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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03050 AT5G03050 |
| fragaria_vesca | FvH4_6g36280 |
| malus_domestica | MD17G1156700.v1.1 |
| prunus_persica | Prupe.3G028700_v2.0.a1 Prupe.3G028700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0148291 |
| rosa_laevigata | RLG00000020333 |
| rosa_multiflora | Rmu_sc0002586.1_g000002 Rmu_sc0004032.1_g000014 Rmu_sc0006888.1_g000017 Rmu_sc0013350.1_g000016 Rmu_sc0015777.1_g000003 Rmu_sc0020359.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00098940 Rroxscaffold_2G00129240 Rroxscaffold_3G00245520 Rroxscaffold_4G00297960 Rroxscaffold_4G00331090 |
| rosa_rugosa | Rorug02G0405300 Rorug04G0114800 Rorug06G0390700 |
| rosa_samantha | Rh1BG203400 Rh1DG153600 Rh1DG230400 Rh2AG464000 Rh2BG477000 Rh2CG450700 Rh2DG485800 Rh5AG015200 Rh5AG348400 Rh5CG016300 Rh5CG305700 Rh5DG523500 Rh6AG225300 Rh7DG482800 |
| rosa_wichuraiana | Rw2G037820 Rw4G021890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 308 |
| AccBSI | CCGCTC | 1 cut(s) | 247 |
| AciI | CCGC | 1 cut(s) | 247 |
| AclWI | GGATC | 2 cut(s) | 127, 208 |
| AcsI | RAATTY | 1 cut(s) | 236 |
| AgsI | TTSAA | 1 cut(s) | 158 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 3 cut(s) | 136, 146, 181 |
| AluI | AGCT | 3 cut(s) | 136, 146, 181 |
| Alw21I | GWGCWC | 1 cut(s) | 264 |
| Alw26I | GTCTC | 1 cut(s) | 98 |
| Alw44I | GTGCAC | 1 cut(s) | 260 |
| AlwI | GGATC | 2 cut(s) | 127, 208 |
| Ama87I | CYCGRG | 1 cut(s) | 357 |
| AoxI | GGCC | 2 cut(s) | 210, 333 |
| ApaLI | GTGCAC | 1 cut(s) | 260 |
| ApoI | RAATTY | 1 cut(s) | 236 |
| AspLEI | GCGC | 1 cut(s) | 309 |
| AsuHPI | GGTGA | 2 cut(s) | 242, 362 |
| AsuII | TTCGAA | 1 cut(s) | 240 |
| AvaI | CYCGRG | 1 cut(s) | 357 |
| BaeGI | GKGCMC | 1 cut(s) | 264 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 177, 209 |
| Bbv12I | GWGCWC | 1 cut(s) | 264 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 338, 372 |
| BcoDI | GTCTC | 1 cut(s) | 98 |
| BfaI | CTAG | 1 cut(s) | 24 |
| BmeT110I | CYCGRG | 1 cut(s) | 357 |
| BmsI | GCATC | 2 cut(s) | 307, 318 |
| Bpu14I | TTCGAA | 1 cut(s) | 240 |
| BseGI | GGATG | 2 cut(s) | 255, 309 |
| BseMII | CTCAG | 4 cut(s) | 84, 90, 114, 191 |
| BseRI | GAGGAG | 2 cut(s) | 140, 344 |
| BseSI | GKGCMC | 1 cut(s) | 264 |
| BshFI | GGCC | 2 cut(s) | 212, 335 |
| BsiHKAI | GWGCWC | 1 cut(s) | 264 |
| BsiHKCI | CYCGRG | 1 cut(s) | 357 |
| BsmAI | GTCTC | 1 cut(s) | 98 |
| BsmBI | CGTCTC | 1 cut(s) | 98 |
| BsnI | GGCC | 2 cut(s) | 212, 335 |
| BsoBI | CYCGRG | 1 cut(s) | 357 |
| Bsp119I | TTCGAA | 1 cut(s) | 240 |
| Bsp1286I | GDGCHC | 1 cut(s) | 264 |
| Bsp143I | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| BspACI | CCGC | 1 cut(s) | 247 |
| BspANI | GGCC | 2 cut(s) | 212, 335 |
| BspCNI | CTCAG | 4 cut(s) | 83, 89, 115, 190 |
| BspPI | GGATC | 2 cut(s) | 127, 208 |
| BspQI | GCTCTTC | 2 cut(s) | 237, 348 |
| BspT104I | TTCGAA | 1 cut(s) | 240 |
| BsrBI | CCGCTC | 1 cut(s) | 247 |
| BssMI | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| Bst4CI | ACNGT | 2 cut(s) | 17, 171 |
| Bst6I | CTCTTC | 4 cut(s) | 90, 237, 285, 348 |
| BstBI | TTCGAA | 1 cut(s) | 240 |
| BstC8I | GCNNGC | 1 cut(s) | 138 |
| BstDEI | CTNAG | 4 cut(s) | 70, 76, 123, 177 |
| BstF5I | GGATG | 2 cut(s) | 255, 309 |
| BstHHI | GCGC | 1 cut(s) | 309 |
| BstKTI | GATC | 5 cut(s) | 69, 122, 165, 203, 297 |
| BstMAI | GTCTC | 1 cut(s) | 98 |
| BstMBI | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| BstSLI | GKGCMC | 1 cut(s) | 264 |
| BstX2I | RGATCY | 1 cut(s) | 119 |
| BstYI | RGATCY | 1 cut(s) | 119 |
| BsuRI | GGCC | 2 cut(s) | 212, 335 |
| BtsCI | GGATG | 2 cut(s) | 255, 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 22 |
| Cac8I | GCNNGC | 1 cut(s) | 138 |
| CfoI | GCGC | 1 cut(s) | 309 |
| CviAII | CATG | 4 cut(s) | 37, 214, 374, 380 |
| CviJI | RGCY | 5 cut(s) | 136, 146, 181, 212, 335 |
| CviKI_1 | RGCY | 5 cut(s) | 136, 146, 181, 212, 335 |
| DdeI | CTNAG | 4 cut(s) | 70, 76, 123, 177 |
| DpnI | GATC | 5 cut(s) | 68, 121, 164, 202, 296 |
| DpnII | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| Eam1104I | CTCTTC | 4 cut(s) | 90, 237, 285, 348 |
| EarI | CTCTTC | 4 cut(s) | 90, 237, 285, 348 |
| Eco88I | CYCGRG | 1 cut(s) | 357 |
| EcoRI | GAATTC | 1 cut(s) | 236 |
| Esp3I | CGTCTC | 1 cut(s) | 98 |
| FaeI | CATG | 4 cut(s) | 40, 217, 377, 383 |
| FaiI | YATR | 7 cut(s) | 38, 150, 215, 257, 351, 375, 381 |
| FatI | CATG | 4 cut(s) | 36, 213, 373, 379 |
| FokI | GGATG | 2 cut(s) | 262, 296 |
| FspBI | CTAG | 1 cut(s) | 24 |
| FspI | TGCGCA | 1 cut(s) | 308 |
| GlaI | GCGC | 1 cut(s) | 308 |
| HaeIII | GGCC | 2 cut(s) | 212, 335 |
| HhaI | GCGC | 1 cut(s) | 309 |
| Hin1II | CATG | 4 cut(s) | 40, 217, 377, 383 |
| Hin6I | GCGC | 1 cut(s) | 307 |
| HinP1I | GCGC | 1 cut(s) | 307 |
| HinfI | GANTC | 3 cut(s) | 20, 74, 386 |
| HphI | GGTGA | 2 cut(s) | 242, 362 |
| Hpy166II | GTNNAC | 2 cut(s) | 174, 262 |
| Hpy188I | TCNGA | 6 cut(s) | 73, 79, 124, 190, 222, 299 |
| Hpy188III | TCNNGA | 3 cut(s) | 24, 155, 390 |
| Hpy8I | GTNNAC | 2 cut(s) | 174, 262 |
| HpyAV | CCTTC | 2 cut(s) | 53, 202 |
| HpyCH4III | ACNGT | 2 cut(s) | 17, 171 |
| HpyCH4IV | ACGT | 1 cut(s) | 107 |
| HpyCH4V | TGCA | 3 cut(s) | 140, 262, 349 |
| HpyF3I | CTNAG | 4 cut(s) | 70, 76, 123, 177 |
| HpySE526I | ACGT | 1 cut(s) | 107 |
| Hsp92II | CATG | 4 cut(s) | 40, 217, 377, 383 |
| HspAI | GCGC | 1 cut(s) | 307 |
| Kzo9I | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| LguI | GCTCTTC | 2 cut(s) | 237, 348 |
| LmnI | GCTCC | 2 cut(s) | 62, 133 |
| LpnPI | CCDG | 6 cut(s) | 57, 102, 167, 182, 189, 272 |
| LweI | GCATC | 2 cut(s) | 307, 318 |
| MaeI | CTAG | 1 cut(s) | 24 |
| MaeII | ACGT | 1 cut(s) | 107 |
| MalI | GATC | 5 cut(s) | 68, 121, 164, 202, 296 |
| MbiI | CCGCTC | 1 cut(s) | 247 |
| MboI | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| MboII | GAAGA | 8 cut(s) | 39, 65, 68, 107, 235, 254, 302, 335 |
| MflI | RGATCY | 1 cut(s) | 119 |
| MhlI | GDGCHC | 1 cut(s) | 264 |
| MluCI | AATT | 3 cut(s) | 236, 273, 302 |
| MlyI | GAGTC | 1 cut(s) | 68 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MnlI | CCTC | 7 cut(s) | 43, 118, 121, 322, 325, 331, 353 |
| MslI | CAYNNNNRTG | 1 cut(s) | 378 |
| MspA1I | CMGCKG | 1 cut(s) | 181 |
| NdeII | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| NlaIII | CATG | 4 cut(s) | 40, 217, 377, 383 |
| NsbI | TGCGCA | 1 cut(s) | 308 |
| NspV | TTCGAA | 1 cut(s) | 240 |
| PaeR7I | CTCGAG | 1 cut(s) | 357 |
| PciSI | GCTCTTC | 2 cut(s) | 237, 348 |
| PfeI | GAWTC | 2 cut(s) | 20, 386 |
| PleI | GAGTC | 1 cut(s) | 68 |
| PpsI | GAGTC | 1 cut(s) | 68 |
| PspXI | VCTCGAGB | 1 cut(s) | 357 |
| PsuI | RGATCY | 1 cut(s) | 119 |
| PvuII | CAGCTG | 1 cut(s) | 181 |
| RseI | CAYNNNNRTG | 1 cut(s) | 378 |
| SapI | GCTCTTC | 2 cut(s) | 237, 348 |
| Sau3AI | GATC | 5 cut(s) | 66, 119, 162, 200, 294 |
| SchI | GAGTC | 1 cut(s) | 68 |
| SduI | GDGCHC | 1 cut(s) | 264 |
| SetI | ASST | 6 cut(s) | 110, 132, 138, 148, 183, 364 |
| SfaNI | GCATC | 2 cut(s) | 307, 318 |
| Sfr274I | CTCGAG | 1 cut(s) | 357 |
| SfuI | TTCGAA | 1 cut(s) | 240 |
| SlaI | CTCGAG | 1 cut(s) | 357 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 378 |
| SmlI | CTYRAG | 1 cut(s) | 357 |
| SmoI | CTYRAG | 1 cut(s) | 357 |
| Sse9I | AATT | 3 cut(s) | 236, 273, 302 |
| SsiI | CCGC | 1 cut(s) | 247 |
| SspMI | CTAG | 1 cut(s) | 24 |
| TaaI | ACNGT | 2 cut(s) | 17, 171 |
| TaiI | ACGT | 1 cut(s) | 110 |
| TaqI | TCGA | 3 cut(s) | 165, 240, 358 |
| TasI | AATT | 3 cut(s) | 236, 273, 302 |
| TfiI | GAWTC | 2 cut(s) | 20, 386 |
| TscAI | CASTG | 1 cut(s) | 22 |
| TspDTI | ATGAA | 3 cut(s) | 53, 108, 249 |
| TspRI | CASTG | 1 cut(s) | 22 |
| VneI | GTGCAC | 1 cut(s) | 260 |
| XapI | RAATTY | 1 cut(s) | 236 |
| XbaI | TCTAGA | 1 cut(s) | 23 |
| XhoI | CTCGAG | 1 cut(s) | 357 |
| XspI | CTAG | 1 cut(s) | 24 |