MD17G1235600.v1.1

Double-stranded RNA-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001836
Physical Location & Seq
Forward (+)
28460400 .. 28464975
4576 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1235600.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGTTCAAGTCGAGGCTGCAGGAGCTCTGCCAGCAGAGGAAATGGCGGTTGCCGGAGTACAACACCACCAAGGTTGGCCTCGACCACATCCCTTGCTTCTCCGCCACCGTTACAATCAATGGCTTCGACTTCCACACAGTGGATACCTTTAGATCCTCCAAAGAAGCCCAAAACGACGCCGCTAAACACGCCTTCGACCACTTCTCTGATCATCCGCAACCCAAACCCAGGAATCCCATTCCCGTCCCTTCCTCTTTCCCTCAACCTTGTCTTCCCTCTTCCTCCTCCGCTTCCTTTTGCTCAGCACTTCCTTCGACCGCAGCCGCTGATTCCAATACTACACATGAAGCACCACAAATAGTGCAACTGAAGATTCAAGAAACGCACCAGATTCCTCAGCTGCCACTTCAGTTTAGTGGTAACAAATCAGGAGCCACTCCTCTGGCGAATGCCACCTTGTTGAATATACAACATTTTCACAAGAATCAACTGCAAACTTATGCACAAAAGAGAAATCTGCTTCCACCTGTGTACTCTTGTGAGCGGGAAGGTCCAGCTCATAACAGTCGTTTCAAGTGTAGAGTAACTATTGGTGGACAGACATATGAGGGTCAAGAGTTTCTTCCCACACTGAAGGATGCTGAACATGCAGCTGCAAAAGCTGCTTTAACGTCCATTCTTCCAAATGGAGTTCAAGAGGATGATTCTGGTTTATTCAAAAACCTTTTACAAGAATTGATTCAAAAGGAAGGGTTTTCTATACCAGTCTATAGCTCAAGGATGTCTGGTGAACCTCATGTGCCAGTTTTTGTTTCGTCAGTGGAGATAGAAGGAGAAACTTTTATGGGTCAAGAAGCAAGAAGCAAAAAGCAGGCAGAGTTGAGTGCAGCAAAGGTCGCTTACCATACCTTGAGAGAGCGTAAATCAAGTCAGCTACCTTTGGTCCCATCCTGCGCTCGGGAAGGGCAAGAAGCTTCCGAGATCTTATCTTCAAGTTTCCAGTCAAACCCAGCTGCTGAACTACATCCACAAGCCAGGCCTAACACACATGAGAACAGTGTAATTGCAGAAGGAAAACGTCAACGCTTGATCACTGTATCTTCAGGACCCTGCACTCCTACATCAGTAGGTGGGGAAGGATCTTCCTCTGATGTTGTACATGGCCGTGCGCAGGAGACGAACCACGGACCTAGCCCTGTGTCCCAAAATGGCTCCGCTAATTGCGTTATGGACTCTTCTCTTGGGCCACCAGCTAAAAGGAGTGCGTACAACAAGGTCTCTGTTTATTCACGCAAGTTAAATATTGAATATCCTGAAGGTACCACTATGTTGCCCATGAGCAATGAAAAGTGGTTTGTTTGCTCACACACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031048 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060145 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0070919 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0098542 GO:0098586 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
dsrm

Protein Analysis

458

Amino Acids

49.98

Weight (kDa)

7.65

Isoelectric Point (pI)

56.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
dsrm PF00035 3 - 65 5.4e-10 Double-stranded RNA binding motif
dsrm PF00035 161 - 224 2.6e-15 Double-stranded RNA binding motif
dsrm PF00035 240 - 304 2.2e-14 Double-stranded RNA binding motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1170
Acc65I GGTACC 1 cut(s) 1319
AccB1I GGYRCC 1 cut(s) 1319
AccB7I CCANNNNNTGG 1 cut(s) 139
AccBSI CCGCTC 1 cut(s) 544
AciI CCGC 9 cut(s) 46, 102, 180, 215, 288, 318, 324, 544, 1215
AclWI GGATC 2 cut(s) 147, 1147
AcoI YGGCCR 1 cut(s) 1162
AcuI CTGAAG 5 cut(s) 389, 392, 653, 1086, 1335
AcyI GRCGYC 1 cut(s) 177
AdeI CACNNNGTG 1 cut(s) 139
AfaI GTAC 5 cut(s) 59, 533, 1158, 1268, 1321
AfiI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1171
AgsI TTSAA 9 cut(s) 7, 377, 463, 574, 695, 718, 743, 993, 1307
AjnI CCWGG 2 cut(s) 227, 1034
Alw21I GWGCWC 1 cut(s) 27
Alw26I GTCTC 2 cut(s) 1169, 1282
AlwI GGATC 2 cut(s) 147, 1147
AlwNI CAGNNNCTG 2 cut(s) 326, 1016
Ama87I CYCGRG 1 cut(s) 957
AoxI GGCC 4 cut(s) 76, 1037, 1162, 1244
ApeKI GCWGC 8 cut(s) 16, 320, 400, 650, 653, 662, 887, 1013
Asp700I GAANNNNTTC 1 cut(s) 738
Asp718I GGTACC 1 cut(s) 1319
AspLEI GCGC 2 cut(s) 956, 1171
AspS9I GGNCC 5 cut(s) 551, 943, 1106, 1187, 1244
AsuHPI GGTGA 1 cut(s) 800
AvaI CYCGRG 1 cut(s) 957
AvaII GGWCC 4 cut(s) 551, 943, 1106, 1187
BanI GGYRCC 1 cut(s) 1319
BanII GRGCYC 1 cut(s) 27
BbsI GAAGAC 1 cut(s) 263
Bbv12I GWGCWC 1 cut(s) 27
BbvCI CCTCAGC 1 cut(s) 396
BbvI GCAGC 8 cut(s) 3, 332, 387, 640, 649, 662, 899, 1000
BccI CCATC 1 cut(s) 955
BceAI ACGGC 1 cut(s) 1149
BcgI CGANNNNNNTGC 2 cut(s) 294, 328
BciT130I CCWGG 2 cut(s) 229, 1036
BciVI GTATCC 1 cut(s) 136
BclI TGATCA 2 cut(s) 208, 1089
BcoDI GTCTC 2 cut(s) 1169, 1282
BfaI CTAG 1 cut(s) 1191
BfmI CTRYAG 2 cut(s) 17, 769
BfuI GTATCC 1 cut(s) 136
BglII AGATCT 1 cut(s) 981
BlpI GCTNAGC 1 cut(s) 301
Bme1390I CCNGG 2 cut(s) 229, 1036
Bme18I GGWCC 4 cut(s) 551, 943, 1106, 1187
BmeT110I CYCGRG 1 cut(s) 957
BmgT120I GGNCC 5 cut(s) 551, 943, 1106, 1187, 1244
BmiI GGNNCC 5 cut(s) 433, 945, 1108, 1213, 1321
BmrFI CCNGG 2 cut(s) 229, 1036
BmsI GCATC 1 cut(s) 628
BpiI GAAGAC 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 396
Bpu1102I GCTNAGC 1 cut(s) 301
BpuEI CTTGAG 2 cut(s) 760, 931
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 1282
BsaJI CCNNGG 3 cut(s) 69, 227, 1183
Bsc4I CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1171
Bse1I ACTGG 3 cut(s) 764, 803, 1000
Bse3DI GCAATG 1 cut(s) 1348
BseBI CCWGG 2 cut(s) 229, 1036
BseDI CCNNGG 3 cut(s) 69, 227, 1183
BseGI GGATG 7 cut(s) 87, 211, 643, 706, 786, 947, 1024
BseLI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1171
BseMI GCAATG 1 cut(s) 1348
BseMII CTCAG 2 cut(s) 315, 410
BseNI ACTGG 3 cut(s) 764, 803, 1000
BseRI GAGGAG 2 cut(s) 274, 429
BseXI GCAGC 8 cut(s) 3, 332, 387, 640, 649, 662, 899, 1000
BseYI CCCAGC 1 cut(s) 1009
BsgI GTGCAG 2 cut(s) 906, 1096
Bsh1285I CGRYCG 1 cut(s) 318
BshFI GGCC 4 cut(s) 78, 1039, 1164, 1246
BshNI GGYRCC 1 cut(s) 1319
BsiEI CGRYCG 1 cut(s) 318
BsiHKAI GWGCWC 1 cut(s) 27
BsiHKCI CYCGRG 1 cut(s) 957
BsiSI CCGG 1 cut(s) 53
BslFI GGGAC 3 cut(s) 230, 929, 1186
BslI CCNNNNNNNGG 4 cut(s) 139, 228, 957, 1171
BsmAI GTCTC 2 cut(s) 1169, 1282
BsmBI CGTCTC 1 cut(s) 1169
BsmFI GGGAC 3 cut(s) 230, 929, 1186
BsmI GAATGC 1 cut(s) 454
BsnI GGCC 4 cut(s) 78, 1039, 1164, 1246
Bso31I GGTCTC 1 cut(s) 1282
BsoBI CYCGRG 1 cut(s) 957
Bsp1286I GDGCHC 1 cut(s) 27
Bsp1407I TGTACA 1 cut(s) 1156
Bsp143I GATC 5 cut(s) 152, 208, 981, 1089, 1139
Bsp1720I GCTNAGC 1 cut(s) 301
BspACI CCGC 9 cut(s) 46, 102, 180, 215, 288, 318, 324, 544, 1215
BspANI GGCC 4 cut(s) 78, 1039, 1164, 1246
BspCNI CTCAG 2 cut(s) 314, 409
BspLI GGNNCC 5 cut(s) 433, 945, 1108, 1213, 1321
BspMAI CTGCAG 1 cut(s) 21
BspPI GGATC 2 cut(s) 147, 1147
BspT107I GGYRCC 1 cut(s) 1319
BspTNI GGTCTC 1 cut(s) 1282
BsrBI CCGCTC 1 cut(s) 544
BsrDI GCAATG 1 cut(s) 1348
BsrGI TGTACA 1 cut(s) 1156
BsrI ACTGG 3 cut(s) 764, 803, 1000
BssECI CCNNGG 3 cut(s) 69, 227, 1183
BssMI GATC 5 cut(s) 152, 208, 981, 1089, 1139
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 69
Bst2UI CCWGG 2 cut(s) 229, 1036
Bst4CI ACNGT 5 cut(s) 109, 139, 566, 1058, 1096
Bst6I CTCTTC 2 cut(s) 283, 1240
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 662
BstAUI TGTACA 1 cut(s) 1156
BstC8I GCNNGC 2 cut(s) 32, 873
BstDEI CTNAG 2 cut(s) 301, 396
BstDSI CCRYGG 1 cut(s) 1183
BstF5I GGATG 7 cut(s) 87, 211, 643, 706, 786, 947, 1024
BstHHI GCGC 2 cut(s) 956, 1171
BstKTI GATC 5 cut(s) 155, 211, 984, 1092, 1142
BstMAI GTCTC 2 cut(s) 1169, 1282
BstMBI GATC 5 cut(s) 152, 208, 981, 1089, 1139
BstMCI CGRYCG 1 cut(s) 318
BstMWI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
BstNI CCWGG 2 cut(s) 229, 1036
BstNSI RCATGY 1 cut(s) 650
BstSCI CCNGG 2 cut(s) 227, 1034
BstSFI CTRYAG 2 cut(s) 17, 769
BstV1I GCAGC 8 cut(s) 3, 332, 387, 640, 649, 662, 899, 1000
BstV2I GAAGAC 1 cut(s) 263
BstX2I RGATCY 3 cut(s) 152, 981, 1139
BstXI CCANNNNNNTGG 1 cut(s) 442
BstYI RGATCY 3 cut(s) 152, 981, 1139
BsuI GTATCC 1 cut(s) 136
BsuRI GGCC 4 cut(s) 78, 1039, 1164, 1246
BtgI CCRYGG 1 cut(s) 1183
BtsCI GGATG 7 cut(s) 87, 211, 643, 706, 786, 947, 1024
BtsIMutI CAGTG 5 cut(s) 144, 629, 825, 1063, 1092
Cac8I GCNNGC 2 cut(s) 32, 873
CaiI CAGNNNCTG 2 cut(s) 326, 1016
CfoI GCGC 2 cut(s) 956, 1171
Cfr13I GGNCC 5 cut(s) 551, 943, 1106, 1187, 1244
CseI GACGC 1 cut(s) 185
Csp6I GTAC 5 cut(s) 58, 532, 1157, 1267, 1320
CspCI CAANNNNNGTGG 4 cut(s) 55, 74, 90, 109
CviAII CATG 7 cut(s) 344, 647, 797, 1049, 1160, 1336, 1371
CviQI GTAC 5 cut(s) 58, 532, 1157, 1267, 1320
DdeI CTNAG 2 cut(s) 301, 396
DpnI GATC 5 cut(s) 154, 210, 983, 1091, 1141
DpnII GATC 5 cut(s) 152, 208, 981, 1089, 1139
DraIII CACNNNGTG 1 cut(s) 139
EaeI YGGCCR 1 cut(s) 1162
Eam1104I CTCTTC 2 cut(s) 283, 1240
EarI CTCTTC 2 cut(s) 283, 1240
EciI GGCGGA 1 cut(s) 91
Ecl136II GAGCTC 1 cut(s) 25
Eco130I CCWWGG 1 cut(s) 69
Eco147I AGGCCT 1 cut(s) 1039
Eco24I GRGCYC 1 cut(s) 27
Eco31I GGTCTC 1 cut(s) 1282
Eco47I GGWCC 4 cut(s) 551, 943, 1106, 1187
Eco53kI GAGCTC 1 cut(s) 25
Eco57I CTGAAG 5 cut(s) 389, 392, 653, 1086, 1335
Eco88I CYCGRG 1 cut(s) 957
EcoICRI GAGCTC 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 1106
EcoRII CCWGG 2 cut(s) 227, 1034
EcoT14I CCWWGG 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 27
ErhI CCWWGG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 1169
FaeI CATG 7 cut(s) 347, 650, 800, 1052, 1163, 1339, 1374
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 3 cut(s) 230, 929, 1186
FatI CATG 7 cut(s) 343, 646, 796, 1048, 1159, 1335, 1370
FauI CCCGC 1 cut(s) 537
FauNDI CATATG 1 cut(s) 604
FbaI TGATCA 2 cut(s) 208, 1089
FokI GGATG 7 cut(s) 74, 198, 650, 713, 793, 934, 1011
FriOI GRGCYC 1 cut(s) 27
FspBI CTAG 1 cut(s) 1191
FspI TGCGCA 1 cut(s) 1170
GlaI GCGC 2 cut(s) 955, 1170
GsaI CCCAGC 1 cut(s) 1013
HaeIII GGCC 4 cut(s) 78, 1039, 1164, 1246
HapII CCGG 1 cut(s) 53
HgaI GACGC 1 cut(s) 185
HhaI GCGC 2 cut(s) 956, 1171
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 7 cut(s) 347, 650, 800, 1052, 1163, 1339, 1374
Hin6I GCGC 2 cut(s) 954, 1169
HinP1I GCGC 2 cut(s) 954, 1169
HincII GTYRAC 1 cut(s) 1082
HindII GTYRAC 1 cut(s) 1082
HindIII AAGCTT 1 cut(s) 972
HinfI GANTC 8 cut(s) 232, 329, 373, 391, 484, 704, 739, 1232
HpaII CCGG 1 cut(s) 53
HphI GGTGA 1 cut(s) 800
Hpy166II GTNNAC 4 cut(s) 532, 596, 791, 1082
Hpy188I TCNGA 3 cut(s) 208, 979, 1150
Hpy188III TCNNGA 8 cut(s) 377, 429, 614, 695, 851, 959, 1104, 1313
Hpy8I GTNNAC 4 cut(s) 532, 596, 791, 1082
Hpy99I CGWCG 1 cut(s) 179
HpyCH4III ACNGT 5 cut(s) 109, 139, 566, 1058, 1096
HpyCH4IV ACGT 2 cut(s) 671, 1078
HpyCH4V TGCA 9 cut(s) 19, 364, 493, 503, 650, 656, 887, 1067, 1113
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
HpyF3I CTNAG 2 cut(s) 301, 396
HpySE526I ACGT 2 cut(s) 671, 1078
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 7 cut(s) 347, 650, 800, 1052, 1163, 1339, 1374
HspAI GCGC 2 cut(s) 954, 1169
KpnI GGTACC 1 cut(s) 1323
Ksp22I TGATCA 2 cut(s) 208, 1089
Kzo9I GATC 5 cut(s) 152, 208, 981, 1089, 1139
LmnI GCTCC 3 cut(s) 22, 431, 1217
Lsp1109I GCAGC 8 cut(s) 3, 332, 387, 640, 649, 662, 899, 1000
LweI GCATC 1 cut(s) 628
MaeI CTAG 1 cut(s) 1191
MaeII ACGT 2 cut(s) 671, 1078
MaeIII GTNAC 3 cut(s) 109, 419, 583
MalI GATC 5 cut(s) 154, 210, 983, 1091, 1141
MbiI CCGCTC 1 cut(s) 544
MboI GATC 5 cut(s) 152, 208, 981, 1089, 1139
MboII GAAGA 9 cut(s) 263, 270, 382, 614, 671, 981, 1092, 1134, 1227
MflI RGATCY 3 cut(s) 152, 981, 1139
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 3 cut(s) 734, 1062, 1219
MlyI GAGTC 1 cut(s) 1226
MroXI GAANNNNTTC 1 cut(s) 738
MseI TTAA 2 cut(s) 668, 1298
MslI CAYNNNNRTG 2 cut(s) 1164, 1369
MspA1I CMGCKG 4 cut(s) 326, 400, 653, 1013
MspI CCGG 1 cut(s) 53
MspR9I CCNGG 2 cut(s) 229, 1036
Mva1269I GAATGC 1 cut(s) 454
MvaI CCWGG 2 cut(s) 229, 1036
MwoI GCNNNNNNNGC 7 cut(s) 22, 31, 188, 647, 659, 662, 896
NdeI CATATG 1 cut(s) 604
NdeII GATC 5 cut(s) 152, 208, 981, 1089, 1139
NlaIII CATG 7 cut(s) 347, 650, 800, 1052, 1163, 1339, 1374
NlaIV GGNNCC 5 cut(s) 433, 945, 1108, 1213, 1321
NsbI TGCGCA 1 cut(s) 1170
NspI RCATGY 1 cut(s) 650
PceI AGGCCT 1 cut(s) 1039
PctI GAATGC 1 cut(s) 454
PdmI GAANNNNTTC 1 cut(s) 738
PfeI GAWTC 7 cut(s) 232, 329, 373, 391, 484, 704, 739
PflMI CCANNNNNTGG 1 cut(s) 139
PleI GAGTC 1 cut(s) 1226
PpsI GAGTC 1 cut(s) 1226
PpuMI RGGWCCY 1 cut(s) 1106
Psp124BI GAGCTC 1 cut(s) 27
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 227, 1034
PspFI CCCAGC 1 cut(s) 1009
PspGI CCWGG 2 cut(s) 227, 1034
PspN4I GGNNCC 5 cut(s) 433, 945, 1108, 1213, 1321
PspPI GGNCC 5 cut(s) 551, 943, 1106, 1187, 1244
PspPPI RGGWCCY 1 cut(s) 1106
PstI CTGCAG 1 cut(s) 21
PstNI CAGNNNCTG 2 cut(s) 326, 1016
PsuI RGATCY 3 cut(s) 152, 981, 1139
PvuII CAGCTG 3 cut(s) 400, 653, 1013
RsaI GTAC 5 cut(s) 59, 533, 1158, 1268, 1321
RsaNI GTAC 5 cut(s) 58, 532, 1157, 1267, 1320
RseI CAYNNNNRTG 2 cut(s) 1164, 1369
SacI GAGCTC 1 cut(s) 27
SaqAI TTAA 2 cut(s) 668, 1298
Sau3AI GATC 5 cut(s) 152, 208, 981, 1089, 1139
Sau96I GGNCC 5 cut(s) 551, 943, 1106, 1187, 1244
SchI GAGTC 1 cut(s) 1226
ScrFI CCNGG 2 cut(s) 229, 1036
SduI GDGCHC 1 cut(s) 27
SfaNI GCATC 1 cut(s) 628
SfcI CTRYAG 2 cut(s) 17, 769
SinI GGWCC 4 cut(s) 551, 943, 1106, 1187
SmiMI CAYNNNNRTG 2 cut(s) 1164, 1369
SmlI CTYRAG 2 cut(s) 775, 910
SmoI CTYRAG 2 cut(s) 775, 910
Sse9I AATT 3 cut(s) 734, 1062, 1219
SseBI AGGCCT 1 cut(s) 1039
SsiI CCGC 9 cut(s) 46, 102, 180, 215, 288, 318, 324, 544, 1215
SspI AATATT 1 cut(s) 1303
SspMI CTAG 1 cut(s) 1191
SstI GAGCTC 1 cut(s) 27
StuI AGGCCT 1 cut(s) 1039
StyD4I CCNGG 2 cut(s) 227, 1034
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 5 cut(s) 109, 139, 566, 1058, 1096
TaiI ACGT 2 cut(s) 674, 1081
TaqI TCGA 5 cut(s) 11, 81, 126, 195, 314
TasI AATT 3 cut(s) 734, 1062, 1219
TatI WGTACW 3 cut(s) 57, 531, 1156
TauI GCSGC 2 cut(s) 182, 326
TfiI GAWTC 7 cut(s) 232, 329, 373, 391, 484, 704, 739
Tru1I TTAA 2 cut(s) 668, 1298
Tru9I TTAA 2 cut(s) 668, 1298
TscAI CASTG 5 cut(s) 144, 636, 825, 1063, 1099
TseI GCWGC 8 cut(s) 16, 320, 400, 650, 653, 662, 887, 1013
TspDTI ATGAA 2 cut(s) 360, 1359
TspGWI ACGGA 1 cut(s) 1200
TspRI CASTG 5 cut(s) 144, 636, 825, 1063, 1099
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 4 cut(s) 551, 943, 1106, 1187
XceI RCATGY 1 cut(s) 650
XmnI GAANNNNTTC 1 cut(s) 738
XspI CTAG 1 cut(s) 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.