Rorug01G0359900

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
47564710 .. 47567681
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0359900.1

Sequence Viewer

Length: 840 bp
ATGAGAAATACTGATTTTCAGATGACAAATTGGGATACTCAAATGAACATGAATAGAAAGATTGGCTTTTGCATGGGGTCCAAAGCAATAGAAAGTGACAACCATAACAGTGTTTCTGGAGACATTTCTGATGTTCCTCTTGATCAGTCATCACTCTTTACCTATCAGACAGTAACAGCAGGTTATTCCAATGGGGAATTCAGATATGATCATGGCATTTTTCAGCAGCCAATGTTGTTTGACAAGAGTATTAATTCAGCTACCCAATTTCAAGAAGATTTTCAGGTCATACAGAATGCAAGGAAGCGCCCAATAATTGAGGTCAATGATATCTTGCCCAAAAATGACCTTGGTGGTTCAATTGGTGAGAGAACAATTTCAAATGAATGGAACCAAAACAAGAGAAACAAGGGGACAAATTCTCAACAACAATGGCATAATCAACTCCAAGAAGCATCTATGGAAAAACAAGACAATAGGAAGTTGCAAGTTCCTGTGAGGCGAAGCCAAAAGCTTAGTGACAAAATCACTGCTCTTCAAAAATTGGTTTCCCCCTATGGCAAGACTGACACTGCCTCAGTTCTTCAAGAGGCTTCGATTTACATCGTGCTTCTTCAACAACAAATTCAGAATCTGCATCGGATCTTTAGTAATTCATACAAGAATGCTGCAGGACTTCACACACAAGAATCTGGGAGTAGTAGCCAAGTGCTTGACCTCAGAAGCAAAGGCCTTTGTTTGGTTCCTATTTCCATGACTCAGAAAGTGACTATGGAAGAGGGTTTTGATGAGGATCATCTTTCTACATCAAGAAAATTTGTCATAGCTAACCATTTCTAG

Protein Analysis

279

Amino Acids

31.76

Weight (kDa)

7.06

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 170
AclWI GGATC 2 cut(s) 650, 801
AcsI RAATTY 4 cut(s) 197, 418, 624, 815
AfiI CCNNNNNNNGG 1 cut(s) 739
AgsI TTSAA 6 cut(s) 272, 360, 381, 539, 587, 617
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AluBI AGCT 3 cut(s) 260, 514, 827
AluI AGCT 3 cut(s) 260, 514, 827
Alw26I GTCTC 1 cut(s) 114
AlwI GGATC 2 cut(s) 650, 801
AlwNI CAGNNNCTG 1 cut(s) 634
AoxI GGCC 1 cut(s) 730
ApeKI GCWGC 2 cut(s) 226, 668
ApoI RAATTY 4 cut(s) 197, 418, 624, 815
AseI ATTAAT 1 cut(s) 252
Asp700I GAANNNNTTC 2 cut(s) 279, 376
AspLEI GCGC 1 cut(s) 309
AspS9I GGNCC 1 cut(s) 78
AsuHPI GGTGA 1 cut(s) 377
AvaII GGWCC 1 cut(s) 78
BbvI GCAGC 2 cut(s) 238, 655
BciVI GTATCC 1 cut(s) 28
BclI TGATCA 2 cut(s) 142, 208
BcoDI GTCTC 1 cut(s) 114
BfaI CTAG 1 cut(s) 838
BfmI CTRYAG 1 cut(s) 669
BfoI RGCGCY 1 cut(s) 310
BfuAI ACCTGC 1 cut(s) 170
BfuI GTATCC 1 cut(s) 28
BisI GCNGC 2 cut(s) 227, 669
BlsI GCNGC 2 cut(s) 228, 670
Bme18I GGWCC 1 cut(s) 78
BmgT120I GGNCC 1 cut(s) 78
BmiI GGNNCC 3 cut(s) 79, 392, 744
BmsI GCATC 2 cut(s) 464, 646
BpmI CTGGAG 1 cut(s) 138
BsaBI GATNNNNATC 2 cut(s) 602, 792
BsaJI CCNNGG 1 cut(s) 349
Bsc4I CCNNNNNNNGG 1 cut(s) 739
Bse8I GATNNNNATC 2 cut(s) 602, 792
BseDI CCNNGG 1 cut(s) 349
BseJI GATNNNNATC 2 cut(s) 602, 792
BseLI CCNNNNNNNGG 1 cut(s) 739
BseMII CTCAG 3 cut(s) 591, 733, 773
BseXI GCAGC 2 cut(s) 238, 655
BshFI GGCC 1 cut(s) 732
BslFI GGGAC 1 cut(s) 427
BslI CCNNNNNNNGG 1 cut(s) 739
BsmAI GTCTC 1 cut(s) 114
BsmFI GGGAC 1 cut(s) 427
BsmI GAATGC 2 cut(s) 301, 670
BsnI GGCC 1 cut(s) 732
Bsp143I GATC 4 cut(s) 142, 208, 642, 793
BspANI GGCC 1 cut(s) 732
BspCNI CTCAG 3 cut(s) 590, 732, 772
BspLI GGNNCC 3 cut(s) 79, 392, 744
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 1 cut(s) 170
BspPI GGATC 2 cut(s) 650, 801
BspQI GCTCTTC 1 cut(s) 540
BssECI CCNNGG 1 cut(s) 349
BssMI GATC 4 cut(s) 142, 208, 642, 793
BssT1I CCWWGG 1 cut(s) 349
Bst4CI ACNGT 2 cut(s) 110, 172
Bst6I CTCTTC 2 cut(s) 540, 771
BstDEI CTNAG 4 cut(s) 515, 577, 719, 759
BstH2I RGCGCY 1 cut(s) 310
BstHHI GCGC 1 cut(s) 309
BstKTI GATC 4 cut(s) 145, 211, 645, 796
BstMAI GTCTC 1 cut(s) 114
BstMBI GATC 4 cut(s) 142, 208, 642, 793
BstSFI CTRYAG 1 cut(s) 669
BstV1I GCAGC 2 cut(s) 238, 655
BstX2I RGATCY 1 cut(s) 642
BstYI RGATCY 1 cut(s) 642
BsuI GTATCC 1 cut(s) 28
BsuRI GGCC 1 cut(s) 732
BtsI GCAGTG 2 cut(s) 528, 570
BtsIMutI CAGTG 3 cut(s) 115, 528, 570
BveI ACCTGC 1 cut(s) 170
CaiI CAGNNNCTG 1 cut(s) 634
CfoI GCGC 1 cut(s) 309
Cfr13I GGNCC 1 cut(s) 78
CviAII CATG 4 cut(s) 49, 73, 212, 754
CviJI RGCY 9 cut(s) 66, 229, 260, 507, 514, 593, 705, 732, 827
CviKI_1 RGCY 9 cut(s) 66, 229, 260, 507, 514, 593, 705, 732, 827
DdeI CTNAG 4 cut(s) 515, 577, 719, 759
DpnI GATC 4 cut(s) 144, 210, 644, 795
DpnII GATC 4 cut(s) 142, 208, 642, 793
Eam1104I CTCTTC 2 cut(s) 540, 771
EarI CTCTTC 2 cut(s) 540, 771
Eco130I CCWWGG 1 cut(s) 349
Eco147I AGGCCT 1 cut(s) 732
Eco32I GATATC 1 cut(s) 331
Eco47I GGWCC 1 cut(s) 78
EcoRI GAATTC 1 cut(s) 197
EcoRV GATATC 1 cut(s) 331
EcoT14I CCWWGG 1 cut(s) 349
ErhI CCWWGG 1 cut(s) 349
FaeI CATG 4 cut(s) 52, 76, 215, 757
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FaqI GGGAC 1 cut(s) 427
FatI CATG 4 cut(s) 48, 72, 211, 753
FbaI TGATCA 2 cut(s) 142, 208
Fnu4HI GCNGC 2 cut(s) 227, 669
Fsp4HI GCNGC 2 cut(s) 227, 669
FspBI CTAG 1 cut(s) 838
GlaI GCGC 1 cut(s) 308
GluI GCNGC 2 cut(s) 227, 669
GsuI CTGGAG 1 cut(s) 138
HaeII RGCGCY 1 cut(s) 310
HaeIII GGCC 1 cut(s) 732
HhaI GCGC 1 cut(s) 309
Hin1II CATG 4 cut(s) 52, 76, 215, 757
Hin6I GCGC 1 cut(s) 307
HinP1I GCGC 1 cut(s) 307
HindIII AAGCTT 1 cut(s) 512
HinfI GANTC 3 cut(s) 631, 689, 757
HphI GGTGA 1 cut(s) 377
Hpy188I TCNGA 8 cut(s) 21, 130, 168, 203, 630, 642, 722, 762
Hpy188III TCNNGA 5 cut(s) 117, 140, 272, 587, 810
HpyCH4III ACNGT 2 cut(s) 110, 172
HpyCH4V TGCA 5 cut(s) 72, 299, 487, 637, 671
HpyF3I CTNAG 4 cut(s) 515, 577, 719, 759
Hsp92II CATG 4 cut(s) 52, 76, 215, 757
HspAI GCGC 1 cut(s) 307
Ksp22I TGATCA 2 cut(s) 142, 208
Kzo9I GATC 4 cut(s) 142, 208, 642, 793
LguI GCTCTTC 1 cut(s) 540
LpnPI CCDG 6 cut(s) 102, 165, 269, 507, 657, 678
Lsp1109I GCAGC 2 cut(s) 238, 655
LweI GCATC 2 cut(s) 464, 646
MaeI CTAG 1 cut(s) 838
MaeIII GTNAC 4 cut(s) 95, 172, 518, 766
MalI GATC 4 cut(s) 144, 210, 644, 795
MboI GATC 4 cut(s) 142, 208, 642, 793
MboII GAAGA 5 cut(s) 287, 527, 575, 605, 788
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 1 cut(s) 642
MlyI GAGTC 1 cut(s) 751
MnlI CCTC 8 cut(s) 147, 313, 492, 583, 586, 728, 772, 784
MroXI GAANNNNTTC 2 cut(s) 279, 376
MseI TTAA 1 cut(s) 252
MslI CAYNNNNRTG 1 cut(s) 108
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 2 cut(s) 301, 670
NdeII GATC 4 cut(s) 142, 208, 642, 793
NlaIII CATG 4 cut(s) 52, 76, 215, 757
NlaIV GGNNCC 3 cut(s) 79, 392, 744
NmuCI GTSAC 3 cut(s) 95, 518, 766
PceI AGGCCT 1 cut(s) 732
PciSI GCTCTTC 1 cut(s) 540
PctI GAATGC 2 cut(s) 301, 670
PdmI GAANNNNTTC 2 cut(s) 279, 376
PfeI GAWTC 2 cut(s) 631, 689
PkrI GCNGC 2 cut(s) 228, 670
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
PshBI ATTAAT 1 cut(s) 252
PspN4I GGNNCC 3 cut(s) 79, 392, 744
PspPI GGNCC 1 cut(s) 78
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 1 cut(s) 634
PsuI RGATCY 1 cut(s) 642
RseI CAYNNNNRTG 1 cut(s) 108
SapI GCTCTTC 1 cut(s) 540
SaqAI TTAA 1 cut(s) 252
SatI GCNGC 2 cut(s) 227, 669
Sau3AI GATC 4 cut(s) 142, 208, 642, 793
Sau96I GGNCC 1 cut(s) 78
SchI GAGTC 1 cut(s) 751
SetI ASST 9 cut(s) 164, 184, 262, 288, 324, 351, 516, 720, 829
SfaNI GCATC 2 cut(s) 464, 646
SfcI CTRYAG 1 cut(s) 669
SinI GGWCC 1 cut(s) 78
SmiMI CAYNNNNRTG 1 cut(s) 108
SseBI AGGCCT 1 cut(s) 732
SspMI CTAG 1 cut(s) 838
StuI AGGCCT 1 cut(s) 732
StyI CCWWGG 1 cut(s) 349
TaaI ACNGT 2 cut(s) 110, 172
TaqI TCGA 1 cut(s) 596
TfiI GAWTC 2 cut(s) 631, 689
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TscAI CASTG 3 cut(s) 115, 535, 577
TseFI GTSAC 3 cut(s) 95, 518, 766
TseI GCWGC 2 cut(s) 226, 668
Tsp45I GTSAC 3 cut(s) 95, 518, 766
TspDTI ATGAA 4 cut(s) 59, 65, 399, 645
TspRI CASTG 3 cut(s) 115, 535, 577
VpaK11BI GGWCC 1 cut(s) 78
VspI ATTAAT 1 cut(s) 252
XapI RAATTY 4 cut(s) 197, 418, 624, 815
XmnI GAANNNNTTC 2 cut(s) 279, 376
XspI CTAG 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.