccttgatccaactcttacttcatcttcgggtggttctggcagtagttttggcagaggagggaagcagtctaatgttgtcaatagcaacaaaagaaagggtagagatgcagaggactcagagtgccaaagtgaggcagctgaaattgaatcagctgcgggaaacaagccagcgcaacgatcaggatcatcgaggaggacacgtgctgctgaagtccataatctctcagaaaggagacgaagagatcggatcaatgagaaaatgaaggcactgcaagagctcatacctcattctaacaagacagacaaagcatcaatgttagatgaggcaattgaatacttgaagtctcttcagctgcaacttcaggtaatgtggatgggaggtgggatggcaccgatgatgtttccaggagtacagcactatatgtcccgaatgggaatgggaatgggaccgcctgccatgccttctatgcacaatctaatgcaattacctcgggtccctctagttgatcagtgcatgactgtgactccaccaacaaaccaggcagtaatgtgccaaacacctgttctgaatcctgttgattaccataaccagatgcaaaatccctctattcaggagcaatacgcacgtctcatgggattccatcatatgcagaccatgtctcagcctatgaatatgttcagattcggctctcagcctcttccgcaaagtcaaatgatggcaccaactggcatgaacactggacctttaagtggtggagctgcaactaatgatgctttgagtggcaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

837

Amino Acids

91.79

Weight (kDa)

7.59

Isoelectric Point (pI)

47.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	591
Acc36I	ACCTGC	1 cut(s)	1000
AccB1I	GGYRCC	3 cut(s)	466, 2113, 2443
AccB7I	CCANNNNNTGG	1 cut(s)	180
AccI	GTMKAC	1 cut(s)	563
AciI	CCGC	4 cut(s)	773, 1880, 2174, 2426
AclWI	GGATC	8 cut(s)	518, 1150, 1495, 1511, 1579, 1724, 1915, 1979
AcsI	RAATTY	2 cut(s)	767, 901
AcuI	CTGAAG	4 cut(s)	297, 1953, 2057, 2069
AcvI	CACGTG	1 cut(s)	1925
AfaI	GTAC	4 cut(s)	671, 1297, 1673, 2136
AfiI	CCNNNNNNNGG	6 cut(s)	180, 349, 702, 737, 1855, 2474
AflIII	ACRYGT	1 cut(s)	1922
AgeI	ACCGGT	1 cut(s)	1346
AhlI	ACTAGT	1 cut(s)	982
AjiI	CACGTC	1 cut(s)	2351
AjnI	CCWGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
AjuI	GAANNNNNNNTTGG	6 cut(s)	95, 127, 1726, 1758, 2271, 2303
Alw21I	GWGCWC	1 cut(s)	2004
Alw26I	GTCTC	6 cut(s)	367, 1153, 1951, 2073, 2357, 2388
AlwI	GGATC	8 cut(s)	518, 1150, 1495, 1511, 1579, 1724, 1915, 1979
Ama87I	CYCGRG	2 cut(s)	591, 2214
AoxI	GGCC	4 cut(s)	340, 586, 595, 968
ApeKI	GCWGC	6 cut(s)	218, 1859, 1877, 1928, 2077, 2483
ApoI	RAATTY	2 cut(s)	767, 901
ArsI	GACNNNNNNTTYG	2 cut(s)	1030, 1062
AsiGI	ACCGGT	1 cut(s)	1346
Asp700I	GAANNNNTTC	2 cut(s)	576, 2399
AspLEI	GCGC	3 cut(s)	781, 822, 1897
AspS9I	GGNCC	7 cut(s)	587, 968, 1046, 1664, 2171, 2218, 2465
AsuHPI	GGTGA	7 cut(s)	118, 145, 179, 522, 944, 1311, 1649
AvaI	CYCGRG	2 cut(s)	591, 2214
AvaII	GGWCC	5 cut(s)	1046, 1664, 2171, 2218, 2465
BaeGI	GKGCMC	1 cut(s)	469
BanI	GGYRCC	3 cut(s)	466, 2113, 2443
BanII	GRGCYC	1 cut(s)	2004
BauI	CACGAG	1 cut(s)	609
BbrPI	CACGTG	1 cut(s)	1925
Bbv12I	GWGCWC	1 cut(s)	2004
BbvI	GCAGC	6 cut(s)	205, 1864, 1871, 1915, 2064, 2470
BccI	CCATC	9 cut(s)	242, 308, 780, 1311, 1634, 2092, 2104, 2373, 2434
BcgI	CGANNNNNNTGC	2 cut(s)	2195, 2229
BciT130I	CCWGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
BciVI	GTATCC	2 cut(s)	299, 431
BclI	TGATCA	2 cut(s)	1084, 2230
BcoDI	GTCTC	6 cut(s)	367, 1153, 1951, 2073, 2357, 2388
BcuI	ACTAGT	1 cut(s)	982
BfaI	CTAG	5 cut(s)	428, 983, 1293, 1494, 2225
BfmI	CTRYAG	2 cut(s)	370, 1167
BfuAI	ACCTGC	1 cut(s)	1000
BfuI	GTATCC	2 cut(s)	299, 431
BglI	GCCNNNNNGGC	1 cut(s)	594
BisI	GCNGC	6 cut(s)	219, 1860, 1878, 1929, 2078, 2484
BlsI	GCNGC	6 cut(s)	220, 1861, 1879, 1930, 2079, 2485
Bme1390I	CCNGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
Bme18I	GGWCC	5 cut(s)	1046, 1664, 2171, 2218, 2465
BmeT110I	CYCGRG	2 cut(s)	591, 2214
BmgBI	CACGTC	1 cut(s)	2351
BmgT120I	GGNCC	7 cut(s)	587, 968, 1046, 1664, 2171, 2218, 2465
BmrFI	CCNGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
BmrI	ACTGGG	1 cut(s)	1478
BmuI	ACTGGG	1 cut(s)	1478
BplI	GAGNNNNNCTC	2 cut(s)	806, 838
BpmI	CTGGAG	1 cut(s)	274
BpuEI	CTTGAG	3 cut(s)	525, 833, 1253
BsaAI	YACGTR	1 cut(s)	1925
BsaBI	GATNNNNATC	1 cut(s)	1906
BsaJI	CCNNGG	4 cut(s)	291, 714, 963, 2213
BsaWI	WCCGGW	1 cut(s)	1346
BsaXI	ACNNNNNCTCC	8 cut(s)	315, 345, 1133, 1163, 1909, 1939, 2233, 2263
Bsc4I	CCNNNNNNNGG	6 cut(s)	180, 349, 702, 737, 1855, 2474
Bse118I	RCCGGY	1 cut(s)	1346
Bse1I	ACTGG	8 cut(s)	174, 589, 707, 1473, 1654, 1666, 2455, 2467
Bse3DI	GCAATG	1 cut(s)	1639
Bse8I	GATNNNNATC	1 cut(s)	1906
BseBI	CCWGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
BseDI	CCNNGG	4 cut(s)	291, 714, 963, 2213
BseGI	GGATG	4 cut(s)	791, 1719, 2103, 2115
BseJI	GATNNNNATC	1 cut(s)	1906
BseLI	CCNNNNNNNGG	6 cut(s)	180, 349, 702, 737, 1855, 2474
BseMI	GCAATG	1 cut(s)	1639
BseMII	CTCAG	8 cut(s)	804, 1131, 1596, 1691, 1854, 1962, 2399, 2429
BseNI	ACTGG	8 cut(s)	174, 589, 707, 1473, 1654, 1666, 2455, 2467
BseRI	GAGGAG	4 cut(s)	488, 1368, 1794, 1930
BseSI	GKGCMC	1 cut(s)	469
BseXI	GCAGC	6 cut(s)	205, 1864, 1871, 1915, 2064, 2470
BsgI	GTGCAG	1 cut(s)	42
BshFI	GGCC	4 cut(s)	342, 588, 597, 970
BshNI	GGYRCC	3 cut(s)	466, 2113, 2443
BshTI	ACCGGT	1 cut(s)	1346
BsiHKAI	GWGCWC	1 cut(s)	2004
BsiHKCI	CYCGRG	2 cut(s)	591, 2214
BsiSI	CCGG	1 cut(s)	1347
BslFI	GGGAC	5 cut(s)	212, 1657, 2134, 2184, 2204
BslI	CCNNNNNNNGG	6 cut(s)	180, 349, 702, 737, 1855, 2474
BsmAI	GTCTC	6 cut(s)	367, 1153, 1951, 2073, 2357, 2388
BsmBI	CGTCTC	2 cut(s)	1951, 2357
BsmFI	GGGAC	5 cut(s)	212, 1657, 2134, 2184, 2204
BsmI	GAATGC	2 cut(s)	232, 909
BsnI	GGCC	4 cut(s)	342, 588, 597, 970
BsoBI	CYCGRG	2 cut(s)	591, 2214
Bsp1286I	GDGCHC	2 cut(s)	469, 2004
Bsp1407I	TGTACA	1 cut(s)	1671
BspACI	CCGC	4 cut(s)	773, 1880, 2174, 2426
BspANI	GGCC	4 cut(s)	342, 588, 597, 970
BspCNI	CTCAG	8 cut(s)	805, 1130, 1595, 1692, 1853, 1961, 2398, 2428
BspHI	TCATGA	2 cut(s)	976, 1132
BspMI	ACCTGC	1 cut(s)	1000
BspPI	GGATC	8 cut(s)	518, 1150, 1495, 1511, 1579, 1724, 1915, 1979
BspT107I	GGYRCC	3 cut(s)	466, 2113, 2443
BsrDI	GCAATG	1 cut(s)	1639
BsrFI	RCCGGY	1 cut(s)	1346
BsrGI	TGTACA	1 cut(s)	1671
BsrI	ACTGG	8 cut(s)	174, 589, 707, 1473, 1654, 1666, 2455, 2467
BssAI	RCCGGY	1 cut(s)	1346
BssECI	CCNNGG	4 cut(s)	291, 714, 963, 2213
BssNAI	GTATAC	1 cut(s)	564
BssSI	CACGAG	1 cut(s)	609
BssT1I	CCWWGG	1 cut(s)	963
Bst1107I	GTATAC	1 cut(s)	564
Bst2BI	CACGAG	1 cut(s)	609
Bst2UI	CCWGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
Bst4CI	ACNGT	3 cut(s)	674, 1567, 2245
Bst6I	CTCTTC	5 cut(s)	1260, 1321, 1957, 2076, 2427
BstAUI	TGTACA	1 cut(s)	1671
BstBAI	YACGTR	1 cut(s)	1925
BstC8I	GCNNGC	3 cut(s)	241, 1893, 2178
BstDEI	CTNAG	9 cut(s)	222, 813, 1117, 1582, 1700, 1840, 1948, 2385, 2415
BstENI	CCTNNNNNAGG	1 cut(s)	347
BstF5I	GGATG	4 cut(s)	791, 1719, 2103, 2115
BstHHI	GCGC	3 cut(s)	781, 822, 1897
BstMAI	GTCTC	6 cut(s)	367, 1153, 1951, 2073, 2357, 2388
BstMWI	GCNNNNNNNGC	8 cut(s)	227, 236, 594, 749, 758, 2182, 2191, 2425
BstNI	CCWGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
BstNSI	RCATGY	1 cut(s)	14
BstSCI	CCNGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
BstSFI	CTRYAG	2 cut(s)	370, 1167
BstSLI	GKGCMC	1 cut(s)	469
BstV1I	GCAGC	6 cut(s)	205, 1864, 1871, 1915, 2064, 2470
BstX2I	RGATCY	2 cut(s)	1487, 1516
BstYI	RGATCY	2 cut(s)	1487, 1516
BstZ17I	GTATAC	1 cut(s)	564
BsuI	GTATCC	2 cut(s)	299, 431
BsuRI	GGCC	4 cut(s)	342, 588, 597, 970
BtrI	CACGTC	1 cut(s)	2351
BtsCI	GGATG	4 cut(s)	791, 1719, 2103, 2115
BtsI	GCAGTG	2 cut(s)	25, 1991
BtsIMutI	CAGTG	5 cut(s)	25, 1466, 1991, 2240, 2460
BveI	ACCTGC	1 cut(s)	1000
Cac8I	GCNNGC	3 cut(s)	241, 1893, 2178
CciI	TCATGA	2 cut(s)	976, 1132
CfoI	GCGC	3 cut(s)	781, 822, 1897
Cfr10I	RCCGGY	1 cut(s)	1346
Cfr13I	GGNCC	7 cut(s)	587, 968, 1046, 1664, 2171, 2218, 2465
CseI	GACGC	1 cut(s)	1151
CsiI	ACCWGGT	1 cut(s)	1042
Csp6I	GTAC	4 cut(s)	670, 1296, 1672, 2135
CspAI	ACCGGT	1 cut(s)	1346
CspCI	CAANNNNNGTGG	2 cut(s)	1288, 1323
CviQI	GTAC	4 cut(s)	670, 1296, 1672, 2135
DdeI	CTNAG	9 cut(s)	222, 813, 1117, 1582, 1700, 1840, 1948, 2385, 2415
Eam1104I	CTCTTC	5 cut(s)	1260, 1321, 1957, 2076, 2427
EarI	CTCTTC	5 cut(s)	1260, 1321, 1957, 2076, 2427
Ecl136II	GAGCTC	1 cut(s)	2002
Eco130I	CCWWGG	1 cut(s)	963
Eco147I	AGGCCT	1 cut(s)	342
Eco24I	GRGCYC	1 cut(s)	2004
Eco47I	GGWCC	5 cut(s)	1046, 1664, 2171, 2218, 2465
Eco53kI	GAGCTC	1 cut(s)	2002
Eco57I	CTGAAG	4 cut(s)	297, 1953, 2057, 2069
Eco72I	CACGTG	1 cut(s)	1925
Eco88I	CYCGRG	2 cut(s)	591, 2214
EcoICRI	GAGCTC	1 cut(s)	2002
EcoNI	CCTNNNNNAGG	1 cut(s)	347
EcoO109I	RGGNCCY	2 cut(s)	1046, 2218
EcoRI	GAATTC	1 cut(s)	901
EcoRII	CCWGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
EcoT14I	CCWWGG	1 cut(s)	963
EcoT22I	ATGCAT	2 cut(s)	12, 397
EcoT38I	GRGCYC	1 cut(s)	2004
ErhI	CCWWGG	1 cut(s)	963
Esp3I	CGTCTC	2 cut(s)	1951, 2357
FalI	AAGNNNNNCTT	4 cut(s)	534, 566, 947, 979
FaqI	GGGAC	5 cut(s)	212, 1657, 2134, 2184, 2204
FauI	CCCGC	2 cut(s)	766, 1873
FauNDI	CATATG	1 cut(s)	2370
FbaI	TGATCA	2 cut(s)	1084, 2230
FblI	GTMKAC	1 cut(s)	563
Fnu4HI	GCNGC	6 cut(s)	219, 1860, 1878, 1929, 2078, 2484
FokI	GGATG	4 cut(s)	798, 1726, 2110, 2122
FriOI	GRGCYC	1 cut(s)	2004
Fsp4HI	GCNGC	6 cut(s)	219, 1860, 1878, 1929, 2078, 2484
FspBI	CTAG	5 cut(s)	428, 983, 1293, 1494, 2225
GlaI	GCGC	3 cut(s)	780, 821, 1896
GluI	GCNGC	6 cut(s)	219, 1860, 1878, 1929, 2078, 2484
GsuI	CTGGAG	1 cut(s)	274
HaeIII	GGCC	4 cut(s)	342, 588, 597, 970
HapII	CCGG	1 cut(s)	1347
HgaI	GACGC	1 cut(s)	1151
HhaI	GCGC	3 cut(s)	781, 822, 1897
Hin6I	GCGC	3 cut(s)	779, 820, 1895
HinP1I	GCGC	3 cut(s)	779, 820, 1895
HindIII	AAGCTT	1 cut(s)	140
HpaII	CCGG	1 cut(s)	1347
HphI	GGTGA	7 cut(s)	118, 145, 179, 522, 944, 1311, 1649
Hpy166II	GTNNAC	1 cut(s)	564
Hpy8I	GTNNAC	1 cut(s)	564
HpyAV	CCTTC	8 cut(s)	97, 124, 208, 271, 343, 1227, 1981, 2196
HpyCH4III	ACNGT	3 cut(s)	674, 1567, 2245
HpyCH4IV	ACGT	2 cut(s)	1924, 2350
HpyF10VI	GCNNNNNNNGC	8 cut(s)	227, 236, 594, 749, 758, 2182, 2191, 2425
HpyF3I	CTNAG	9 cut(s)	222, 813, 1117, 1582, 1700, 1840, 1948, 2385, 2415
HpySE526I	ACGT	2 cut(s)	1924, 2350
HspAI	GCGC	3 cut(s)	779, 820, 1895
KflI	GGGWCCC	1 cut(s)	2218
Ksp22I	TGATCA	2 cut(s)	1084, 2230
LmnI	GCTCC	6 cut(s)	152, 293, 633, 740, 2338, 2480
Lsp1109I	GCAGC	6 cut(s)	205, 1864, 1871, 1915, 2064, 2470
MabI	ACCWGGT	1 cut(s)	1042
MaeI	CTAG	5 cut(s)	428, 983, 1293, 1494, 2225
MaeII	ACGT	2 cut(s)	1924, 2350
MaeIII	GTNAC	7 cut(s)	41, 133, 167, 497, 808, 1577, 2245
MboII	GAAGA	9 cut(s)	220, 1184, 1277, 1308, 1482, 1740, 1974, 2063, 2414
MfeI	CAATTG	1 cut(s)	2052
MflI	RGATCY	2 cut(s)	1487, 1516
MhlI	GDGCHC	2 cut(s)	469, 2004
MlyI	GAGTC	5 cut(s)	69, 1070, 1627, 1832, 2242
MmeI	TCCRAC	5 cut(s)	605, 655, 1427, 1549, 1757
Mph1103I	ATGCAT	2 cut(s)	12, 397
MroXI	GAANNNNTTC	2 cut(s)	576, 2399
MseI	TTAA	9 cut(s)	54, 486, 642, 698, 840, 944, 1278, 1446, 2471
MslI	CAYNNNNRTG	1 cut(s)	2243
MspA1I	CMGCKG	3 cut(s)	1862, 1877, 2077
MspI	CCGG	1 cut(s)	1347
MspR9I	CCNGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
MunI	CAATTG	1 cut(s)	2052
Mva1269I	GAATGC	2 cut(s)	232, 909
MvaI	CCWGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
MwoI	GCNNNNNNNGC	8 cut(s)	227, 236, 594, 749, 758, 2182, 2191, 2425
NdeI	CATATG	1 cut(s)	2370
NmuCI	GTSAC	5 cut(s)	41, 133, 167, 497, 2245
NsiI	ATGCAT	2 cut(s)	12, 397
NspI	RCATGY	1 cut(s)	14
PaeR7I	CTCGAG	1 cut(s)	591
PagI	TCATGA	2 cut(s)	976, 1132
PceI	AGGCCT	1 cut(s)	342
PctI	GAATGC	2 cut(s)	232, 909
PdmI	GAANNNNTTC	2 cut(s)	576, 2399
PfeI	GAWTC	9 cut(s)	648, 1129, 1175, 1226, 1531, 1871, 2293, 2361, 2406
PflFI	GACNNNGTC	3 cut(s)	722, 1145, 2380
PflMI	CCANNNNNTGG	1 cut(s)	180
PfoI	TCCNGGA	2 cut(s)	736, 2128
PinAI	ACCGGT	1 cut(s)	1346
PkrI	GCNGC	6 cut(s)	220, 1861, 1879, 1930, 2079, 2485
PleI	GAGTC	5 cut(s)	68, 1069, 1626, 1832, 2242
PmaCI	CACGTG	1 cut(s)	1925
PmlI	CACGTG	1 cut(s)	1925
PpsI	GAGTC	5 cut(s)	68, 1069, 1626, 1832, 2242
Ppu21I	YACGTR	1 cut(s)	1925
PpuMI	RGGWCCY	2 cut(s)	1046, 2218
Psp124BI	GAGCTC	1 cut(s)	2004
Psp5II	RGGWCCY	2 cut(s)	1046, 2218
Psp6I	CCWGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
PspCI	CACGTG	1 cut(s)	1925
PspGI	CCWGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
PspPI	GGNCC	7 cut(s)	587, 968, 1046, 1664, 2171, 2218, 2465
PspPPI	RGGWCCY	2 cut(s)	1046, 2218
PspXI	VCTCGAGB	1 cut(s)	591
PsuI	RGATCY	2 cut(s)	1487, 1516
PsyI	GACNNNGTC	3 cut(s)	722, 1145, 2380
PvuII	CAGCTG	3 cut(s)	1862, 1877, 2077
RsaI	GTAC	4 cut(s)	671, 1297, 1673, 2136
RsaNI	GTAC	4 cut(s)	670, 1296, 1672, 2135
RseI	CAYNNNNRTG	1 cut(s)	2243
SacI	GAGCTC	1 cut(s)	2004
SaqAI	TTAA	9 cut(s)	54, 486, 642, 698, 840, 944, 1278, 1446, 2471
SatI	GCNGC	6 cut(s)	219, 1860, 1878, 1929, 2078, 2484
Sau96I	GGNCC	7 cut(s)	587, 968, 1046, 1664, 2171, 2218, 2465
SchI	GAGTC	5 cut(s)	69, 1070, 1627, 1832, 2242
ScrFI	CCNGG	7 cut(s)	292, 716, 738, 1044, 1521, 2130, 2264
SduI	GDGCHC	2 cut(s)	469, 2004
SexAI	ACCWGGT	1 cut(s)	1042
SfcI	CTRYAG	2 cut(s)	370, 1167
SfiI	GGCCNNNNNGGCC	1 cut(s)	594
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	5 cut(s)	1046, 1664, 2171, 2218, 2465
SlaI	CTCGAG	1 cut(s)	591
SmiMI	CAYNNNNRTG	1 cut(s)	2243
SmlI	CTYRAG	4 cut(s)	540, 591, 848, 1232
SmoI	CTYRAG	4 cut(s)	540, 591, 848, 1232
SpeI	ACTAGT	1 cut(s)	982
SseBI	AGGCCT	1 cut(s)	342
SsiI	CCGC	4 cut(s)	773, 1880, 2174, 2426
SspI	AATATT	1 cut(s)	577
SspMI	CTAG	5 cut(s)	428, 983, 1293, 1494, 2225
SstI	GAGCTC	1 cut(s)	2004
StuI	AGGCCT	1 cut(s)	342
StyD4I	CCNGG	7 cut(s)	290, 714, 736, 1042, 1519, 2128, 2262
StyI	CCWWGG	1 cut(s)	963
TaaI	ACNGT	3 cut(s)	674, 1567, 2245
TaiI	ACGT	2 cut(s)	1927, 2353
TaqI	TCGA	5 cut(s)	592, 1036, 1064, 1574, 1913
TatI	WGTACW	3 cut(s)	669, 1671, 2134
TfiI	GAWTC	9 cut(s)	648, 1129, 1175, 1226, 1531, 1871, 2293, 2361, 2406
Tru1I	TTAA	9 cut(s)	54, 486, 642, 698, 840, 944, 1278, 1446, 2471
Tru9I	TTAA	9 cut(s)	54, 486, 642, 698, 840, 944, 1278, 1446, 2471
TscAI	CASTG	5 cut(s)	25, 1473, 1998, 2240, 2467
TseFI	GTSAC	5 cut(s)	41, 133, 167, 497, 2245
TseI	GCWGC	6 cut(s)	218, 1859, 1877, 1928, 2077, 2483
Tsp45I	GTSAC	5 cut(s)	41, 133, 167, 497, 2245
TspDTI	ATGAA	9 cut(s)	227, 819, 914, 993, 1121, 1734, 2000, 2408, 2471
TspGWI	ACGGA	1 cut(s)	495
TspRI	CASTG	5 cut(s)	25, 1473, 1998, 2240, 2467
Tth111I	GACNNNGTC	3 cut(s)	722, 1145, 2380
Van91I	CCANNNNNTGG	1 cut(s)	180
VpaK11BI	GGWCC	5 cut(s)	1046, 1664, 2171, 2218, 2465
XagI	CCTNNNNNAGG	1 cut(s)	347
XapI	RAATTY	2 cut(s)	767, 901
XbaI	TCTAGA	1 cut(s)	1493
XceI	RCATGY	1 cut(s)	14
XhoI	CTCGAG	1 cut(s)	591
XmiI	GTMKAC	1 cut(s)	563
XmnI	GAANNNNTTC	2 cut(s)	576, 2399
XspI	CTAG	5 cut(s)	428, 983, 1293, 1494, 2225
Zsp2I	ATGCAT	2 cut(s)	12, 397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.