Prupe.2G178000_v2.0.a1

Desiccation protectant protein Lea14 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
22264595 .. 22265933
1339 bp
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UTR
Exon/CDS
Intron
Prupe.2G178000.1

Sequence Viewer

Length: 519 bp
ATGGCGGGGTTGGTGGACAAGGCCAAGAACTTTGTGGCAGATAAGATAGCAAATGTGCCAAAGCCAGATGCAAGTCTCACAGACGTTGATTTCAAGAAGGTGAGTTTTGACTCTGCGGATTACATCGCCAAGGTGTCTGTCAACAATCCCTATTCACATCCTCTCCCCGTCTGTGAGGTCAAATACACCCTCAAAAGCGCTGGCAGGGTCATTGCATCTGGGAACATGCCAGATCCTGGCTCAATAAAGTCAAGTGGCACTACTATGTTGGAGGTGCCTGTGAAGGTGCCACATAGCATAATTGTGACATTGGTAAGGGACGTTGCTAAGGATTGGGACATTGACTATGAGTTGGATTTGGGTCTCATCATTGACCTCCCTCTAGTTGGGAACCTTACCATACCTCTATCTAGGAAGGGCGAAATCAAGCTTCCCACCTTATCTGAAGCTATTTGGGGTTCAAAGGATGAAGCTTCAAAAGAGACTAAAAAGGAGATTCCAAAAGAGGCAACAAAGTAG

Protein Analysis

173

Amino Acids

18.63

Weight (kDa)

6.14

Isoelectric Point (pI)

12.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 274, 286
AccB7I CCANNNNNTGG 1 cut(s) 236
AciI CCGC 2 cut(s) 5, 116
AclWI GGATC 1 cut(s) 227
AcuI CTGAAG 1 cut(s) 465
AfeI AGCGCT 1 cut(s) 199
AfiI CCNNNNNNNGG 2 cut(s) 236, 386
AgsI TTSAA 3 cut(s) 94, 462, 477
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 3 cut(s) 430, 449, 473
AluI AGCT 3 cut(s) 430, 449, 473
Alw26I GTCTC 3 cut(s) 80, 368, 476
AlwI GGATC 1 cut(s) 227
AlwNI CAGNNNCTG 1 cut(s) 236
Aor51HI AGCGCT 1 cut(s) 199
AoxI GGCC 1 cut(s) 21
AspLEI GCGC 1 cut(s) 200
AsuHPI GGTGA 1 cut(s) 112
BanI GGYRCC 2 cut(s) 274, 286
BciT130I CCWGG 1 cut(s) 237
BcoDI GTCTC 3 cut(s) 80, 368, 476
BfaI CTAG 2 cut(s) 383, 411
BfoI RGCGCY 1 cut(s) 201
Bme1390I CCNGG 1 cut(s) 237
BmiI GGNNCC 3 cut(s) 276, 288, 392
BmrFI CCNGG 1 cut(s) 237
BmsI GCATC 2 cut(s) 58, 224
Bpu10I CCTNAGC 1 cut(s) 327
BsaI GGTCTC 1 cut(s) 368
BsaJI CCNNGG 1 cut(s) 129
BsaXI ACNNNNNCTCC 2 cut(s) 147, 177
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 386
Bse3DI GCAATG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 1 cut(s) 129
BseGI GGATG 2 cut(s) 157, 472
BseLI CCNNNNNNNGG 2 cut(s) 236, 386
BseMI GCAATG 1 cut(s) 210
BshFI GGCC 1 cut(s) 23
BshNI GGYRCC 2 cut(s) 274, 286
BslFI GGGAC 2 cut(s) 332, 350
BslI CCNNNNNNNGG 2 cut(s) 236, 386
BsmAI GTCTC 3 cut(s) 80, 368, 476
BsmFI GGGAC 2 cut(s) 332, 350
BsnI GGCC 1 cut(s) 23
Bso31I GGTCTC 1 cut(s) 368
Bsp143I GATC 1 cut(s) 232
BspACI CCGC 2 cut(s) 5, 116
BspANI GGCC 1 cut(s) 23
BspLI GGNNCC 3 cut(s) 276, 288, 392
BspPI GGATC 1 cut(s) 227
BspT107I GGYRCC 2 cut(s) 274, 286
BspTNI GGTCTC 1 cut(s) 368
BsrDI GCAATG 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 129
BssMI GATC 1 cut(s) 232
BssT1I CCWWGG 1 cut(s) 129
Bst2UI CCWGG 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 202
BstDEI CTNAG 1 cut(s) 327
BstF5I GGATG 2 cut(s) 157, 472
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 1 cut(s) 235
BstMAI GTCTC 3 cut(s) 80, 368, 476
BstMBI GATC 1 cut(s) 232
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 1 cut(s) 229
BstSCI CCNGG 1 cut(s) 235
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
BsuRI GGCC 1 cut(s) 23
BtgZI GCGATG 1 cut(s) 109
BtsCI GGATG 2 cut(s) 157, 472
Cac8I GCNNGC 1 cut(s) 202
CaiI CAGNNNCTG 1 cut(s) 236
CfoI GCGC 1 cut(s) 200
CviAII CATG 1 cut(s) 226
CviJI RGCY 6 cut(s) 23, 64, 240, 430, 449, 473
CviKI_1 RGCY 6 cut(s) 23, 64, 240, 430, 449, 473
DdeI CTNAG 1 cut(s) 327
DpnI GATC 1 cut(s) 234
DpnII GATC 1 cut(s) 232
Eco130I CCWWGG 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 368
Eco47III AGCGCT 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 465
EcoRII CCWGG 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 129
FaeI CATG 1 cut(s) 229
FaiI YATR 6 cut(s) 227, 266, 294, 299, 348, 401
FaqI GGGAC 2 cut(s) 332, 350
FatI CATG 1 cut(s) 225
FokI GGATG 2 cut(s) 144, 479
FspBI CTAG 2 cut(s) 383, 411
GlaI GCGC 1 cut(s) 199
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 1 cut(s) 23
HhaI GCGC 1 cut(s) 200
Hin1II CATG 1 cut(s) 229
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 2 cut(s) 428, 471
HinfI GANTC 2 cut(s) 110, 496
HphI GGTGA 1 cut(s) 112
Hpy166II GTNNAC 2 cut(s) 16, 142
Hpy188I TCNGA 1 cut(s) 445
Hpy188III TCNNGA 1 cut(s) 94
Hpy8I GTNNAC 2 cut(s) 16, 142
HpyAV CCTTC 3 cut(s) 91, 277, 409
HpyCH4IV ACGT 2 cut(s) 84, 321
HpyCH4V TGCA 2 cut(s) 71, 215
HpyF3I CTNAG 1 cut(s) 327
HpySE526I ACGT 2 cut(s) 84, 321
Hsp92II CATG 1 cut(s) 229
HspAI GCGC 1 cut(s) 198
Kzo9I GATC 1 cut(s) 232
LpnPI CCDG 8 cut(s) 78, 186, 190, 204, 222, 243, 249, 291
LweI GCATC 2 cut(s) 58, 224
MaeI CTAG 2 cut(s) 383, 411
MaeII ACGT 2 cut(s) 84, 321
MaeIII GTNAC 1 cut(s) 304
MalI GATC 1 cut(s) 234
MboI GATC 1 cut(s) 232
MflI RGATCY 1 cut(s) 232
MluCI AATT 1 cut(s) 300
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 2 cut(s) 249, 333
MnlI CCTC 8 cut(s) 169, 171, 200, 265, 386, 390, 414, 499
MslI CAYNNNNRTG 2 cut(s) 263, 302
MspR9I CCNGG 1 cut(s) 237
MvaI CCWGG 1 cut(s) 237
NdeII GATC 1 cut(s) 232
NlaIII CATG 1 cut(s) 229
NlaIV GGNNCC 3 cut(s) 276, 288, 392
NmuCI GTSAC 1 cut(s) 304
NspI RCATGY 1 cut(s) 229
PfeI GAWTC 1 cut(s) 496
PflMI CCANNNNNTGG 1 cut(s) 236
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 235
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 3 cut(s) 276, 288, 392
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 1 cut(s) 232
RseI CAYNNNNRTG 2 cut(s) 263, 302
Sau3AI GATC 1 cut(s) 232
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 1 cut(s) 237
SfaNI GCATC 2 cut(s) 58, 224
SmiMI CAYNNNNRTG 2 cut(s) 263, 302
Sse9I AATT 1 cut(s) 300
SsiI CCGC 2 cut(s) 5, 116
SspMI CTAG 2 cut(s) 383, 411
StyD4I CCNGG 1 cut(s) 235
StyI CCWWGG 1 cut(s) 129
TaiI ACGT 2 cut(s) 87, 324
TasI AATT 1 cut(s) 300
TfiI GAWTC 1 cut(s) 496
TseFI GTSAC 1 cut(s) 304
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 1 cut(s) 483
Van91I CCANNNNNTGG 1 cut(s) 236
XceI RCATGY 1 cut(s) 229
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XspI CTAG 2 cut(s) 383, 411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.