Prupe.4G011100_v2.0.a1

Fumarylacetoacetase N-terminal

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
537510 .. 540921
3412 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G011100.1

Sequence Viewer

Length: 1362 bp
ATGTACATTAACACCTCAGTCTATCTTCTTCACTGCGAGCTCCGCTCTGTCATCTTCTTTGTCCGAAATTTTCAACAGCTCAACGACGCCGTTTCCAGCATGGCTCTGAAGTCGTTCATCGAAGTCCACCCCAGCTCGCACTTCCCCATACAGAACCTCCCGTACGGAGCCTTCAAGCCTGACCGAGGTTCAGTGGCTCGACCGGGCGTGGCAATCGGTGACTACGTCTTGGACCTCTCTGTAATCGCCGCAGCTGGTCTCTTCAACGGTCCGATCCTCAATAACTCCGATTGCTTTCACGAGCCTAATTTGAACAAGCTATTGGCATTGGGACGGGCTGCTTGGAAGGAAGCGCGTGCTACGCTTCAGAAACTATTGTCATCTACAGAGCCATCATTGCGTGACAATGAAAGTTTAAGGCAGAAATCACTTATTCCACTGAGCGAGGTAGAAATGGTTCTTCCTATTGCCATAGGGGACTATACGGACTTCTTTTCATCCTTGCATCATGCAAAGAACTGTGGAACAATATTTCGTGGACCACAGAACCCGATTCCACCAAACTGGTTCCACCTTCCAATTGCATATCATGGTCGAGCTTCTTCAATTGTTATATCTGGAACGGACATTACTCGACCCAGAGGTCAAGGCCCTCCTGCTGGAAACTCTCCACCACCTTTCGGTCCCTCAGTGAAACTAGACTTTGAGCTCGAAATGGCTGCTATAGTTGGTCCTGGAAATGAGTTAGGAAAGCCCGTGGATGTTAATGAAGCAGCAGATCACATCTTTGGACTTGTGTTGATGAATGACTGGAGTGCTAGAGATATTCAGGCATGGGAATATGTTCCCCTTGGCCCTTTCCTTGGGAAAAGCTTTGGGACTACAATATCCCCTTGGATAGTGACGCTAGAAGCTCTAGAACCTTTTTCTTGTGAGGCTCCCAAACAGGACCCCCATCCATTGCCCTATCTGGCTGAAAAGATCTCCAAAAATTATGACATTTCATTGGAGGTTCAAATTAAACCTGCTGGACAAGATGATTCACATGTGGTCACAAAGAGTAATTTCAATAATTTATATTGGACATTGACTCAGCAGCTAGCACACCATACTATCAATGGTTGCAATTTAAGGCCGGGCGATCTCCTTGGAACAGGGACCATCAGCGGACCTGAGCCAGAATCTTATGGATGCTTGCTGGAGTTGACATGGAACGGACAAAAGCAGCTGTCCTTAAATGGGACTCCTCGTAAATTCCTAGAAGATGGAGATGAAGTCATCATTTCTGGTGTTAGCAAGGGGAATGGTTACAACATTGGCTTCGGGAGATGCTCTGGAAAGATTGTGCCATCACCTCCTTGA

Protein Analysis

454

Amino Acids

49.46

Weight (kDa)

5.81

Isoelectric Point (pI)

31.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 642
Acc36I ACCTGC 1 cut(s) 1033
AccBSI CCGCTC 1 cut(s) 45
AccII CGCG 1 cut(s) 355
AciI CCGC 3 cut(s) 43, 249, 1167
AclWI GGATC 1 cut(s) 268
AcsI RAATTY 2 cut(s) 67, 1253
AcuI CTGAAG 2 cut(s) 128, 350
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 2 cut(s) 5, 164
AfiI CCNNNNNNNGG 5 cut(s) 185, 659, 680, 863, 1239
AflIII ACRYGT 1 cut(s) 1045
AgsI TTSAA 7 cut(s) 74, 175, 265, 313, 606, 1016, 1069
AjnI CCWGG 1 cut(s) 733
AjuI GAANNNNNNNTTGG 2 cut(s) 305, 337
Alw21I GWGCWC 2 cut(s) 42, 711
Alw26I GTCTC 1 cut(s) 263
AlwI GGATC 1 cut(s) 268
AoxI GGCC 3 cut(s) 649, 853, 1133
ApeKI GCWGC 6 cut(s) 251, 338, 719, 773, 1096, 1225
ApoI RAATTY 2 cut(s) 67, 1253
Asp700I GAANNNNTTC 3 cut(s) 113, 456, 843
AspLEI GCGC 1 cut(s) 355
AsuC2I CCSGG 2 cut(s) 204, 1137
AsuHPI GGTGA 2 cut(s) 230, 1344
AsuNHI GCTAGC 1 cut(s) 1099
AvaII GGWCC 8 cut(s) 232, 269, 539, 683, 731, 949, 1158, 1169
BanII GRGCYC 2 cut(s) 42, 711
BarI GAAGNNNNNNTAC 2 cut(s) 155, 187
BauI CACGAG 1 cut(s) 299
Bbv12I GWGCWC 2 cut(s) 42, 711
BbvI GCAGC 6 cut(s) 263, 325, 706, 785, 1108, 1237
BccI CCATC 5 cut(s) 400, 963, 1169, 1259, 1357
BceAI ACGGC 1 cut(s) 74
BcgI CGANNNNNNTGC 2 cut(s) 701, 735
BciT130I CCWGG 1 cut(s) 735
BcnI CCSGG 2 cut(s) 204, 1137
BcoDI GTCTC 1 cut(s) 263
BfaI CTAG 6 cut(s) 698, 819, 908, 917, 1100, 1259
BfmI CTRYAG 2 cut(s) 384, 723
BfuAI ACCTGC 1 cut(s) 1033
BglII AGATCT 1 cut(s) 981
BisI GCNGC 7 cut(s) 249, 252, 339, 720, 774, 1097, 1226
BlsI GCNGC 7 cut(s) 250, 253, 340, 721, 775, 1098, 1227
Bme1390I CCNGG 3 cut(s) 204, 735, 1137
Bme18I GGWCC 8 cut(s) 232, 269, 539, 683, 731, 949, 1158, 1169
BmiI GGNNCC 6 cut(s) 169, 569, 685, 939, 951, 1159
BmrFI CCNGG 3 cut(s) 204, 735, 1137
BmsI GCATC 3 cut(s) 514, 1181, 1319
BmtI GCTAGC 1 cut(s) 1103
BplI GAGNNNNNCTC 2 cut(s) 29, 61
BpmI CTGGAG 2 cut(s) 832, 1220
Bpu10I CCTNAGC 1 cut(s) 1173
BpuMI CCSGG 2 cut(s) 204, 1137
BsaHI GRCGYC 1 cut(s) 87
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 6 cut(s) 184, 756, 850, 862, 893, 1147
BsaXI ACNNNNNCTCC 4 cut(s) 141, 171, 1260, 1290
Bsc4I CCNNNNNNNGG 5 cut(s) 185, 659, 680, 863, 1239
Bse1I ACTGG 2 cut(s) 569, 815
Bse3DI GCAATG 2 cut(s) 395, 959
BseBI CCWGG 1 cut(s) 735
BseDI CCNNGG 6 cut(s) 184, 756, 850, 862, 893, 1147
BseGI GGATG 4 cut(s) 497, 766, 955, 1196
BseLI CCNNNNNNNGG 5 cut(s) 185, 659, 680, 863, 1239
BseMI GCAATG 2 cut(s) 395, 959
BseMII CTCAG 5 cut(s) 30, 431, 702, 1106, 1164
BseNI ACTGG 2 cut(s) 569, 815
BseRI GAGGAG 1 cut(s) 1236
BseXI GCAGC 6 cut(s) 263, 325, 706, 785, 1108, 1237
BseYI CCCAGC 1 cut(s) 131
Bsh1236I CGCG 1 cut(s) 355
Bsh1285I CGRYCG 1 cut(s) 203
BshFI GGCC 3 cut(s) 651, 855, 1135
BsiEI CGRYCG 1 cut(s) 203
BsiHKAI GWGCWC 2 cut(s) 42, 711
BsiSI CCGG 2 cut(s) 203, 1136
BsiWI CGTACG 1 cut(s) 162
BslFI GGGAC 6 cut(s) 345, 491, 669, 892, 1171, 1255
BslI CCNNNNNNNGG 5 cut(s) 185, 659, 680, 863, 1239
BsmAI GTCTC 1 cut(s) 263
BsmFI GGGAC 6 cut(s) 345, 491, 669, 892, 1171, 1255
BsnI GGCC 3 cut(s) 651, 855, 1135
Bso31I GGTCTC 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 42, 711
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 4 cut(s) 273, 778, 981, 1141
BspACI CCGC 3 cut(s) 43, 249, 1167
BspANI GGCC 3 cut(s) 651, 855, 1135
BspCNI CTCAG 5 cut(s) 29, 432, 701, 1105, 1165
BspFNI CGCG 1 cut(s) 355
BspLI GGNNCC 6 cut(s) 169, 569, 685, 939, 951, 1159
BspMI ACCTGC 1 cut(s) 1033
BspOI GCTAGC 1 cut(s) 1103
BspPI GGATC 1 cut(s) 268
BspTNI GGTCTC 1 cut(s) 263
BsrBI CCGCTC 1 cut(s) 45
BsrDI GCAATG 2 cut(s) 395, 959
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 569, 815
BssECI CCNNGG 6 cut(s) 184, 756, 850, 862, 893, 1147
BssMI GATC 4 cut(s) 273, 778, 981, 1141
BssNI GRCGYC 1 cut(s) 87
BssSI CACGAG 1 cut(s) 299
BssT1I CCWWGG 4 cut(s) 850, 862, 893, 1147
Bst2BI CACGAG 1 cut(s) 299
Bst2UI CCWGG 1 cut(s) 735
Bst4CI ACNGT 2 cut(s) 269, 521
Bst6I CTCTTC 1 cut(s) 266
BstACI GRCGYC 1 cut(s) 87
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 5 cut(s) 38, 137, 357, 1101, 1196
BstDEI CTNAG 5 cut(s) 16, 440, 688, 1092, 1173
BstDSI CCRYGG 1 cut(s) 756
BstENI CCTNNNNNAGG 1 cut(s) 183
BstF5I GGATG 4 cut(s) 497, 766, 955, 1196
BstFNI CGCG 1 cut(s) 355
BstHHI GCGC 1 cut(s) 355
BstKTI GATC 4 cut(s) 276, 781, 984, 1144
BstMAI GTCTC 1 cut(s) 263
BstMBI GATC 4 cut(s) 273, 778, 981, 1141
BstMCI CGRYCG 1 cut(s) 203
BstMWI GCNNNNNNNGC 3 cut(s) 42, 361, 397
BstNI CCWGG 1 cut(s) 735
BstNSI RCATGY 1 cut(s) 1049
BstSCI CCNGG 3 cut(s) 202, 733, 1135
BstSFI CTRYAG 2 cut(s) 384, 723
BstUI CGCG 1 cut(s) 355
BstV1I GCAGC 6 cut(s) 263, 325, 706, 785, 1108, 1237
BstX2I RGATCY 1 cut(s) 981
BstXI CCANNNNNNTGG 1 cut(s) 564
BstYI RGATCY 1 cut(s) 981
BsuRI GGCC 3 cut(s) 651, 855, 1135
BtgI CCRYGG 1 cut(s) 756
BtsCI GGATG 4 cut(s) 497, 766, 955, 1196
BtsI GCAGTG 1 cut(s) 31
BtsIMutI CAGTG 4 cut(s) 31, 198, 437, 696
BveI ACCTGC 1 cut(s) 1033
Cac8I GCNNGC 5 cut(s) 38, 137, 357, 1101, 1196
CfoI GCGC 1 cut(s) 355
CpoI CGGWCCG 1 cut(s) 269
CseI GACGC 2 cut(s) 95, 913
Csp6I GTAC 2 cut(s) 4, 163
CspI CGGWCCG 1 cut(s) 269
CviAII CATG 6 cut(s) 100, 509, 590, 834, 1046, 1209
CviQI GTAC 2 cut(s) 4, 163
DdeI CTNAG 5 cut(s) 16, 440, 688, 1092, 1173
DpnI GATC 4 cut(s) 275, 780, 983, 1143
DpnII GATC 4 cut(s) 273, 778, 981, 1141
DrdI GACNNNNNNGTC 1 cut(s) 642
DseDI GACNNNNNNGTC 1 cut(s) 642
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
Ecl136II GAGCTC 2 cut(s) 40, 709
Eco130I CCWWGG 4 cut(s) 850, 862, 893, 1147
Eco24I GRGCYC 2 cut(s) 42, 711
Eco31I GGTCTC 1 cut(s) 263
Eco47I GGWCC 8 cut(s) 232, 269, 539, 683, 731, 949, 1158, 1169
Eco53kI GAGCTC 2 cut(s) 40, 709
Eco57I CTGAAG 2 cut(s) 128, 350
EcoICRI GAGCTC 2 cut(s) 40, 709
EcoNI CCTNNNNNAGG 1 cut(s) 183
EcoO109I RGGNCCY 2 cut(s) 650, 949
EcoRII CCWGG 1 cut(s) 733
EcoT14I CCWWGG 4 cut(s) 850, 862, 893, 1147
EcoT38I GRGCYC 2 cut(s) 42, 711
ErhI CCWWGG 4 cut(s) 850, 862, 893, 1147
FaeI CATG 6 cut(s) 103, 512, 593, 837, 1049, 1212
FaqI GGGAC 6 cut(s) 345, 491, 669, 892, 1171, 1255
FatI CATG 6 cut(s) 99, 508, 589, 833, 1045, 1208
Fnu4HI GCNGC 7 cut(s) 249, 252, 339, 720, 774, 1097, 1226
FokI GGATG 4 cut(s) 484, 773, 942, 1203
FriOI GRGCYC 2 cut(s) 42, 711
Fsp4HI GCNGC 7 cut(s) 249, 252, 339, 720, 774, 1097, 1226
FspBI CTAG 6 cut(s) 698, 819, 908, 917, 1100, 1259
GlaI GCGC 1 cut(s) 354
GluI GCNGC 7 cut(s) 249, 252, 339, 720, 774, 1097, 1226
GsaI CCCAGC 1 cut(s) 135
GsuI CTGGAG 2 cut(s) 832, 1220
HaeIII GGCC 3 cut(s) 651, 855, 1135
HapII CCGG 2 cut(s) 203, 1136
HgaI GACGC 2 cut(s) 95, 913
HhaI GCGC 1 cut(s) 355
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 6 cut(s) 103, 512, 593, 837, 1049, 1212
Hin6I GCGC 1 cut(s) 353
HinP1I GCGC 1 cut(s) 353
HincII GTYRAC 1 cut(s) 1206
HindII GTYRAC 1 cut(s) 1206
HindIII AAGCTT 1 cut(s) 871
HinfI GANTC 5 cut(s) 553, 1040, 1090, 1181, 1243
HpaII CCGG 2 cut(s) 203, 1136
HphI GGTGA 2 cut(s) 230, 1344
Hpy166II GTNNAC 3 cut(s) 127, 539, 1206
Hpy188I TCNGA 5 cut(s) 65, 108, 273, 289, 369
Hpy188III TCNNGA 5 cut(s) 299, 618, 917, 1324, 1335
Hpy8I GTNNAC 3 cut(s) 127, 539, 1206
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 3 cut(s) 181, 340, 584
HpyCH4III ACNGT 2 cut(s) 269, 521
HpyCH4IV ACGT 1 cut(s) 225
HpyCH4V TGCA 4 cut(s) 505, 512, 584, 1125
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 361, 397
HpyF3I CTNAG 5 cut(s) 16, 440, 688, 1092, 1173
HpySE526I ACGT 1 cut(s) 225
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 6 cut(s) 103, 512, 593, 837, 1049, 1212
HspAI GCGC 1 cut(s) 353
Kzo9I GATC 4 cut(s) 273, 778, 981, 1141
LmnI GCTCC 3 cut(s) 45, 167, 943
Lsp1109I GCAGC 6 cut(s) 263, 325, 706, 785, 1108, 1237
LweI GCATC 3 cut(s) 514, 1181, 1319
MaeI CTAG 6 cut(s) 698, 819, 908, 917, 1100, 1259
MaeII ACGT 1 cut(s) 225
MaeIII GTNAC 5 cut(s) 218, 401, 901, 1051, 1307
MalI GATC 4 cut(s) 275, 780, 983, 1143
MbiI CCGCTC 1 cut(s) 45
MboI GATC 4 cut(s) 273, 778, 981, 1141
MboII GAAGA 7 cut(s) 17, 20, 46, 253, 452, 594, 1274
MfeI CAATTG 2 cut(s) 579, 606
MflI RGATCY 1 cut(s) 981
MhlI GDGCHC 2 cut(s) 42, 711
MlyI GAGTC 2 cut(s) 1084, 1237
MroXI GAANNNNTTC 3 cut(s) 113, 456, 843
MseI TTAA 6 cut(s) 9, 416, 765, 1020, 1130, 1235
MspA1I CMGCKG 3 cut(s) 254, 1167, 1228
MspI CCGG 2 cut(s) 203, 1136
MspR9I CCNGG 3 cut(s) 204, 735, 1137
MunI CAATTG 2 cut(s) 579, 606
MvaI CCWGG 1 cut(s) 735
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 3 cut(s) 42, 361, 397
NciI CCSGG 2 cut(s) 204, 1137
NdeII GATC 4 cut(s) 273, 778, 981, 1141
NheI GCTAGC 1 cut(s) 1099
NlaIII CATG 6 cut(s) 103, 512, 593, 837, 1049, 1212
NlaIV GGNNCC 6 cut(s) 169, 569, 685, 939, 951, 1159
NmuCI GTSAC 4 cut(s) 218, 401, 901, 1051
NspI RCATGY 1 cut(s) 1049
PciI ACATGT 1 cut(s) 1045
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PdmI GAANNNNTTC 3 cut(s) 113, 456, 843
PfeI GAWTC 3 cut(s) 553, 1040, 1181
Pfl23II CGTACG 1 cut(s) 162
PflFI GACNNNGTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 733
PkrI GCNGC 7 cut(s) 250, 253, 340, 721, 775, 1098, 1227
PleI GAGTC 2 cut(s) 1084, 1237
PpsI GAGTC 2 cut(s) 1084, 1237
PpuMI RGGWCCY 1 cut(s) 949
PscI ACATGT 1 cut(s) 1045
Psp124BI GAGCTC 2 cut(s) 42, 711
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 1 cut(s) 733
PspFI CCCAGC 1 cut(s) 131
PspGI CCWGG 1 cut(s) 733
PspLI CGTACG 1 cut(s) 162
PspN4I GGNNCC 6 cut(s) 169, 569, 685, 939, 951, 1159
PspPPI RGGWCCY 1 cut(s) 949
PsrI GAACNNNNNNTAC 6 cut(s) 146, 178, 441, 473, 613, 645
PsuI RGATCY 1 cut(s) 981
PsyI GACNNNGTC 1 cut(s) 224
PvuII CAGCTG 2 cut(s) 254, 1228
RsaI GTAC 2 cut(s) 5, 164
RsaNI GTAC 2 cut(s) 4, 163
Rsr2I CGGWCCG 1 cut(s) 269
RsrII CGGWCCG 1 cut(s) 269
SacI GAGCTC 2 cut(s) 42, 711
SaqAI TTAA 6 cut(s) 9, 416, 765, 1020, 1130, 1235
SatI GCNGC 7 cut(s) 249, 252, 339, 720, 774, 1097, 1226
Sau3AI GATC 4 cut(s) 273, 778, 981, 1141
SchI GAGTC 2 cut(s) 1084, 1237
ScrFI CCNGG 3 cut(s) 204, 735, 1137
SduI GDGCHC 2 cut(s) 42, 711
SfaNI GCATC 3 cut(s) 514, 1181, 1319
SfcI CTRYAG 2 cut(s) 384, 723
SinI GGWCC 8 cut(s) 232, 269, 539, 683, 731, 949, 1158, 1169
SsiI CCGC 3 cut(s) 43, 249, 1167
SspI AATATT 1 cut(s) 531
SspMI CTAG 6 cut(s) 698, 819, 908, 917, 1100, 1259
SstI GAGCTC 2 cut(s) 42, 711
StyD4I CCNGG 3 cut(s) 202, 733, 1135
StyI CCWWGG 4 cut(s) 850, 862, 893, 1147
TaaI ACNGT 2 cut(s) 269, 521
TaiI ACGT 1 cut(s) 228
TaqI TCGA 5 cut(s) 120, 199, 595, 634, 711
TaqII GACCGA 2 cut(s) 198, 671
TatI WGTACW 1 cut(s) 3
TauI GCSGC 1 cut(s) 251
TfiI GAWTC 3 cut(s) 553, 1040, 1181
Tru1I TTAA 6 cut(s) 9, 416, 765, 1020, 1130, 1235
Tru9I TTAA 6 cut(s) 9, 416, 765, 1020, 1130, 1235
TscAI CASTG 4 cut(s) 38, 198, 444, 696
TseFI GTSAC 4 cut(s) 218, 401, 901, 1051
TseI GCWGC 6 cut(s) 251, 338, 719, 773, 1096, 1225
Tsp45I GTSAC 4 cut(s) 218, 401, 901, 1051
TspDTI ATGAA 7 cut(s) 106, 423, 486, 783, 818, 993, 1287
TspGWI ACGGA 4 cut(s) 180, 500, 638, 1230
TspRI CASTG 4 cut(s) 38, 198, 444, 696
Tth111I GACNNNGTC 1 cut(s) 224
VpaK11BI GGWCC 8 cut(s) 232, 269, 539, 683, 731, 949, 1158, 1169
XagI CCTNNNNNAGG 1 cut(s) 183
XapI RAATTY 2 cut(s) 67, 1253
XbaI TCTAGA 1 cut(s) 916
XceI RCATGY 1 cut(s) 1049
XcmI CCANNNNNNNNNTGG 1 cut(s) 1115
XmnI GAANNNNTTC 3 cut(s) 113, 456, 843
XspI CTAG 6 cut(s) 698, 819, 908, 917, 1100, 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.