Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003258

Physical Location & Seq

Genomic Coordinates Reverse (-)

33339669 .. 33342593

Gene Structure 2925 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G362400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGAGAAGGGTTAATGGAGCCGCTTTGCTCAGCAGAGCCGTCGTCTGTATGGGTAGCTCCACCGCAGTCGGCGGCACAACTCAACAGCGGCTGGTTCAAGCTGCGATGTTGAGCACTTGCTCGAATTCGAATCCGCTGTGGTTCACACAAAGACTCGGCGATCACTTCGGCCTATCGAAACCCTATGTGGCCTGCGGTGCGGGAGGGCACGTGTGCTTCTCTTCGAACGCCACGCCTCTGGCTCAAGAGGTGCATGCCCAGGACAAGTTCCTCCCCAAGGACGTCGAGCTCTACCAGTACGAAGCTTGCCCCTTCTGCAACAAGGTTAGAGCATTCTTGGATTACTATAAAATTCCATACAAAGTTATGGAGGTTAACCCCATCAGCAAAAAGGAGATTAAATGGTCTGATTACAAGAAGGTGCCGATACTGAAAGTTGATGGTGAACAGATGGTTGATTCTTCAGTTATAATCGATAAGCTGTTCCAAAGGATCAATCCTGAGAACAATGTCGTAAATGGTGAAGAAGAAAAGAAGTGGCGTGGGTGGGTGGATAATCACTTGGTGCATGTTTTATCACCAAACATATATCGAACTGCTTCCGAGGCTCTCGAGTCATTTGACTATATCACCAGTCATGGAAATTTCAGTTTATATGAAAGGATAGTAGCAAAGTATACTGGAGCTGCGGCTATGTATTTTGTGTCTAAGAAACTGAAGAAGAAACACAATATCACCGATGAACGTGCAGCCTTGTATGAAGCCGCAGAGACCTGGGTGGATGCTCTTAAGGGGAGACAATTTCTTGGTGGGTCAAATCCTAATTTAGCCGATCTTGCTGCATTTGGTGTTTTGAGGCCCATTCGGCACCTTAAATCTGGCAAAGATATGGTGGAGAACACACGGATTGGTGAATGGTACACTCGAATGGAAAGTTCAGTGGGAGAGTCCGCTAGAATCGAGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0016829 GO:0020037 GO:0033218 GO:0042277 GO:0043167 GO:0043168 GO:0043295 GO:0046906 GO:0048037 GO:0072341 GO:0097159 GO:1900750 GO:1901363 GO:1901681

KEGG Pathways

Metabolic & Signaling

ko00590 ko01100 map00590 map01100

Pfam Domains

Protein Families

GST_C GST_N_3

Protein Analysis

323

Amino Acids

36.14

Weight (kDa)

8.85

Isoelectric Point (pI)

25.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42150
fragaria_vesca	FvH4_2g38150 FvH4_5g17390 FvH4_5g17390
malus_domestica	MD08G1010100.v1.1 MD14G1236600.v1.1
prunus_persica	Prupe.1G362400_v2.0.a1 Prupe.1G362400_v2.0.a1 Prupe.5G233700_v2.0.a1 Prupe.5G233700_v2.0.a1 Prupe.5G233700_v2.0.a1
pyrus_communis	pycom06g20360 pycom08g00850 pycom14g19760
rosa_chinensis	RchiOBHm_Chr6g0303331 RchiOBHm_Chr7g0178351
rosa_laevigata	RLG00000005453 RLG00000011091
rosa_multiflora	Rmu_sc0014842.1_g000009 Rmu_sc0028437.1_g000002 Rmu_ssc0000114.1_g000063
rosa_roxburghii	Rroxscaffold_3G00274990 Rroxscaffold_7G00164860
rosa_rugosa	Rorug06G0320600 Rorug06G0320700 Rorug06G0416200
rosa_samantha	Rh6AG434900 Rh6BG468200 Rh6CG447000 Rh6DG433800 Rh7AG015000 Rh7BG014500 Rh7CG014500 Rh7DG014800
rosa_wichuraiana	Rw0G010210 Rw6G037660 Rw7G001190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	470
AatII	GACGTC	1 cut(s)	285
AccB1I	GGYRCC	2 cut(s)	421, 867
AccI	GTMKAC	1 cut(s)	677
AclWI	GGATC	1 cut(s)	500
AcsI	RAATTY	3 cut(s)	124, 351, 643
AcuI	CTGAAG	2 cut(s)	447, 737
AcvI	CACGTG	1 cut(s)	211
AcyI	GRCGYC	1 cut(s)	282
AdeI	CACNNNGTG	1 cut(s)	565
AfaI	GTAC	2 cut(s)	299, 920
AfiI	CCNNNNNNNGG	1 cut(s)	277
AflII	CTTAAG	1 cut(s)	788
AflIII	ACRYGT	1 cut(s)	210
AgsI	TTSAA	1 cut(s)	98
AjnI	CCWGG	2 cut(s)	258, 773
AluBI	AGCT	6 cut(s)	57, 101, 289, 305, 481, 686
AluI	AGCT	6 cut(s)	57, 101, 289, 305, 481, 686
Alw21I	GWGCWC	2 cut(s)	116, 291
Alw26I	GTCTC	2 cut(s)	764, 790
AlwI	GGATC	1 cut(s)	500
AlwNI	CAGNNNCTG	1 cut(s)	91
Ama87I	CYCGRG	1 cut(s)	611
AoxI	GGCC	4 cut(s)	169, 189, 857, 963
ApeKI	GCWGC	4 cut(s)	101, 686, 749, 839
ApoI	RAATTY	3 cut(s)	124, 351, 643
Asp700I	GAANNNNTTC	1 cut(s)	598
AspS9I	GGNCC	1 cut(s)	858
AsuHPI	GGTGA	6 cut(s)	455, 533, 570, 622, 727, 923
AsuII	TTCGAA	2 cut(s)	128, 224
AvaI	CYCGRG	1 cut(s)	611
BaeGI	GKGCMC	1 cut(s)	210
BanI	GGYRCC	2 cut(s)	421, 867
BanII	GRGCYC	1 cut(s)	291
BbrPI	CACGTG	1 cut(s)	211
Bbv12I	GWGCWC	2 cut(s)	116, 291
BbvI	GCAGC	4 cut(s)	88, 673, 761, 826
BccI	CCATC	3 cut(s)	389, 434, 445
BceAI	ACGGC	1 cut(s)	23
BcgI	CGANNNNNNTGC	6 cut(s)	22, 56, 728, 762, 821, 855
BciT130I	CCWGG	2 cut(s)	260, 775
BcoDI	GTCTC	2 cut(s)	764, 790
BfaI	CTAG	1 cut(s)	954
BfrI	CTTAAG	1 cut(s)	788
BglI	GCCNNNNNGGC	1 cut(s)	865
BisI	GCNGC	9 cut(s)	21, 73, 89, 102, 687, 690, 750, 765, 840
BlpI	GCTNAGC	1 cut(s)	29
BlsI	GCNGC	9 cut(s)	22, 74, 90, 103, 688, 691, 751, 766, 841
Bme1390I	CCNGG	2 cut(s)	260, 775
BmeT110I	CYCGRG	1 cut(s)	611
BmgT120I	GGNCC	1 cut(s)	858
BmiI	GGNNCC	3 cut(s)	19, 423, 869
BmrFI	CCNGG	2 cut(s)	260, 775
BmsI	GCATC	1 cut(s)	772
BpmI	CTGGAG	1 cut(s)	702
Bpu1102I	GCTNAGC	1 cut(s)	29
Bpu14I	TTCGAA	2 cut(s)	128, 224
BpuEI	CTTGAG	1 cut(s)	228
Bsa29I	ATCGAT	1 cut(s)	474
BsaAI	YACGTR	1 cut(s)	211
BsaHI	GRCGYC	1 cut(s)	282
BsaI	GGTCTC	1 cut(s)	764
BsaJI	CCNNGG	4 cut(s)	258, 276, 603, 774
BsaXI	ACNNNNNCTCC	2 cut(s)	195, 225
Bsc4I	CCNNNNNNNGG	1 cut(s)	277
Bse1I	ACTGG	3 cut(s)	295, 633, 685
BseBI	CCWGG	2 cut(s)	260, 775
BseCI	ATCGAT	1 cut(s)	474
BseDI	CCNNGG	4 cut(s)	258, 276, 603, 774
BseGI	GGATG	1 cut(s)	787
BseLI	CCNNNNNNNGG	1 cut(s)	277
BseMII	CTCAG	2 cut(s)	43, 492
BseNI	ACTGG	3 cut(s)	295, 633, 685
BseSI	GKGCMC	1 cut(s)	210
BseXI	GCAGC	4 cut(s)	88, 673, 761, 826
BsgI	GTGCAG	1 cut(s)	768
BshFI	GGCC	4 cut(s)	171, 191, 859, 965
BshNI	GGYRCC	2 cut(s)	421, 867
BshVI	ATCGAT	1 cut(s)	474
BsiHKAI	GWGCWC	2 cut(s)	116, 291
BsiHKCI	CYCGRG	1 cut(s)	611
BslI	CCNNNNNNNGG	1 cut(s)	277
BsmAI	GTCTC	2 cut(s)	764, 790
BsmI	GAATGC	1 cut(s)	332
BsnI	GGCC	4 cut(s)	171, 191, 859, 965
Bso31I	GGTCTC	1 cut(s)	764
BsoBI	CYCGRG	1 cut(s)	611
Bsp119I	TTCGAA	2 cut(s)	128, 224
Bsp1286I	GDGCHC	3 cut(s)	116, 210, 291
Bsp143I	GATC	3 cut(s)	160, 492, 832
Bsp1720I	GCTNAGC	1 cut(s)	29
BspANI	GGCC	4 cut(s)	171, 191, 859, 965
BspCNI	CTCAG	2 cut(s)	42, 493
BspDI	ATCGAT	1 cut(s)	474
BspLI	GGNNCC	3 cut(s)	19, 423, 869
BspPI	GGATC	1 cut(s)	500
BspT104I	TTCGAA	2 cut(s)	128, 224
BspT107I	GGYRCC	2 cut(s)	421, 867
BspTI	CTTAAG	1 cut(s)	788
BspTNI	GGTCTC	1 cut(s)	764
BsrI	ACTGG	3 cut(s)	295, 633, 685
BssECI	CCNNGG	4 cut(s)	258, 276, 603, 774
BssMI	GATC	3 cut(s)	160, 492, 832
BssNAI	GTATAC	1 cut(s)	678
BssNI	GRCGYC	1 cut(s)	282
BssT1I	CCWWGG	1 cut(s)	276
Bst1107I	GTATAC	1 cut(s)	678
Bst2UI	CCWGG	2 cut(s)	260, 775
Bst6I	CTCTTC	1 cut(s)	226
BstACI	GRCGYC	1 cut(s)	282
BstAFI	CTTAAG	1 cut(s)	788
BstBAI	YACGTR	1 cut(s)	211
BstBI	TTCGAA	2 cut(s)	128, 224
BstC8I	GCNNGC	3 cut(s)	193, 255, 307
BstDEI	CTNAG	3 cut(s)	29, 501, 708
BstENI	CCTNNNNNAGG	1 cut(s)	275
BstF5I	GGATG	1 cut(s)	787
BstKTI	GATC	3 cut(s)	163, 495, 835
BstMAI	GTCTC	2 cut(s)	764, 790
BstMBI	GATC	3 cut(s)	160, 492, 832
BstMWI	GCNNNNNNNGC	5 cut(s)	197, 315, 605, 836, 865
BstNI	CCWGG	2 cut(s)	260, 775
BstNSI	RCATGY	2 cut(s)	257, 572
BstSCI	CCNGG	2 cut(s)	258, 773
BstSLI	GKGCMC	1 cut(s)	210
BstV1I	GCAGC	4 cut(s)	88, 673, 761, 826
BstXI	CCANNNNNNTGG	1 cut(s)	238
BstZ17I	GTATAC	1 cut(s)	678
Bsu15I	ATCGAT	1 cut(s)	474
BsuRI	GGCC	4 cut(s)	171, 191, 859, 965
BsuTUI	ATCGAT	1 cut(s)	474
BtgZI	GCGATG	1 cut(s)	119
BtsCI	GGATG	1 cut(s)	787
BtsIMutI	CAGTG	1 cut(s)	945
Cac8I	GCNNGC	3 cut(s)	193, 255, 307
CaiI	CAGNNNCTG	1 cut(s)	91
Cfr13I	GGNCC	1 cut(s)	858
ClaI	ATCGAT	1 cut(s)	474
Csp6I	GTAC	2 cut(s)	298, 919
CviAII	CATG	3 cut(s)	254, 569, 638
CviQI	GTAC	2 cut(s)	298, 919
DdeI	CTNAG	3 cut(s)	29, 501, 708
DpnI	GATC	3 cut(s)	162, 494, 834
DpnII	GATC	3 cut(s)	160, 492, 832
DraIII	CACNNNGTG	1 cut(s)	565
Eam1104I	CTCTTC	1 cut(s)	226
EarI	CTCTTC	1 cut(s)	226
Ecl136II	GAGCTC	1 cut(s)	289
Eco130I	CCWWGG	1 cut(s)	276
Eco147I	AGGCCT	1 cut(s)	965
Eco24I	GRGCYC	1 cut(s)	291
Eco31I	GGTCTC	1 cut(s)	764
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	2 cut(s)	447, 737
Eco72I	CACGTG	1 cut(s)	211
Eco88I	CYCGRG	1 cut(s)	611
EcoICRI	GAGCTC	1 cut(s)	289
EcoNI	CCTNNNNNAGG	1 cut(s)	275
EcoRI	GAATTC	1 cut(s)	124
EcoRII	CCWGG	2 cut(s)	258, 773
EcoT14I	CCWWGG	1 cut(s)	276
EcoT38I	GRGCYC	1 cut(s)	291
ErhI	CCWWGG	1 cut(s)	276
FaeI	CATG	3 cut(s)	257, 572, 641
FatI	CATG	3 cut(s)	253, 568, 637
FauI	CCCGC	1 cut(s)	193
FblI	GTMKAC	1 cut(s)	677
Fnu4HI	GCNGC	9 cut(s)	21, 73, 89, 102, 687, 690, 750, 765, 840
FokI	GGATG	1 cut(s)	794
FriOI	GRGCYC	1 cut(s)	291
Fsp4HI	GCNGC	9 cut(s)	21, 73, 89, 102, 687, 690, 750, 765, 840
FspBI	CTAG	1 cut(s)	954
GluI	GCNGC	9 cut(s)	21, 73, 89, 102, 687, 690, 750, 765, 840
GsuI	CTGGAG	1 cut(s)	702
HaeIII	GGCC	4 cut(s)	171, 191, 859, 965
Hin1I	GRCGYC	1 cut(s)	282
Hin1II	CATG	3 cut(s)	257, 572, 641
HincII	GTYRAC	1 cut(s)	376
HindII	GTYRAC	1 cut(s)	376
HindIII	AAGCTT	1 cut(s)	303
HinfI	GANTC	6 cut(s)	130, 153, 458, 614, 947, 957
HpaI	GTTAAC	1 cut(s)	376
HphI	GGTGA	6 cut(s)	455, 533, 570, 622, 727, 923
Hpy166II	GTNNAC	5 cut(s)	144, 376, 446, 678, 921
Hpy188I	TCNGA	2 cut(s)	409, 604
Hpy188III	TCNNGA	3 cut(s)	245, 500, 611
Hpy8I	GTNNAC	5 cut(s)	144, 376, 446, 678, 921
Hpy99I	CGWCG	2 cut(s)	44, 287
HpyAV	CCTTC	2 cut(s)	322, 412
HpyCH4IV	ACGT	3 cut(s)	210, 282, 745
HpyCH4V	TGCA	5 cut(s)	253, 318, 568, 749, 842
HpyF10VI	GCNNNNNNNGC	5 cut(s)	197, 315, 605, 836, 865
HpyF3I	CTNAG	3 cut(s)	29, 501, 708
HpySE526I	ACGT	3 cut(s)	210, 282, 745
Hsp92I	GRCGYC	1 cut(s)	282
Hsp92II	CATG	3 cut(s)	257, 572, 641
KspAI	GTTAAC	1 cut(s)	376
Kzo9I	GATC	3 cut(s)	160, 492, 832
LmnI	GCTCC	3 cut(s)	17, 62, 683
Lsp1109I	GCAGC	4 cut(s)	88, 673, 761, 826
LweI	GCATC	1 cut(s)	772
MaeI	CTAG	1 cut(s)	954
MaeII	ACGT	3 cut(s)	210, 282, 745
MalI	GATC	3 cut(s)	162, 494, 834
MboI	GATC	3 cut(s)	160, 492, 832
MboII	GAAGA	6 cut(s)	213, 453, 536, 539, 730, 733
MhlI	GDGCHC	3 cut(s)	116, 210, 291
MluCI	AATT	5 cut(s)	124, 351, 643, 800, 823
MlyI	GAGTC	3 cut(s)	147, 623, 956
MnlI	CCTC	8 cut(s)	197, 241, 246, 281, 364, 598, 849, 955
MroXI	GAANNNNTTC	1 cut(s)	598
MseI	TTAA	5 cut(s)	12, 375, 399, 789, 873
MslI	CAYNNNNRTG	1 cut(s)	926
MspA1I	CMGCKG	2 cut(s)	88, 136
MspCI	CTTAAG	1 cut(s)	788
MspR9I	CCNGG	2 cut(s)	260, 775
Mva1269I	GAATGC	1 cut(s)	332
MvaI	CCWGG	2 cut(s)	260, 775
MwoI	GCNNNNNNNGC	5 cut(s)	197, 315, 605, 836, 865
NdeII	GATC	3 cut(s)	160, 492, 832
NlaIII	CATG	3 cut(s)	257, 572, 641
NlaIV	GGNNCC	3 cut(s)	19, 423, 869
NmeAIII	GCCGAG	1 cut(s)	135
NspI	RCATGY	2 cut(s)	257, 572
NspV	TTCGAA	2 cut(s)	128, 224
PaeI	GCATGC	1 cut(s)	257
PaeR7I	CTCGAG	1 cut(s)	611
PceI	AGGCCT	1 cut(s)	965
PctI	GAATGC	1 cut(s)	332
PdmI	GAANNNNTTC	1 cut(s)	598
PfeI	GAWTC	3 cut(s)	130, 458, 957
PkrI	GCNGC	9 cut(s)	22, 74, 90, 103, 688, 691, 751, 766, 841
PleI	GAGTC	3 cut(s)	147, 622, 955
PmaCI	CACGTG	1 cut(s)	211
PmlI	CACGTG	1 cut(s)	211
PpsI	GAGTC	3 cut(s)	147, 622, 955
Ppu21I	YACGTR	1 cut(s)	211
PsiI	TTATAA	1 cut(s)	470
Psp124BI	GAGCTC	1 cut(s)	291
Psp6I	CCWGG	2 cut(s)	258, 773
PspCI	CACGTG	1 cut(s)	211
PspGI	CCWGG	2 cut(s)	258, 773
PspN4I	GGNNCC	3 cut(s)	19, 423, 869
PspPI	GGNCC	1 cut(s)	858
PstNI	CAGNNNCTG	1 cut(s)	91
RsaI	GTAC	2 cut(s)	299, 920
RsaNI	GTAC	2 cut(s)	298, 919
RseI	CAYNNNNRTG	1 cut(s)	926
SacI	GAGCTC	1 cut(s)	291
SaqAI	TTAA	5 cut(s)	12, 375, 399, 789, 873
SatI	GCNGC	9 cut(s)	21, 73, 89, 102, 687, 690, 750, 765, 840
Sau3AI	GATC	3 cut(s)	160, 492, 832
Sau96I	GGNCC	1 cut(s)	858
SchI	GAGTC	3 cut(s)	147, 623, 956
ScrFI	CCNGG	2 cut(s)	260, 775
SduI	GDGCHC	3 cut(s)	116, 210, 291
SfaNI	GCATC	1 cut(s)	772
Sfr274I	CTCGAG	1 cut(s)	611
SfuI	TTCGAA	2 cut(s)	128, 224
SlaI	CTCGAG	1 cut(s)	611
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	3 cut(s)	243, 611, 788
SmoI	CTYRAG	3 cut(s)	243, 611, 788
SphI	GCATGC	1 cut(s)	257
Sse9I	AATT	5 cut(s)	124, 351, 643, 800, 823
SseBI	AGGCCT	1 cut(s)	965
SspMI	CTAG	1 cut(s)	954
SstI	GAGCTC	1 cut(s)	291
StuI	AGGCCT	1 cut(s)	965
StyD4I	CCNGG	2 cut(s)	258, 773
StyI	CCWWGG	1 cut(s)	276
TaiI	ACGT	3 cut(s)	213, 285, 748
TasI	AATT	5 cut(s)	124, 351, 643, 800, 823
TauI	GCSGC	5 cut(s)	23, 75, 91, 692, 767
TfiI	GAWTC	3 cut(s)	130, 458, 957
Tru1I	TTAA	5 cut(s)	12, 375, 399, 789, 873
Tru9I	TTAA	5 cut(s)	12, 375, 399, 789, 873
TscAI	CASTG	1 cut(s)	945
TseI	GCWGC	4 cut(s)	101, 686, 749, 839
TspDTI	ATGAA	3 cut(s)	672, 756, 774
TspGWI	ACGGA	1 cut(s)	919
TspRI	CASTG	1 cut(s)	945
Vha464I	CTTAAG	1 cut(s)	788
XagI	CCTNNNNNAGG	1 cut(s)	275
XapI	RAATTY	3 cut(s)	124, 351, 643
XceI	RCATGY	2 cut(s)	257, 572
XhoI	CTCGAG	1 cut(s)	611
XmiI	GTMKAC	1 cut(s)	677
XmnI	GAANNNNTTC	1 cut(s)	598
XspI	CTAG	1 cut(s)	954
ZraI	GACGTC	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.