Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0001667

Physical Location & Seq

Genomic Coordinates Reverse (-)

4865920 .. 4867901

Gene Structure 1982 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g06630.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGAGACAAGTTCAGAAACATGATCAGCAATCAATAAGCTCTGGGGGGTTGTATGGGAATTCAAGTAATCCGATTCAAGATGATGACACCGTTTCCCTTATCCACTACCCGCTTGAGGATTCTTTCGACAAAGAGTTTTGTTCCCATTTTTTCTCTGAATTCCCTTCCTGTGATCCAATTGAGCTTGACAAACCAATCAAACAGTTTGAGGGAGAGAAGGTTGTGAAGTTTGATGCTTCTGACACCGCGCGTCTTGTTTCCAACTCACCGCGGCCTAATGGCAAGTCCTCTGCTGGTGTGGAATACGCTGCAAATCGAATGCCTCCTCCAAGATATCAATACATTAATTCAACTGATCAGCAGAACCAAAATCAAGGAGGCGTGGGGAAAATAGTTAATTTTTCACAATTTGCAACCCCGGGAAGGGTTTCAGCAGGATCTTCTAGAGGACAGTTAGGAGGGAAAGAGTCCGGAAATTTAGCTCAAGCGGAGGTTAGGGAGTGTTCTGTGATGACAGTTGGTTCGAGTTACGTTGGTAGCAACCAAGTTCTAAATGACCTTGATGTGAGCAGGGCTTCAAGCAATTGTGATGGAACTACTGGTTTATCGGCTGGACATTTCTACGACAACGTTCATAAGATAATGCCTCAGAGCGAGACAGGGAAAACGGATACACTTGATCCAACGCTTACTTCGTCTTCTGGCGGTTCTGGTAGTAGTTTTGGCAGAGAAGGAAACCAGTCTAATGTTGTCAATAGCAACAAGAGAAAGGGTAGAGAGGCAGCGGACTCGGAGTGCCAAAGTGAGGCTGCTGAACTTGAATCAGCTTCAGCTGCGAGAAGTAAGTCAGCGCATCGATCAGGATCGACCAGGAGGAGTCGTGCTGCTGAAGTCCATAACCTCTCAGAAAGGAAACGGAGAGATCGGATTAACGAGAAAATGAAAGCATTGCAAGAGCTTATACCTCATTCTAACAAGACAGATAAAGCATCAATGTTAGATGAGGCAATTGAGTACTTGAAGTCACTTCAGATGCAACTGCAGGTAATGTGGATGGGAAGCGGGATGGCACCAATGATGTTTCCGGGCGTGCAGCACTATATTTCCCGAATGGGAATGGGAATGGGAATGGGAATGGGACCGCCGGCCTTGCCTTCTATGCAAAATCCGATGCATTTACCTAGGCACCCGCTCGTTGATCAGTGCATGAATGTGGCTCCAGCAGCAAACCAGACTGTAATGTGCCAACCACCGGTCTTGAATCCCATTGATTACCACAACCAGATGCAAAATCCCTCTTTTCAGGAACAATACGCGCGTCTCATGAACTTCCATCACATGCAGACTATGTCTCAGCCAATGAATATGTTCAGATTTGGCTCCCAACCTCTACAACAGAATAAGATGATGGCACCAAATGGTTTCAGCAGTGGACCTTTCGGTGGAGGAGCTGCAACTAATGACCCTTCAAGTGGAAAAATGAGTAAGTCACTTGAAAGCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009058 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009642 GO:0009645 GO:0009692 GO:0009693 GO:0009704 GO:0009791 GO:0009889 GO:0009966 GO:0009987 GO:0010017 GO:0010114 GO:0010161 GO:0010244 GO:0010468 GO:0010556 GO:0010600 GO:0010646 GO:0010817 GO:0010928 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043449 GO:0043450 GO:0044237 GO:0044249 GO:0044424 GO:0044464 GO:0046885 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0065008 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071491 GO:0071704 GO:0080090 GO:0090354 GO:0097159 GO:0104004 GO:0140110 GO:1900673 GO:1900674 GO:1901363 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

HLH

Protein Analysis

502

Amino Acids

54.64

Weight (kDa)

6.92

Isoelectric Point (pI)

56.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001667)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT2G43010 AT3G59060 AT3G59060 AT3G59060 AT3G59060
fragaria_vesca	FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940 FvH4_6g38940
malus_domestica	MD09G1146000.v1.1 MD17G1132600.v1.1
prunus_persica	Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1 Prupe.3G179800_v2.0.a1
pyrus_communis	pycom09g06630 pycom17g12610
rosa_chinensis	RchiOBHm_Chr2g0152511
rosa_laevigata	RLG00000020642
rosa_multiflora	Rmu_sc0005366.1_g000001 Rmu_sc0027733.1_g000001 Rmu_sc0027737.1_g000001 Rmu_sc0034754.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095640
rosa_rugosa	Rorug02G0434000 Rorug02G0434100 Rorug02G0434200
rosa_samantha	Rh2AG495400 Rh2BG507300 Rh2CG481500 Rh2CG481600 Rh2DG518600
rosa_wichuraiana	Rw2G040760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1033
AccB1I	GGYRCC	3 cut(s)	1069, 1185, 1411
AccBSI	CCGCTC	1 cut(s)	1192
AccII	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
AccIII	TCCGGA	1 cut(s)	470
AclI	AACGTT	1 cut(s)	630
AclWI	GGATC	4 cut(s)	167, 445, 674, 871
AcsI	RAATTY	3 cut(s)	58, 158, 475
AcuI	CTGAAG	3 cut(s)	813, 909, 1013
AfaI	GTAC	1 cut(s)	1016
AfiI	CCNNNNNNNGG	7 cut(s)	115, 423, 424, 805, 1252, 1442, 1472
AgeI	ACCGGT	1 cut(s)	1252
AgsI	TTSAA	9 cut(s)	63, 77, 351, 579, 821, 1021, 1261, 1470, 1496
AjnI	CCWGG	1 cut(s)	869
AjuI	GAANNNNNNNTTGG	2 cut(s)	676, 708
AluBI	AGCT	7 cut(s)	39, 184, 482, 827, 833, 958, 1451
AluI	AGCT	7 cut(s)	39, 184, 482, 827, 833, 958, 1451
Alw26I	GTCTC	3 cut(s)	650, 1325, 1356
AlwI	GGATC	4 cut(s)	167, 445, 674, 871
Ama87I	CYCGRG	1 cut(s)	418
Aor13HI	TCCGGA	1 cut(s)	470
AoxI	GGCC	2 cut(s)	272, 1146
ApeKI	GCWGC	8 cut(s)	308, 782, 809, 833, 884, 1093, 1223, 1451
ApoI	RAATTY	3 cut(s)	58, 158, 475
ArsI	GACNNNNNNTTYG	2 cut(s)	505, 537
AseI	ATTAAT	1 cut(s)	345
AsiGI	ACCGGT	1 cut(s)	1252
Asp700I	GAANNNNTTC	2 cut(s)	427, 1367
AspA2I	CCTAGG	1 cut(s)	1181
AspLEI	GCGC	3 cut(s)	250, 853, 1318
AspS9I	GGNCC	2 cut(s)	1139, 1433
AsuC2I	CCSGG	3 cut(s)	419, 420, 1086
AsuHPI	GGTGA	1 cut(s)	258
AvaI	CYCGRG	1 cut(s)	418
AvaII	GGWCC	2 cut(s)	1139, 1433
AvrII	CCTAGG	1 cut(s)	1181
BanI	GGYRCC	3 cut(s)	1069, 1185, 1411
BbsI	GAAGAC	1 cut(s)	690
BbvI	GCAGC	8 cut(s)	295, 794, 796, 820, 871, 1105, 1235, 1438
BccI	CCATC	5 cut(s)	584, 1048, 1060, 1341, 1402
BcgI	CGANNNNNNTGC	2 cut(s)	771, 805
BciT130I	CCWGG	1 cut(s)	871
BciVI	GTATCC	1 cut(s)	664
BclI	TGATCA	3 cut(s)	22, 355, 1198
BcnI	CCSGG	3 cut(s)	419, 420, 1086
BcoDI	GTCTC	3 cut(s)	650, 1325, 1356
BfaI	CTAG	2 cut(s)	444, 1182
BfmI	CTRYAG	1 cut(s)	1040
BfuAI	ACCTGC	1 cut(s)	1033
BfuI	GTATCC	1 cut(s)	664
BisI	GCNGC	9 cut(s)	272, 309, 783, 810, 834, 885, 1094, 1224, 1452
BlnI	CCTAGG	1 cut(s)	1181
BlsI	GCNGC	9 cut(s)	273, 310, 784, 811, 835, 886, 1095, 1225, 1453
BmcAI	AGTACT	1 cut(s)	1016
Bme1390I	CCNGG	4 cut(s)	419, 420, 871, 1086
Bme18I	GGWCC	2 cut(s)	1139, 1433
BmeT110I	CYCGRG	1 cut(s)	418
BmgT120I	GGNCC	2 cut(s)	1139, 1433
BmiI	GGNNCC	6 cut(s)	1071, 1140, 1187, 1218, 1381, 1413
BmrFI	CCNGG	4 cut(s)	419, 420, 871, 1086
BmsI	GCATC	6 cut(s)	223, 862, 998, 1023, 1161, 1275
BpiI	GAAGAC	1 cut(s)	690
BpmI	CTGGAG	1 cut(s)	1203
BpuEI	CTTGAG	2 cut(s)	134, 468
BpuMI	CCSGG	3 cut(s)	419, 420, 1086
Bsa29I	ATCGAT	1 cut(s)	856
BsaBI	GATNNNNATC	1 cut(s)	862
BsaJI	CCNNGG	4 cut(s)	269, 417, 418, 1181
BsaWI	WCCGGW	2 cut(s)	470, 1252
BsaXI	ACNNNNNCTCC	4 cut(s)	204, 234, 865, 895
Bsc4I	CCNNNNNNNGG	7 cut(s)	115, 423, 424, 805, 1252, 1442, 1472
Bse118I	RCCGGY	2 cut(s)	1144, 1252
Bse1I	ACTGG	2 cut(s)	604, 739
Bse3DI	GCAATG	1 cut(s)	947
Bse8I	GATNNNNATC	1 cut(s)	862
BseAI	TCCGGA	1 cut(s)	470
BseBI	CCWGG	1 cut(s)	871
BseCI	ATCGAT	1 cut(s)	856
BseDI	CCNNGG	4 cut(s)	269, 417, 418, 1181
BseGI	GGATG	2 cut(s)	1059, 1071
BseJI	GATNNNNATC	1 cut(s)	862
BseLI	CCNNNNNNNGG	7 cut(s)	115, 423, 424, 805, 1252, 1442, 1472
BseMI	GCAATG	1 cut(s)	947
BseMII	CTCAG	3 cut(s)	662, 918, 1367
BseNI	ACTGG	2 cut(s)	604, 739
BseRI	GAGGAG	3 cut(s)	315, 889, 1461
BseXI	GCAGC	8 cut(s)	295, 794, 796, 820, 871, 1105, 1235, 1438
BsgI	GTGCAG	1 cut(s)	1112
Bsh1236I	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
BshFI	GGCC	2 cut(s)	274, 1148
BshNI	GGYRCC	3 cut(s)	1069, 1185, 1411
BshTI	ACCGGT	1 cut(s)	1252
BshVI	ATCGAT	1 cut(s)	856
BsiHKCI	CYCGRG	1 cut(s)	418
BsiSI	CCGG	5 cut(s)	419, 471, 1085, 1145, 1253
BslFI	GGGAC	1 cut(s)	1152
BslI	CCNNNNNNNGG	7 cut(s)	115, 423, 424, 805, 1252, 1442, 1472
BsmAI	GTCTC	3 cut(s)	650, 1325, 1356
BsmBI	CGTCTC	1 cut(s)	1325
BsmFI	GGGAC	1 cut(s)	1152
BsmI	GAATGC	1 cut(s)	324
BsnI	GGCC	2 cut(s)	274, 1148
BsoBI	CYCGRG	1 cut(s)	418
Bsp13I	TCCGGA	1 cut(s)	470
Bsp143I	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
BspANI	GGCC	2 cut(s)	274, 1148
BspCNI	CTCAG	3 cut(s)	661, 917, 1366
BspDI	ATCGAT	1 cut(s)	856
BspEI	TCCGGA	1 cut(s)	470
BspFNI	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
BspHI	TCATGA	1 cut(s)	1323
BspLI	GGNNCC	6 cut(s)	1071, 1140, 1187, 1218, 1381, 1413
BspMAI	CTGCAG	1 cut(s)	1044
BspMI	ACCTGC	1 cut(s)	1033
BspPI	GGATC	4 cut(s)	167, 445, 674, 871
BspT107I	GGYRCC	3 cut(s)	1069, 1185, 1411
BsrBI	CCGCTC	1 cut(s)	1192
BsrDI	GCAATG	1 cut(s)	947
BsrFI	RCCGGY	2 cut(s)	1144, 1252
BsrI	ACTGG	2 cut(s)	604, 739
BssAI	RCCGGY	2 cut(s)	1144, 1252
BssECI	CCNNGG	4 cut(s)	269, 417, 418, 1181
BssMI	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
BssT1I	CCWWGG	1 cut(s)	1181
Bst2UI	CCWGG	1 cut(s)	871
Bst4CI	ACNGT	5 cut(s)	91, 204, 453, 517, 1237
BstC8I	GCNNGC	2 cut(s)	1091, 1146
BstDEI	CTNAG	3 cut(s)	648, 904, 1353
BstDSI	CCRYGG	1 cut(s)	269
BstF5I	GGATG	2 cut(s)	1059, 1071
BstFNI	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
BstHHI	GCGC	3 cut(s)	250, 853, 1318
BstKTI	GATC	9 cut(s)	25, 175, 358, 440, 682, 860, 866, 925, 1201
BstMAI	GTCTC	3 cut(s)	650, 1325, 1356
BstMBI	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
BstMWI	GCNNNNNNNGC	4 cut(s)	833, 1150, 1159, 1223
BstNI	CCWGG	1 cut(s)	871
BstNSI	RCATGY	1 cut(s)	1342
BstSCI	CCNGG	4 cut(s)	417, 418, 869, 1084
BstSFI	CTRYAG	1 cut(s)	1040
BstUI	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
BstV1I	GCAGC	8 cut(s)	295, 794, 796, 820, 871, 1105, 1235, 1438
BstV2I	GAAGAC	1 cut(s)	690
BstX2I	RGATCY	1 cut(s)	437
BstYI	RGATCY	1 cut(s)	437
Bsu15I	ATCGAT	1 cut(s)	856
BsuI	GTATCC	1 cut(s)	664
BsuRI	GGCC	2 cut(s)	274, 1148
BsuTUI	ATCGAT	1 cut(s)	856
BtgI	CCRYGG	1 cut(s)	269
BtsCI	GGATG	2 cut(s)	1059, 1071
BtsI	GCAGTG	1 cut(s)	1435
BtsIMutI	CAGTG	2 cut(s)	1208, 1435
BveI	ACCTGC	1 cut(s)	1033
Cac8I	GCNNGC	2 cut(s)	1091, 1146
CciI	TCATGA	1 cut(s)	1323
CfoI	GCGC	3 cut(s)	250, 853, 1318
Cfr10I	RCCGGY	2 cut(s)	1144, 1252
Cfr13I	GGNCC	2 cut(s)	1139, 1433
Cfr42I	CCGCGG	1 cut(s)	272
Cfr9I	CCCGGG	1 cut(s)	418
ClaI	ATCGAT	1 cut(s)	856
CseI	GACGC	2 cut(s)	239, 1307
Csp6I	GTAC	1 cut(s)	1015
CspAI	ACCGGT	1 cut(s)	1252
CspCI	CAANNNNNGTGG	2 cut(s)	1239, 1274
CviAII	CATG	4 cut(s)	20, 1207, 1324, 1339
CviQI	GTAC	1 cut(s)	1015
DdeI	CTNAG	3 cut(s)	648, 904, 1353
DpnI	GATC	9 cut(s)	24, 174, 357, 439, 681, 859, 865, 924, 1200
DpnII	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
Eco130I	CCWWGG	1 cut(s)	1181
Eco32I	GATATC	1 cut(s)	335
Eco47I	GGWCC	2 cut(s)	1139, 1433
Eco57I	CTGAAG	3 cut(s)	813, 909, 1013
Eco88I	CYCGRG	1 cut(s)	418
EcoRI	GAATTC	2 cut(s)	58, 158
EcoRII	CCWGG	1 cut(s)	869
EcoRV	GATATC	1 cut(s)	335
EcoT14I	CCWWGG	1 cut(s)	1181
EcoT22I	ATGCAT	1 cut(s)	1176
ErhI	CCWWGG	1 cut(s)	1181
Esp3I	CGTCTC	1 cut(s)	1325
FaeI	CATG	4 cut(s)	23, 1210, 1327, 1342
FaqI	GGGAC	1 cut(s)	1152
FatI	CATG	4 cut(s)	19, 1206, 1323, 1338
FauI	CCCGC	3 cut(s)	117, 1055, 1197
FbaI	TGATCA	3 cut(s)	22, 355, 1198
Fnu4HI	GCNGC	9 cut(s)	272, 309, 783, 810, 834, 885, 1094, 1224, 1452
FokI	GGATG	2 cut(s)	1066, 1078
Fsp4HI	GCNGC	9 cut(s)	272, 309, 783, 810, 834, 885, 1094, 1224, 1452
FspBI	CTAG	2 cut(s)	444, 1182
GlaI	GCGC	3 cut(s)	249, 852, 1317
GluI	GCNGC	9 cut(s)	272, 309, 783, 810, 834, 885, 1094, 1224, 1452
GsuI	CTGGAG	1 cut(s)	1203
HaeIII	GGCC	2 cut(s)	274, 1148
HapII	CCGG	5 cut(s)	419, 471, 1085, 1145, 1253
HgaI	GACGC	2 cut(s)	239, 1307
HhaI	GCGC	3 cut(s)	250, 853, 1318
Hin1II	CATG	4 cut(s)	23, 1210, 1327, 1342
Hin6I	GCGC	3 cut(s)	248, 851, 1316
HinP1I	GCGC	3 cut(s)	248, 851, 1316
HinfI	GANTC	7 cut(s)	73, 119, 467, 788, 821, 877, 1261
HpaII	CCGG	5 cut(s)	419, 471, 1085, 1145, 1253
HphI	GGTGA	1 cut(s)	258
Hpy166II	GTNNAC	1 cut(s)	1433
Hpy188III	TCNNGA	8 cut(s)	77, 444, 471, 861, 1107, 1258, 1304, 1324
Hpy8I	GTNNAC	1 cut(s)	1433
HpyAV	CCTTC	6 cut(s)	174, 211, 417, 725, 1164, 1476
HpyCH4III	ACNGT	5 cut(s)	91, 204, 453, 517, 1237
HpyCH4IV	ACGT	2 cut(s)	531, 630
HpyF10VI	GCNNNNNNNGC	4 cut(s)	833, 1150, 1159, 1223
HpyF3I	CTNAG	3 cut(s)	648, 904, 1353
HpySE526I	ACGT	2 cut(s)	531, 630
Hsp92II	CATG	4 cut(s)	23, 1210, 1327, 1342
HspAI	GCGC	3 cut(s)	248, 851, 1316
Kpn2I	TCCGGA	1 cut(s)	470
KroI	GCCGGC	1 cut(s)	1144
KroNI	GCCGGC	1 cut(s)	1146
Ksp22I	TGATCA	3 cut(s)	22, 355, 1198
KspI	CCGCGG	1 cut(s)	272
Kzo9I	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
LmnI	GCTCC	3 cut(s)	1222, 1385, 1448
Lsp1109I	GCAGC	8 cut(s)	295, 794, 796, 820, 871, 1105, 1235, 1438
LweI	GCATC	6 cut(s)	223, 862, 998, 1023, 1161, 1275
MaeI	CTAG	2 cut(s)	444, 1182
MaeII	ACGT	2 cut(s)	531, 630
MaeIII	GTNAC	3 cut(s)	527, 1023, 1488
MalI	GATC	9 cut(s)	24, 174, 357, 439, 681, 859, 865, 924, 1200
MbiI	CCGCTC	1 cut(s)	1192
MboI	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
MboII	GAAGA	2 cut(s)	432, 690
MfeI	CAATTG	3 cut(s)	177, 583, 1008
MflI	RGATCY	1 cut(s)	437
MluCI	AATT	9 cut(s)	58, 158, 177, 346, 397, 407, 475, 583, 1008
MlyI	GAGTC	3 cut(s)	476, 782, 886
MmeI	TCCRAC	2 cut(s)	285, 707
Mph1103I	ATGCAT	1 cut(s)	1176
MroI	TCCGGA	1 cut(s)	470
MroNI	GCCGGC	1 cut(s)	1144
MroXI	GAANNNNTTC	2 cut(s)	427, 1367
MseI	TTAA	4 cut(s)	345, 396, 930, 1504
MslI	CAYNNNNRTG	1 cut(s)	1211
MspA1I	CMGCKG	3 cut(s)	271, 785, 833
MspI	CCGG	5 cut(s)	419, 471, 1085, 1145, 1253
MspR9I	CCNGG	4 cut(s)	419, 420, 871, 1086
MunI	CAATTG	3 cut(s)	177, 583, 1008
Mva1269I	GAATGC	1 cut(s)	324
MvaI	CCWGG	1 cut(s)	871
MvnI	CGCG	5 cut(s)	248, 250, 271, 1316, 1318
MwoI	GCNNNNNNNGC	4 cut(s)	833, 1150, 1159, 1223
NaeI	GCCGGC	1 cut(s)	1146
NciI	CCSGG	3 cut(s)	419, 420, 1086
NdeII	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
NgoMIV	GCCGGC	1 cut(s)	1144
NlaIII	CATG	4 cut(s)	23, 1210, 1327, 1342
NlaIV	GGNNCC	6 cut(s)	1071, 1140, 1187, 1218, 1381, 1413
NmuCI	GTSAC	2 cut(s)	1023, 1488
NsiI	ATGCAT	1 cut(s)	1176
NspI	RCATGY	1 cut(s)	1342
PagI	TCATGA	1 cut(s)	1323
PcsI	WCGNNNNNNNCGW	1 cut(s)	692
PctI	GAATGC	1 cut(s)	324
PdiI	GCCGGC	1 cut(s)	1146
PdmI	GAANNNNTTC	2 cut(s)	427, 1367
PfeI	GAWTC	4 cut(s)	73, 119, 821, 1261
PflFI	GACNNNGTC	1 cut(s)	1348
PinAI	ACCGGT	1 cut(s)	1252
PkrI	GCNGC	9 cut(s)	273, 310, 784, 811, 835, 886, 1095, 1225, 1453
PleI	GAGTC	3 cut(s)	475, 782, 885
PpsI	GAGTC	3 cut(s)	475, 782, 885
PshBI	ATTAAT	1 cut(s)	345
Psp1406I	AACGTT	1 cut(s)	630
Psp6I	CCWGG	1 cut(s)	869
PspGI	CCWGG	1 cut(s)	869
PspN4I	GGNNCC	6 cut(s)	1071, 1140, 1187, 1218, 1381, 1413
PspPI	GGNCC	2 cut(s)	1139, 1433
PstI	CTGCAG	1 cut(s)	1044
PsuI	RGATCY	1 cut(s)	437
PsyI	GACNNNGTC	1 cut(s)	1348
PvuII	CAGCTG	1 cut(s)	833
RsaI	GTAC	1 cut(s)	1016
RsaNI	GTAC	1 cut(s)	1015
RseI	CAYNNNNRTG	1 cut(s)	1211
SacII	CCGCGG	1 cut(s)	272
SaqAI	TTAA	4 cut(s)	345, 396, 930, 1504
SatI	GCNGC	9 cut(s)	272, 309, 783, 810, 834, 885, 1094, 1224, 1452
Sau3AI	GATC	9 cut(s)	22, 172, 355, 437, 679, 857, 863, 922, 1198
Sau96I	GGNCC	2 cut(s)	1139, 1433
ScaI	AGTACT	1 cut(s)	1016
SchI	GAGTC	3 cut(s)	476, 782, 886
ScrFI	CCNGG	4 cut(s)	419, 420, 871, 1086
SfaNI	GCATC	6 cut(s)	223, 862, 998, 1023, 1161, 1275
SfcI	CTRYAG	1 cut(s)	1040
Sfr303I	CCGCGG	1 cut(s)	272
SgrBI	CCGCGG	1 cut(s)	272
SinI	GGWCC	2 cut(s)	1139, 1433
SmaI	CCCGGG	1 cut(s)	420
SmiMI	CAYNNNNRTG	1 cut(s)	1211
SmlI	CTYRAG	2 cut(s)	113, 483
SmoI	CTYRAG	2 cut(s)	113, 483
Sse9I	AATT	9 cut(s)	58, 158, 177, 346, 397, 407, 475, 583, 1008
SspMI	CTAG	2 cut(s)	444, 1182
StyD4I	CCNGG	4 cut(s)	417, 418, 869, 1084
StyI	CCWWGG	1 cut(s)	1181
TaaI	ACNGT	5 cut(s)	91, 204, 453, 517, 1237
TaiI	ACGT	2 cut(s)	534, 633
TaqI	TCGA	5 cut(s)	126, 316, 524, 856, 866
TasI	AATT	9 cut(s)	58, 158, 177, 346, 397, 407, 475, 583, 1008
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	1 cut(s)	274
TfiI	GAWTC	4 cut(s)	73, 119, 821, 1261
Tru1I	TTAA	4 cut(s)	345, 396, 930, 1504
Tru9I	TTAA	4 cut(s)	345, 396, 930, 1504
TscAI	CASTG	2 cut(s)	1208, 1435
TseFI	GTSAC	2 cut(s)	1023, 1488
TseI	GCWGC	8 cut(s)	308, 782, 809, 833, 884, 1093, 1223, 1451
Tsp45I	GTSAC	2 cut(s)	1023, 1488
TspDTI	ATGAA	5 cut(s)	623, 956, 1223, 1340, 1376
TspGWI	ACGGA	2 cut(s)	683, 931
TspMI	CCCGGG	1 cut(s)	418
TspRI	CASTG	2 cut(s)	1208, 1435
Tth111I	GACNNNGTC	1 cut(s)	1348
VpaK11BI	GGWCC	2 cut(s)	1139, 1433
VspI	ATTAAT	1 cut(s)	345
XapI	RAATTY	3 cut(s)	58, 158, 475
XbaI	TCTAGA	1 cut(s)	443
XceI	RCATGY	1 cut(s)	1342
XmaI	CCCGGG	1 cut(s)	418
XmaJI	CCTAGG	1 cut(s)	1181
XmnI	GAANNNNTTC	2 cut(s)	427, 1367
XspI	CTAG	2 cut(s)	444, 1182
ZrmI	AGTACT	1 cut(s)	1016
Zsp2I	ATGCAT	1 cut(s)	1176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.