Prupe.2G179400_v2.0.a1

Delta(8)-fatty-acid desaturase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
22311054 .. 22312397
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G179400.1

Sequence Viewer

Length: 1344 bp
ATGGAGGGAGAGAGGAAGTACATTACGTGTGAGGAGCTGAAGGAGCACAACAAGCCAGGGGACTTGTGGATCTCTATCCAGGGTAAGGTTTACAATGTCTCTGATTGGGCCAAGGAACACCCTGGTGGGGATACAATTCTCTTCAATTTGGCTGGTCAAGAGGTCACTGATGCATTCATAGCATACCATCCTAGCACTGCATGGCAGTACCTGAACAAATTATTCACTGGGTATTATCTAAAAGATTTCAAGGTCTCTGAGGTGTCCAAGGACTATAGGAGGATGGCCTCTGAGTTTTCCAGACTGGGTTTGTTCGAAAAGAAAGGGCATGGTGCTATGTACTCTATTCTGATCATTACAACCCTGCTTCACCTTGTTGTGTATGGTGTGTTGAAATCTGAGAGTGTTTTGGTCCATTTGGTTTGTGGTATGATGTTGGGAGCGCTCTGGATTGAGGGTGCTTATATTGGTCATGATGCTGGCCATTACCAGATCATGTCAAGCAGAAAGTGCAACGACATTGCTCAGATTCTGGCTGGGAATTGCCTTACTGGGATCAGCATTGCTTGGTGGAAATGGACTCACAATGCTCACCACATTGCCTGCAACAGCCTTGATTATGATCCTGATCTCCAGCACATTCCAGTCTTTGCAGTGTCCACAAAATTCTTTAATTCAATCACATCAATCTTTTACGGTAGGGAGTTGAAGTTTGATCCTGTGGCTAGATTTTTAATCAGCTACCAGCATTTTACATATTACCCAGTCATGGTGGTTGGAAGGGTTAACTTGTTCATACAAACATTCTTGTTATTGTTCTCAAGGGGTAATGTCCCGCACAGAGCTTTGAACATAATGGGGATCCTTGTTTTCTGGACTTGGTTTCCTCTTCTTGTTTCATGCCTGCCCACTTGGAGTGAGAGGGTGATGTTTGTGCTGGCCAGCTTTACAGTGACAGCACTTCAGCACATCCAATTCACCTTGAACCATTTCTCAGGAGATACATATCTTGGACCACCCACATCAAGTGATTGGTTTGAGAAGCAAGCAGCAGGGACTTTGGATATTTCTTGCTCAACTAGGATGGATTGGTTCTTTGGTGGCCTGCAATTTCAGCTTGAGCACCATTTGTTTCCCAGGTTGCCTCGTTGCCAGCTGAGGACGATTGCTCCTACTGTTAAGGACCTATGCAAGAAGCACAATTTGCCTTACAGGAGCTTGTCCTTCTGGGAGGCCAATATGTCCACCATTAGGACTCTAAGGACTGCTGCCCTGCAGGCCAGGGACCTGTCCAATCCTGTCCCAAAGAACTTAGTCTGGGAAGCTCTGAATACCCATGGCTGA

Protein Analysis

448

Amino Acids

51.2

Weight (kDa)

8.46

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 836
AclWI GGATC 6 cut(s) 77, 563, 617, 710, 856, 869
AcoI YGGCCR 2 cut(s) 481, 939
AcsI RAATTY 1 cut(s) 665
AcuI CTGAAG 2 cut(s) 59, 947
AfaI GTAC 3 cut(s) 20, 209, 341
AfeI AGCGCT 1 cut(s) 444
AfiI CCNNNNNNNGG 4 cut(s) 85, 127, 769, 1251
AflIII ACRYGT 1 cut(s) 26
AgsI TTSAA 7 cut(s) 145, 250, 394, 678, 709, 850, 985
AjnI CCWGG 5 cut(s) 55, 78, 121, 1136, 1280
AleI CACNNNNGTG 1 cut(s) 123
AluBI AGCT 8 cut(s) 37, 741, 845, 945, 1117, 1156, 1218, 1325
AluI AGCT 8 cut(s) 37, 741, 845, 945, 1117, 1156, 1218, 1325
Alw21I GWGCWC 2 cut(s) 48, 1125
Alw26I GTCTC 2 cut(s) 103, 259
AlwI GGATC 6 cut(s) 77, 563, 617, 710, 856, 869
AlwNI CAGNNNCTG 2 cut(s) 211, 532
Aor51HI AGCGCT 1 cut(s) 444
AoxI GGCC 7 cut(s) 108, 285, 481, 939, 1102, 1233, 1278
ApeKI GCWGC 2 cut(s) 1049, 1268
ApoI RAATTY 1 cut(s) 665
Asp700I GAANNNNTTC 1 cut(s) 989
AspLEI GCGC 1 cut(s) 445
AspS9I GGNCC 5 cut(s) 108, 412, 1013, 1183, 1285
AsuHPI GGTGA 4 cut(s) 362, 584, 937, 970
AsuII TTCGAA 1 cut(s) 315
AvaII GGWCC 4 cut(s) 412, 1013, 1183, 1285
BalI TGGCCA 2 cut(s) 483, 941
BamHI GGATCC 1 cut(s) 861
Bbv12I GWGCWC 2 cut(s) 48, 1125
BbvCI CCTCAGC 1 cut(s) 1157
BbvI GCAGC 2 cut(s) 1061, 1255
BccI CCATC 3 cut(s) 195, 277, 1078
BciT130I CCWGG 5 cut(s) 57, 80, 123, 1138, 1282
BciVI GTATCC 1 cut(s) 124
BclI TGATCA 1 cut(s) 351
BcoDI GTCTC 2 cut(s) 103, 259
BfaI CTAG 3 cut(s) 192, 726, 1080
BfmI CTRYAG 2 cut(s) 274, 1274
BfoI RGCGCY 1 cut(s) 446
BfuI GTATCC 1 cut(s) 124
BglI GCCNNNNNGGC 1 cut(s) 1277
BisI GCNGC 2 cut(s) 1050, 1269
BlsI GCNGC 2 cut(s) 1051, 1270
Bme1390I CCNGG 5 cut(s) 57, 80, 123, 1138, 1282
Bme18I GGWCC 4 cut(s) 412, 1013, 1183, 1285
BmgT120I GGNCC 5 cut(s) 108, 412, 1013, 1183, 1285
BmiI GGNNCC 2 cut(s) 863, 1286
BmrFI CCNGG 5 cut(s) 57, 80, 123, 1138, 1282
BmrI ACTGGG 4 cut(s) 237, 314, 561, 758
BmsI GCATC 2 cut(s) 160, 466
BmuI ACTGGG 4 cut(s) 237, 314, 561, 758
BpmI CTGGAG 1 cut(s) 617
Bpu10I CCTNAGC 1 cut(s) 1157
Bpu14I TTCGAA 1 cut(s) 315
BpuEI CTTGAG 2 cut(s) 805, 1139
BsaAI YACGTR 1 cut(s) 27
BsaBI GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BsaI GGTCTC 1 cut(s) 259
BsaJI CCNNGG 8 cut(s) 56, 79, 111, 121, 267, 1136, 1281, 1336
BsaXI ACNNNNNCTCC 4 cut(s) 695, 725, 1153, 1183
Bsc4I CCNNNNNNNGG 4 cut(s) 85, 127, 769, 1251
Bse1I ACTGG 5 cut(s) 232, 309, 556, 644, 764
Bse3DI GCAATG 3 cut(s) 519, 561, 597
Bse8I GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BseBI CCWGG 5 cut(s) 57, 80, 123, 1138, 1282
BseDI CCNNGG 8 cut(s) 56, 79, 111, 121, 267, 1136, 1281, 1336
BseGI GGATG 4 cut(s) 187, 288, 969, 1089
BseJI GATNNNNATC 4 cut(s) 74, 621, 627, 1005
BseLI CCNNNNNNNGG 4 cut(s) 85, 127, 769, 1251
BseMI GCAATG 3 cut(s) 519, 561, 597
BseMII CTCAG 6 cut(s) 249, 282, 390, 539, 1008, 1148
BseNI ACTGG 5 cut(s) 232, 309, 556, 644, 764
BseRI GAGGAG 1 cut(s) 47
BseXI GCAGC 2 cut(s) 1061, 1255
BseYI CCCAGC 1 cut(s) 536
BshFI GGCC 7 cut(s) 110, 287, 483, 941, 1104, 1235, 1280
BsiHKAI GWGCWC 2 cut(s) 48, 1125
BslFI GGGAC 5 cut(s) 74, 818, 1069, 1286, 1298
BslI CCNNNNNNNGG 4 cut(s) 85, 127, 769, 1251
BsmAI GTCTC 2 cut(s) 103, 259
BsmFI GGGAC 5 cut(s) 74, 818, 1069, 1286, 1298
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 7 cut(s) 110, 287, 483, 941, 1104, 1235, 1280
Bso31I GGTCTC 1 cut(s) 259
Bsp119I TTCGAA 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 48, 1125
Bsp143I GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
Bsp19I CCATGG 1 cut(s) 1336
BspACI CCGC 1 cut(s) 836
BspANI GGCC 7 cut(s) 110, 287, 483, 941, 1104, 1235, 1280
BspCNI CTCAG 6 cut(s) 250, 283, 391, 538, 1007, 1149
BspHI TCATGA 1 cut(s) 472
BspLI GGNNCC 2 cut(s) 863, 1286
BspMAI CTGCAG 1 cut(s) 1278
BspPI GGATC 6 cut(s) 77, 563, 617, 710, 856, 869
BspT104I TTCGAA 1 cut(s) 315
BspTNI GGTCTC 1 cut(s) 259
BsrDI GCAATG 3 cut(s) 519, 561, 597
BsrI ACTGG 5 cut(s) 232, 309, 556, 644, 764
BssECI CCNNGG 8 cut(s) 56, 79, 111, 121, 267, 1136, 1281, 1336
BssMI GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
BssT1I CCWWGG 3 cut(s) 111, 267, 1336
Bst2UI CCWGG 5 cut(s) 57, 80, 123, 1138, 1282
Bst4CI ACNGT 3 cut(s) 698, 952, 1177
Bst6I CTCTTC 2 cut(s) 146, 894
BstAPI GCANNNNNTGC 2 cut(s) 510, 1204
BstBAI YACGTR 1 cut(s) 27
BstBI TTCGAA 1 cut(s) 315
BstC8I GCNNGC 9 cut(s) 481, 604, 905, 939, 943, 1047, 1106, 1154, 1278
BstDEI CTNAG 8 cut(s) 258, 291, 399, 525, 994, 1157, 1259, 1312
BstDSI CCRYGG 1 cut(s) 1336
BstF5I GGATG 4 cut(s) 187, 288, 969, 1089
BstH2I RGCGCY 1 cut(s) 446
BstHHI GCGC 1 cut(s) 445
BstKTI GATC 8 cut(s) 72, 354, 495, 558, 625, 631, 718, 864
BstMAI GTCTC 2 cut(s) 103, 259
BstMBI GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
BstMWI GCNNNNNNNGC 7 cut(s) 43, 52, 179, 510, 1114, 1204, 1277
BstNI CCWGG 5 cut(s) 57, 80, 123, 1138, 1282
BstSCI CCNGG 5 cut(s) 55, 78, 121, 1136, 1280
BstSFI CTRYAG 2 cut(s) 274, 1274
BstV1I GCAGC 2 cut(s) 1061, 1255
BstX2I RGATCY 2 cut(s) 69, 861
BstYI RGATCY 2 cut(s) 69, 861
BsuI GTATCC 1 cut(s) 124
BsuRI GGCC 7 cut(s) 110, 287, 483, 941, 1104, 1235, 1280
BtgI CCRYGG 1 cut(s) 1336
BtsCI GGATG 4 cut(s) 187, 288, 969, 1089
BtsI GCAGTG 2 cut(s) 195, 660
BtsIMutI CAGTG 5 cut(s) 165, 195, 225, 660, 957
Cac8I GCNNGC 9 cut(s) 481, 604, 905, 939, 943, 1047, 1106, 1154, 1278
CaiI CAGNNNCTG 2 cut(s) 211, 532
CciI TCATGA 1 cut(s) 472
CfoI GCGC 1 cut(s) 445
Cfr13I GGNCC 5 cut(s) 108, 412, 1013, 1183, 1285
Csp6I GTAC 3 cut(s) 19, 208, 340
CviAII CATG 7 cut(s) 201, 329, 473, 496, 769, 900, 1337
CviQI GTAC 3 cut(s) 19, 208, 340
DdeI CTNAG 8 cut(s) 258, 291, 399, 525, 994, 1157, 1259, 1312
DpnI GATC 8 cut(s) 71, 353, 494, 557, 624, 630, 717, 863
DpnII GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
EaeI YGGCCR 2 cut(s) 481, 939
Eam1104I CTCTTC 2 cut(s) 146, 894
EarI CTCTTC 2 cut(s) 146, 894
Eco130I CCWWGG 3 cut(s) 111, 267, 1336
Eco31I GGTCTC 1 cut(s) 259
Eco47I GGWCC 4 cut(s) 412, 1013, 1183, 1285
Eco47III AGCGCT 1 cut(s) 444
Eco57I CTGAAG 2 cut(s) 59, 947
EcoO109I RGGNCCY 2 cut(s) 1183, 1285
EcoRII CCWGG 5 cut(s) 55, 78, 121, 1136, 1280
EcoT14I CCWWGG 3 cut(s) 111, 267, 1336
EcoT22I ATGCAT 1 cut(s) 175
ErhI CCWWGG 3 cut(s) 111, 267, 1336
FaeI CATG 7 cut(s) 204, 332, 476, 499, 772, 903, 1340
FaqI GGGAC 5 cut(s) 74, 818, 1069, 1286, 1298
FatI CATG 7 cut(s) 200, 328, 472, 495, 768, 899, 1336
FauI CCCGC 1 cut(s) 843
FbaI TGATCA 1 cut(s) 351
Fnu4HI GCNGC 2 cut(s) 1050, 1269
FokI GGATG 4 cut(s) 174, 295, 956, 1096
Fsp4HI GCNGC 2 cut(s) 1050, 1269
FspBI CTAG 3 cut(s) 192, 726, 1080
GlaI GCGC 1 cut(s) 444
GluI GCNGC 2 cut(s) 1050, 1269
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 1 cut(s) 617
HaeII RGCGCY 1 cut(s) 446
HaeIII GGCC 7 cut(s) 110, 287, 483, 941, 1104, 1235, 1280
HhaI GCGC 1 cut(s) 445
Hin1II CATG 7 cut(s) 204, 332, 476, 499, 772, 903, 1340
Hin6I GCGC 1 cut(s) 443
HinP1I GCGC 1 cut(s) 443
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HinfI GANTC 3 cut(s) 529, 580, 1255
HpaI GTTAAC 1 cut(s) 787
HphI GGTGA 4 cut(s) 362, 584, 937, 970
Hpy166II GTNNAC 4 cut(s) 91, 660, 787, 1245
Hpy188I TCNGA 7 cut(s) 103, 259, 292, 351, 400, 528, 1329
Hpy188III TCNNGA 7 cut(s) 158, 300, 448, 473, 626, 874, 996
Hpy8I GTNNAC 4 cut(s) 91, 660, 787, 1245
HpyAV CCTTC 3 cut(s) 34, 774, 1234
HpyCH4III ACNGT 3 cut(s) 698, 952, 1177
HpyCH4IV ACGT 1 cut(s) 26
HpyCH4V TGCA 8 cut(s) 173, 200, 513, 606, 653, 1108, 1191, 1276
HpyF10VI GCNNNNNNNGC 7 cut(s) 43, 52, 179, 510, 1114, 1204, 1277
HpyF3I CTNAG 8 cut(s) 258, 291, 399, 525, 994, 1157, 1259, 1312
HpySE526I ACGT 1 cut(s) 26
Hsp92II CATG 7 cut(s) 204, 332, 476, 499, 772, 903, 1340
HspAI GCGC 1 cut(s) 443
Ksp22I TGATCA 1 cut(s) 351
KspAI GTTAAC 1 cut(s) 787
Kzo9I GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
LmnI GCTCC 5 cut(s) 34, 43, 440, 1174, 1215
Lsp1109I GCAGC 2 cut(s) 1061, 1255
LweI GCATC 2 cut(s) 160, 466
MaeI CTAG 3 cut(s) 192, 726, 1080
MaeII ACGT 1 cut(s) 26
MaeIII GTNAC 2 cut(s) 163, 952
MalI GATC 8 cut(s) 71, 353, 494, 557, 624, 630, 717, 863
MboI GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
MboII GAAGA 2 cut(s) 133, 881
MflI RGATCY 2 cut(s) 69, 861
MhlI GDGCHC 2 cut(s) 48, 1125
MlsI TGGCCA 2 cut(s) 483, 941
MluCI AATT 9 cut(s) 135, 145, 218, 541, 665, 673, 974, 1109, 1201
MluNI TGGCCA 2 cut(s) 483, 941
MlyI GAGTC 2 cut(s) 574, 1249
MmeI TCCRAC 1 cut(s) 757
Mox20I TGGCCA 2 cut(s) 483, 941
Mph1103I ATGCAT 1 cut(s) 175
MroXI GAANNNNTTC 1 cut(s) 989
MscI TGGCCA 2 cut(s) 483, 941
MseI TTAA 4 cut(s) 672, 734, 786, 1179
MslI CAYNNNNRTG 1 cut(s) 123
Msp20I TGGCCA 2 cut(s) 483, 941
MspA1I CMGCKG 1 cut(s) 1156
MspR9I CCNGG 5 cut(s) 57, 80, 123, 1138, 1282
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 5 cut(s) 57, 80, 123, 1138, 1282
MwoI GCNNNNNNNGC 7 cut(s) 43, 52, 179, 510, 1114, 1204, 1277
NcoI CCATGG 1 cut(s) 1336
NdeII GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
NlaIII CATG 7 cut(s) 204, 332, 476, 499, 772, 903, 1340
NlaIV GGNNCC 2 cut(s) 863, 1286
NmuCI GTSAC 2 cut(s) 163, 952
NsiI ATGCAT 1 cut(s) 175
NspV TTCGAA 1 cut(s) 315
OliI CACNNNNGTG 1 cut(s) 123
PagI TCATGA 1 cut(s) 472
PctI GAATGC 1 cut(s) 173
PdmI GAANNNNTTC 1 cut(s) 989
PfeI GAWTC 1 cut(s) 529
PkrI GCNGC 2 cut(s) 1051, 1270
PleI GAGTC 2 cut(s) 574, 1249
PpsI GAGTC 2 cut(s) 574, 1249
Ppu21I YACGTR 1 cut(s) 27
PpuMI RGGWCCY 2 cut(s) 1183, 1285
Psp5II RGGWCCY 2 cut(s) 1183, 1285
Psp6I CCWGG 5 cut(s) 55, 78, 121, 1136, 1280
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 5 cut(s) 55, 78, 121, 1136, 1280
PspN4I GGNNCC 2 cut(s) 863, 1286
PspPI GGNCC 5 cut(s) 108, 412, 1013, 1183, 1285
PspPPI RGGWCCY 2 cut(s) 1183, 1285
PstI CTGCAG 1 cut(s) 1278
PstNI CAGNNNCTG 2 cut(s) 211, 532
PsuI RGATCY 2 cut(s) 69, 861
PvuII CAGCTG 1 cut(s) 1156
RsaI GTAC 3 cut(s) 20, 209, 341
RsaNI GTAC 3 cut(s) 19, 208, 340
RseI CAYNNNNRTG 1 cut(s) 123
SaqAI TTAA 4 cut(s) 672, 734, 786, 1179
SatI GCNGC 2 cut(s) 1050, 1269
Sau3AI GATC 8 cut(s) 69, 351, 492, 555, 622, 628, 715, 861
Sau96I GGNCC 5 cut(s) 108, 412, 1013, 1183, 1285
SbfI CCTGCAGG 1 cut(s) 1278
SchI GAGTC 2 cut(s) 574, 1249
ScrFI CCNGG 5 cut(s) 57, 80, 123, 1138, 1282
SdaI CCTGCAGG 1 cut(s) 1278
SduI GDGCHC 2 cut(s) 48, 1125
SfaNI GCATC 2 cut(s) 160, 466
SfcI CTRYAG 2 cut(s) 274, 1274
SfuI TTCGAA 1 cut(s) 315
SinI GGWCC 4 cut(s) 412, 1013, 1183, 1285
SmiMI CAYNNNNRTG 1 cut(s) 123
SmlI CTYRAG 2 cut(s) 820, 1118
SmoI CTYRAG 2 cut(s) 820, 1118
Sse8387I CCTGCAGG 1 cut(s) 1278
Sse9I AATT 9 cut(s) 135, 145, 218, 541, 665, 673, 974, 1109, 1201
SsiI CCGC 1 cut(s) 836
SspMI CTAG 3 cut(s) 192, 726, 1080
StyD4I CCNGG 5 cut(s) 55, 78, 121, 1136, 1280
StyI CCWWGG 3 cut(s) 111, 267, 1336
TaaI ACNGT 3 cut(s) 698, 952, 1177
TaiI ACGT 1 cut(s) 29
TaqI TCGA 1 cut(s) 315
TasI AATT 9 cut(s) 135, 145, 218, 541, 665, 673, 974, 1109, 1201
TatI WGTACW 2 cut(s) 18, 339
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 4 cut(s) 672, 734, 786, 1179
Tru9I TTAA 4 cut(s) 672, 734, 786, 1179
TscAI CASTG 5 cut(s) 172, 202, 232, 660, 957
TseFI GTSAC 2 cut(s) 163, 952
TseI GCWGC 2 cut(s) 1049, 1268
Tsp45I GTSAC 2 cut(s) 163, 952
TspDTI ATGAA 3 cut(s) 166, 784, 888
TspRI CASTG 5 cut(s) 172, 202, 232, 660, 957
VpaK11BI GGWCC 4 cut(s) 412, 1013, 1183, 1285
XapI RAATTY 1 cut(s) 665
XcmI CCANNNNNNNNNTGG 2 cut(s) 63, 422
XmnI GAANNNNTTC 1 cut(s) 989
XspI CTAG 3 cut(s) 192, 726, 1080
Zsp2I ATGCAT 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.