Prupe.2G307400_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
29210899 .. 29212967
2069 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G307400.1

Sequence Viewer

Length: 1050 bp
ATGGAGAACTGCAATATGCATGGTGGGGAGAAAATGAGTCTTATAAATGAGCTAGCACAAGGCAGGGAGCTAGCTAGGCAACTCCAGATCTATCTCAATTTTCCGTCTTCCTCTCATGGAACCCGGGAATCGTTGGTTCAAAAAATCATAGTTTCATACGAAAAGGCGCTTTCCATGCTCAATTCTAGCAGCTCAGCCTCAGGGGGAGAGCAACAACTGCCCACAGGTCATGCTGCGATTCGAATGATTGAGTCCCCCCCACCTTCTCTCAATGGAAGTCCCCTGAGTGAAGACTCGGATCGCGAATTCAAGGACCAGGACAACAAAGATTCCTCTAGGAAGAGGAAAACTCTGCCGAGGTGGACACAACAAATAAGAGTTACATCAGGTATAGGGCTTGAGGGGCCTCTTGATGATGGCTTCAGCTGGAGGAAATATGGCCAAAAGGACATACTTGGAGCCAAATATCCAAGAGGCTATTACAGATGCACTCATCGGAATGCTCAATGCTGTTTGGCTACAAAGCAAGTGCAACGCTCCGATGAGGACCCAACAGTCTTCGAAATTACTTACAGAGGAAGGCACACATGTACGCAAGCCTCCACCAGCACAACCAGTGCTCCTCCTCCCCCTCCTCCTCCTCCTCCACAGAATAGCATGGACATAGTGGACCCTCAACAAAATCAGCAGCAACCACAAGACTTGCTCTTAGCCATCCCACAAGGCCTTACAGTAGTAACTGAAGGCTTAGACGCTGGTGATCAGGAATTGTTTCCCTACAATCCATTGAACCACAACTATGCGGGGCATTTTTCTCCTCAATTTATGGGCCCTGCAACTTCTGGAACACAGTATTTCTCAGCTTCAGAGCAGGGCTTTGGAGGAGGCAGCCAAAGTTTCCAGGGTGCTGAGTGTGAGATTGCAGAGATTCTGTCATCTTCTACTTCAGCAACCAACTCTCCTGCTGCTTTGGGTTTCCCATTTGGTCAGGCTGATCAAAACTTATACCCCAACTTCTCATTTGACGGTCCAGGCTTCTTTTCCTCATAG

Protein Analysis

350

Amino Acids

38.1

Weight (kDa)

5.3

Isoelectric Point (pI)

58.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 44
AasI GACNNNNNNGTC 1 cut(s) 554
AccII CGCG 1 cut(s) 303
AciI CCGC 1 cut(s) 803
AclWI GGATC 1 cut(s) 306
AcoI YGGCCR 1 cut(s) 439
AcsI RAATTY 1 cut(s) 305
AcuI CTGAAG 4 cut(s) 406, 762, 849, 930
AfaI GTAC 1 cut(s) 592
AflIII ACRYGT 1 cut(s) 587
AgsI TTSAA 3 cut(s) 140, 310, 790
AjnI CCWGG 3 cut(s) 315, 900, 1030
AluBI AGCT 6 cut(s) 52, 70, 74, 192, 426, 863
AluI AGCT 6 cut(s) 52, 70, 74, 192, 426, 863
Alw21I GWGCWC 1 cut(s) 622
AlwI GGATC 1 cut(s) 306
Ama87I CYCGRG 1 cut(s) 123
AoxI GGCC 4 cut(s) 404, 439, 724, 829
ApaI GGGCCC 1 cut(s) 833
ApeKI GCWGC 5 cut(s) 189, 233, 688, 888, 965
ApoI RAATTY 1 cut(s) 305
Asp700I GAANNNNTTC 1 cut(s) 771
AspLEI GCGC 1 cut(s) 169
AspS9I GGNCC 7 cut(s) 313, 404, 547, 670, 829, 830, 1028
AsuC2I CCSGG 2 cut(s) 124, 125
AsuHPI GGTGA 1 cut(s) 770
AsuII TTCGAA 2 cut(s) 241, 561
AsuNHI GCTAGC 2 cut(s) 52, 70
AvaI CYCGRG 1 cut(s) 123
AvaII GGWCC 4 cut(s) 313, 547, 670, 1028
AxyI CCTNAGG 1 cut(s) 199
BaeGI GKGCMC 1 cut(s) 833
BalI TGGCCA 1 cut(s) 441
BanII GRGCYC 1 cut(s) 833
BbsI GAAGAC 3 cut(s) 99, 297, 550
Bbv12I GWGCWC 1 cut(s) 622
BbvI GCAGC 5 cut(s) 201, 220, 700, 900, 952
BccI CCATC 2 cut(s) 410, 722
BciT130I CCWGG 3 cut(s) 317, 902, 1032
BclI TGATCA 2 cut(s) 760, 994
BcnI CCSGG 2 cut(s) 124, 125
BfaI CTAG 5 cut(s) 53, 71, 75, 186, 336
BfoI RGCGCY 1 cut(s) 170
BglII AGATCT 1 cut(s) 87
BisI GCNGC 5 cut(s) 190, 234, 689, 889, 966
BlpI GCTNAGC 1 cut(s) 193
BlsI GCNGC 5 cut(s) 191, 235, 690, 890, 967
Bme1390I CCNGG 5 cut(s) 124, 125, 317, 902, 1032
Bme18I GGWCC 4 cut(s) 313, 547, 670, 1028
BmeT110I CYCGRG 1 cut(s) 123
BmgT120I GGNCC 7 cut(s) 313, 404, 547, 670, 829, 830, 1028
BmiI GGNNCC 6 cut(s) 121, 405, 460, 549, 672, 831
BmrFI CCNGG 5 cut(s) 124, 125, 317, 902, 1032
BmsI GCATC 1 cut(s) 476
BmtI GCTAGC 2 cut(s) 56, 74
BpiI GAAGAC 3 cut(s) 99, 297, 550
BplI GAGNNNNNCTC 2 cut(s) 334, 366
BpmI CTGGAG 2 cut(s) 68, 448
Bpu1102I GCTNAGC 1 cut(s) 193
Bpu14I TTCGAA 2 cut(s) 241, 561
BpuEI CTTGAG 1 cut(s) 419
BpuMI CCSGG 2 cut(s) 124, 125
BsaJI CCNNGG 3 cut(s) 123, 356, 901
BsaXI ACNNNNNCTCC 4 cut(s) 604, 634, 943, 973
Bse1I ACTGG 1 cut(s) 615
Bse21I CCTNAGG 1 cut(s) 199
BseBI CCWGG 3 cut(s) 317, 902, 1032
BseDI CCNNGG 3 cut(s) 123, 356, 901
BseGI GGATG 1 cut(s) 714
BseMII CTCAG 5 cut(s) 207, 213, 275, 873, 900
BseNI ACTGG 1 cut(s) 615
BseRI GAGGAG 8 cut(s) 612, 615, 624, 627, 630, 633, 807, 897
BseSI GKGCMC 1 cut(s) 833
BseXI GCAGC 5 cut(s) 201, 220, 700, 900, 952
Bsh1236I CGCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 406, 441, 726, 831
BsiHKAI GWGCWC 1 cut(s) 622
BsiHKCI CYCGRG 1 cut(s) 123
BsiSI CCGG 1 cut(s) 124
BslFI GGGAC 2 cut(s) 238, 264
BsmFI GGGAC 2 cut(s) 238, 264
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 4 cut(s) 406, 441, 726, 831
BsoBI CYCGRG 1 cut(s) 123
Bsp119I TTCGAA 2 cut(s) 241, 561
Bsp120I GGGCCC 1 cut(s) 829
Bsp1286I GDGCHC 2 cut(s) 622, 833
Bsp143I GATC 4 cut(s) 87, 298, 760, 994
Bsp1720I GCTNAGC 1 cut(s) 193
Bsp68I TCGCGA 1 cut(s) 303
BspACI CCGC 1 cut(s) 803
BspANI GGCC 4 cut(s) 406, 441, 726, 831
BspCNI CTCAG 5 cut(s) 206, 212, 276, 872, 901
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 6 cut(s) 121, 405, 460, 549, 672, 831
BspOI GCTAGC 2 cut(s) 56, 74
BspPI GGATC 1 cut(s) 306
BspT104I TTCGAA 2 cut(s) 241, 561
BsrI ACTGG 1 cut(s) 615
BssECI CCNNGG 3 cut(s) 123, 356, 901
BssMI GATC 4 cut(s) 87, 298, 760, 994
Bst2UI CCWGG 3 cut(s) 317, 902, 1032
Bst4CI ACNGT 4 cut(s) 556, 733, 852, 1028
Bst6I CTCTTC 1 cut(s) 335
BstAPI GCANNNNNTGC 1 cut(s) 217
BstBI TTCGAA 2 cut(s) 241, 561
BstC8I GCNNGC 3 cut(s) 54, 72, 597
BstDEI CTNAG 7 cut(s) 193, 199, 284, 709, 748, 859, 909
BstF5I GGATG 1 cut(s) 714
BstFNI CGCG 1 cut(s) 303
BstH2I RGCGCY 1 cut(s) 170
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 4 cut(s) 90, 301, 763, 997
BstMBI GATC 4 cut(s) 87, 298, 760, 994
BstMWI GCNNNNNNNGC 4 cut(s) 76, 175, 217, 403
BstNI CCWGG 3 cut(s) 317, 902, 1032
BstNSI RCATGY 1 cut(s) 591
BstSCI CCNGG 5 cut(s) 122, 123, 315, 900, 1030
BstSLI GKGCMC 1 cut(s) 833
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 5 cut(s) 201, 220, 700, 900, 952
BstV2I GAAGAC 3 cut(s) 99, 297, 550
BstX2I RGATCY 1 cut(s) 87
BstYI RGATCY 1 cut(s) 87
Bsu36I CCTNAGG 1 cut(s) 199
BsuRI GGCC 4 cut(s) 406, 441, 726, 831
BtsCI GGATG 1 cut(s) 714
BtsIMutI CAGTG 1 cut(s) 622
BtuMI TCGCGA 1 cut(s) 303
Cac8I GCNNGC 3 cut(s) 54, 72, 597
CfoI GCGC 1 cut(s) 169
Cfr13I GGNCC 7 cut(s) 313, 404, 547, 670, 829, 830, 1028
Cfr9I CCCGGG 1 cut(s) 123
CseI GACGC 1 cut(s) 761
Csp6I GTAC 1 cut(s) 591
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviAII CATG 6 cut(s) 20, 116, 175, 230, 588, 658
CviQI GTAC 1 cut(s) 591
DdeI CTNAG 7 cut(s) 193, 199, 284, 709, 748, 859, 909
DpnI GATC 4 cut(s) 89, 300, 762, 996
DpnII GATC 4 cut(s) 87, 298, 760, 994
DrdI GACNNNNNNGTC 1 cut(s) 554
DseDI GACNNNNNNGTC 1 cut(s) 554
EaeI YGGCCR 1 cut(s) 439
Eam1104I CTCTTC 1 cut(s) 335
EarI CTCTTC 1 cut(s) 335
Eco147I AGGCCT 1 cut(s) 726
Eco24I GRGCYC 1 cut(s) 833
Eco47I GGWCC 4 cut(s) 313, 547, 670, 1028
Eco57I CTGAAG 4 cut(s) 406, 762, 849, 930
Eco81I CCTNAGG 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 123
EcoO109I RGGNCCY 3 cut(s) 404, 547, 830
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 3 cut(s) 315, 900, 1030
EcoT22I ATGCAT 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 833
FaeI CATG 6 cut(s) 23, 119, 178, 233, 591, 661
FaqI GGGAC 2 cut(s) 238, 264
FatI CATG 6 cut(s) 19, 115, 174, 229, 587, 657
FauI CCCGC 1 cut(s) 796
FbaI TGATCA 2 cut(s) 760, 994
Fnu4HI GCNGC 5 cut(s) 190, 234, 689, 889, 966
FokI GGATG 1 cut(s) 701
FriOI GRGCYC 1 cut(s) 833
Fsp4HI GCNGC 5 cut(s) 190, 234, 689, 889, 966
FspBI CTAG 5 cut(s) 53, 71, 75, 186, 336
GlaI GCGC 1 cut(s) 168
GluI GCNGC 5 cut(s) 190, 234, 689, 889, 966
GsuI CTGGAG 2 cut(s) 68, 448
HaeII RGCGCY 1 cut(s) 170
HaeIII GGCC 4 cut(s) 406, 441, 726, 831
HapII CCGG 1 cut(s) 124
HgaI GACGC 1 cut(s) 761
HhaI GCGC 1 cut(s) 169
Hin1II CATG 6 cut(s) 23, 119, 178, 233, 591, 661
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HinfI GANTC 7 cut(s) 37, 128, 238, 251, 293, 329, 928
HpaII CCGG 1 cut(s) 124
HphI GGTGA 1 cut(s) 770
Hpy166II GTNNAC 2 cut(s) 363, 670
Hpy188I TCNGA 4 cut(s) 298, 498, 541, 868
Hpy188III TCNNGA 5 cut(s) 85, 302, 410, 764, 843
Hpy8I GTNNAC 2 cut(s) 363, 670
HpyAV CCTTC 3 cut(s) 273, 573, 737
HpyCH4III ACNGT 4 cut(s) 556, 733, 852, 1028
HpyCH4V TGCA 6 cut(s) 12, 19, 489, 532, 836, 923
HpyF10VI GCNNNNNNNGC 4 cut(s) 76, 175, 217, 403
HpyF3I CTNAG 7 cut(s) 193, 199, 284, 709, 748, 859, 909
Hsp92II CATG 6 cut(s) 23, 119, 178, 233, 591, 661
HspAI GCGC 1 cut(s) 167
Ksp22I TGATCA 2 cut(s) 760, 994
Kzo9I GATC 4 cut(s) 87, 298, 760, 994
LmnI GCTCC 4 cut(s) 67, 458, 542, 625
Lsp1109I GCAGC 5 cut(s) 201, 220, 700, 900, 952
LweI GCATC 1 cut(s) 476
MaeI CTAG 5 cut(s) 53, 71, 75, 186, 336
MaeIII GTNAC 2 cut(s) 379, 736
MalI GATC 4 cut(s) 89, 300, 762, 996
MboI GATC 4 cut(s) 87, 298, 760, 994
MboII GAAGA 5 cut(s) 99, 302, 352, 550, 930
MflI RGATCY 1 cut(s) 87
MhlI GDGCHC 2 cut(s) 622, 833
MlsI TGGCCA 1 cut(s) 441
MluCI AATT 6 cut(s) 97, 181, 305, 564, 767, 821
MluNI TGGCCA 1 cut(s) 441
MlyI GAGTC 3 cut(s) 46, 260, 287
Mox20I TGGCCA 1 cut(s) 441
Mph1103I ATGCAT 1 cut(s) 21
MroXI GAANNNNTTC 1 cut(s) 771
MscI TGGCCA 1 cut(s) 441
MslI CAYNNNNRTG 2 cut(s) 498, 798
Msp20I TGGCCA 1 cut(s) 441
MspA1I CMGCKG 1 cut(s) 426
MspI CCGG 1 cut(s) 124
MspR9I CCNGG 5 cut(s) 124, 125, 317, 902, 1032
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 3 cut(s) 317, 902, 1032
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 4 cut(s) 76, 175, 217, 403
NciI CCSGG 2 cut(s) 124, 125
NdeII GATC 4 cut(s) 87, 298, 760, 994
NheI GCTAGC 2 cut(s) 52, 70
NlaIII CATG 6 cut(s) 23, 119, 178, 233, 591, 661
NlaIV GGNNCC 6 cut(s) 121, 405, 460, 549, 672, 831
NmeAIII GCCGAG 1 cut(s) 381
NruI TCGCGA 1 cut(s) 303
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 1 cut(s) 591
NspV TTCGAA 2 cut(s) 241, 561
PceI AGGCCT 1 cut(s) 726
PciI ACATGT 1 cut(s) 587
PctI GAATGC 1 cut(s) 505
PdmI GAANNNNTTC 1 cut(s) 771
PfeI GAWTC 4 cut(s) 128, 238, 329, 928
PkrI GCNGC 5 cut(s) 191, 235, 690, 890, 967
PleI GAGTC 3 cut(s) 45, 259, 287
PpsI GAGTC 3 cut(s) 45, 259, 287
PpuMI RGGWCCY 1 cut(s) 547
PscI ACATGT 1 cut(s) 587
PsiI TTATAA 1 cut(s) 44
Psp5II RGGWCCY 1 cut(s) 547
Psp6I CCWGG 3 cut(s) 315, 900, 1030
PspGI CCWGG 3 cut(s) 315, 900, 1030
PspN4I GGNNCC 6 cut(s) 121, 405, 460, 549, 672, 831
PspOMI GGGCCC 1 cut(s) 829
PspPI GGNCC 7 cut(s) 313, 404, 547, 670, 829, 830, 1028
PspPPI RGGWCCY 1 cut(s) 547
PsuI RGATCY 1 cut(s) 87
PvuII CAGCTG 1 cut(s) 426
RruI TCGCGA 1 cut(s) 303
RsaI GTAC 1 cut(s) 592
RsaNI GTAC 1 cut(s) 591
RseI CAYNNNNRTG 2 cut(s) 498, 798
SatI GCNGC 5 cut(s) 190, 234, 689, 889, 966
Sau3AI GATC 4 cut(s) 87, 298, 760, 994
Sau96I GGNCC 7 cut(s) 313, 404, 547, 670, 829, 830, 1028
SchI GAGTC 3 cut(s) 46, 260, 287
ScrFI CCNGG 5 cut(s) 124, 125, 317, 902, 1032
SduI GDGCHC 2 cut(s) 622, 833
SfaNI GCATC 1 cut(s) 476
SfuI TTCGAA 2 cut(s) 241, 561
SinI GGWCC 4 cut(s) 313, 547, 670, 1028
SmaI CCCGGG 1 cut(s) 125
SmiMI CAYNNNNRTG 2 cut(s) 498, 798
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
Sse9I AATT 6 cut(s) 97, 181, 305, 564, 767, 821
SseBI AGGCCT 1 cut(s) 726
SsiI CCGC 1 cut(s) 803
SspMI CTAG 5 cut(s) 53, 71, 75, 186, 336
StuI AGGCCT 1 cut(s) 726
StyD4I CCNGG 5 cut(s) 122, 123, 315, 900, 1030
TaaI ACNGT 4 cut(s) 556, 733, 852, 1028
TaqI TCGA 2 cut(s) 241, 561
TasI AATT 6 cut(s) 97, 181, 305, 564, 767, 821
TfiI GAWTC 4 cut(s) 128, 238, 329, 928
TscAI CASTG 1 cut(s) 622
TseI GCWGC 5 cut(s) 189, 233, 688, 888, 965
TspDTI ATGAA 1 cut(s) 144
TspGWI ACGGA 1 cut(s) 93
TspMI CCCGGG 1 cut(s) 123
TspRI CASTG 1 cut(s) 622
VpaK11BI GGWCC 4 cut(s) 313, 547, 670, 1028
XapI RAATTY 1 cut(s) 305
XceI RCATGY 1 cut(s) 591
XmaI CCCGGG 1 cut(s) 123
XmnI GAANNNNTTC 1 cut(s) 771
XspI CTAG 5 cut(s) 53, 71, 75, 186, 336
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.