Allene oxide cyclase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13280 |
| fragaria_vesca | FvH4_4g28021 FvH4_5g31510 FvH4_6g45370 |
| malus_domestica | MD09G1084600.v1.1 MD13G1045900.v1.1 MD16G1047500.v1.1 |
| prunus_persica | Prupe.1G306100_v2.0.a1 Prupe.3G239900_v2.0.a1 |
| pyrus_communis | pycom13g04030 pycom16g04150 |
| rosa_chinensis | RchiOBHm_Chr2g0163151 RchiOBHm_Chr4g0435751 RchiOBHm_Chr7g0226911 |
| rosa_laevigata | RLG00000001683 RLG00000006562 RLG00000021133 RLG00000021378 |
| rosa_multiflora | Rmu_co8225702.1_g000001 Rmu_co8452415.1_g000001 Rmu_sc0000051.1_g000021 Rmu_ssc0000104.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00087500 Rroxscaffold_3G00232430 Rroxscaffold_5G00376940 |
| rosa_rugosa | Rorug02G0501100 Rorug04G0289300 Rorug07G0240200 |
| rosa_samantha | Rh2AG567300 Rh2BG579600 Rh2CG549500 Rh2DG589900 Rh4AG343600 Rh4BG352300 Rh4CG366800 Rh4DG346200 Rh7AG388300 Rh7BG374300 Rh7CG407600 Rh7DG386400 |
| rosa_wichuraiana | Rw2G046980 Rw4G030000 Rw7G032570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 663 |
| AclWI | GGATC | 3 cut(s) | 403, 550, 557 |
| AcoI | YGGCCR | 1 cut(s) | 528 |
| AcuI | CTGAAG | 1 cut(s) | 602 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AdeI | CACNNNGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 3 cut(s) | 420, 443, 566 |
| AflIII | ACRYGT | 1 cut(s) | 615 |
| AgeI | ACCGGT | 1 cut(s) | 536 |
| AgsI | TTSAA | 4 cut(s) | 100, 222, 239, 628 |
| AluBI | AGCT | 7 cut(s) | 15, 80, 182, 212, 459, 580, 655 |
| AluI | AGCT | 7 cut(s) | 15, 80, 182, 212, 459, 580, 655 |
| Alw21I | GWGCWC | 2 cut(s) | 179, 657 |
| Alw26I | GTCTC | 4 cut(s) | 66, 264, 429, 465 |
| AlwI | GGATC | 3 cut(s) | 403, 550, 557 |
| AoxI | GGCC | 2 cut(s) | 528, 714 |
| ApeKI | GCWGC | 2 cut(s) | 279, 707 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 297, 329 |
| AsiGI | ACCGGT | 1 cut(s) | 536 |
| AsuHPI | GGTGA | 5 cut(s) | 60, 334, 338, 649, 739 |
| BaeGI | GKGCMC | 1 cut(s) | 483 |
| BanII | GRGCYC | 2 cut(s) | 657, 726 |
| BauI | CACGAG | 1 cut(s) | 172 |
| Bbv12I | GWGCWC | 2 cut(s) | 179, 657 |
| BbvI | GCAGC | 2 cut(s) | 291, 694 |
| BccI | CCATC | 3 cut(s) | 608, 706, 743 |
| BceAI | ACGGC | 1 cut(s) | 515 |
| BcoDI | GTCTC | 4 cut(s) | 66, 264, 429, 465 |
| BfmI | CTRYAG | 1 cut(s) | 454 |
| BglII | AGATCT | 1 cut(s) | 351 |
| BisI | GCNGC | 2 cut(s) | 280, 708 |
| BlsI | GCNGC | 2 cut(s) | 281, 709 |
| BmiI | GGNNCC | 3 cut(s) | 207, 499, 678 |
| BpuEI | CTTGAG | 1 cut(s) | 5 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 66 |
| BsaJI | CCNNGG | 2 cut(s) | 145, 711 |
| BsaWI | WCCGGW | 1 cut(s) | 536 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 126, 156, 362, 392 |
| Bse118I | RCCGGY | 3 cut(s) | 536, 659, 670 |
| BseDI | CCNNGG | 2 cut(s) | 145, 711 |
| BseGI | GGATG | 1 cut(s) | 735 |
| BseMII | CTCAG | 1 cut(s) | 313 |
| BseSI | GKGCMC | 1 cut(s) | 483 |
| BseXI | GCAGC | 2 cut(s) | 291, 694 |
| BseYI | CCCAGC | 1 cut(s) | 283 |
| BshFI | GGCC | 2 cut(s) | 530, 716 |
| BshTI | ACCGGT | 1 cut(s) | 536 |
| BsiHKAI | GWGCWC | 2 cut(s) | 179, 657 |
| BsiSI | CCGG | 4 cut(s) | 537, 660, 671, 704 |
| BslFI | GGGAC | 1 cut(s) | 377 |
| BsmAI | GTCTC | 4 cut(s) | 66, 264, 429, 465 |
| BsmFI | GGGAC | 1 cut(s) | 377 |
| BsmI | GAATGC | 1 cut(s) | 109 |
| BsnI | GGCC | 2 cut(s) | 530, 716 |
| Bso31I | GGTCTC | 1 cut(s) | 66 |
| Bsp1286I | GDGCHC | 4 cut(s) | 179, 483, 657, 726 |
| Bsp143I | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| BspACI | CCGC | 1 cut(s) | 663 |
| BspANI | GGCC | 2 cut(s) | 530, 716 |
| BspCNI | CTCAG | 1 cut(s) | 312 |
| BspLI | GGNNCC | 3 cut(s) | 207, 499, 678 |
| BspPI | GGATC | 3 cut(s) | 403, 550, 557 |
| BspTNI | GGTCTC | 1 cut(s) | 66 |
| BsrFI | RCCGGY | 3 cut(s) | 536, 659, 670 |
| BssAI | RCCGGY | 3 cut(s) | 536, 659, 670 |
| BssECI | CCNNGG | 2 cut(s) | 145, 711 |
| BssMI | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 172 |
| BssT1I | CCWWGG | 2 cut(s) | 145, 711 |
| Bst2BI | CACGAG | 1 cut(s) | 172 |
| Bst4CI | ACNGT | 1 cut(s) | 90 |
| Bst6I | CTCTTC | 1 cut(s) | 37 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 3 cut(s) | 13, 210, 394 |
| BstDEI | CTNAG | 2 cut(s) | 293, 299 |
| BstEII | GGTNACC | 1 cut(s) | 326 |
| BstF5I | GGATG | 1 cut(s) | 735 |
| BstKTI | GATC | 6 cut(s) | 261, 354, 411, 453, 545, 552 |
| BstMAI | GTCTC | 4 cut(s) | 66, 264, 429, 465 |
| BstMBI | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 652, 713 |
| BstNSI | RCATGY | 1 cut(s) | 251 |
| BstPI | GGTNACC | 1 cut(s) | 326 |
| BstSFI | CTRYAG | 1 cut(s) | 454 |
| BstSLI | GKGCMC | 1 cut(s) | 483 |
| BstV1I | GCAGC | 2 cut(s) | 291, 694 |
| BstX2I | RGATCY | 3 cut(s) | 351, 542, 549 |
| BstYI | RGATCY | 3 cut(s) | 351, 542, 549 |
| BsuRI | GGCC | 2 cut(s) | 530, 716 |
| BtsCI | GGATG | 1 cut(s) | 735 |
| Cac8I | GCNNGC | 3 cut(s) | 13, 210, 394 |
| Cfr10I | RCCGGY | 3 cut(s) | 536, 659, 670 |
| Csp6I | GTAC | 3 cut(s) | 419, 442, 565 |
| CspAI | ACCGGT | 1 cut(s) | 536 |
| CviAII | CATG | 1 cut(s) | 248 |
| CviQI | GTAC | 3 cut(s) | 419, 442, 565 |
| DdeI | CTNAG | 2 cut(s) | 293, 299 |
| DpnI | GATC | 6 cut(s) | 260, 353, 410, 452, 544, 551 |
| DpnII | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| DraIII | CACNNNGTG | 1 cut(s) | 326 |
| EaeI | YGGCCR | 1 cut(s) | 528 |
| Eam1104I | CTCTTC | 1 cut(s) | 37 |
| EarI | CTCTTC | 1 cut(s) | 37 |
| Ecl136II | GAGCTC | 1 cut(s) | 655 |
| Eco130I | CCWWGG | 2 cut(s) | 145, 711 |
| Eco24I | GRGCYC | 2 cut(s) | 657, 726 |
| Eco31I | GGTCTC | 1 cut(s) | 66 |
| Eco53kI | GAGCTC | 1 cut(s) | 655 |
| Eco57I | CTGAAG | 1 cut(s) | 602 |
| Eco91I | GGTNACC | 1 cut(s) | 326 |
| EcoICRI | GAGCTC | 1 cut(s) | 655 |
| EcoO65I | GGTNACC | 1 cut(s) | 326 |
| EcoT14I | CCWWGG | 2 cut(s) | 145, 711 |
| EcoT38I | GRGCYC | 2 cut(s) | 657, 726 |
| ErhI | CCWWGG | 2 cut(s) | 145, 711 |
| FaeI | CATG | 1 cut(s) | 251 |
| FaiI | YATR | 7 cut(s) | 42, 249, 255, 289, 400, 477, 485 |
| FaqI | GGGAC | 1 cut(s) | 377 |
| FatI | CATG | 1 cut(s) | 247 |
| FauI | CCCGC | 1 cut(s) | 656 |
| Fnu4HI | GCNGC | 2 cut(s) | 280, 708 |
| FokI | GGATG | 1 cut(s) | 722 |
| FriOI | GRGCYC | 2 cut(s) | 657, 726 |
| Fsp4HI | GCNGC | 2 cut(s) | 280, 708 |
| GluI | GCNGC | 2 cut(s) | 280, 708 |
| GsaI | CCCAGC | 1 cut(s) | 287 |
| HaeIII | GGCC | 2 cut(s) | 530, 716 |
| HapII | CCGG | 4 cut(s) | 537, 660, 671, 704 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 251 |
| HincII | GTYRAC | 1 cut(s) | 316 |
| HindII | GTYRAC | 1 cut(s) | 316 |
| HinfI | GANTC | 2 cut(s) | 215, 297 |
| HpaII | CCGG | 4 cut(s) | 537, 660, 671, 704 |
| HphI | GGTGA | 5 cut(s) | 60, 334, 338, 649, 739 |
| Hpy166II | GTNNAC | 2 cut(s) | 316, 565 |
| Hpy188I | TCNGA | 3 cut(s) | 408, 470, 640 |
| Hpy188III | TCNNGA | 3 cut(s) | 172, 222, 239 |
| Hpy8I | GTNNAC | 2 cut(s) | 316, 565 |
| Hpy99I | CGWCG | 1 cut(s) | 685 |
| HpyAV | CCTTC | 3 cut(s) | 75, 81, 622 |
| HpyCH4III | ACNGT | 1 cut(s) | 90 |
| HpyCH4IV | ACGT | 2 cut(s) | 417, 617 |
| HpyCH4V | TGCA | 2 cut(s) | 11, 247 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 652, 713 |
| HpyF3I | CTNAG | 2 cut(s) | 293, 299 |
| HpySE526I | ACGT | 2 cut(s) | 417, 617 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 1 cut(s) | 251 |
| Kzo9I | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| LmnI | GCTCC | 3 cut(s) | 205, 497, 652 |
| Lsp1109I | GCAGC | 2 cut(s) | 291, 694 |
| MaeII | ACGT | 2 cut(s) | 417, 617 |
| MaeIII | GTNAC | 3 cut(s) | 326, 385, 532 |
| MalI | GATC | 6 cut(s) | 260, 353, 410, 452, 544, 551 |
| MboI | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| MboII | GAAGA | 4 cut(s) | 24, 178, 210, 439 |
| MflI | RGATCY | 3 cut(s) | 351, 542, 549 |
| MhlI | GDGCHC | 4 cut(s) | 179, 483, 657, 726 |
| MlyI | GAGTC | 1 cut(s) | 291 |
| MmeI | TCCRAC | 1 cut(s) | 72 |
| MnlI | CCTC | 5 cut(s) | 152, 269, 439, 508, 550 |
| MseI | TTAA | 1 cut(s) | 576 |
| MslI | CAYNNNNRTG | 1 cut(s) | 252 |
| MspA1I | CMGCKG | 1 cut(s) | 212 |
| MspI | CCGG | 4 cut(s) | 537, 660, 671, 704 |
| Mva1269I | GAATGC | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 652, 713 |
| NdeII | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| NlaIII | CATG | 1 cut(s) | 251 |
| NlaIV | GGNNCC | 3 cut(s) | 207, 499, 678 |
| NmuCI | GTSAC | 2 cut(s) | 326, 532 |
| NspI | RCATGY | 1 cut(s) | 251 |
| PctI | GAATGC | 1 cut(s) | 109 |
| PfeI | GAWTC | 1 cut(s) | 215 |
| PinAI | ACCGGT | 1 cut(s) | 536 |
| PkrI | GCNGC | 2 cut(s) | 281, 709 |
| PleI | GAGTC | 1 cut(s) | 291 |
| PpsI | GAGTC | 1 cut(s) | 291 |
| Psp124BI | GAGCTC | 1 cut(s) | 657 |
| PspEI | GGTNACC | 1 cut(s) | 326 |
| PspFI | CCCAGC | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 3 cut(s) | 207, 499, 678 |
| PsuI | RGATCY | 3 cut(s) | 351, 542, 549 |
| PvuII | CAGCTG | 1 cut(s) | 212 |
| RsaI | GTAC | 3 cut(s) | 420, 443, 566 |
| RsaNI | GTAC | 3 cut(s) | 419, 442, 565 |
| RseI | CAYNNNNRTG | 1 cut(s) | 252 |
| SacI | GAGCTC | 1 cut(s) | 657 |
| SaqAI | TTAA | 1 cut(s) | 576 |
| SatI | GCNGC | 2 cut(s) | 280, 708 |
| Sau3AI | GATC | 6 cut(s) | 258, 351, 408, 450, 542, 549 |
| SchI | GAGTC | 1 cut(s) | 291 |
| SduI | GDGCHC | 4 cut(s) | 179, 483, 657, 726 |
| SfcI | CTRYAG | 1 cut(s) | 454 |
| SgrAI | CRCCGGYG | 1 cut(s) | 659 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 252 |
| SmlI | CTYRAG | 1 cut(s) | 20 |
| SmoI | CTYRAG | 1 cut(s) | 20 |
| SsiI | CCGC | 1 cut(s) | 663 |
| SstI | GAGCTC | 1 cut(s) | 657 |
| StyI | CCWWGG | 2 cut(s) | 145, 711 |
| TaaI | ACNGT | 1 cut(s) | 90 |
| TaiI | ACGT | 2 cut(s) | 420, 620 |
| TfiI | GAWTC | 1 cut(s) | 215 |
| Tru1I | TTAA | 1 cut(s) | 576 |
| Tru9I | TTAA | 1 cut(s) | 576 |
| TseFI | GTSAC | 2 cut(s) | 326, 532 |
| TseI | GCWGC | 2 cut(s) | 279, 707 |
| Tsp45I | GTSAC | 2 cut(s) | 326, 532 |
| TspGWI | ACGGA | 2 cut(s) | 582, 669 |
| XceI | RCATGY | 1 cut(s) | 251 |