pycom07g12800

Desiccation protectant protein Lea14 homolog

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
14126726 .. 14127762
1037 bp
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UTR
Exon/CDS
Intron
pycom07g12800.2

Sequence Viewer

Length: 519 bp
ATGTCGGGGTTGGTGGACAAGGCCAAACACTATGTGGCAGAAAAGATTGCAAATGTGCCGAAGCCTGATGCAAGCCTCACAGATGTTGATTTCAAGAAAGTGAGTTTTGACTCTGCGGATTACATTGCAAAGGTCTCTGTGAACAATCCCTACCCACATCCTCTCCCCATCTGCGAGATCAAATACACTCTCAAAAGCGTTGGCAAGGTTATTGCATCTGGGAACATGCCAGACCCTGGCTCGATAAAGGCAAGTGGCACTACTGTATTGGAGGTGCCGGTGAAGGTGCCGCATAGTATTATTGTGACATTGGTAAAGGACGTTGCTAAGGATTGGGACATTGACTATGAGTTGGATTTGGGTCTCATCGTTGACCTTCCTGTAGTTGGGAACATTACCATACCACTCAATAGGAAGGGCGAAATCAAGCTTCCCACCTTATCTGAAGCCATTTGGGGTTCAAATGATGAAGCTGCAAAAGAGGCTTCCAAGGAGACTAAAAGGGAGATTGCAAACTAG

Protein Analysis

173

Amino Acids

18.6

Weight (kDa)

5.63

Isoelectric Point (pI)

19.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 274, 286
AccB7I CCANNNNNTGG 1 cut(s) 236
AciI CCGC 2 cut(s) 116, 290
AcuI CTGAAG 1 cut(s) 465
AdeI CACNNNGTG 1 cut(s) 34
AfiI CCNNNNNNNGG 2 cut(s) 236, 386
AgsI TTSAA 2 cut(s) 94, 462
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 2 cut(s) 430, 473
AluI AGCT 2 cut(s) 430, 473
Alw26I GTCTC 3 cut(s) 139, 368, 488
AlwNI CAGNNNCTG 1 cut(s) 236
AoxI GGCC 1 cut(s) 21
ApeKI GCWGC 1 cut(s) 473
AsuHPI GGTGA 1 cut(s) 292
BanI GGYRCC 2 cut(s) 274, 286
BbvI GCAGC 1 cut(s) 460
BccI CCATC 1 cut(s) 176
BciT130I CCWGG 1 cut(s) 237
BcoDI GTCTC 3 cut(s) 139, 368, 488
BfaI CTAG 1 cut(s) 517
BfmI CTRYAG 1 cut(s) 381
BisI GCNGC 2 cut(s) 290, 474
BlsI GCNGC 2 cut(s) 291, 475
Bme1390I CCNGG 1 cut(s) 237
BmiI GGNNCC 2 cut(s) 276, 288
BmrFI CCNGG 1 cut(s) 237
BmsI GCATC 2 cut(s) 58, 224
Bpu10I CCTNAGC 1 cut(s) 327
BsaI GGTCTC 2 cut(s) 139, 368
BsaJI CCNNGG 2 cut(s) 235, 489
BsaXI ACNNNNNCTCC 2 cut(s) 147, 177
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 386
Bse118I RCCGGY 1 cut(s) 277
Bse3DI GCAATG 1 cut(s) 123
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 2 cut(s) 235, 489
BseGI GGATG 1 cut(s) 157
BseLI CCNNNNNNNGG 2 cut(s) 236, 386
BseMI GCAATG 1 cut(s) 123
BseXI GCAGC 1 cut(s) 460
BshFI GGCC 1 cut(s) 23
BshNI GGYRCC 2 cut(s) 274, 286
BsiSI CCGG 1 cut(s) 278
BslFI GGGAC 1 cut(s) 350
BslI CCNNNNNNNGG 2 cut(s) 236, 386
BsmAI GTCTC 3 cut(s) 139, 368, 488
BsmFI GGGAC 1 cut(s) 350
BsnI GGCC 1 cut(s) 23
Bso31I GGTCTC 2 cut(s) 139, 368
Bsp143I GATC 1 cut(s) 177
BspACI CCGC 2 cut(s) 116, 290
BspANI GGCC 1 cut(s) 23
BspLI GGNNCC 2 cut(s) 276, 288
BspT107I GGYRCC 2 cut(s) 274, 286
BspTNI GGTCTC 2 cut(s) 139, 368
BsrDI GCAATG 1 cut(s) 123
BsrFI RCCGGY 1 cut(s) 277
BssAI RCCGGY 1 cut(s) 277
BssECI CCNNGG 2 cut(s) 235, 489
BssMI GATC 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 489
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 1 cut(s) 265
BstC8I GCNNGC 1 cut(s) 73
BstDEI CTNAG 1 cut(s) 327
BstF5I GGATG 1 cut(s) 157
BstKTI GATC 1 cut(s) 180
BstMAI GTCTC 3 cut(s) 139, 368, 488
BstMBI GATC 1 cut(s) 177
BstMWI GCNNNNNNNGC 1 cut(s) 482
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 1 cut(s) 229
BstSCI CCNGG 1 cut(s) 235
BstSFI CTRYAG 1 cut(s) 381
BstV1I GCAGC 1 cut(s) 460
BsuRI GGCC 1 cut(s) 23
BtsCI GGATG 1 cut(s) 157
Cac8I GCNNGC 1 cut(s) 73
CaiI CAGNNNCTG 1 cut(s) 236
Cfr10I RCCGGY 1 cut(s) 277
CviAII CATG 1 cut(s) 226
CviJI RGCY 8 cut(s) 23, 64, 75, 240, 430, 449, 473, 485
CviKI_1 RGCY 8 cut(s) 23, 64, 75, 240, 430, 449, 473, 485
DdeI CTNAG 1 cut(s) 327
DpnI GATC 1 cut(s) 179
DpnII GATC 1 cut(s) 177
DraIII CACNNNGTG 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 489
Eco31I GGTCTC 2 cut(s) 139, 368
Eco57I CTGAAG 1 cut(s) 465
EcoRII CCWGG 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 489
ErhI CCWWGG 1 cut(s) 489
FaeI CATG 1 cut(s) 229
FaiI YATR 5 cut(s) 33, 227, 294, 348, 401
FaqI GGGAC 1 cut(s) 350
FatI CATG 1 cut(s) 225
Fnu4HI GCNGC 2 cut(s) 290, 474
FokI GGATG 1 cut(s) 144
Fsp4HI GCNGC 2 cut(s) 290, 474
FspBI CTAG 1 cut(s) 517
GluI GCNGC 2 cut(s) 290, 474
HaeIII GGCC 1 cut(s) 23
HapII CCGG 1 cut(s) 278
Hin1II CATG 1 cut(s) 229
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HindIII AAGCTT 1 cut(s) 428
HinfI GANTC 1 cut(s) 110
HpaII CCGG 1 cut(s) 278
HphI GGTGA 1 cut(s) 292
Hpy166II GTNNAC 3 cut(s) 16, 142, 373
Hpy188I TCNGA 1 cut(s) 445
Hpy188III TCNNGA 1 cut(s) 94
Hpy8I GTNNAC 3 cut(s) 16, 142, 373
HpyAV CCTTC 3 cut(s) 277, 386, 409
HpyCH4III ACNGT 1 cut(s) 265
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 6 cut(s) 50, 71, 128, 215, 476, 512
HpyF10VI GCNNNNNNNGC 1 cut(s) 482
HpyF3I CTNAG 1 cut(s) 327
HpySE526I ACGT 1 cut(s) 321
Hsp92II CATG 1 cut(s) 229
Kzo9I GATC 1 cut(s) 177
LpnPI CCDG 7 cut(s) 78, 204, 222, 243, 249, 291, 393
Lsp1109I GCAGC 1 cut(s) 460
LweI GCATC 2 cut(s) 58, 224
MaeI CTAG 1 cut(s) 517
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 1 cut(s) 304
MalI GATC 1 cut(s) 179
MboI GATC 1 cut(s) 177
MlyI GAGTC 1 cut(s) 104
MmeI TCCRAC 1 cut(s) 333
MnlI CCTC 4 cut(s) 86, 171, 265, 475
MspI CCGG 1 cut(s) 278
MspR9I CCNGG 1 cut(s) 237
MvaI CCWGG 1 cut(s) 237
MwoI GCNNNNNNNGC 1 cut(s) 482
NdeII GATC 1 cut(s) 177
NlaIII CATG 1 cut(s) 229
NlaIV GGNNCC 2 cut(s) 276, 288
NmuCI GTSAC 1 cut(s) 304
NspI RCATGY 1 cut(s) 229
PflMI CCANNNNNTGG 1 cut(s) 236
PkrI GCNGC 2 cut(s) 291, 475
PleI GAGTC 1 cut(s) 104
PpsI GAGTC 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 235
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 2 cut(s) 276, 288
PsrI GAACNNNNNNTAC 2 cut(s) 134, 166
PstNI CAGNNNCTG 1 cut(s) 236
SatI GCNGC 2 cut(s) 290, 474
Sau3AI GATC 1 cut(s) 177
SchI GAGTC 1 cut(s) 104
ScrFI CCNGG 1 cut(s) 237
SetI ASST 9 cut(s) 135, 210, 276, 288, 324, 378, 432, 440, 475
SfaNI GCATC 2 cut(s) 58, 224
SfcI CTRYAG 1 cut(s) 381
SsiI CCGC 2 cut(s) 116, 290
SspMI CTAG 1 cut(s) 517
StyD4I CCNGG 1 cut(s) 235
StyI CCWWGG 1 cut(s) 489
TaaI ACNGT 1 cut(s) 265
TaiI ACGT 1 cut(s) 324
TaqI TCGA 1 cut(s) 242
TauI GCSGC 1 cut(s) 292
TseFI GTSAC 1 cut(s) 304
TseI GCWGC 1 cut(s) 473
Tsp45I GTSAC 1 cut(s) 304
TspDTI ATGAA 1 cut(s) 483
Van91I CCANNNNNTGG 1 cut(s) 236
XceI RCATGY 1 cut(s) 229
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XspI CTAG 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.