Prupe.2G254300_v2.0.a1

Proline-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0004472
Physical Location & Seq
Reverse (-)
26722911 .. 26723961
1051 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G254300.1

Sequence Viewer

Length: 294 bp
ATGTTCGGCGGCGGTGGTTCCCACACAGACCTTAAAGGCTACTTCTATGCTCAGCTTGAAGGCTTCAAAATGGCGCATTCTATATTGGACCATCCACTCCATGGGTGCCATGTGAAGCTAGTTTCTTCTCCTCTTGCCAATTGCAGTGACCTCAGTAATGTCAATAACGGTCTCTATGGTGCCCCTCTTCGTTCCGAAAACAAGAGATTGTTGGGTAGGAATTATGAGGCAGTTATATATGCTGCAGGGCCTTTGGCTTTCCGTCCTTCTCATTGCTCCAATACTCACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

98

Amino Acids

10.49

Weight (kDa)

8.53

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 105, 179
AccB7I CCANNNNNTGG 1 cut(s) 101
AciI CCGC 2 cut(s) 9, 12
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 2 cut(s) 59, 67
AluBI AGCT 2 cut(s) 55, 118
AluI AGCT 2 cut(s) 55, 118
Alw26I GTCTC 1 cut(s) 176
AoxI GGCC 1 cut(s) 248
ApeKI GCWGC 1 cut(s) 242
AspLEI GCGC 1 cut(s) 76
AspS9I GGNCC 2 cut(s) 88, 248
AvaII GGWCC 1 cut(s) 88
BaeGI GKGCMC 1 cut(s) 184
BanI GGYRCC 2 cut(s) 105, 179
BbvI GCAGC 1 cut(s) 229
BccI CCATC 1 cut(s) 99
BcoDI GTCTC 1 cut(s) 176
BfaI CTAG 1 cut(s) 119
BfmI CTRYAG 1 cut(s) 243
BisI GCNGC 2 cut(s) 10, 243
BlpI GCTNAGC 1 cut(s) 51
BlsI GCNGC 2 cut(s) 11, 244
Bme18I GGWCC 1 cut(s) 88
BmgT120I GGNCC 2 cut(s) 88, 248
BmiI GGNNCC 3 cut(s) 19, 107, 181
Bpu1102I GCTNAGC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 176
BsaJI CCNNGG 1 cut(s) 100
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse3DI GCAATG 1 cut(s) 271
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 1 cut(s) 91
BseLI CCNNNNNNNGG 1 cut(s) 101
BseMI GCAATG 1 cut(s) 271
BseMII CTCAG 2 cut(s) 65, 166
BseRI GAGGAG 1 cut(s) 120
BseSI GKGCMC 1 cut(s) 184
BseXI GCAGC 1 cut(s) 229
BshFI GGCC 1 cut(s) 250
BshNI GGYRCC 2 cut(s) 105, 179
BslI CCNNNNNNNGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 76
BsnI GGCC 1 cut(s) 250
Bso31I GGTCTC 1 cut(s) 176
Bsp1286I GDGCHC 1 cut(s) 184
Bsp1720I GCTNAGC 1 cut(s) 51
Bsp19I CCATGG 1 cut(s) 100
BspACI CCGC 2 cut(s) 9, 12
BspANI GGCC 1 cut(s) 250
BspCNI CTCAG 2 cut(s) 64, 165
BspLI GGNNCC 3 cut(s) 19, 107, 181
BspMAI CTGCAG 1 cut(s) 247
BspT107I GGYRCC 2 cut(s) 105, 179
BspTNI GGTCTC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 271
BssECI CCNNGG 1 cut(s) 100
BssT1I CCWWGG 1 cut(s) 100
Bst4CI ACNGT 1 cut(s) 170
Bst6I CTCTTC 1 cut(s) 192
BstDEI CTNAG 2 cut(s) 51, 152
BstDSI CCRYGG 1 cut(s) 100
BstF5I GGATG 1 cut(s) 91
BstHHI GCGC 1 cut(s) 76
BstMAI GTCTC 1 cut(s) 176
BstSFI CTRYAG 1 cut(s) 243
BstSLI GKGCMC 1 cut(s) 184
BstV1I GCAGC 1 cut(s) 229
BsuRI GGCC 1 cut(s) 250
BtgI CCRYGG 1 cut(s) 100
BtsCI GGATG 1 cut(s) 91
BtsI GCAGTG 1 cut(s) 151
BtsIMutI CAGTG 1 cut(s) 151
CfoI GCGC 1 cut(s) 76
Cfr13I GGNCC 2 cut(s) 88, 248
CviAII CATG 2 cut(s) 101, 110
CviJI RGCY 6 cut(s) 39, 55, 63, 118, 250, 257
CviKI_1 RGCY 6 cut(s) 39, 55, 63, 118, 250, 257
DdeI CTNAG 2 cut(s) 51, 152
Eam1104I CTCTTC 1 cut(s) 192
EarI CTCTTC 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 100
Eco31I GGTCTC 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 248
EcoT14I CCWWGG 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 100
FaeI CATG 2 cut(s) 104, 113
FaiI YATR 9 cut(s) 48, 83, 102, 111, 177, 225, 236, 238, 240
FatI CATG 2 cut(s) 100, 109
Fnu4HI GCNGC 2 cut(s) 10, 243
FokI GGATG 1 cut(s) 78
Fsp4HI GCNGC 2 cut(s) 10, 243
FspBI CTAG 1 cut(s) 119
GlaI GCGC 1 cut(s) 75
GluI GCNGC 2 cut(s) 10, 243
HaeIII GGCC 1 cut(s) 250
HhaI GCGC 1 cut(s) 76
Hin1II CATG 2 cut(s) 104, 113
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
Hpy188I TCNGA 1 cut(s) 196
Hpy188III TCNNGA 1 cut(s) 291
HpyAV CCTTC 2 cut(s) 53, 276
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4V TGCA 2 cut(s) 144, 245
HpyF3I CTNAG 2 cut(s) 51, 152
Hsp92II CATG 2 cut(s) 104, 113
HspAI GCGC 1 cut(s) 74
LmnI GCTCC 1 cut(s) 281
LpnPI CCDG 1 cut(s) 231
Lsp1109I GCAGC 1 cut(s) 229
MaeI CTAG 1 cut(s) 119
MaeIII GTNAC 1 cut(s) 146
MboII GAAGA 2 cut(s) 117, 179
MfeI CAATTG 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 184
MluCI AATT 2 cut(s) 139, 220
MnlI CCTC 4 cut(s) 141, 161, 195, 220
MseI TTAA 1 cut(s) 33
MunI CAATTG 1 cut(s) 139
Mva1269I GAATGC 1 cut(s) 76
NcoI CCATGG 1 cut(s) 100
NlaIII CATG 2 cut(s) 104, 113
NlaIV GGNNCC 3 cut(s) 19, 107, 181
NmuCI GTSAC 1 cut(s) 146
PctI GAATGC 1 cut(s) 76
PflMI CCANNNNNTGG 1 cut(s) 101
PkrI GCNGC 2 cut(s) 11, 244
PspN4I GGNNCC 3 cut(s) 19, 107, 181
PspPI GGNCC 2 cut(s) 88, 248
PstI CTGCAG 1 cut(s) 247
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 2 cut(s) 10, 243
Sau96I GGNCC 2 cut(s) 88, 248
SduI GDGCHC 1 cut(s) 184
SetI ASST 4 cut(s) 33, 57, 120, 153
SfcI CTRYAG 1 cut(s) 243
SgeI CNNG 7 cut(s) 68, 113, 122, 131, 146, 214, 258
SinI GGWCC 1 cut(s) 88
Sse9I AATT 2 cut(s) 139, 220
SsiI CCGC 2 cut(s) 9, 12
SspMI CTAG 1 cut(s) 119
StyI CCWWGG 1 cut(s) 100
TaaI ACNGT 1 cut(s) 170
TasI AATT 2 cut(s) 139, 220
TauI GCSGC 1 cut(s) 12
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 1 cut(s) 151
TseFI GTSAC 1 cut(s) 146
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 146
TspGWI ACGGA 1 cut(s) 251
TspRI CASTG 1 cut(s) 151
Van91I CCANNNNNTGG 1 cut(s) 101
VpaK11BI GGWCC 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 98
XspI CTAG 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.