No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19020 |
| fragaria_vesca | FvH4_4g35190 |
| malus_domestica | MD06G1181300.v1.1 MD14G1187200.v1.1 MD16G1084900.v1.1 |
| prunus_persica | Prupe.1G261100_v2.0.a1 Prupe.1G261200_v2.0.a1 Prupe.5G179600_v2.0.a1 |
| pyrus_communis | pycom06g16030 pycom13g07400 pycom14g15510 |
| rosa_chinensis | RchiOBHm_Chr4g0444801 RchiOBHm_Chr7g0179751 |
| rosa_laevigata | RLG00000005801 |
| rosa_multiflora | Rmu_sc0000096.1_g000020 Rmu_sc0007130.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00273500 Rroxscaffold_5G00385290 |
| rosa_rugosa | Rorug04G0355300 Rorug06G0427800 |
| rosa_samantha | Rh3DG178000 Rh4BG428000 Rh4BG428100 Rh4CG442800 Rh4CG442900 Rh4DG423700 Rh4DG423800 Rh7AG027400 Rh7BG026500 Rh7CG028500 Rh7DG028100 |
| rosa_wichuraiana | Rw4G035700 Rw7G002200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 144 |
| AclWI | GGATC | 1 cut(s) | 198 |
| AfaI | GTAC | 1 cut(s) | 204 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 16 |
| AjnI | CCWGG | 1 cut(s) | 186 |
| AluBI | AGCT | 2 cut(s) | 60, 171 |
| AluI | AGCT | 2 cut(s) | 60, 171 |
| Alw21I | GWGCWC | 1 cut(s) | 173 |
| AlwI | GGATC | 1 cut(s) | 198 |
| AoxI | GGCC | 2 cut(s) | 48, 84 |
| AsuC2I | CCSGG | 1 cut(s) | 32 |
| BanII | GRGCYC | 1 cut(s) | 173 |
| BbsI | GAAGAC | 1 cut(s) | 174 |
| Bbv12I | GWGCWC | 1 cut(s) | 173 |
| BccI | CCATC | 3 cut(s) | 59, 65, 146 |
| BciT130I | CCWGG | 1 cut(s) | 188 |
| BcnI | CCSGG | 1 cut(s) | 32 |
| BmcAI | AGTACT | 1 cut(s) | 204 |
| Bme1390I | CCNGG | 2 cut(s) | 32, 188 |
| BmrFI | CCNGG | 2 cut(s) | 32, 188 |
| BpiI | GAAGAC | 1 cut(s) | 174 |
| BpuMI | CCSGG | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 186 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseBI | CCWGG | 1 cut(s) | 188 |
| BseDI | CCNNGG | 1 cut(s) | 186 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BshFI | GGCC | 2 cut(s) | 50, 86 |
| BsiHKAI | GWGCWC | 1 cut(s) | 173 |
| BsiSI | CCGG | 1 cut(s) | 32 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 144 |
| BsnI | GGCC | 2 cut(s) | 50, 86 |
| Bsp1286I | GDGCHC | 1 cut(s) | 173 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| BspANI | GGCC | 2 cut(s) | 50, 86 |
| BspCNI | CTCAG | 1 cut(s) | 37 |
| BspPI | GGATC | 1 cut(s) | 198 |
| BspQI | GCTCTTC | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 186 |
| BssMI | GATC | 1 cut(s) | 190 |
| Bst2UI | CCWGG | 1 cut(s) | 188 |
| Bst6I | CTCTTC | 1 cut(s) | 11 |
| BstDEI | CTNAG | 1 cut(s) | 45 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 47 |
| BstNI | CCWGG | 1 cut(s) | 188 |
| BstSCI | CCNGG | 2 cut(s) | 30, 186 |
| BstV2I | GAAGAC | 1 cut(s) | 174 |
| BsuRI | GGCC | 2 cut(s) | 50, 86 |
| Csp6I | GTAC | 1 cut(s) | 203 |
| CviJI | RGCY | 4 cut(s) | 50, 60, 86, 171 |
| CviKI_1 | RGCY | 4 cut(s) | 50, 60, 86, 171 |
| CviQI | GTAC | 1 cut(s) | 203 |
| DdeI | CTNAG | 1 cut(s) | 45 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 11 |
| EarI | CTCTTC | 1 cut(s) | 11 |
| Ecl136II | GAGCTC | 1 cut(s) | 171 |
| Eco24I | GRGCYC | 1 cut(s) | 173 |
| Eco53kI | GAGCTC | 1 cut(s) | 171 |
| EcoICRI | GAGCTC | 1 cut(s) | 171 |
| EcoRII | CCWGG | 1 cut(s) | 186 |
| EcoT38I | GRGCYC | 1 cut(s) | 173 |
| FaiI | YATR | 1 cut(s) | 208 |
| FriOI | GRGCYC | 1 cut(s) | 173 |
| HaeIII | GGCC | 2 cut(s) | 50, 86 |
| HapII | CCGG | 1 cut(s) | 32 |
| HpaII | CCGG | 1 cut(s) | 32 |
| Hpy166II | GTNNAC | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 64 |
| Hpy188III | TCNNGA | 2 cut(s) | 26, 161 |
| Hpy8I | GTNNAC | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 47 |
| HpyF3I | CTNAG | 1 cut(s) | 45 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LguI | GCTCTTC | 1 cut(s) | 11 |
| LmnI | GCTCC | 1 cut(s) | 168 |
| LpnPI | CCDG | 5 cut(s) | 39, 45, 140, 173, 200 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 2 cut(s) | 28, 174 |
| MhlI | GDGCHC | 1 cut(s) | 173 |
| MnlI | CCTC | 1 cut(s) | 40 |
| MseI | TTAA | 1 cut(s) | 126 |
| MspI | CCGG | 1 cut(s) | 32 |
| MspR9I | CCNGG | 2 cut(s) | 32, 188 |
| MvaI | CCWGG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 47 |
| NciI | CCSGG | 1 cut(s) | 32 |
| NdeII | GATC | 1 cut(s) | 190 |
| PciSI | GCTCTTC | 1 cut(s) | 11 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 144 |
| Psp124BI | GAGCTC | 1 cut(s) | 173 |
| Psp6I | CCWGG | 1 cut(s) | 186 |
| PspGI | CCWGG | 1 cut(s) | 186 |
| RsaI | GTAC | 1 cut(s) | 204 |
| RsaNI | GTAC | 1 cut(s) | 203 |
| SacI | GAGCTC | 1 cut(s) | 173 |
| SapI | GCTCTTC | 1 cut(s) | 11 |
| SaqAI | TTAA | 1 cut(s) | 126 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| ScaI | AGTACT | 1 cut(s) | 204 |
| ScrFI | CCNGG | 2 cut(s) | 32, 188 |
| SduI | GDGCHC | 1 cut(s) | 173 |
| SetI | ASST | 2 cut(s) | 62, 173 |
| SstI | GAGCTC | 1 cut(s) | 173 |
| StyD4I | CCNGG | 2 cut(s) | 30, 186 |
| TatI | WGTACW | 1 cut(s) | 202 |
| Tru1I | TTAA | 1 cut(s) | 126 |
| Tru9I | TTAA | 1 cut(s) | 126 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 144 |
| ZrmI | AGTACT | 1 cut(s) | 204 |