Prupe.2G179200_v2.0.a1

Delta(8)-fatty-acid desaturase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
22303387 .. 22306216
2830 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G179200.2

Sequence Viewer

Length: 1344 bp
ATGGAGGGTGAGAGGAAGTACATTACTGTTGAGCAGCTGAAGCTGCACAAGCAACCAGGGGACTTGTGGATCTCCATCAAGGGTAAGGTTTACAATGTCTCTGATTGGGCCAAAGATCACCCAGGTGGGGAAGCCGTTCTCTTCAATATGGCTGGCCAAGATGTCACTGATGGATTCATAGCATACCATCCTGCCTCCGCATGGCAGTACCTGGGAAAATTCTTTACTGGGTATTATCTAAAAGATTTCCAGATCTCAGAGGTGTCCAAGGACTATAGGAAACTTGCTTCAGAGTTTAACCAATTGGGTTTGTTTGAAAACAAAGGGCATGGGGCTCTTTACTCTGTGATAAGTCTTGTGGTAATGCTTTCCCTTGTTGTCTATGGTGTATTGAAGTCTGAGAGTGTGTTGGTCCATTTGGGTTGTGGTTTGTTGTTGGGGGTCCTCTGGGTTCAGGCTGCCTATATGGGTCATGACTCTGGCCATTACCAGGTCATGTCCAGCCGGACCTACAACAAAATGGCTCAGTTTGTGGCTGGAAATTGCCTTACTGGGATCAGTATTGCTTGGTGGAAATGGACTCACAATGCCCACCATATTGCCTGCAACAGCCTTGATTATGATCCTGATCTTCAACACATGCCAGTCTTTGCAGTGTCCACAAAATTCTTTCATTCAATAACATCGGTCTTTTATGGAAGAGAGCTAACCTTTGATCCTGTGGCTAGATTTTTAGTCAGCCACCAGCATTTTACATATTATCCGATCATGATTGTTGGAAGGGTTAACTTGTTTATACAGACCTTCTTGTTATTGTTCTCGAAGAGAAGCATCCCAGATAGAGGTTTGAACATATTGGGAATCCTTGTTTTCTGGACTTGGTTTCCTCTCCTTGTTTCATGTCTGCCCAATTGGAGCGAGAGGGTGATGTTTGTGCTTGCGAGCTTTGCAGTGACAGCACTTCAGCACATTCAGTTCACTTTGAACCATTTCACCGGAGATACTTATCTTGGACCACCAACTGGGAATGATTGGTTTGAGAAGCAGACAGCTGGTACTGTGGATATTTCTTGCTCAAGTTGGATGGACTGGTTCTATGGTGGGCTACAGTTTCAGCTTGAGCACCATTTGTTCCCCCGACTACCCCGTTCCCAGCTTAGGAAGATTTCTCCTACTGTGAAGGACCTATGCAAGAAGCACAATTTGCCTTACAAGAGTTTGTCCTTCTGGGATGCCAATGTAACCACTATTAGGCTTCTAAGGTCTGCTGCCCAGAAGGCTTGGGACATGGATATTCCAATCCCGAAGAACTTGGCCTGGGAAGCTGTTAATACCCATGGCTGA

Protein Analysis

448

Amino Acids

51.06

Weight (kDa)

8.56

Isoelectric Point (pI)

35.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1022
AciI CCGC 1 cut(s) 198
AclWI GGATC 4 cut(s) 77, 563, 617, 710
AcoI YGGCCR 2 cut(s) 154, 481
AcsI RAATTY 2 cut(s) 218, 665
AcuI CTGAAG 3 cut(s) 59, 273, 947
AfaI GTAC 3 cut(s) 20, 209, 1057
AfiI CCNNNNNNNGG 7 cut(s) 127, 201, 490, 842, 1022, 1158, 1251
AgsI TTSAA 7 cut(s) 145, 317, 394, 635, 678, 850, 985
AjnI CCWGG 5 cut(s) 55, 121, 210, 489, 1316
AleI CACNNNNGTG 1 cut(s) 123
AluBI AGCT 8 cut(s) 37, 43, 706, 945, 1052, 1117, 1156, 1325
AluI AGCT 8 cut(s) 37, 43, 706, 945, 1052, 1117, 1156, 1325
Alw21I GWGCWC 1 cut(s) 1125
Alw26I GTCTC 1 cut(s) 103
AlwI GGATC 4 cut(s) 77, 563, 617, 710
AlwNI CAGNNNCTG 1 cut(s) 211
AoxI GGCC 4 cut(s) 108, 154, 481, 1314
ApeKI GCWGC 4 cut(s) 34, 43, 458, 1268
ApoI RAATTY 2 cut(s) 218, 665
Asp700I GAANNNNTTC 2 cut(s) 135, 989
AspS9I GGNCC 6 cut(s) 108, 412, 442, 507, 1013, 1183
AsuHPI GGTGA 4 cut(s) 20, 110, 937, 985
AvaII GGWCC 5 cut(s) 412, 442, 507, 1013, 1183
BalI TGGCCA 2 cut(s) 156, 483
BanII GRGCYC 1 cut(s) 337
Bbv12I GWGCWC 1 cut(s) 1125
BbvI GCAGC 4 cut(s) 30, 46, 445, 1255
BccI CCATC 4 cut(s) 83, 164, 195, 1078
BceAI ACGGC 1 cut(s) 119
BciT130I CCWGG 5 cut(s) 57, 123, 212, 491, 1318
BcoDI GTCTC 1 cut(s) 103
BfaI CTAG 1 cut(s) 726
BfmI CTRYAG 2 cut(s) 274, 1106
BglI GCCNNNNNGGC 1 cut(s) 1277
BglII AGATCT 1 cut(s) 252
BisI GCNGC 4 cut(s) 35, 44, 459, 1269
BlsI GCNGC 4 cut(s) 36, 45, 460, 1270
Bme1390I CCNGG 5 cut(s) 57, 123, 212, 491, 1318
Bme18I GGWCC 5 cut(s) 412, 442, 507, 1013, 1183
BmgT120I GGNCC 6 cut(s) 108, 412, 442, 507, 1013, 1183
BmiI GGNNCC 1 cut(s) 443
BmrFI CCNGG 5 cut(s) 57, 123, 212, 491, 1318
BmrI ACTGGG 3 cut(s) 237, 561, 1032
BmsI GCATC 2 cut(s) 840, 1222
BmuI ACTGGG 3 cut(s) 237, 561, 1032
Bpu10I CCTNAGC 1 cut(s) 1157
BpuEI CTTGAG 2 cut(s) 1060, 1139
BsaBI GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BsaJI CCNNGG 6 cut(s) 56, 121, 211, 267, 1317, 1336
BsaWI WCCGGW 1 cut(s) 995
Bsc4I CCNNNNNNNGG 7 cut(s) 127, 201, 490, 842, 1022, 1158, 1251
Bse1I ACTGG 5 cut(s) 232, 556, 644, 1027, 1094
Bse8I GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BseBI CCWGG 5 cut(s) 57, 123, 212, 491, 1318
BseDI CCNNGG 6 cut(s) 56, 121, 211, 267, 1317, 1336
BseGI GGATG 4 cut(s) 187, 831, 1089, 1237
BseJI GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BseLI CCNNNNNNNGG 7 cut(s) 127, 201, 490, 842, 1022, 1158, 1251
BseMII CTCAG 3 cut(s) 270, 390, 539
BseNI ACTGG 5 cut(s) 232, 556, 644, 1027, 1094
BseXI GCAGC 4 cut(s) 30, 46, 445, 1255
BseYI CCCAGC 1 cut(s) 1152
BsgI GTGCAG 1 cut(s) 29
BshFI GGCC 4 cut(s) 110, 156, 483, 1316
BsiHKAI GWGCWC 1 cut(s) 1125
BsiSI CCGG 2 cut(s) 505, 996
BslFI GGGAC 2 cut(s) 74, 1298
BslI CCNNNNNNNGG 7 cut(s) 127, 201, 490, 842, 1022, 1158, 1251
BsmAI GTCTC 1 cut(s) 103
BsmFI GGGAC 2 cut(s) 74, 1298
BsnI GGCC 4 cut(s) 110, 156, 483, 1316
Bsp1286I GDGCHC 2 cut(s) 337, 1125
Bsp143I GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
Bsp19I CCATGG 1 cut(s) 1336
BspACI CCGC 1 cut(s) 198
BspANI GGCC 4 cut(s) 110, 156, 483, 1316
BspCNI CTCAG 3 cut(s) 269, 391, 538
BspHI TCATGA 2 cut(s) 472, 768
BspLI GGNNCC 1 cut(s) 443
BspPI GGATC 4 cut(s) 77, 563, 617, 710
BsrI ACTGG 5 cut(s) 232, 556, 644, 1027, 1094
BssECI CCNNGG 6 cut(s) 56, 121, 211, 267, 1317, 1336
BssMI GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
BssT1I CCWWGG 2 cut(s) 267, 1336
Bst2UI CCWGG 5 cut(s) 57, 123, 212, 491, 1318
Bst4CI ACNGT 4 cut(s) 28, 1060, 1110, 1177
Bst6I CTCTTC 3 cut(s) 146, 694, 818
BstAPI GCANNNNNTGC 1 cut(s) 1204
BstC8I GCNNGC 4 cut(s) 154, 604, 939, 943
BstDEI CTNAG 5 cut(s) 256, 399, 525, 1157, 1259
BstDSI CCRYGG 1 cut(s) 1336
BstF5I GGATG 4 cut(s) 187, 831, 1089, 1237
BstKTI GATC 8 cut(s) 72, 118, 255, 558, 625, 631, 718, 768
BstMAI GTCTC 1 cut(s) 103
BstMBI GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
BstMWI GCNNNNNNNGC 8 cut(s) 40, 43, 49, 947, 956, 1204, 1277, 1322
BstNI CCWGG 5 cut(s) 57, 123, 212, 491, 1318
BstNSI RCATGY 1 cut(s) 643
BstSCI CCNGG 5 cut(s) 55, 121, 210, 489, 1316
BstSFI CTRYAG 2 cut(s) 274, 1106
BstV1I GCAGC 4 cut(s) 30, 46, 445, 1255
BstX2I RGATCY 2 cut(s) 69, 252
BstYI RGATCY 2 cut(s) 69, 252
BsuRI GGCC 4 cut(s) 110, 156, 483, 1316
BtgI CCRYGG 1 cut(s) 1336
BtsCI GGATG 4 cut(s) 187, 831, 1089, 1237
BtsI GCAGTG 2 cut(s) 660, 957
BtsIMutI CAGTG 3 cut(s) 165, 660, 957
Cac8I GCNNGC 4 cut(s) 154, 604, 939, 943
CaiI CAGNNNCTG 1 cut(s) 211
CciI TCATGA 2 cut(s) 472, 768
Cfr13I GGNCC 6 cut(s) 108, 412, 442, 507, 1013, 1183
CsiI ACCWGGT 1 cut(s) 489
Csp6I GTAC 3 cut(s) 19, 208, 1056
CviAII CATG 9 cut(s) 201, 329, 473, 496, 640, 769, 900, 1288, 1337
CviQI GTAC 3 cut(s) 19, 208, 1056
DdeI CTNAG 5 cut(s) 256, 399, 525, 1157, 1259
DpnI GATC 8 cut(s) 71, 117, 254, 557, 624, 630, 717, 767
DpnII GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
EaeI YGGCCR 2 cut(s) 154, 481
Eam1104I CTCTTC 3 cut(s) 146, 694, 818
EarI CTCTTC 3 cut(s) 146, 694, 818
Eco130I CCWWGG 2 cut(s) 267, 1336
Eco24I GRGCYC 1 cut(s) 337
Eco47I GGWCC 5 cut(s) 412, 442, 507, 1013, 1183
Eco57I CTGAAG 3 cut(s) 59, 273, 947
EcoO109I RGGNCCY 2 cut(s) 442, 1183
EcoRII CCWGG 5 cut(s) 55, 121, 210, 489, 1316
EcoT14I CCWWGG 2 cut(s) 267, 1336
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 2 cut(s) 267, 1336
FaeI CATG 9 cut(s) 204, 332, 476, 499, 643, 772, 903, 1291, 1340
FaqI GGGAC 2 cut(s) 74, 1298
FatI CATG 9 cut(s) 200, 328, 472, 495, 639, 768, 899, 1287, 1336
Fnu4HI GCNGC 4 cut(s) 35, 44, 459, 1269
FokI GGATG 4 cut(s) 174, 818, 1096, 1244
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 4 cut(s) 35, 44, 459, 1269
FspBI CTAG 1 cut(s) 726
GluI GCNGC 4 cut(s) 35, 44, 459, 1269
GsaI CCCAGC 1 cut(s) 1156
HaeIII GGCC 4 cut(s) 110, 156, 483, 1316
HapII CCGG 2 cut(s) 505, 996
Hin1II CATG 9 cut(s) 204, 332, 476, 499, 643, 772, 903, 1291, 1340
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HinfI GANTC 4 cut(s) 174, 476, 580, 861
HpaI GTTAAC 1 cut(s) 787
HpaII CCGG 2 cut(s) 505, 996
HphI GGTGA 4 cut(s) 20, 110, 937, 985
Hpy166II GTNNAC 4 cut(s) 91, 660, 787, 978
Hpy188I TCNGA 5 cut(s) 103, 259, 292, 400, 765
Hpy188III TCNNGA 7 cut(s) 250, 473, 626, 769, 820, 874, 1303
Hpy8I GTNNAC 4 cut(s) 91, 660, 787, 978
HpyAV CCTTC 5 cut(s) 774, 814, 1174, 1234, 1270
HpyCH4III ACNGT 4 cut(s) 28, 1060, 1110, 1177
HpyCH4V TGCA 5 cut(s) 46, 606, 653, 950, 1191
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 43, 49, 947, 956, 1204, 1277, 1322
HpyF3I CTNAG 5 cut(s) 256, 399, 525, 1157, 1259
Hsp92II CATG 9 cut(s) 204, 332, 476, 499, 643, 772, 903, 1291, 1340
KspAI GTTAAC 1 cut(s) 787
Kzo9I GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
LmnI GCTCC 1 cut(s) 915
Lsp1109I GCAGC 4 cut(s) 30, 46, 445, 1255
LweI GCATC 2 cut(s) 840, 1222
MabI ACCWGGT 1 cut(s) 489
MaeI CTAG 1 cut(s) 726
MaeIII GTNAC 3 cut(s) 163, 952, 1240
MalI GATC 8 cut(s) 71, 117, 254, 557, 624, 630, 717, 767
MboI GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
MboII GAAGA 6 cut(s) 133, 623, 711, 835, 1174, 1318
MfeI CAATTG 2 cut(s) 302, 910
MflI RGATCY 2 cut(s) 69, 252
MhlI GDGCHC 2 cut(s) 337, 1125
MlsI TGGCCA 2 cut(s) 156, 483
MluCI AATT 6 cut(s) 218, 302, 541, 665, 910, 1201
MluNI TGGCCA 2 cut(s) 156, 483
MlyI GAGTC 2 cut(s) 470, 574
MmeI TCCRAC 2 cut(s) 757, 1061
MnlI CCTC 7 cut(s) 6, 205, 253, 455, 836, 897, 915
Mox20I TGGCCA 2 cut(s) 156, 483
MroXI GAANNNNTTC 2 cut(s) 135, 989
MscI TGGCCA 2 cut(s) 156, 483
MseI TTAA 3 cut(s) 297, 786, 1329
MslI CAYNNNNRTG 1 cut(s) 123
Msp20I TGGCCA 2 cut(s) 156, 483
MspA1I CMGCKG 2 cut(s) 37, 1052
MspI CCGG 2 cut(s) 505, 996
MspR9I CCNGG 5 cut(s) 57, 123, 212, 491, 1318
MunI CAATTG 2 cut(s) 302, 910
MvaI CCWGG 5 cut(s) 57, 123, 212, 491, 1318
MwoI GCNNNNNNNGC 8 cut(s) 40, 43, 49, 947, 956, 1204, 1277, 1322
NcoI CCATGG 1 cut(s) 1336
NdeII GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
NlaIII CATG 9 cut(s) 204, 332, 476, 499, 643, 772, 903, 1291, 1340
NlaIV GGNNCC 1 cut(s) 443
NmuCI GTSAC 2 cut(s) 163, 952
NspI RCATGY 1 cut(s) 643
OliI CACNNNNGTG 1 cut(s) 123
PagI TCATGA 2 cut(s) 472, 768
PdmI GAANNNNTTC 2 cut(s) 135, 989
PfeI GAWTC 2 cut(s) 174, 861
PflMI CCANNNNNTGG 1 cut(s) 1022
PkrI GCNGC 4 cut(s) 36, 45, 460, 1270
PleI GAGTC 2 cut(s) 470, 574
PpsI GAGTC 2 cut(s) 470, 574
PpuMI RGGWCCY 2 cut(s) 442, 1183
Psp5II RGGWCCY 2 cut(s) 442, 1183
Psp6I CCWGG 5 cut(s) 55, 121, 210, 489, 1316
PspFI CCCAGC 1 cut(s) 1152
PspGI CCWGG 5 cut(s) 55, 121, 210, 489, 1316
PspN4I GGNNCC 1 cut(s) 443
PspPI GGNCC 6 cut(s) 108, 412, 442, 507, 1013, 1183
PspPPI RGGWCCY 2 cut(s) 442, 1183
PstNI CAGNNNCTG 1 cut(s) 211
PsuI RGATCY 2 cut(s) 69, 252
PvuII CAGCTG 2 cut(s) 37, 1052
RsaI GTAC 3 cut(s) 20, 209, 1057
RsaNI GTAC 3 cut(s) 19, 208, 1056
RseI CAYNNNNRTG 1 cut(s) 123
SaqAI TTAA 3 cut(s) 297, 786, 1329
SatI GCNGC 4 cut(s) 35, 44, 459, 1269
Sau3AI GATC 8 cut(s) 69, 115, 252, 555, 622, 628, 715, 765
Sau96I GGNCC 6 cut(s) 108, 412, 442, 507, 1013, 1183
SchI GAGTC 2 cut(s) 470, 574
ScrFI CCNGG 5 cut(s) 57, 123, 212, 491, 1318
SduI GDGCHC 2 cut(s) 337, 1125
SexAI ACCWGGT 1 cut(s) 489
SfaNI GCATC 2 cut(s) 840, 1222
SfcI CTRYAG 2 cut(s) 274, 1106
SinI GGWCC 5 cut(s) 412, 442, 507, 1013, 1183
SmiMI CAYNNNNRTG 1 cut(s) 123
SmlI CTYRAG 2 cut(s) 1075, 1118
SmoI CTYRAG 2 cut(s) 1075, 1118
Sse9I AATT 6 cut(s) 218, 302, 541, 665, 910, 1201
SsiI CCGC 1 cut(s) 198
SspMI CTAG 1 cut(s) 726
StyD4I CCNGG 5 cut(s) 55, 121, 210, 489, 1316
StyI CCWWGG 2 cut(s) 267, 1336
TaaI ACNGT 4 cut(s) 28, 1060, 1110, 1177
TaqI TCGA 1 cut(s) 821
TaqII GACCGA 1 cut(s) 676
TasI AATT 6 cut(s) 218, 302, 541, 665, 910, 1201
TatI WGTACW 1 cut(s) 18
TfiI GAWTC 2 cut(s) 174, 861
Tru1I TTAA 3 cut(s) 297, 786, 1329
Tru9I TTAA 3 cut(s) 297, 786, 1329
TscAI CASTG 3 cut(s) 172, 660, 957
TseFI GTSAC 2 cut(s) 163, 952
TseI GCWGC 4 cut(s) 34, 43, 458, 1268
Tsp45I GTSAC 2 cut(s) 163, 952
TspDTI ATGAA 3 cut(s) 166, 662, 888
TspRI CASTG 3 cut(s) 172, 660, 957
Van91I CCANNNNNTGG 1 cut(s) 1022
VpaK11BI GGWCC 5 cut(s) 412, 442, 507, 1013, 1183
XapI RAATTY 2 cut(s) 218, 665
XceI RCATGY 1 cut(s) 643
XcmI CCANNNNNNNNNTGG 2 cut(s) 63, 422
XmnI GAANNNNTTC 2 cut(s) 135, 989
XspI CTAG 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.