Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003258

Physical Location & Seq

Genomic Coordinates Reverse (-)

47233694 .. 47237382

Gene Structure 3689 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0320600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGTCTTCTGCCAGAAATACCATGACCGGCATGGACAGTGAGAGCATCAAGAAATACTTGTTCCAGACAGCCATGAAAAGCCAATGGGAAGAAGTTGTCCGAGCATATAGGCAAAACGAGCGGGCTCACAAGGCAAGGATCACCAAGTCAGGTGACACAGCATTGCACATAGCAGTGTTAGATGGCCAAGAGGAACGTGTTGAAGAACTAGTAAACCTGGTTTCCAAAAAGGAGCTGGCGCTGGAAATCCAAAATGAGCGAGGGAACACCCCTCTCCATTTGGCTGCAGCACAGGGGAATGTGAGAATGTGCGAATGCATTGCCAAAGGTCGTGCTTCTTTGGTTGGTATTCTCAACAAAGATAAAGAGACCCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGTCTCCACTACATTTGTAGTACTCCTGACAAGTCTCATCCAAACTACAATTACTGTAGGAGGGGTGATGGGGAGACTATATTGCACTGTACAATTGCTGGGGAATACTATGATTTAGCATTTCAGATAATTGCCCTGTACAAAGATCTGGTAAATTCGGTTAAAGAAGGTGGGTTTTCCCCTCTCCATCTTCTGGCGAGTCAGCCTTCCGCCTTCAGAAGTGGGAGCCACCTTAGCCTTTGGAACAGAATCATTTATAACTGTATATTGGTCGATAAGCTGAAGGTGGAAGAAGAACGTCACTTCCGTCAGCGGGTAATTAATACAATTAACTCTGAAAAGGCTCCGAAGTACCCAGAAAACTACAAAACCTGCATCAACTTCTTGCTAGTGATCTGGAAGATGGCTCAAGCATTAGGAAAAGGATCTACAGATCCAAAGAACCCTGAACCTAAAGGAGGAAATCCAGGTGATTGCAATGCCTGTTTTGATTATGTAGATCCAGAGAACCCTGAACCTAAAGGAGGAAATCCAGGTGATTGCAATGCCTGTTTTGATTATGTAGATCCAGAGAACCCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTCAAGCTTTTATCAAAGGCAATGCTGATTGTTCTTGGACTAGGGTCTACGGAGATACGGAAGATAAGGAACAAGAAAGAAAAGCACAAATGGGCTGTTCAGATCATGGACAAGCTACTAGAAAGTGCTTCGATGTATGAATATGAAGACAGTGGCGGTATGAACCCGCAGGCAGCAACAACTAATGAAACAAGGCCTTACAAAATTTCTGATGGTGGCCACCATATCACCCTTGGAGACATATTTGAAGTACCAGGAGTCATTGGAGAAGGTAATTACTTTGGAAGCATTGAAGTACCAAAAGGAGTCATTGGAGAAGGGTCATTGCCGCCAGAAATGACACAGAATAAAACCCCTGAGATGGAAAAGACGGAAACACCGATATTGATTGCTTCTAAGAATGGTGTGATTGAAATGGTGGAAAAAATCCTTGAATTATTCCCAATGGCCATCCACGACGTTGACTCAAAGGACAAGAATATTGTGTTGTTGGCTGTGGAGAACAAGCAAACCAATGTGTACCAACTGTTACTAAACAGCGGTCATCTGATGAAAGATAGGGAGTTCGGTAAAGTGGATATTGATTGGAATAGTGCGTTACACCTCGCAGCGAGGTTGGGAAACAATAAGCCTTGGCTAATTGTTGGCCCTGCCCTGCAGATGCAATGGGAAGTCAAATGGTTTGAGTACGTGAAAAACTCCATGGCAGCCCACTCCTTCTTCCGCTACAATAGGGATAACAAGACTGCAGAGGACATCTTCACCGAATCCCACAATGAACTCGTCCAAGAAGGGGTGAAGTGGCTCTCCAAGACCTCCGAGTCCTGCTCCCTTATCGCCTCCCTTATCGCCACCGTGTCCTTTGCTACAGCAACCACCATTCCCGGCGGCATCAAAGACGAATCTGGAAGACCAATCCTGGCAAACCAGCCAGCCTTTGAAGTGTTTGCTGTATCATCACTTGTTGCCCTCTGCTTATCAGCGACGTCTATGTTTATATTCCTGTCCATCCTCTTGTCCCGATGCCAACAGAAGGACTTTGCATTGGAAGTGCCTTGGAAGCTTTTGCTGGGCCTGAGTTCGCTCTTCGTGTCCATGGTTTCCATGATGGTTTCTTTTTGCGCCGGGCATTTCTTTATGCTTAAAGATAAGCTCGGACAGGCTGCGCTGCCGGTTTATGTAATGACGTGCTTCCCTGTAGCCTATTTTGTTGTAACGCAGTTTCCACTGTATATACATCTCATTAGGGCTAACTTTAGCAAGGTTCCTTTACAAAGCACTGCTACGGATCCGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0016829 GO:0020037 GO:0033218 GO:0042277 GO:0043167 GO:0043168 GO:0043295 GO:0046906 GO:0048037 GO:0072341 GO:0097159 GO:1900750 GO:1901363 GO:1901681

KEGG Pathways

Metabolic & Signaling

ko00590 ko01100 map00590 map01100

Pfam Domains

Protein Families

GST_C GST_N_3

Protein Analysis

780

Amino Acids

86.98

Weight (kDa)

6.42

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	73 - 140	3.8e-07	Ankyrin repeats (3 copies)
PGG	PF13962	615 - 727	6.6e-26	Domain of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003258)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42150
fragaria_vesca	FvH4_2g38150 FvH4_5g17390 FvH4_5g17390
malus_domestica	MD08G1010100.v1.1 MD14G1236600.v1.1
prunus_persica	Prupe.1G362400_v2.0.a1 Prupe.1G362400_v2.0.a1 Prupe.5G233700_v2.0.a1 Prupe.5G233700_v2.0.a1 Prupe.5G233700_v2.0.a1
pyrus_communis	pycom06g20360 pycom08g00850 pycom14g19760
rosa_chinensis	RchiOBHm_Chr6g0303331 RchiOBHm_Chr7g0178351
rosa_laevigata	RLG00000005453 RLG00000011091
rosa_multiflora	Rmu_sc0014842.1_g000009 Rmu_sc0028437.1_g000002 Rmu_ssc0000114.1_g000063
rosa_roxburghii	Rroxscaffold_3G00274990 Rroxscaffold_7G00164860
rosa_rugosa	Rorug06G0320600 Rorug06G0320700 Rorug06G0416200
rosa_samantha	Rh6AG434900 Rh6BG468200 Rh6CG447000 Rh6DG433800 Rh7AG015000 Rh7BG014500 Rh7CG014500 Rh7DG014800
rosa_wichuraiana	Rw0G010210 Rw6G037660 Rw7G001190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	675
AasI	GACNNNNNNGTC	1 cut(s)	1864
AatII	GACGTC	1 cut(s)	2033
Acc36I	ACCTGC	1 cut(s)	797
AccB7I	CCANNNNNTGG	1 cut(s)	610
AccBSI	CCGCTC	1 cut(s)	121
AccI	GTMKAC	1 cut(s)	1091
AclWI	GGATC	7 cut(s)	146, 845, 850, 911, 977, 2327, 2340
AcoI	YGGCCR	3 cut(s)	184, 1261, 1491
AcsI	RAATTY	2 cut(s)	571, 1248
AcuI	CTGAAG	2 cut(s)	616, 719
AcyI	GRCGYC	1 cut(s)	2030
AfaI	GTAC	8 cut(s)	439, 508, 557, 770, 1296, 1341, 1565, 1733
AfiI	CCNNNNNNNGG	8 cut(s)	610, 730, 875, 941, 1007, 1405, 1837, 2077
AflIII	ACRYGT	1 cut(s)	196
AgsI	TTSAA	6 cut(s)	203, 1292, 1337, 1457, 1478, 1985
AhlI	ACTAGT	1 cut(s)	208
AjiI	CACGTC	1 cut(s)	2232
AjnI	CCWGG	6 cut(s)	216, 883, 949, 1015, 1297, 1962
AloI	GAACNNNNNNTCC	2 cut(s)	705, 737
AluBI	AGCT	6 cut(s)	235, 697, 1051, 1159, 2107, 2197
AluI	AGCT	6 cut(s)	235, 697, 1051, 1159, 2107, 2197
Alw26I	GTCTC	5 cut(s)	362, 425, 456, 485, 1275
AlwI	GGATC	7 cut(s)	146, 845, 850, 911, 977, 2327, 2340
AoxI	GGCC	6 cut(s)	184, 1238, 1261, 1491, 1690, 2116
ApeKI	GCWGC	8 cut(s)	284, 287, 386, 1217, 1652, 1751, 2207, 2212
ApoI	RAATTY	2 cut(s)	571, 1248
AseI	ATTAAT	1 cut(s)	738
AspLEI	GCGC	3 cut(s)	241, 2168, 2212
AspS9I	GGNCC	2 cut(s)	1691, 2116
AsuC2I	CCSGG	2 cut(s)	1929, 2170
AsuHPI	GGTGA	8 cut(s)	133, 164, 494, 899, 965, 1264, 1798, 1852
BalI	TGGCCA	3 cut(s)	186, 1263, 1493
BamHI	GGATCC	1 cut(s)	2332
BanII	GRGCYC	1 cut(s)	127
BbsI	GAAGAC	2 cut(s)	1197, 1960
BbvI	GCAGC	8 cut(s)	271, 299, 373, 1229, 1664, 1763, 2194, 2199
BccI	CCATC	9 cut(s)	176, 479, 612, 814, 1250, 1399, 1502, 2060, 2146
BcgI	CGANNNNNNTGC	2 cut(s)	302, 336
BciT130I	CCWGG	6 cut(s)	218, 885, 951, 1017, 1299, 1964
BcnI	CCSGG	2 cut(s)	1929, 2170
BcoDI	GTCTC	5 cut(s)	362, 425, 456, 485, 1275
BcuI	ACTAGT	1 cut(s)	208
BfaI	CTAG	4 cut(s)	209, 806, 1085, 1163
BfmI	CTRYAG	7 cut(s)	285, 472, 846, 1700, 1791, 1911, 2241
BfoI	RGCGCY	1 cut(s)	242
BfuAI	ACCTGC	1 cut(s)	797
BglII	AGATCT	1 cut(s)	562
BmcAI	AGTACT	1 cut(s)	439
Bme1390I	CCNGG	8 cut(s)	218, 885, 951, 1017, 1299, 1929, 1964, 2170
BmgBI	CACGTC	1 cut(s)	2232
BmgT120I	GGNCC	2 cut(s)	1691, 2116
BmiI	GGNNCC	4 cut(s)	644, 762, 2310, 2334
BmrFI	CCNGG	8 cut(s)	218, 885, 951, 1017, 1299, 1929, 1964, 2170
BmsI	GCATC	6 cut(s)	54, 397, 801, 1695, 1944, 2057
BoxI	GACNNNNGTC	1 cut(s)	1087
BpiI	GAAGAC	2 cut(s)	1197, 1960
BplI	GAGNNNNNCTC	2 cut(s)	1856, 1888
Bpu10I	CCTNAGC	1 cut(s)	650
BpuEI	CTTGAG	1 cut(s)	810
BpuMI	CCSGG	2 cut(s)	1929, 2170
BsaAI	YACGTR	1 cut(s)	1735
BsaHI	GRCGYC	1 cut(s)	2030
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
Bsc4I	CCNNNNNNNGG	8 cut(s)	610, 730, 875, 941, 1007, 1405, 1837, 2077
Bse118I	RCCGGY	2 cut(s)	26, 2215
Bse3DI	GCAATG	7 cut(s)	161, 318, 901, 967, 1071, 1367, 1715
BseBI	CCWGG	6 cut(s)	218, 885, 951, 1017, 1299, 1964
BseDI	CCNNGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
BseGI	GGATG	3 cut(s)	454, 1494, 2052
BseLI	CCNNNNNNNGG	8 cut(s)	610, 730, 875, 941, 1007, 1405, 1837, 2077
BseMI	GCAATG	7 cut(s)	161, 318, 901, 967, 1071, 1367, 1715
BseMII	CTCAG	2 cut(s)	1392, 2111
BseXI	GCAGC	8 cut(s)	271, 299, 373, 1229, 1664, 1763, 2194, 2199
BseYI	CCCAGC	2 cut(s)	515, 2113
BshFI	GGCC	6 cut(s)	186, 1240, 1263, 1493, 1692, 2118
BsiSI	CCGG	4 cut(s)	27, 1929, 2169, 2216
BslFI	GGGAC	1 cut(s)	2047
BslI	CCNNNNNNNGG	8 cut(s)	610, 730, 875, 941, 1007, 1405, 1837, 2077
BsmAI	GTCTC	5 cut(s)	362, 425, 456, 485, 1275
BsmFI	GGGAC	1 cut(s)	2047
BsmI	GAATGC	1 cut(s)	320
BsnI	GGCC	6 cut(s)	186, 1240, 1263, 1493, 1692, 2118
Bso31I	GGTCTC	1 cut(s)	362
Bsp1286I	GDGCHC	1 cut(s)	127
Bsp1407I	TGTACA	2 cut(s)	506, 555
Bsp143I	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
Bsp19I	CCATGG	3 cut(s)	394, 1746, 2139
BspANI	GGCC	6 cut(s)	186, 1240, 1263, 1493, 1692, 2118
BspCNI	CTCAG	2 cut(s)	1393, 2112
BspLI	GGNNCC	4 cut(s)	644, 762, 2310, 2334
BspMAI	CTGCAG	3 cut(s)	289, 1704, 1795
BspMI	ACCTGC	1 cut(s)	797
BspPI	GGATC	7 cut(s)	146, 845, 850, 911, 977, 2327, 2340
BspQI	GCTCTTC	1 cut(s)	2135
BspTNI	GGTCTC	1 cut(s)	362
BsrBI	CCGCTC	1 cut(s)	121
BsrDI	GCAATG	7 cut(s)	161, 318, 901, 967, 1071, 1367, 1715
BsrFI	RCCGGY	2 cut(s)	26, 2215
BsrGI	TGTACA	2 cut(s)	506, 555
BssAI	RCCGGY	2 cut(s)	26, 2215
BssECI	CCNNGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
BssMI	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
BssNI	GRCGYC	1 cut(s)	2030
BssT1I	CCWWGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
Bst2UI	CCWGG	6 cut(s)	218, 885, 951, 1017, 1299, 1964
Bst4CI	ACNGT	8 cut(s)	38, 473, 506, 680, 1196, 1572, 1900, 2274
Bst6I	CTCTTC	2 cut(s)	383, 2135
BstACI	GRCGYC	1 cut(s)	2030
BstAUI	TGTACA	2 cut(s)	506, 555
BstBAI	YACGTR	1 cut(s)	1735
BstC8I	GCNNGC	5 cut(s)	123, 237, 1033, 1215, 1977
BstDEI	CTNAG	4 cut(s)	650, 1401, 1440, 2120
BstDSI	CCRYGG	3 cut(s)	394, 1746, 2139
BstENI	CCTNNNNNAGG	3 cut(s)	873, 939, 1005
BstF5I	GGATG	3 cut(s)	454, 1494, 2052
BstH2I	RGCGCY	1 cut(s)	242
BstHHI	GCGC	3 cut(s)	241, 2168, 2212
BstKTI	GATC	9 cut(s)	141, 565, 813, 845, 853, 919, 985, 1149, 2335
BstMAI	GTCTC	5 cut(s)	362, 425, 456, 485, 1275
BstMBI	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
BstMWI	GCNNNNNNNGC	4 cut(s)	118, 131, 651, 2104
BstNI	CCWGG	6 cut(s)	218, 885, 951, 1017, 1299, 1964
BstPAI	GACNNNNGTC	1 cut(s)	1087
BstSCI	CCNGG	8 cut(s)	216, 883, 949, 1015, 1297, 1927, 1962, 2168
BstSFI	CTRYAG	7 cut(s)	285, 472, 846, 1700, 1791, 1911, 2241
BstV1I	GCAGC	8 cut(s)	271, 299, 373, 1229, 1664, 1763, 2194, 2199
BstV2I	GAAGAC	2 cut(s)	1197, 1960
BstX2I	RGATCY	6 cut(s)	562, 842, 850, 916, 982, 2332
BstYI	RGATCY	6 cut(s)	562, 842, 850, 916, 982, 2332
BsuRI	GGCC	6 cut(s)	186, 1240, 1263, 1493, 1692, 2118
BtgI	CCRYGG	3 cut(s)	394, 1746, 2139
BtrI	CACGTC	1 cut(s)	2232
BtsCI	GGATG	3 cut(s)	454, 1494, 2052
BtsI	GCAGTG	2 cut(s)	180, 2322
BtsIMutI	CAGTG	6 cut(s)	43, 180, 502, 1201, 2270, 2322
BveI	ACCTGC	1 cut(s)	797
Cac8I	GCNNGC	5 cut(s)	123, 237, 1033, 1215, 1977
CfoI	GCGC	3 cut(s)	241, 2168, 2212
Cfr10I	RCCGGY	2 cut(s)	26, 2215
Cfr13I	GGNCC	2 cut(s)	1691, 2116
CsiI	ACCWGGT	1 cut(s)	216
Csp6I	GTAC	8 cut(s)	438, 507, 556, 769, 1295, 1340, 1564, 1732
CspCI	CAANNNNNGTGG	2 cut(s)	413, 448
CviAII	CATG	8 cut(s)	22, 31, 73, 395, 1150, 1747, 2140, 2149
CviQI	GTAC	8 cut(s)	438, 507, 556, 769, 1295, 1340, 1564, 1732
DdeI	CTNAG	4 cut(s)	650, 1401, 1440, 2120
DpnI	GATC	9 cut(s)	140, 564, 812, 844, 852, 918, 984, 1148, 2334
DpnII	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
DrdI	GACNNNNNNGTC	1 cut(s)	1864
DseDI	GACNNNNNNGTC	1 cut(s)	1864
EaeI	YGGCCR	3 cut(s)	184, 1261, 1491
Eam1104I	CTCTTC	2 cut(s)	383, 2135
EarI	CTCTTC	2 cut(s)	383, 2135
EciI	GGCGGA	1 cut(s)	616
Eco130I	CCWWGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
Eco147I	AGGCCT	1 cut(s)	1240
Eco24I	GRGCYC	1 cut(s)	127
Eco31I	GGTCTC	1 cut(s)	362
Eco57I	CTGAAG	2 cut(s)	616, 719
EcoNI	CCTNNNNNAGG	3 cut(s)	873, 939, 1005
EcoRII	CCWGG	6 cut(s)	216, 883, 949, 1015, 1297, 1962
EcoT14I	CCWWGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
EcoT22I	ATGCAT	1 cut(s)	320
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
FaeI	CATG	8 cut(s)	25, 34, 76, 398, 1153, 1750, 2143, 2152
FalI	AAGNNNNNCTT	2 cut(s)	41, 73
FaqI	GGGAC	1 cut(s)	2047
FatI	CATG	8 cut(s)	21, 30, 72, 394, 1149, 1746, 2139, 2148
FauI	CCCGC	3 cut(s)	114, 723, 1218
FblI	GTMKAC	1 cut(s)	1091
FokI	GGATG	3 cut(s)	441, 1481, 2039
FriOI	GRGCYC	1 cut(s)	127
FspBI	CTAG	4 cut(s)	209, 806, 1085, 1163
GlaI	GCGC	3 cut(s)	240, 2167, 2211
GsaI	CCCAGC	2 cut(s)	519, 2117
HaeII	RGCGCY	1 cut(s)	242
HaeIII	GGCC	6 cut(s)	186, 1240, 1263, 1493, 1692, 2118
HapII	CCGG	4 cut(s)	27, 1929, 2169, 2216
HhaI	GCGC	3 cut(s)	241, 2168, 2212
Hin1I	GRCGYC	1 cut(s)	2030
Hin1II	CATG	8 cut(s)	25, 34, 76, 398, 1153, 1750, 2143, 2152
Hin6I	GCGC	3 cut(s)	239, 2166, 2210
HinP1I	GCGC	3 cut(s)	239, 2166, 2210
HincII	GTYRAC	1 cut(s)	1507
HindII	GTYRAC	1 cut(s)	1507
HindIII	AAGCTT	2 cut(s)	1049, 2105
HinfI	GANTC	8 cut(s)	616, 666, 1302, 1350, 1508, 1811, 1865, 1946
HpaII	CCGG	4 cut(s)	27, 1929, 2169, 2216
HphI	GGTGA	8 cut(s)	133, 164, 494, 899, 965, 1264, 1798, 1852
Hpy166II	GTNNAC	4 cut(s)	214, 1092, 1507, 1564
Hpy188III	TCNNGA	8 cut(s)	49, 64, 443, 814, 920, 986, 1950, 2064
Hpy8I	GTNNAC	4 cut(s)	214, 1092, 1507, 1564
Hpy99I	CGWCG	2 cut(s)	1505, 2032
HpyCH4III	ACNGT	8 cut(s)	38, 473, 506, 680, 1196, 1572, 1900, 2274
HpyCH4IV	ACGT	6 cut(s)	196, 715, 1503, 1734, 2030, 2231
HpyF10VI	GCNNNNNNNGC	4 cut(s)	118, 131, 651, 2104
HpyF3I	CTNAG	4 cut(s)	650, 1401, 1440, 2120
HpySE526I	ACGT	6 cut(s)	196, 715, 1503, 1734, 2030, 2231
Hsp92I	GRCGYC	1 cut(s)	2030
Hsp92II	CATG	8 cut(s)	25, 34, 76, 398, 1153, 1750, 2143, 2152
HspAI	GCGC	3 cut(s)	239, 2166, 2210
Kzo9I	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
LguI	GCTCTTC	1 cut(s)	2135
LmnI	GCTCC	4 cut(s)	232, 642, 766, 1877
Lsp1109I	GCAGC	8 cut(s)	271, 299, 373, 1229, 1664, 1763, 2194, 2199
LweI	GCATC	6 cut(s)	54, 397, 801, 1695, 1944, 2057
MabI	ACCWGGT	1 cut(s)	216
MaeI	CTAG	4 cut(s)	209, 806, 1085, 1163
MaeII	ACGT	6 cut(s)	196, 715, 1503, 1734, 2030, 2231
MaeIII	GTNAC	5 cut(s)	152, 716, 1572, 1641, 2257
MalI	GATC	9 cut(s)	140, 564, 812, 844, 852, 918, 984, 1148, 2334
MbiI	CCGCTC	1 cut(s)	121
MboI	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
MfeI	CAATTG	1 cut(s)	510
MflI	RGATCY	6 cut(s)	562, 842, 850, 916, 982, 2332
MhlI	GDGCHC	1 cut(s)	127
MlsI	TGGCCA	3 cut(s)	186, 1263, 1493
MluNI	TGGCCA	3 cut(s)	186, 1263, 1493
MlyI	GAGTC	5 cut(s)	625, 1311, 1359, 1502, 1874
Mox20I	TGGCCA	3 cut(s)	186, 1263, 1493
Mph1103I	ATGCAT	1 cut(s)	320
MscI	TGGCCA	3 cut(s)	186, 1263, 1493
MseI	TTAA	4 cut(s)	579, 738, 747, 2187
MslI	CAYNNNNRTG	2 cut(s)	173, 1026
Msp20I	TGGCCA	3 cut(s)	186, 1263, 1493
MspA1I	CMGCKG	2 cut(s)	730, 1584
MspI	CCGG	4 cut(s)	27, 1929, 2169, 2216
MspR9I	CCNGG	8 cut(s)	218, 885, 951, 1017, 1299, 1929, 1964, 2170
MunI	CAATTG	1 cut(s)	510
Mva1269I	GAATGC	1 cut(s)	320
MvaI	CCWGG	6 cut(s)	218, 885, 951, 1017, 1299, 1964
MwoI	GCNNNNNNNGC	4 cut(s)	118, 131, 651, 2104
NciI	CCSGG	2 cut(s)	1929, 2170
NcoI	CCATGG	3 cut(s)	394, 1746, 2139
NdeII	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
NlaIII	CATG	8 cut(s)	25, 34, 76, 398, 1153, 1750, 2143, 2152
NlaIV	GGNNCC	4 cut(s)	644, 762, 2310, 2334
NmuCI	GTSAC	2 cut(s)	152, 716
NsiI	ATGCAT	1 cut(s)	320
PceI	AGGCCT	1 cut(s)	1240
PciSI	GCTCTTC	1 cut(s)	2135
PcsI	WCGNNNNNNNCGW	2 cut(s)	721, 1421
PctI	GAATGC	1 cut(s)	320
PfeI	GAWTC	3 cut(s)	666, 1811, 1946
PflMI	CCANNNNNTGG	1 cut(s)	610
PleI	GAGTC	5 cut(s)	624, 1310, 1358, 1502, 1873
PpsI	GAGTC	5 cut(s)	624, 1310, 1358, 1502, 1873
Ppu21I	YACGTR	1 cut(s)	1735
PshAI	GACNNNNGTC	1 cut(s)	1087
PshBI	ATTAAT	1 cut(s)	738
PsiI	TTATAA	1 cut(s)	675
Psp6I	CCWGG	6 cut(s)	216, 883, 949, 1015, 1297, 1962
PspFI	CCCAGC	2 cut(s)	515, 2113
PspGI	CCWGG	6 cut(s)	216, 883, 949, 1015, 1297, 1962
PspN4I	GGNNCC	4 cut(s)	644, 762, 2310, 2334
PspPI	GGNCC	2 cut(s)	1691, 2116
PstI	CTGCAG	3 cut(s)	289, 1704, 1795
PsuI	RGATCY	6 cut(s)	562, 842, 850, 916, 982, 2332
RsaI	GTAC	8 cut(s)	439, 508, 557, 770, 1296, 1341, 1565, 1733
RsaNI	GTAC	8 cut(s)	438, 507, 556, 769, 1295, 1340, 1564, 1732
RseI	CAYNNNNRTG	2 cut(s)	173, 1026
SapI	GCTCTTC	1 cut(s)	2135
SaqAI	TTAA	4 cut(s)	579, 738, 747, 2187
Sau3AI	GATC	9 cut(s)	138, 562, 810, 842, 850, 916, 982, 1146, 2332
Sau96I	GGNCC	2 cut(s)	1691, 2116
ScaI	AGTACT	1 cut(s)	439
SchI	GAGTC	5 cut(s)	625, 1311, 1359, 1502, 1874
ScrFI	CCNGG	8 cut(s)	218, 885, 951, 1017, 1299, 1929, 1964, 2170
SduI	GDGCHC	1 cut(s)	127
SexAI	ACCWGGT	1 cut(s)	216
SfaNI	GCATC	6 cut(s)	54, 397, 801, 1695, 1944, 2057
SfcI	CTRYAG	7 cut(s)	285, 472, 846, 1700, 1791, 1911, 2241
SmiMI	CAYNNNNRTG	2 cut(s)	173, 1026
SmlI	CTYRAG	1 cut(s)	825
SmoI	CTYRAG	1 cut(s)	825
SpeI	ACTAGT	1 cut(s)	208
SseBI	AGGCCT	1 cut(s)	1240
SspI	AATATT	1 cut(s)	1525
SspMI	CTAG	4 cut(s)	209, 806, 1085, 1163
StuI	AGGCCT	1 cut(s)	1240
StyD4I	CCNGG	8 cut(s)	216, 883, 949, 1015, 1297, 1927, 1962, 2168
StyI	CCWWGG	6 cut(s)	394, 1276, 1676, 1746, 2099, 2139
TaaI	ACNGT	8 cut(s)	38, 473, 506, 680, 1196, 1572, 1900, 2274
TaiI	ACGT	6 cut(s)	199, 718, 1506, 1737, 2033, 2234
TaqI	TCGA	2 cut(s)	690, 1175
TatI	WGTACW	3 cut(s)	437, 506, 555
TauI	GCSGC	2 cut(s)	1375, 1935
TfiI	GAWTC	3 cut(s)	666, 1811, 1946
Tru1I	TTAA	4 cut(s)	579, 738, 747, 2187
Tru9I	TTAA	4 cut(s)	579, 738, 747, 2187
TscAI	CASTG	6 cut(s)	43, 180, 509, 1201, 2277, 2329
TseFI	GTSAC	2 cut(s)	152, 716
TseI	GCWGC	8 cut(s)	284, 287, 386, 1217, 1652, 1751, 2207, 2212
Tsp45I	GTSAC	2 cut(s)	152, 716
TspDTI	ATGAA	7 cut(s)	89, 1197, 1203, 1220, 1245, 1610, 1836
TspGWI	ACGGA	4 cut(s)	713, 1109, 1117, 1430
TspRI	CASTG	6 cut(s)	43, 180, 509, 1201, 2277, 2329
Van91I	CCANNNNNTGG	1 cut(s)	610
VspI	ATTAAT	1 cut(s)	738
XagI	CCTNNNNNAGG	3 cut(s)	873, 939, 1005
XapI	RAATTY	2 cut(s)	571, 1248
XcmI	CCANNNNNNNNNTGG	3 cut(s)	28, 232, 1274
XmiI	GTMKAC	1 cut(s)	1091
XspI	CTAG	4 cut(s)	209, 806, 1085, 1163
ZraI	GACGTC	1 cut(s)	2031
ZrmI	AGTACT	1 cut(s)	439
Zsp2I	ATGCAT	1 cut(s)	320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.