Prupe.2G178100_v2.0.a1

Desiccation protectant protein Lea14 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
22268316 .. 22269180
865 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G178100.1

Sequence Viewer

Length: 447 bp
ATGTCTGAGTTGTTGGAGAAAGCCAAGAACTTTGCGGCAGAGAAAGTGGGTCATGCAAAGAAGCCAGAGGCAGAAGTCACAGATGTTGATTACAAGACGCTGAGCTTAGGATCTGTTGAGTACCTTGCTAAAATCTCTGTGACCAATCCCTATGGAGTTGACCTCCCCATCTGTGATATCACTTACACCCTCAAGAGTGTTGGCAGGGAGATTACATCTGGAACTGTTCCAGATCCTGGTTCAATAGAAGGAAAGGACATTACTGTGCTTGAGGTACTATTAAAGGTGCCACATAACATATTGTTGACCTTGGCAAAAGATATTGGAGCAGATTGGGACATTGATTATGAGCTGGATATAGGCCTCACCATTGACCTTCCTGTCTTTGGCAACTTCACCATACCACTTAACAAGAAGGGAGCGATCAAGCTTCCCAGCGTCTTCTGA

Protein Analysis

149

Amino Acids

16.06

Weight (kDa)

4.78

Isoelectric Point (pI)

19.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 380
AccB1I GGYRCC 1 cut(s) 286
AccB7I CCANNNNNTGG 1 cut(s) 236
AciI CCGC 1 cut(s) 35
AclWI GGATC 2 cut(s) 118, 227
AfaI GTAC 2 cut(s) 122, 276
AfiI CCNNNNNNNGG 2 cut(s) 236, 386
AgsI TTSAA 1 cut(s) 243
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 3 cut(s) 105, 352, 430
AluI AGCT 3 cut(s) 105, 352, 430
AlwI GGATC 2 cut(s) 118, 227
AlwNI CAGNNNCTG 1 cut(s) 236
AoxI GGCC 1 cut(s) 361
AsuHPI GGTGA 2 cut(s) 358, 388
BanI GGYRCC 1 cut(s) 286
BbsI GAAGAC 1 cut(s) 433
BccI CCATC 1 cut(s) 176
BciT130I CCWGG 1 cut(s) 237
BisI GCNGC 1 cut(s) 36
BlpI GCTNAGC 1 cut(s) 101
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 1 cut(s) 237
BmiI GGNNCC 1 cut(s) 288
BmrFI CCNGG 1 cut(s) 237
BpiI GAAGAC 1 cut(s) 433
BplI GAGNNNNNCTC 2 cut(s) 147, 179
Bpu10I CCTNAGC 1 cut(s) 106
Bpu1102I GCTNAGC 1 cut(s) 101
BpuEI CTTGAG 2 cut(s) 176, 290
BsaJI CCNNGG 1 cut(s) 309
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 386
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 1 cut(s) 309
BseLI CCNNNNNNNGG 2 cut(s) 236, 386
BseMII CTCAG 1 cut(s) 92
BseYI CCCAGC 1 cut(s) 434
BshFI GGCC 1 cut(s) 363
BshNI GGYRCC 1 cut(s) 286
BslFI GGGAC 1 cut(s) 350
BslI CCNNNNNNNGG 2 cut(s) 236, 386
BsmFI GGGAC 1 cut(s) 350
BsnI GGCC 1 cut(s) 363
Bsp143I GATC 3 cut(s) 110, 232, 423
Bsp1720I GCTNAGC 1 cut(s) 101
BspACI CCGC 1 cut(s) 35
BspANI GGCC 1 cut(s) 363
BspCNI CTCAG 1 cut(s) 93
BspLI GGNNCC 1 cut(s) 288
BspPI GGATC 2 cut(s) 118, 227
BspT107I GGYRCC 1 cut(s) 286
BssECI CCNNGG 1 cut(s) 309
BssMI GATC 3 cut(s) 110, 232, 423
BssT1I CCWWGG 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 2 cut(s) 226, 265
BstDEI CTNAG 3 cut(s) 6, 101, 106
BstKTI GATC 3 cut(s) 113, 235, 426
BstMBI GATC 3 cut(s) 110, 232, 423
BstNI CCWGG 1 cut(s) 237
BstSCI CCNGG 1 cut(s) 235
BstV2I GAAGAC 1 cut(s) 433
BstX2I RGATCY 2 cut(s) 110, 232
BstYI RGATCY 2 cut(s) 110, 232
BsuRI GGCC 1 cut(s) 363
CaiI CAGNNNCTG 1 cut(s) 236
CseI GACGC 2 cut(s) 106, 427
Csp6I GTAC 2 cut(s) 121, 275
CviAII CATG 1 cut(s) 53
CviJI RGCY 6 cut(s) 23, 64, 105, 352, 363, 430
CviKI_1 RGCY 6 cut(s) 23, 64, 105, 352, 363, 430
CviQI GTAC 2 cut(s) 121, 275
DdeI CTNAG 3 cut(s) 6, 101, 106
DpnI GATC 3 cut(s) 112, 234, 425
DpnII GATC 3 cut(s) 110, 232, 423
DrdI GACNNNNNNGTC 1 cut(s) 380
DseDI GACNNNNNNGTC 1 cut(s) 380
Eco130I CCWWGG 1 cut(s) 309
Eco147I AGGCCT 1 cut(s) 363
Eco32I GATATC 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 235
EcoRV GATATC 1 cut(s) 178
EcoT14I CCWWGG 1 cut(s) 309
ErhI CCWWGG 1 cut(s) 309
FaeI CATG 1 cut(s) 56
FaiI YATR 7 cut(s) 54, 153, 294, 299, 348, 359, 401
FaqI GGGAC 1 cut(s) 350
FatI CATG 1 cut(s) 52
Fnu4HI GCNGC 1 cut(s) 36
Fsp4HI GCNGC 1 cut(s) 36
GluI GCNGC 1 cut(s) 36
GsaI CCCAGC 1 cut(s) 438
HaeIII GGCC 1 cut(s) 363
HgaI GACGC 2 cut(s) 106, 427
Hin1II CATG 1 cut(s) 56
HincII GTYRAC 2 cut(s) 160, 306
HindII GTYRAC 2 cut(s) 160, 306
HindIII AAGCTT 1 cut(s) 428
HphI GGTGA 2 cut(s) 358, 388
Hpy166II GTNNAC 2 cut(s) 160, 306
Hpy188I TCNGA 2 cut(s) 7, 446
Hpy188III TCNNGA 3 cut(s) 193, 219, 230
Hpy8I GTNNAC 2 cut(s) 160, 306
HpyAV CCTTC 3 cut(s) 242, 386, 409
HpyCH4III ACNGT 2 cut(s) 226, 265
HpyCH4V TGCA 1 cut(s) 56
HpyF3I CTNAG 3 cut(s) 6, 101, 106
Hsp92II CATG 1 cut(s) 56
Kzo9I GATC 3 cut(s) 110, 232, 423
LmnI GCTCC 2 cut(s) 326, 419
LpnPI CCDG 8 cut(s) 78, 190, 204, 222, 243, 249, 338, 393
MaeIII GTNAC 2 cut(s) 76, 139
MalI GATC 3 cut(s) 112, 234, 425
MboI GATC 3 cut(s) 110, 232, 423
MboII GAAGA 1 cut(s) 433
MflI RGATCY 2 cut(s) 110, 232
MnlI CCTC 5 cut(s) 61, 173, 200, 265, 374
MseI TTAA 2 cut(s) 281, 408
MslI CAYNNNNRTG 1 cut(s) 263
MspR9I CCNGG 1 cut(s) 237
MvaI CCWGG 1 cut(s) 237
NdeII GATC 3 cut(s) 110, 232, 423
NlaIII CATG 1 cut(s) 56
NlaIV GGNNCC 1 cut(s) 288
NmuCI GTSAC 2 cut(s) 76, 139
PceI AGGCCT 1 cut(s) 363
PflMI CCANNNNNTGG 1 cut(s) 236
PkrI GCNGC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 235
PspFI CCCAGC 1 cut(s) 434
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 1 cut(s) 288
PstNI CAGNNNCTG 1 cut(s) 236
PsuI RGATCY 2 cut(s) 110, 232
RsaI GTAC 2 cut(s) 122, 276
RsaNI GTAC 2 cut(s) 121, 275
RseI CAYNNNNRTG 1 cut(s) 263
SaqAI TTAA 2 cut(s) 281, 408
SatI GCNGC 1 cut(s) 36
Sau3AI GATC 3 cut(s) 110, 232, 423
ScrFI CCNGG 1 cut(s) 237
SetI ASST 9 cut(s) 107, 126, 165, 276, 288, 311, 354, 378, 432
SmiMI CAYNNNNRTG 1 cut(s) 263
SmlI CTYRAG 2 cut(s) 191, 269
SmoI CTYRAG 2 cut(s) 191, 269
SseBI AGGCCT 1 cut(s) 363
SsiI CCGC 1 cut(s) 35
StuI AGGCCT 1 cut(s) 363
StyD4I CCNGG 1 cut(s) 235
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 2 cut(s) 226, 265
TauI GCSGC 1 cut(s) 38
Tru1I TTAA 2 cut(s) 281, 408
Tru9I TTAA 2 cut(s) 281, 408
TseFI GTSAC 2 cut(s) 76, 139
Tsp45I GTSAC 2 cut(s) 76, 139
Van91I CCANNNNNTGG 1 cut(s) 236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.