Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004099

Physical Location & Seq

Genomic Coordinates Forward (+)

43108368 .. 43109983

Gene Structure 1616 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G526500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1293 bp

ATGGAAGTGAAAAGCAGGGCCAAGGCATTTACCAAAAACAAGAGCTTTAGTCACTTAACCATTCTCATCAGCATTGGCCTTTTTTCTCTGTTTCTGATTCTCATCCGATTTCATGCACAAGCCTCTCCTTTTGGGTTTACTTCATTGTCCACCTCTTCTGCTTCATGGGATTTCTTCAAGAAATGGAGAGGAACAGAAATGGATGCCAATCTTAGCTCAAAACTCCGAGACTCGGTCACATTTCTTCCTCTCAAAGACATAAGGTTTGCTAAGACTGCAGTGGAGGGGAACACTTGGTTTATGAACTCTTTGAGTGACACATATGAAGAAAATGAATCCCAGTATCTCTATTTCCACTTAGAAGCATCCAAGGGAAGGCTGCTGTGCCTCAAAGGGAATGACAAAAGAGATGGCACCAAAAACTCATATGCCTTAGCATGGCCTGAAGGTCTACCAAACTCAACCACACTCTTGAAGGGCCTCACTTTTGTGTCTGATGCATTCTATGACTATAAAAACTTGTGGCATGGGCTAACTGCAATGTTTCCTTTTGTGGGTTGGTACTTTTTCCACTGGGGAGAGCTCAGAGACCAAATGGGATGGTGGATTCAGAATGTCATGCAAGCAAGTTTTGGGCAGGTGCCAGTTGAAGCAGTTGTGATGAGGCACAATGTTGGGAAAATAGGGAAGCACAGGAAGCTTCAGGTCTGTGACTTGTTGAGATGTAAAGCAAGAGAATTTTGTGGCATAAACCCTGCAGGTAGGAGGAAGGAGGTGAATGTGCGAGGGCAGCCAAGTATAAGGTTGACATTGCTGATGACGAGAGGTTCAAGATCATTCAAGGATCCAACGGCTGGGATTAATGTATTCTCAAGGCAGTGTGCAATGGTGGATAGGTGCATGTTAGAGGTGGTTCAGTCTGAAGATCTGAATTTCTCTAATGTAATGCCCAACACAGACATCCTTGCATCCCCACATGGAGCACAGATAACAAACATGCTCTTCATGGATAGGAACAGTAGCACAATGGAGTTTTTCTCCAAAGGATGGTTGAAGCTTGCCAGGGTCGGCCAGAATGTTTATCATTGGATGGCAGACCAATCCGGCATGAAGCACAGATGTGCATGGTGGGACCCCCACACCAAGAAGGAATGCCCAGACCCTACAAAACAACTAGAATGCTTTCTCCTTTACAAAGATAGCCAGCTTGGCCACAATGAAACCTACTTTGCAGAGTGGGCAAGAACAGTCCTCAAACAAGTAAGAACAAGCAAGCAAGAACAAACCATCCAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF563

Protein Analysis

431

Amino Acids

49.65

Weight (kDa)

9.37

Isoelectric Point (pI)

35.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33590 AT4G33600
fragaria_vesca	FvH4_2g11820 FvH4_5g35970
malus_domestica	MD05G1047000.v1.1 MD08G1191500.v1.1 MD15G1380300.v1.1
prunus_persica	Prupe.1G526500_v2.0.a1 Prupe.8G066800_v2.0.a1
pyrus_communis	pycom15g34060
rosa_chinensis	RchiOBHm_Chr4g0390351 RchiOBHm_Chr7g0237711
rosa_laevigata	RLG00000000975 RLG00000009924
rosa_multiflora	Rmu_co8254707.1_g000001 Rmu_co8428079.1_g000001 Rmu_sc0029360.1_g000001 Rmu_sc0029361.1_g000001 Rmu_ssc0000067.1_g000045
rosa_roxburghii	Rroxscaffold_3G00223850 Rroxscaffold_5G00336450
rosa_rugosa	Rorug03G0330300 Rorug07G0306500
rosa_samantha	Rh4AG031800 Rh4BG026000 Rh4CG035000 Rh4DG027600 Rh7AG463300 Rh7BG433300 Rh7CG480200 Rh7DG449200
rosa_wichuraiana	Rw4G002530 Rw7G038330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	628
Acc36I	ACCTGC	2 cut(s)	628, 749
AccB1I	GGYRCC	2 cut(s)	413, 640
AccB7I	CCANNNNNTGG	2 cut(s)	854, 1047
AccI	GTMKAC	1 cut(s)	451
AclWI	GGATC	2 cut(s)	839, 852
AcoI	YGGCCR	2 cut(s)	1069, 1210
AcsI	RAATTY	2 cut(s)	737, 931
AcuI	CTGAAG	3 cut(s)	465, 686, 942
AfaI	GTAC	1 cut(s)	563
AfiI	CCNNNNNNNGG	6 cut(s)	232, 375, 438, 554, 854, 1047
AgsI	TTSAA	6 cut(s)	178, 475, 650, 831, 841, 1054
AjnI	CCWGG	1 cut(s)	1061
AleI	CACNNNNGTG	2 cut(s)	488, 1119
AloI	GAACNNNNNNTCC	1 cut(s)	1272
AluBI	AGCT	6 cut(s)	45, 216, 583, 700, 1057, 1207
AluI	AGCT	6 cut(s)	45, 216, 583, 700, 1057, 1207
Alw21I	GWGCWC	2 cut(s)	585, 985
Alw26I	GTCTC	2 cut(s)	222, 582
AlwI	GGATC	2 cut(s)	839, 852
AoxI	GGCC	6 cut(s)	18, 76, 440, 478, 1069, 1210
ApeKI	GCWGC	2 cut(s)	379, 790
ApoI	RAATTY	2 cut(s)	737, 931
ArsI	GACNNNNNNTTYG	2 cut(s)	248, 280
AseI	ATTAAT	1 cut(s)	861
Asp700I	GAANNNNTTC	1 cut(s)	1182
AspS9I	GGNCC	3 cut(s)	18, 478, 1132
AsuHPI	GGTGA	1 cut(s)	787
AvaII	GGWCC	1 cut(s)	1132
BalI	TGGCCA	1 cut(s)	1212
BamHI	GGATCC	1 cut(s)	844
BanI	GGYRCC	2 cut(s)	413, 640
BanII	GRGCYC	1 cut(s)	585
Bbv12I	GWGCWC	2 cut(s)	585, 985
BbvI	GCAGC	2 cut(s)	366, 802
BccI	CCATC	4 cut(s)	404, 594, 1041, 1084
BceAI	ACGGC	1 cut(s)	867
BciT130I	CCWGG	1 cut(s)	1063
BcoDI	GTCTC	2 cut(s)	222, 582
BfaI	CTAG	1 cut(s)	1175
BfmI	CTRYAG	2 cut(s)	276, 756
BfuAI	ACCTGC	2 cut(s)	628, 749
BglI	GCCNNNNNGGC	1 cut(s)	1209
BglII	AGATCT	1 cut(s)	925
BisI	GCNGC	2 cut(s)	380, 791
BlsI	GCNGC	2 cut(s)	381, 792
Bme1390I	CCNGG	1 cut(s)	1063
Bme18I	GGWCC	1 cut(s)	1132
BmgT120I	GGNCC	3 cut(s)	18, 478, 1132
BmiI	GGNNCC	5 cut(s)	415, 642, 846, 1133, 1134
BmrFI	CCNGG	1 cut(s)	1063
BmrI	ACTGGG	2 cut(s)	334, 583
BmsI	GCATC	4 cut(s)	193, 374, 487, 977
BmuI	ACTGGG	2 cut(s)	334, 583
BplI	GAGNNNNNCTC	2 cut(s)	1022, 1054
Bpu10I	CCTNAGC	1 cut(s)	433
BpuEI	CTTGAG	1 cut(s)	856
BsaBI	GATNNNNATC	2 cut(s)	101, 207
BsaI	GGTCTC	1 cut(s)	582
BsaJI	CCNNGG	3 cut(s)	21, 369, 1062
Bsc4I	CCNNNNNNNGG	6 cut(s)	232, 375, 438, 554, 854, 1047
Bse1I	ACTGG	3 cut(s)	340, 578, 644
Bse3DI	GCAATG	3 cut(s)	546, 809, 891
Bse8I	GATNNNNATC	2 cut(s)	101, 207
BseBI	CCWGG	1 cut(s)	1063
BseDI	CCNNGG	3 cut(s)	21, 369, 1062
BseGI	GGATG	9 cut(s)	102, 208, 365, 605, 960, 968, 1052, 1095, 1287
BseJI	GATNNNNATC	2 cut(s)	101, 207
BseLI	CCNNNNNNNGG	6 cut(s)	232, 375, 438, 554, 854, 1047
BseMI	GCAATG	3 cut(s)	546, 809, 891
BseMII	CTCAG	1 cut(s)	598
BseNI	ACTGG	3 cut(s)	340, 578, 644
BseXI	GCAGC	2 cut(s)	366, 802
BseYI	CCCAGC	1 cut(s)	854
BshFI	GGCC	6 cut(s)	20, 78, 442, 480, 1071, 1212
BshNI	GGYRCC	2 cut(s)	413, 640
BsiHKAI	GWGCWC	2 cut(s)	585, 985
BsiSI	CCGG	1 cut(s)	1104
BslFI	GGGAC	1 cut(s)	1145
BslI	CCNNNNNNNGG	6 cut(s)	232, 375, 438, 554, 854, 1047
BsmAI	GTCTC	2 cut(s)	222, 582
BsmFI	GGGAC	1 cut(s)	1145
BsmI	GAATGC	3 cut(s)	500, 1157, 1184
BsnI	GGCC	6 cut(s)	20, 78, 442, 480, 1071, 1212
Bso31I	GGTCTC	1 cut(s)	582
Bsp1286I	GDGCHC	2 cut(s)	585, 985
Bsp143I	GATC	3 cut(s)	833, 844, 925
BspANI	GGCC	6 cut(s)	20, 78, 442, 480, 1071, 1212
BspCNI	CTCAG	1 cut(s)	597
BspLI	GGNNCC	5 cut(s)	415, 642, 846, 1133, 1134
BspMAI	CTGCAG	2 cut(s)	280, 760
BspMI	ACCTGC	2 cut(s)	628, 749
BspPI	GGATC	2 cut(s)	839, 852
BspQI	GCTCTTC	1 cut(s)	1007
BspT107I	GGYRCC	2 cut(s)	413, 640
BspTNI	GGTCTC	1 cut(s)	582
BsrDI	GCAATG	3 cut(s)	546, 809, 891
BsrI	ACTGG	3 cut(s)	340, 578, 644
BssECI	CCNNGG	3 cut(s)	21, 369, 1062
BssMI	GATC	3 cut(s)	833, 844, 925
BssT1I	CCWWGG	2 cut(s)	21, 369
Bst2UI	CCWGG	1 cut(s)	1063
Bst4CI	ACNGT	2 cut(s)	1019, 1249
Bst6I	CTCTTC	2 cut(s)	160, 1007
BstC8I	GCNNGC	4 cut(s)	624, 1059, 1205, 1274
BstDEI	CTNAG	5 cut(s)	212, 270, 358, 433, 584
BstF5I	GGATG	9 cut(s)	102, 208, 365, 605, 960, 968, 1052, 1095, 1287
BstKTI	GATC	3 cut(s)	836, 847, 928
BstMAI	GTCTC	2 cut(s)	222, 582
BstMBI	GATC	3 cut(s)	833, 844, 925
BstMWI	GCNNNNNNNGC	5 cut(s)	275, 697, 790, 1209, 1238
BstNI	CCWGG	1 cut(s)	1063
BstNSI	RCATGY	2 cut(s)	904, 1000
BstSCI	CCNGG	1 cut(s)	1061
BstSFI	CTRYAG	2 cut(s)	276, 756
BstV1I	GCAGC	2 cut(s)	366, 802
BstX2I	RGATCY	2 cut(s)	844, 925
BstYI	RGATCY	2 cut(s)	844, 925
BsuRI	GGCC	6 cut(s)	20, 78, 442, 480, 1071, 1212
BtsCI	GGATG	9 cut(s)	102, 208, 365, 605, 960, 968, 1052, 1095, 1287
BtsI	GCAGTG	2 cut(s)	285, 884
BtsIMutI	CAGTG	3 cut(s)	285, 571, 884
BveI	ACCTGC	2 cut(s)	628, 749
Cac8I	GCNNGC	4 cut(s)	624, 1059, 1205, 1274
Cfr13I	GGNCC	3 cut(s)	18, 478, 1132
Csp6I	GTAC	1 cut(s)	562
CviQI	GTAC	1 cut(s)	562
DdeI	CTNAG	5 cut(s)	212, 270, 358, 433, 584
DpnI	GATC	3 cut(s)	835, 846, 927
DpnII	GATC	3 cut(s)	833, 844, 925
EaeI	YGGCCR	2 cut(s)	1069, 1210
Eam1104I	CTCTTC	2 cut(s)	160, 1007
EarI	CTCTTC	2 cut(s)	160, 1007
Ecl136II	GAGCTC	1 cut(s)	583
Eco130I	CCWWGG	2 cut(s)	21, 369
Eco24I	GRGCYC	1 cut(s)	585
Eco31I	GGTCTC	1 cut(s)	582
Eco47I	GGWCC	1 cut(s)	1132
Eco53kI	GAGCTC	1 cut(s)	583
Eco57I	CTGAAG	3 cut(s)	465, 686, 942
EcoICRI	GAGCTC	1 cut(s)	583
EcoO109I	RGGNCCY	2 cut(s)	478, 1132
EcoRII	CCWGG	1 cut(s)	1061
EcoT14I	CCWWGG	2 cut(s)	21, 369
EcoT22I	ATGCAT	1 cut(s)	502
EcoT38I	GRGCYC	1 cut(s)	585
ErhI	CCWWGG	2 cut(s)	21, 369
FaqI	GGGAC	1 cut(s)	1145
FauNDI	CATATG	2 cut(s)	322, 427
FblI	GTMKAC	1 cut(s)	451
Fnu4HI	GCNGC	2 cut(s)	380, 791
FokI	GGATG	9 cut(s)	89, 215, 352, 612, 947, 955, 1059, 1102, 1274
FriOI	GRGCYC	1 cut(s)	585
Fsp4HI	GCNGC	2 cut(s)	380, 791
FspBI	CTAG	1 cut(s)	1175
GluI	GCNGC	2 cut(s)	380, 791
GsaI	CCCAGC	1 cut(s)	858
HaeIII	GGCC	6 cut(s)	20, 78, 442, 480, 1071, 1212
HapII	CCGG	1 cut(s)	1104
HincII	GTYRAC	1 cut(s)	807
HindII	GTYRAC	1 cut(s)	807
HindIII	AAGCTT	2 cut(s)	698, 1055
HinfI	GANTC	4 cut(s)	97, 230, 335, 607
HpaII	CCGG	1 cut(s)	1104
HphI	GGTGA	1 cut(s)	787
Hpy166II	GTNNAC	4 cut(s)	138, 150, 452, 807
Hpy188I	TCNGA	8 cut(s)	96, 107, 227, 496, 587, 612, 922, 930
Hpy188III	TCNNGA	3 cut(s)	178, 472, 831
Hpy8I	GTNNAC	4 cut(s)	138, 150, 452, 807
HpyAV	CCTTC	5 cut(s)	369, 440, 469, 763, 1141
HpyCH4III	ACNGT	2 cut(s)	1019, 1249
HpyF10VI	GCNNNNNNNGC	5 cut(s)	275, 697, 790, 1209, 1238
HpyF3I	CTNAG	5 cut(s)	212, 270, 358, 433, 584
KflI	GGGWCCC	1 cut(s)	1132
Kzo9I	GATC	3 cut(s)	833, 844, 925
LguI	GCTCTTC	1 cut(s)	1007
LmnI	GCTCC	1 cut(s)	980
Lsp1109I	GCAGC	2 cut(s)	366, 802
LweI	GCATC	4 cut(s)	193, 374, 487, 977
MaeI	CTAG	1 cut(s)	1175
MaeIII	GTNAC	4 cut(s)	50, 235, 314, 710
MalI	GATC	3 cut(s)	835, 846, 927
MboI	GATC	3 cut(s)	833, 844, 925
MboII	GAAGA	6 cut(s)	147, 166, 236, 338, 935, 994
MflI	RGATCY	2 cut(s)	844, 925
MhlI	GDGCHC	2 cut(s)	585, 985
MlsI	TGGCCA	1 cut(s)	1212
MluCI	AATT	2 cut(s)	737, 931
MluNI	TGGCCA	1 cut(s)	1212
MlyI	GAGTC	1 cut(s)	224
MmeI	TCCRAC	1 cut(s)	872
Mox20I	TGGCCA	1 cut(s)	1212
Mph1103I	ATGCAT	1 cut(s)	502
MroXI	GAANNNNTTC	1 cut(s)	1182
MscI	TGGCCA	1 cut(s)	1212
MseI	TTAA	2 cut(s)	56, 861
MslI	CAYNNNNRTG	2 cut(s)	488, 1119
Msp20I	TGGCCA	1 cut(s)	1212
MspI	CCGG	1 cut(s)	1104
MspR9I	CCNGG	1 cut(s)	1063
Mva1269I	GAATGC	3 cut(s)	500, 1157, 1184
MvaI	CCWGG	1 cut(s)	1063
MwoI	GCNNNNNNNGC	5 cut(s)	275, 697, 790, 1209, 1238
NdeI	CATATG	2 cut(s)	322, 427
NdeII	GATC	3 cut(s)	833, 844, 925
NlaIV	GGNNCC	5 cut(s)	415, 642, 846, 1133, 1134
NmuCI	GTSAC	4 cut(s)	50, 235, 314, 710
NsiI	ATGCAT	1 cut(s)	502
NspI	RCATGY	2 cut(s)	904, 1000
OliI	CACNNNNGTG	2 cut(s)	488, 1119
PaqCI	CACCTGC	1 cut(s)	628
PciSI	GCTCTTC	1 cut(s)	1007
PctI	GAATGC	3 cut(s)	500, 1157, 1184
PdmI	GAANNNNTTC	1 cut(s)	1182
PfeI	GAWTC	3 cut(s)	97, 335, 607
PflFI	GACNNNGTC	1 cut(s)	233
PflMI	CCANNNNNTGG	2 cut(s)	854, 1047
PkrI	GCNGC	2 cut(s)	381, 792
PleI	GAGTC	1 cut(s)	224
PpsI	GAGTC	1 cut(s)	224
PpuMI	RGGWCCY	1 cut(s)	1132
PshBI	ATTAAT	1 cut(s)	861
Psp124BI	GAGCTC	1 cut(s)	585
Psp5II	RGGWCCY	1 cut(s)	1132
Psp6I	CCWGG	1 cut(s)	1061
PspFI	CCCAGC	1 cut(s)	854
PspGI	CCWGG	1 cut(s)	1061
PspN4I	GGNNCC	5 cut(s)	415, 642, 846, 1133, 1134
PspPI	GGNCC	3 cut(s)	18, 478, 1132
PspPPI	RGGWCCY	1 cut(s)	1132
PstI	CTGCAG	2 cut(s)	280, 760
PsuI	RGATCY	2 cut(s)	844, 925
PsyI	GACNNNGTC	1 cut(s)	233
RsaI	GTAC	1 cut(s)	563
RsaNI	GTAC	1 cut(s)	562
RseI	CAYNNNNRTG	2 cut(s)	488, 1119
SacI	GAGCTC	1 cut(s)	585
SapI	GCTCTTC	1 cut(s)	1007
SaqAI	TTAA	2 cut(s)	56, 861
SatI	GCNGC	2 cut(s)	380, 791
Sau3AI	GATC	3 cut(s)	833, 844, 925
Sau96I	GGNCC	3 cut(s)	18, 478, 1132
SbfI	CCTGCAGG	1 cut(s)	760
SchI	GAGTC	1 cut(s)	224
ScrFI	CCNGG	1 cut(s)	1063
SdaI	CCTGCAGG	1 cut(s)	760
SduI	GDGCHC	2 cut(s)	585, 985
SfaNI	GCATC	4 cut(s)	193, 374, 487, 977
SfcI	CTRYAG	2 cut(s)	276, 756
SinI	GGWCC	1 cut(s)	1132
SmiMI	CAYNNNNRTG	2 cut(s)	488, 1119
SmlI	CTYRAG	1 cut(s)	871
SmoI	CTYRAG	1 cut(s)	871
Sse8387I	CCTGCAGG	1 cut(s)	760
Sse9I	AATT	2 cut(s)	737, 931
SspMI	CTAG	1 cut(s)	1175
SstI	GAGCTC	1 cut(s)	585
StyD4I	CCNGG	1 cut(s)	1061
StyI	CCWWGG	2 cut(s)	21, 369
TaaI	ACNGT	2 cut(s)	1019, 1249
TaqII	GACCGA	1 cut(s)	223
TasI	AATT	2 cut(s)	737, 931
TfiI	GAWTC	3 cut(s)	97, 335, 607
Tru1I	TTAA	2 cut(s)	56, 861
Tru9I	TTAA	2 cut(s)	56, 861
TscAI	CASTG	3 cut(s)	285, 578, 884
TseFI	GTSAC	4 cut(s)	50, 235, 314, 710
TseI	GCWGC	2 cut(s)	379, 790
Tsp45I	GTSAC	4 cut(s)	50, 235, 314, 710
TspDTI	ATGAA	9 cut(s)	101, 132, 153, 317, 339, 348, 994, 1124, 1233
TspRI	CASTG	3 cut(s)	285, 578, 884
Tth111I	GACNNNGTC	1 cut(s)	233
Van91I	CCANNNNNTGG	2 cut(s)	854, 1047
VpaK11BI	GGWCC	1 cut(s)	1132
VspI	ATTAAT	1 cut(s)	861
XapI	RAATTY	2 cut(s)	737, 931
XceI	RCATGY	2 cut(s)	904, 1000
XmiI	GTMKAC	1 cut(s)	451
XmnI	GAANNNNTTC	1 cut(s)	1182
XspI	CTAG	1 cut(s)	1175
Zsp2I	ATGCAT	1 cut(s)	502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.