protection from non-homologous end joining at telomere
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19020 |
| fragaria_vesca | FvH4_4g35190 |
| malus_domestica | MD06G1181300.v1.1 MD14G1187200.v1.1 MD16G1084900.v1.1 |
| prunus_persica | Prupe.1G261100_v2.0.a1 Prupe.1G261200_v2.0.a1 Prupe.5G179600_v2.0.a1 |
| pyrus_communis | pycom06g16030 pycom13g07400 pycom14g15510 |
| rosa_chinensis | RchiOBHm_Chr4g0444801 RchiOBHm_Chr7g0179751 |
| rosa_laevigata | RLG00000005801 |
| rosa_multiflora | Rmu_sc0000096.1_g000020 Rmu_sc0007130.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00273500 Rroxscaffold_5G00385290 |
| rosa_rugosa | Rorug04G0355300 Rorug06G0427800 |
| rosa_samantha | Rh3DG178000 Rh4BG428000 Rh4BG428100 Rh4CG442800 Rh4CG442900 Rh4DG423700 Rh4DG423800 Rh7AG027400 Rh7BG026500 Rh7CG028500 Rh7DG028100 |
| rosa_wichuraiana | Rw4G035700 Rw7G002200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 221 |
| AfaI | GTAC | 1 cut(s) | 227 |
| AgsI | TTSAA | 1 cut(s) | 131 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 123, 155 |
| AluBI | AGCT | 2 cut(s) | 96, 194 |
| AluI | AGCT | 2 cut(s) | 96, 194 |
| Alw21I | GWGCWC | 1 cut(s) | 196 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 221 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| BanII | GRGCYC | 1 cut(s) | 196 |
| BauI | CACGAG | 1 cut(s) | 23 |
| Bbv12I | GWGCWC | 1 cut(s) | 196 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BmsI | GCATC | 2 cut(s) | 14, 170 |
| BsaI | GGTCTC | 1 cut(s) | 77 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| Bse1I | ACTGG | 1 cut(s) | 215 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseNI | ACTGG | 1 cut(s) | 215 |
| BsiHKAI | GWGCWC | 1 cut(s) | 196 |
| BsiSI | CCGG | 2 cut(s) | 99, 240 |
| BslFI | GGGAC | 1 cut(s) | 62 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 62 |
| Bso31I | GGTCTC | 1 cut(s) | 77 |
| Bsp1286I | GDGCHC | 1 cut(s) | 196 |
| Bsp143I | GATC | 2 cut(s) | 40, 213 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspPI | GGATC | 1 cut(s) | 221 |
| BspTNI | GGTCTC | 1 cut(s) | 77 |
| BsrI | ACTGG | 1 cut(s) | 215 |
| BssMI | GATC | 2 cut(s) | 40, 213 |
| BssSI | CACGAG | 1 cut(s) | 23 |
| Bst2BI | CACGAG | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstKTI | GATC | 2 cut(s) | 43, 216 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 2 cut(s) | 40, 213 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 2 cut(s) | 50, 208 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Csp6I | GTAC | 1 cut(s) | 226 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 138, 173 |
| CviAII | CATG | 2 cut(s) | 33, 172 |
| CviJI | RGCY | 4 cut(s) | 38, 96, 139, 194 |
| CviKI_1 | RGCY | 4 cut(s) | 38, 96, 139, 194 |
| CviQI | GTAC | 1 cut(s) | 226 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 2 cut(s) | 42, 215 |
| DpnII | GATC | 2 cut(s) | 40, 213 |
| Ecl136II | GAGCTC | 1 cut(s) | 194 |
| Eco24I | GRGCYC | 1 cut(s) | 196 |
| Eco31I | GGTCTC | 1 cut(s) | 77 |
| Eco53kI | GAGCTC | 1 cut(s) | 194 |
| EcoICRI | GAGCTC | 1 cut(s) | 194 |
| EcoT38I | GRGCYC | 1 cut(s) | 196 |
| FaeI | CATG | 2 cut(s) | 36, 175 |
| FaiI | YATR | 3 cut(s) | 34, 117, 173 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 123, 155 |
| FaqI | GGGAC | 1 cut(s) | 62 |
| FatI | CATG | 2 cut(s) | 32, 171 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| FriOI | GRGCYC | 1 cut(s) | 196 |
| GlaI | GCGC | 1 cut(s) | 103 |
| HapII | CCGG | 2 cut(s) | 99, 240 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1II | CATG | 2 cut(s) | 36, 175 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HpaII | CCGG | 2 cut(s) | 99, 240 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy188III | TCNNGA | 2 cut(s) | 23, 189 |
| HpyAV | CCTTC | 1 cut(s) | 128 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 116 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Hsp92II | CATG | 2 cut(s) | 36, 175 |
| HspAI | GCGC | 1 cut(s) | 102 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| Kzo9I | GATC | 2 cut(s) | 40, 213 |
| LmnI | GCTCC | 2 cut(s) | 101, 191 |
| LpnPI | CCDG | 5 cut(s) | 75, 87, 112, 174, 196 |
| LweI | GCATC | 2 cut(s) | 14, 170 |
| MalI | GATC | 2 cut(s) | 42, 215 |
| MboI | GATC | 2 cut(s) | 40, 213 |
| MboII | GAAGA | 1 cut(s) | 143 |
| MhlI | GDGCHC | 1 cut(s) | 196 |
| MspI | CCGG | 2 cut(s) | 99, 240 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 116 |
| NdeII | GATC | 2 cut(s) | 40, 213 |
| NlaIII | CATG | 2 cut(s) | 36, 175 |
| Psp124BI | GAGCTC | 1 cut(s) | 196 |
| RsaI | GTAC | 1 cut(s) | 227 |
| RsaNI | GTAC | 1 cut(s) | 226 |
| SacI | GAGCTC | 1 cut(s) | 196 |
| Sau3AI | GATC | 2 cut(s) | 40, 213 |
| SduI | GDGCHC | 1 cut(s) | 196 |
| SetI | ASST | 2 cut(s) | 98, 196 |
| SfaNI | GCATC | 2 cut(s) | 14, 170 |
| SstI | GAGCTC | 1 cut(s) | 196 |
| TscAI | CASTG | 2 cut(s) | 50, 215 |
| TspDTI | ATGAA | 1 cut(s) | 188 |
| TspRI | CASTG | 2 cut(s) | 50, 215 |