protection from non-homologous end joining at telomere
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19020 |
| fragaria_vesca | FvH4_4g35190 |
| malus_domestica | MD06G1181300.v1.1 MD14G1187200.v1.1 MD16G1084900.v1.1 |
| prunus_persica | Prupe.1G261100_v2.0.a1 Prupe.1G261200_v2.0.a1 Prupe.5G179600_v2.0.a1 |
| pyrus_communis | pycom06g16030 pycom13g07400 pycom14g15510 |
| rosa_chinensis | RchiOBHm_Chr4g0444801 RchiOBHm_Chr7g0179751 |
| rosa_laevigata | RLG00000005801 |
| rosa_multiflora | Rmu_sc0000096.1_g000020 Rmu_sc0007130.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00273500 Rroxscaffold_5G00385290 |
| rosa_rugosa | Rorug04G0355300 Rorug06G0427800 |
| rosa_samantha | Rh3DG178000 Rh4BG428000 Rh4BG428100 Rh4CG442800 Rh4CG442900 Rh4DG423700 Rh4DG423800 Rh7AG027400 Rh7BG026500 Rh7CG028500 Rh7DG028100 |
| rosa_wichuraiana | Rw4G035700 Rw7G002200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 60 |
| AccBSI | CCGCTC | 1 cut(s) | 199 |
| AccI | GTMKAC | 1 cut(s) | 623 |
| AccII | CGCG | 3 cut(s) | 109, 193, 384 |
| AciI | CCGC | 7 cut(s) | 199, 214, 278, 297, 382, 451, 500 |
| AclWI | GGATC | 4 cut(s) | 160, 196, 256, 728 |
| AcoI | YGGCCR | 1 cut(s) | 200 |
| AcuI | CTGAAG | 1 cut(s) | 506 |
| AcyI | GRCGYC | 2 cut(s) | 33, 668 |
| AfaI | GTAC | 3 cut(s) | 149, 610, 734 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 209, 327, 580 |
| AgeI | ACCGGT | 1 cut(s) | 41 |
| AgsI | TTSAA | 1 cut(s) | 220 |
| AjnI | CCWGG | 1 cut(s) | 386 |
| AluBI | AGCT | 4 cut(s) | 291, 346, 393, 701 |
| AluI | AGCT | 4 cut(s) | 291, 346, 393, 701 |
| Alw21I | GWGCWC | 1 cut(s) | 703 |
| Alw26I | GTCTC | 2 cut(s) | 23, 465 |
| AlwI | GGATC | 4 cut(s) | 160, 196, 256, 728 |
| AoxI | GGCC | 3 cut(s) | 200, 353, 615 |
| AsiGI | ACCGGT | 1 cut(s) | 41 |
| AspLEI | GCGC | 2 cut(s) | 61, 386 |
| AsuHPI | GGTGA | 3 cut(s) | 31, 417, 700 |
| AsuII | TTCGAA | 1 cut(s) | 432 |
| BaeGI | GKGCMC | 1 cut(s) | 508 |
| BanII | GRGCYC | 1 cut(s) | 703 |
| BauI | CACGAG | 2 cut(s) | 541, 604 |
| BbsI | GAAGAC | 2 cut(s) | 221, 698 |
| Bbv12I | GWGCWC | 1 cut(s) | 703 |
| BccI | CCATC | 2 cut(s) | 264, 268 |
| BceAI | ACGGC | 1 cut(s) | 20 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 38, 72 |
| BciT130I | CCWGG | 1 cut(s) | 388 |
| BciVI | GTATCC | 1 cut(s) | 588 |
| BclI | TGATCA | 1 cut(s) | 592 |
| BcoDI | GTCTC | 2 cut(s) | 23, 465 |
| BfuI | GTATCC | 1 cut(s) | 588 |
| BglII | AGATCT | 1 cut(s) | 166 |
| BisI | GCNGC | 3 cut(s) | 200, 279, 382 |
| BlpI | GCTNAGC | 1 cut(s) | 287 |
| BlsI | GCNGC | 3 cut(s) | 201, 280, 383 |
| Bme1390I | CCNGG | 1 cut(s) | 388 |
| BmiI | GGNNCC | 1 cut(s) | 236 |
| BmrFI | CCNGG | 1 cut(s) | 388 |
| BmsI | GCATC | 2 cut(s) | 438, 470 |
| BpiI | GAAGAC | 2 cut(s) | 221, 698 |
| BpmI | CTGGAG | 1 cut(s) | 409 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 287 |
| Bpu14I | TTCGAA | 1 cut(s) | 432 |
| Bsa29I | ATCGAT | 1 cut(s) | 103 |
| BsaHI | GRCGYC | 2 cut(s) | 33, 668 |
| BsaI | GGTCTC | 2 cut(s) | 23, 465 |
| BsaJI | CCNNGG | 4 cut(s) | 159, 203, 400, 475 |
| BsaWI | WCCGGW | 4 cut(s) | 41, 237, 438, 746 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 690, 720 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 209, 327, 580 |
| Bse118I | RCCGGY | 1 cut(s) | 41 |
| Bse1I | ACTGG | 1 cut(s) | 722 |
| BseBI | CCWGG | 1 cut(s) | 388 |
| BseCI | ATCGAT | 1 cut(s) | 103 |
| BseDI | CCNNGG | 4 cut(s) | 159, 203, 400, 475 |
| BseGI | GGATG | 3 cut(s) | 279, 485, 684 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 209, 327, 580 |
| BseMII | CTCAG | 3 cut(s) | 82, 278, 348 |
| BseNI | ACTGG | 1 cut(s) | 722 |
| BseSI | GKGCMC | 1 cut(s) | 508 |
| BseYI | CCCAGC | 1 cut(s) | 377 |
| Bsh1236I | CGCG | 3 cut(s) | 109, 193, 384 |
| Bsh1285I | CGRYCG | 2 cut(s) | 107, 266 |
| BshFI | GGCC | 3 cut(s) | 202, 355, 617 |
| BshTI | ACCGGT | 1 cut(s) | 41 |
| BshVI | ATCGAT | 1 cut(s) | 103 |
| BsiEI | CGRYCG | 2 cut(s) | 107, 266 |
| BsiHKAI | GWGCWC | 1 cut(s) | 703 |
| BsiSI | CCGG | 5 cut(s) | 42, 238, 439, 581, 747 |
| BslFI | GGGAC | 1 cut(s) | 572 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 209, 327, 580 |
| BsmAI | GTCTC | 2 cut(s) | 23, 465 |
| BsmFI | GGGAC | 1 cut(s) | 572 |
| BsnI | GGCC | 3 cut(s) | 202, 355, 617 |
| Bso31I | GGTCTC | 2 cut(s) | 23, 465 |
| Bsp119I | TTCGAA | 1 cut(s) | 432 |
| Bsp1286I | GDGCHC | 2 cut(s) | 508, 703 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 287 |
| Bsp19I | CCATGG | 1 cut(s) | 159 |
| Bsp68I | TCGCGA | 1 cut(s) | 193 |
| BspACI | CCGC | 7 cut(s) | 199, 214, 278, 297, 382, 451, 500 |
| BspANI | GGCC | 3 cut(s) | 202, 355, 617 |
| BspCNI | CTCAG | 3 cut(s) | 81, 279, 349 |
| BspDI | ATCGAT | 1 cut(s) | 103 |
| BspFNI | CGCG | 3 cut(s) | 109, 193, 384 |
| BspHI | TCATGA | 1 cut(s) | 21 |
| BspLI | GGNNCC | 1 cut(s) | 236 |
| BspPI | GGATC | 4 cut(s) | 160, 196, 256, 728 |
| BspT104I | TTCGAA | 1 cut(s) | 432 |
| BspTNI | GGTCTC | 2 cut(s) | 23, 465 |
| BsrBI | CCGCTC | 1 cut(s) | 199 |
| BsrFI | RCCGGY | 1 cut(s) | 41 |
| BsrI | ACTGG | 1 cut(s) | 722 |
| BssAI | RCCGGY | 1 cut(s) | 41 |
| BssECI | CCNNGG | 4 cut(s) | 159, 203, 400, 475 |
| BssNAI | GTATAC | 1 cut(s) | 624 |
| BssNI | GRCGYC | 2 cut(s) | 33, 668 |
| BssSI | CACGAG | 2 cut(s) | 541, 604 |
| BssT1I | CCWWGG | 2 cut(s) | 159, 400 |
| Bst1107I | GTATAC | 1 cut(s) | 624 |
| Bst2BI | CACGAG | 2 cut(s) | 541, 604 |
| Bst2UI | CCWGG | 1 cut(s) | 388 |
| Bst4CI | ACNGT | 1 cut(s) | 457 |
| BstACI | GRCGYC | 2 cut(s) | 33, 668 |
| BstBI | TTCGAA | 1 cut(s) | 432 |
| BstDEI | CTNAG | 3 cut(s) | 68, 287, 357 |
| BstDSI | CCRYGG | 2 cut(s) | 159, 203 |
| BstF5I | GGATG | 3 cut(s) | 279, 485, 684 |
| BstFNI | CGCG | 3 cut(s) | 109, 193, 384 |
| BstHHI | GCGC | 2 cut(s) | 61, 386 |
| BstMAI | GTCTC | 2 cut(s) | 23, 465 |
| BstMCI | CGRYCG | 2 cut(s) | 107, 266 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 58, 199, 352, 390 |
| BstNI | CCWGG | 1 cut(s) | 388 |
| BstSCI | CCNGG | 1 cut(s) | 386 |
| BstSLI | GKGCMC | 1 cut(s) | 508 |
| BstUI | CGCG | 3 cut(s) | 109, 193, 384 |
| BstV2I | GAAGAC | 2 cut(s) | 221, 698 |
| BstX2I | RGATCY | 3 cut(s) | 152, 166, 248 |
| BstYI | RGATCY | 3 cut(s) | 152, 166, 248 |
| BstZ17I | GTATAC | 1 cut(s) | 624 |
| Bsu15I | ATCGAT | 1 cut(s) | 103 |
| BsuI | GTATCC | 1 cut(s) | 588 |
| BsuRI | GGCC | 3 cut(s) | 202, 355, 617 |
| BsuTUI | ATCGAT | 1 cut(s) | 103 |
| BtgI | CCRYGG | 2 cut(s) | 159, 203 |
| BtsCI | GGATG | 3 cut(s) | 279, 485, 684 |
| BtsI | GCAGTG | 1 cut(s) | 281 |
| BtsIMutI | CAGTG | 3 cut(s) | 281, 669, 715 |
| BtuMI | TCGCGA | 1 cut(s) | 193 |
| CciI | TCATGA | 1 cut(s) | 21 |
| CfoI | GCGC | 2 cut(s) | 61, 386 |
| Cfr10I | RCCGGY | 1 cut(s) | 41 |
| ClaI | ATCGAT | 1 cut(s) | 103 |
| CseI | GACGC | 2 cut(s) | 41, 657 |
| Csp6I | GTAC | 3 cut(s) | 148, 609, 733 |
| CspAI | ACCGGT | 1 cut(s) | 41 |
| CviAII | CATG | 5 cut(s) | 22, 53, 62, 160, 704 |
| CviQI | GTAC | 3 cut(s) | 148, 609, 733 |
| DdeI | CTNAG | 3 cut(s) | 68, 287, 357 |
| EaeI | YGGCCR | 1 cut(s) | 200 |
| Ecl136II | GAGCTC | 1 cut(s) | 701 |
| Eco130I | CCWWGG | 2 cut(s) | 159, 400 |
| Eco24I | GRGCYC | 1 cut(s) | 703 |
| Eco31I | GGTCTC | 2 cut(s) | 23, 465 |
| Eco53kI | GAGCTC | 1 cut(s) | 701 |
| Eco57I | CTGAAG | 1 cut(s) | 506 |
| EcoICRI | GAGCTC | 1 cut(s) | 701 |
| EcoRII | CCWGG | 1 cut(s) | 386 |
| EcoT14I | CCWWGG | 2 cut(s) | 159, 400 |
| EcoT38I | GRGCYC | 1 cut(s) | 703 |
| ErhI | CCWWGG | 2 cut(s) | 159, 400 |
| FaeI | CATG | 5 cut(s) | 25, 56, 65, 163, 707 |
| FaqI | GGGAC | 1 cut(s) | 572 |
| FatI | CATG | 5 cut(s) | 21, 52, 61, 159, 703 |
| FauI | CCCGC | 2 cut(s) | 290, 493 |
| FbaI | TGATCA | 1 cut(s) | 592 |
| FblI | GTMKAC | 1 cut(s) | 623 |
| Fnu4HI | GCNGC | 3 cut(s) | 200, 279, 382 |
| FokI | GGATG | 3 cut(s) | 286, 492, 691 |
| FriOI | GRGCYC | 1 cut(s) | 703 |
| Fsp4HI | GCNGC | 3 cut(s) | 200, 279, 382 |
| FspAI | RTGCGCAY | 1 cut(s) | 60 |
| FspI | TGCGCA | 1 cut(s) | 60 |
| GlaI | GCGC | 2 cut(s) | 60, 385 |
| GluI | GCNGC | 3 cut(s) | 200, 279, 382 |
| GsaI | CCCAGC | 1 cut(s) | 381 |
| GsuI | CTGGAG | 1 cut(s) | 409 |
| HaeIII | GGCC | 3 cut(s) | 202, 355, 617 |
| HapII | CCGG | 5 cut(s) | 42, 238, 439, 581, 747 |
| HgaI | GACGC | 2 cut(s) | 41, 657 |
| HhaI | GCGC | 2 cut(s) | 61, 386 |
| Hin1I | GRCGYC | 2 cut(s) | 33, 668 |
| Hin1II | CATG | 5 cut(s) | 25, 56, 65, 163, 707 |
| Hin6I | GCGC | 2 cut(s) | 59, 384 |
| HinP1I | GCGC | 2 cut(s) | 59, 384 |
| HinfI | GANTC | 1 cut(s) | 136 |
| HpaII | CCGG | 5 cut(s) | 42, 238, 439, 581, 747 |
| HphI | GGTGA | 3 cut(s) | 31, 417, 700 |
| Hpy166II | GTNNAC | 1 cut(s) | 624 |
| Hpy188III | TCNNGA | 4 cut(s) | 22, 115, 192, 267 |
| Hpy8I | GTNNAC | 1 cut(s) | 624 |
| Hpy99I | CGWCG | 2 cut(s) | 35, 673 |
| HpyAV | CCTTC | 5 cut(s) | 214, 439, 508, 635, 679 |
| HpyCH4III | ACNGT | 1 cut(s) | 457 |
| HpyCH4V | TGCA | 1 cut(s) | 466 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 58, 199, 352, 390 |
| HpyF3I | CTNAG | 3 cut(s) | 68, 287, 357 |
| Hsp92I | GRCGYC | 2 cut(s) | 33, 668 |
| Hsp92II | CATG | 5 cut(s) | 25, 56, 65, 163, 707 |
| HspAI | GCGC | 2 cut(s) | 59, 384 |
| Ksp22I | TGATCA | 1 cut(s) | 592 |
| LmnI | GCTCC | 2 cut(s) | 390, 698 |
| LweI | GCATC | 2 cut(s) | 438, 470 |
| MaeIII | GTNAC | 2 cut(s) | 37, 521 |
| MbiI | CCGCTC | 1 cut(s) | 199 |
| MboII | GAAGA | 4 cut(s) | 221, 296, 694, 703 |
| MflI | RGATCY | 3 cut(s) | 152, 166, 248 |
| MhlI | GDGCHC | 2 cut(s) | 508, 703 |
| MmeI | TCCRAC | 3 cut(s) | 318, 342, 624 |
| MnlI | CCTC | 8 cut(s) | 15, 94, 130, 203, 358, 470, 550, 631 |
| MspI | CCGG | 5 cut(s) | 42, 238, 439, 581, 747 |
| MspR9I | CCNGG | 1 cut(s) | 388 |
| MvaI | CCWGG | 1 cut(s) | 388 |
| MvnI | CGCG | 3 cut(s) | 109, 193, 384 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 58, 199, 352, 390 |
| NcoI | CCATGG | 1 cut(s) | 159 |
| NlaIII | CATG | 5 cut(s) | 25, 56, 65, 163, 707 |
| NlaIV | GGNNCC | 1 cut(s) | 236 |
| NmuCI | GTSAC | 1 cut(s) | 37 |
| NruI | TCGCGA | 1 cut(s) | 193 |
| NsbI | TGCGCA | 1 cut(s) | 60 |
| NspV | TTCGAA | 1 cut(s) | 432 |
| PagI | TCATGA | 1 cut(s) | 21 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PflFI | GACNNNGTC | 1 cut(s) | 35 |
| PinAI | ACCGGT | 1 cut(s) | 41 |
| PkrI | GCNGC | 3 cut(s) | 201, 280, 383 |
| Ple19I | CGATCG | 1 cut(s) | 107 |
| Psp124BI | GAGCTC | 1 cut(s) | 703 |
| Psp6I | CCWGG | 1 cut(s) | 386 |
| PspFI | CCCAGC | 1 cut(s) | 377 |
| PspGI | CCWGG | 1 cut(s) | 386 |
| PspN4I | GGNNCC | 1 cut(s) | 236 |
| PsuI | RGATCY | 3 cut(s) | 152, 166, 248 |
| PsyI | GACNNNGTC | 1 cut(s) | 35 |
| PvuI | CGATCG | 1 cut(s) | 107 |
| RruI | TCGCGA | 1 cut(s) | 193 |
| RsaI | GTAC | 3 cut(s) | 149, 610, 734 |
| RsaNI | GTAC | 3 cut(s) | 148, 609, 733 |
| SacI | GAGCTC | 1 cut(s) | 703 |
| SatI | GCNGC | 3 cut(s) | 200, 279, 382 |
| ScrFI | CCNGG | 1 cut(s) | 388 |
| SduI | GDGCHC | 2 cut(s) | 508, 703 |
| SetI | ASST | 9 cut(s) | 86, 122, 293, 348, 395, 542, 636, 690, 703 |
| SfaNI | GCATC | 2 cut(s) | 438, 470 |
| SfuI | TTCGAA | 1 cut(s) | 432 |
| SgrAI | CRCCGGYG | 1 cut(s) | 41 |
| SsiI | CCGC | 7 cut(s) | 199, 214, 278, 297, 382, 451, 500 |
| SstI | GAGCTC | 1 cut(s) | 703 |
| StyD4I | CCNGG | 1 cut(s) | 386 |
| StyI | CCWWGG | 2 cut(s) | 159, 400 |
| TaaI | ACNGT | 1 cut(s) | 457 |
| TaqI | TCGA | 7 cut(s) | 48, 103, 266, 332, 411, 432, 671 |
| TaqII | GACCGA | 3 cut(s) | 5, 252, 489 |
| TatI | WGTACW | 1 cut(s) | 608 |
| TauI | GCSGC | 3 cut(s) | 202, 281, 384 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| TscAI | CASTG | 3 cut(s) | 288, 669, 722 |
| TseFI | GTSAC | 1 cut(s) | 37 |
| Tsp45I | GTSAC | 1 cut(s) | 37 |
| TspDTI | ATGAA | 3 cut(s) | 38, 527, 695 |
| TspGWI | ACGGA | 2 cut(s) | 165, 220 |
| TspRI | CASTG | 3 cut(s) | 288, 669, 722 |
| Tth111I | GACNNNGTC | 1 cut(s) | 35 |
| XmiI | GTMKAC | 1 cut(s) | 623 |