Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003811

Physical Location & Seq

Genomic Coordinates Reverse (-)

801810 .. 805208

Gene Structure 3399 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG012300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGCTCTCACTTCCTTCATCGAAGTCGACCCGAGCTCTCACTTCCCCATACAGAACCTCCCCTTCGGAGTGTTCAAGCCCGAACCGGCTTCACCGCCTCGACCGGGCGTGGCCATCGGCGATTACGTCTTGGACTTGTCAGCTATCGCCGCCGCCGGCCTCTTCAACGGTCCGATCCTCAGTAACTCCGATTGCTTTCATCAGCCTAATCTGAACAAGTTCTTGGCCTTGGGACGACCTGCTTGGAAGGAAGCACGTGCCACACTTCAGAAGCTACTTTCATCTACTGAGCCAACATTGCGTGATAATGAAAGTTTAAAGCAGAAATCACTGATTCCATTGAGCAAGGTGGAAATGCTGGTTCCTATGGCGATTGGGGACTATTCGGACTTCTTTTCATCGATGCATCACGCAAAGAACTGCGGGACCATGTTTCGTGGTCCACAGAATGCAATTCAACCGAACTGGTTTCACCTACCAATTGCATATCATGGACGAGCTTCGTCAATTGTTGTCTCTGGAACGGACATTATTCGACCCAGAGGTCAAGGACCTCCTAGTGGAAACTCTACACCATATTTTGGTCCCTCACTGAAACTAGATTTTGAGCTTGAAATGGCTGCTGTAGTCGGTCCTGGAAATGAATTAGGAAAGCCGGTGGATGTGAATGAGGCAGCAGATCATATTTTTGGACTTGTCTTGATGAATGACTGGAGTGCTAGAGATATCCAGGCATGGGAATATATTCCCCTTGGTCCTTTCCTTGGAAAAAGTTTTGGAACTACAATATCTCCTTGGATAGTGACACTCGAAGCTCTAGAACCATTTTCCTGTGATGCTCCCAAACAGGACCCCCATCCATTGCCCTATCTGGCTGAAAAGATCTCCAAAAATTATGACATAAAATTGGAGGTTCAAATTAAACCAGCTGGAGAGAAAGACTCATCCGTGGTCACAAAGAGTAATTTCAACCACTTATATTGGACAGTGACTCAGCAGCTGGCACATCATACAATCAATGGTTGTAACTTAAGGCCTGGAGATCTCCTTGGAACTGGGACGATTAGTGGACCTGAGCCAGAATCGTATGGATGCTTGCTAGAGTTGACATGGAATGGACAAAAGCAGTTGTCATTAAATGGCGTTACTCGTAAATTCCTTGAAGATGGAGATGAAGTCATCATTACTGGTTTTAGCAAGGGAAATGGCTACAATGTTGGGTTCGGGACATGCTCTGGAAAGATTCTTCCCCCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004334 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016787 GO:0016822 GO:0016823 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0071704 GO:0072329 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

FAA_hydrolase FAA_hydrolase_N

Protein Analysis

419

Amino Acids

45.59

Weight (kDa)

5.78

Isoelectric Point (pI)

30.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAA_hydrolase_N	PF09298	18 - 122	5e-35	Fumarylacetoacetase N-terminal
FAA_hydrolase	PF01557	132 - 397	1.7e-39	Fumarylacetoacetate (FAA) hydrolase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12050
fragaria_vesca	FvH4_3g01030
malus_domestica	MD10G1331100.v1.1
prunus_persica	Prupe.4G011100_v2.0.a1
pyrus_communis	pycom10g28060
rosa_chinensis	RchiOBHm_Chr3g0477951 RchiOBHm_Chr3g0484131 RchiOBHm_Chr5g0001571 RchiOBHm_Chr5g0003621
rosa_laevigata	RLG00000030938 RLG00000030942
rosa_multiflora	Rmu_co8093718.1_g000001 Rmu_sc0003749.1_g000003 Rmu_sc0005991.1_g000008 Rmu_sc0006320.1_g000011 Rmu_sc0029518.1_g000002 Rmu_sc0040965.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074840
rosa_rugosa	Rorug02G0302800 Rorug03G0164100 Rorug04G0391100
rosa_samantha	Rh3AG214900 Rh3AG258900 Rh3BG248500 Rh3CG242500 Rh3DG241900 Rh5AG012300 Rh5BG014900 Rh5BG015100 Rh5CG013300 Rh5DG012600 Rh5DG012700
rosa_wichuraiana	Rw3G019370 Rw5G001170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	543
Acc36I	ACCTGC	1 cut(s)	247
AccB7I	CCANNNNNTGG	1 cut(s)	581
AccI	GTMKAC	1 cut(s)	27
AciI	CCGC	4 cut(s)	95, 150, 153, 423
AclWI	GGATC	1 cut(s)	169
AcoI	YGGCCR	1 cut(s)	111
AcsI	RAATTY	1 cut(s)	1154
AcuI	CTGAAG	1 cut(s)	251
AcvI	CACGTG	1 cut(s)	257
AfiI	CCNNNNNNNGG	5 cut(s)	104, 560, 581, 736, 764
AflII	CTTAAG	1 cut(s)	1030
AgsI	TTSAA	7 cut(s)	76, 166, 458, 614, 917, 970, 1163
AjnI	CCWGG	3 cut(s)	634, 729, 1036
AjuI	GAANNNNNNNTTGG	2 cut(s)	206, 238
AluBI	AGCT	8 cut(s)	36, 143, 274, 500, 610, 815, 929, 1000
AluI	AGCT	8 cut(s)	36, 143, 274, 500, 610, 815, 929, 1000
Alw21I	GWGCWC	1 cut(s)	38
Alw26I	GTCTC	1 cut(s)	520
AlwI	GGATC	1 cut(s)	169
AlwNI	CAGNNNCTG	1 cut(s)	1000
Ama87I	CYCGRG	1 cut(s)	31
AoxI	GGCC	4 cut(s)	111, 157, 225, 1034
ApeKI	GCWGC	3 cut(s)	620, 674, 997
ApoI	RAATTY	1 cut(s)	1154
Asp700I	GAANNNNTTC	2 cut(s)	218, 744
AspS9I	GGNCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	2 cut(s)	84, 464
AvaI	CYCGRG	1 cut(s)	31
AvaII	GGWCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
BalI	TGGCCA	1 cut(s)	113
BanII	GRGCYC	1 cut(s)	38
BbrPI	CACGTG	1 cut(s)	257
Bbv12I	GWGCWC	1 cut(s)	38
BbvI	GCAGC	3 cut(s)	607, 686, 1009
BccI	CCATC	3 cut(s)	122, 864, 1160
BciT130I	CCWGG	3 cut(s)	636, 731, 1038
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	1 cut(s)	520
BfaI	CTAG	5 cut(s)	558, 599, 720, 818, 1100
BfmI	CTRYAG	1 cut(s)	624
BfrI	CTTAAG	1 cut(s)	1030
BfuAI	ACCTGC	1 cut(s)	247
BglII	AGATCT	2 cut(s)	882, 1042
BisI	GCNGC	5 cut(s)	150, 153, 621, 675, 998
BlsI	GCNGC	5 cut(s)	151, 154, 622, 676, 999
Bme1390I	CCNGG	4 cut(s)	105, 636, 731, 1038
Bme18I	GGWCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
BmeT110I	CYCGRG	1 cut(s)	31
BmgT120I	GGNCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
BmiI	GGNNCC	4 cut(s)	363, 427, 586, 852
BmrFI	CCNGG	4 cut(s)	105, 636, 731, 1038
BmrI	ACTGGG	1 cut(s)	1065
BmsI	GCATC	4 cut(s)	393, 415, 826, 1082
BmuI	ACTGGG	1 cut(s)	1065
BplI	GAGNNNNNCTC	2 cut(s)	926, 958
BpmI	CTGGAG	3 cut(s)	733, 951, 1059
Bpu10I	CCTNAGC	1 cut(s)	1074
BpuMI	CCSGG	1 cut(s)	105
Bsa29I	ATCGAT	1 cut(s)	401
BsaAI	YACGTR	1 cut(s)	257
BsaJI	CCNNGG	6 cut(s)	228, 751, 763, 794, 948, 1048
BsaXI	ACNNNNNCTCC	6 cut(s)	42, 72, 775, 805, 1161, 1191
Bsc4I	CCNNNNNNNGG	5 cut(s)	104, 560, 581, 736, 764
Bse118I	RCCGGY	3 cut(s)	85, 155, 655
Bse1I	ACTGG	4 cut(s)	470, 716, 1060, 1192
Bse3DI	GCAATG	2 cut(s)	296, 860
BseBI	CCWGG	3 cut(s)	636, 731, 1038
BseCI	ATCGAT	1 cut(s)	401
BseDI	CCNNGG	6 cut(s)	228, 751, 763, 794, 948, 1048
BseGI	GGATG	4 cut(s)	667, 856, 944, 1097
BseLI	CCNNNNNNNGG	5 cut(s)	104, 560, 581, 736, 764
BseMI	GCAATG	2 cut(s)	296, 860
BseMII	CTCAG	4 cut(s)	193, 279, 1007, 1065
BseNI	ACTGG	4 cut(s)	470, 716, 1060, 1192
BseXI	GCAGC	3 cut(s)	607, 686, 1009
Bsh1285I	CGRYCG	1 cut(s)	104
BshFI	GGCC	4 cut(s)	113, 159, 227, 1036
BshVI	ATCGAT	1 cut(s)	401
BsiEI	CGRYCG	1 cut(s)	104
BsiHKAI	GWGCWC	1 cut(s)	38
BsiHKCI	CYCGRG	1 cut(s)	31
BsiSI	CCGG	4 cut(s)	86, 104, 156, 656
BslFI	GGGAC	6 cut(s)	246, 392, 439, 570, 1072, 1240
BslI	CCNNNNNNNGG	5 cut(s)	104, 560, 581, 736, 764
BsmAI	GTCTC	1 cut(s)	520
BsmFI	GGGAC	6 cut(s)	246, 392, 439, 570, 1072, 1240
BsmI	GAATGC	1 cut(s)	454
BsnI	GGCC	4 cut(s)	113, 159, 227, 1036
BsoBI	CYCGRG	1 cut(s)	31
Bsp1286I	GDGCHC	1 cut(s)	38
Bsp143I	GATC	4 cut(s)	174, 679, 882, 1042
BspACI	CCGC	4 cut(s)	95, 150, 153, 423
BspANI	GGCC	4 cut(s)	113, 159, 227, 1036
BspCNI	CTCAG	4 cut(s)	192, 280, 1006, 1066
BspDI	ATCGAT	1 cut(s)	401
BspLI	GGNNCC	4 cut(s)	363, 427, 586, 852
BspMI	ACCTGC	1 cut(s)	247
BspPI	GGATC	1 cut(s)	169
BspTI	CTTAAG	1 cut(s)	1030
BsrDI	GCAATG	2 cut(s)	296, 860
BsrFI	RCCGGY	3 cut(s)	85, 155, 655
BsrI	ACTGG	4 cut(s)	470, 716, 1060, 1192
BssAI	RCCGGY	3 cut(s)	85, 155, 655
BssECI	CCNNGG	6 cut(s)	228, 751, 763, 794, 948, 1048
BssMI	GATC	4 cut(s)	174, 679, 882, 1042
BssT1I	CCWWGG	5 cut(s)	228, 751, 763, 794, 1048
Bst2UI	CCWGG	3 cut(s)	636, 731, 1038
Bst4CI	ACNGT	2 cut(s)	170, 988
Bst6I	CTCTTC	1 cut(s)	167
BstAFI	CTTAAG	1 cut(s)	1030
BstBAI	YACGTR	1 cut(s)	257
BstC8I	GCNNGC	3 cut(s)	157, 1002, 1097
BstDEI	CTNAG	4 cut(s)	179, 288, 993, 1074
BstDSI	CCRYGG	1 cut(s)	948
BstF5I	GGATG	4 cut(s)	667, 856, 944, 1097
BstKTI	GATC	4 cut(s)	177, 682, 885, 1045
BstMAI	GTCTC	1 cut(s)	520
BstMBI	GATC	4 cut(s)	174, 679, 882, 1042
BstMCI	CGRYCG	1 cut(s)	104
BstMWI	GCNNNNNNNGC	2 cut(s)	149, 298
BstNI	CCWGG	3 cut(s)	636, 731, 1038
BstNSI	RCATGY	1 cut(s)	1233
BstSCI	CCNGG	4 cut(s)	103, 634, 729, 1036
BstSFI	CTRYAG	1 cut(s)	624
BstV1I	GCAGC	3 cut(s)	607, 686, 1009
BstX2I	RGATCY	2 cut(s)	882, 1042
BstYI	RGATCY	2 cut(s)	882, 1042
Bsu15I	ATCGAT	1 cut(s)	401
BsuRI	GGCC	4 cut(s)	113, 159, 227, 1036
BsuTUI	ATCGAT	1 cut(s)	401
BtgI	CCRYGG	1 cut(s)	948
BtsCI	GGATG	4 cut(s)	667, 856, 944, 1097
BtsIMutI	CAGTG	3 cut(s)	329, 590, 993
BveI	ACCTGC	1 cut(s)	247
Cac8I	GCNNGC	3 cut(s)	157, 1002, 1097
CaiI	CAGNNNCTG	1 cut(s)	1000
Cfr10I	RCCGGY	3 cut(s)	85, 155, 655
Cfr13I	GGNCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
ClaI	ATCGAT	1 cut(s)	401
CpoI	CGGWCCG	1 cut(s)	170
CspCI	CAANNNNNGTGG	2 cut(s)	962, 997
CspI	CGGWCCG	1 cut(s)	170
CviAII	CATG	5 cut(s)	430, 491, 735, 1110, 1230
DdeI	CTNAG	4 cut(s)	179, 288, 993, 1074
DpnI	GATC	4 cut(s)	176, 681, 884, 1044
DpnII	GATC	4 cut(s)	174, 679, 882, 1042
DraI	TTTAAA	1 cut(s)	318
DrdI	GACNNNNNNGTC	1 cut(s)	543
DseDI	GACNNNNNNGTC	1 cut(s)	543
EaeI	YGGCCR	1 cut(s)	111
Eam1104I	CTCTTC	1 cut(s)	167
EarI	CTCTTC	1 cut(s)	167
Ecl136II	GAGCTC	1 cut(s)	36
Eco130I	CCWWGG	5 cut(s)	228, 751, 763, 794, 1048
Eco147I	AGGCCT	1 cut(s)	1036
Eco24I	GRGCYC	1 cut(s)	38
Eco32I	GATATC	1 cut(s)	727
Eco47I	GGWCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
Eco53kI	GAGCTC	1 cut(s)	36
Eco57I	CTGAAG	1 cut(s)	251
Eco72I	CACGTG	1 cut(s)	257
Eco88I	CYCGRG	1 cut(s)	31
EcoICRI	GAGCTC	1 cut(s)	36
EcoO109I	RGGNCCY	2 cut(s)	551, 850
EcoRII	CCWGG	3 cut(s)	634, 729, 1036
EcoRV	GATATC	1 cut(s)	727
EcoT14I	CCWWGG	5 cut(s)	228, 751, 763, 794, 1048
EcoT22I	ATGCAT	1 cut(s)	408
EcoT38I	GRGCYC	1 cut(s)	38
ErhI	CCWWGG	5 cut(s)	228, 751, 763, 794, 1048
FaeI	CATG	5 cut(s)	433, 494, 738, 1113, 1233
FaqI	GGGAC	6 cut(s)	246, 392, 439, 570, 1072, 1240
FatI	CATG	5 cut(s)	429, 490, 734, 1109, 1229
FauI	CCCGC	1 cut(s)	416
FblI	GTMKAC	1 cut(s)	27
Fnu4HI	GCNGC	5 cut(s)	150, 153, 621, 675, 998
FokI	GGATG	4 cut(s)	674, 843, 931, 1104
FriOI	GRGCYC	1 cut(s)	38
Fsp4HI	GCNGC	5 cut(s)	150, 153, 621, 675, 998
FspBI	CTAG	5 cut(s)	558, 599, 720, 818, 1100
GluI	GCNGC	5 cut(s)	150, 153, 621, 675, 998
GsuI	CTGGAG	3 cut(s)	733, 951, 1059
HaeIII	GGCC	4 cut(s)	113, 159, 227, 1036
HapII	CCGG	4 cut(s)	86, 104, 156, 656
Hin1II	CATG	5 cut(s)	433, 494, 738, 1113, 1233
HincII	GTYRAC	2 cut(s)	28, 1107
HindII	GTYRAC	2 cut(s)	28, 1107
HinfI	GANTC	5 cut(s)	334, 941, 991, 1082, 1243
HpaII	CCGG	4 cut(s)	86, 104, 156, 656
HphI	GGTGA	2 cut(s)	84, 464
Hpy166II	GTNNAC	4 cut(s)	28, 443, 1070, 1107
Hpy188I	TCNGA	6 cut(s)	68, 174, 190, 213, 270, 388
Hpy188III	TCNNGA	5 cut(s)	519, 700, 818, 1225, 1236
Hpy8I	GTNNAC	4 cut(s)	28, 443, 1070, 1107
HpyAV	CCTTC	3 cut(s)	25, 73, 241
HpyCH4III	ACNGT	2 cut(s)	170, 988
HpyCH4IV	ACGT	2 cut(s)	126, 256
HpyCH4V	TGCA	3 cut(s)	406, 452, 485
HpyF10VI	GCNNNNNNNGC	2 cut(s)	149, 298
HpyF3I	CTNAG	4 cut(s)	179, 288, 993, 1074
HpySE526I	ACGT	2 cut(s)	126, 256
Hsp92II	CATG	5 cut(s)	433, 494, 738, 1113, 1233
KroI	GCCGGC	1 cut(s)	155
KroNI	GCCGGC	1 cut(s)	157
Kzo9I	GATC	4 cut(s)	174, 679, 882, 1042
LmnI	GCTCC	1 cut(s)	844
Lsp1109I	GCAGC	3 cut(s)	607, 686, 1009
LweI	GCATC	4 cut(s)	393, 415, 826, 1082
MaeI	CTAG	5 cut(s)	558, 599, 720, 818, 1100
MaeII	ACGT	2 cut(s)	126, 256
MaeIII	GTNAC	6 cut(s)	182, 802, 952, 988, 1025, 1144
MalI	GATC	4 cut(s)	176, 681, 884, 1044
MboI	GATC	4 cut(s)	174, 679, 882, 1042
MboII	GAAGA	3 cut(s)	154, 1175, 1238
MfeI	CAATTG	2 cut(s)	480, 507
MflI	RGATCY	2 cut(s)	882, 1042
MhlI	GDGCHC	1 cut(s)	38
MlsI	TGGCCA	1 cut(s)	113
MluCI	AATT	9 cut(s)	453, 480, 507, 644, 892, 905, 918, 964, 1154
MluNI	TGGCCA	1 cut(s)	113
MlyI	GAGTC	2 cut(s)	935, 985
MnlI	CCTC	9 cut(s)	68, 108, 170, 188, 536, 564, 598, 664, 904
Mox20I	TGGCCA	1 cut(s)	113
Mph1103I	ATGCAT	1 cut(s)	408
MroNI	GCCGGC	1 cut(s)	155
MroXI	GAANNNNTTC	2 cut(s)	218, 744
MscI	TGGCCA	1 cut(s)	113
MseI	TTAA	4 cut(s)	317, 921, 1031, 1136
Msp20I	TGGCCA	1 cut(s)	113
MspA1I	CMGCKG	2 cut(s)	929, 1000
MspCI	CTTAAG	1 cut(s)	1030
MspI	CCGG	4 cut(s)	86, 104, 156, 656
MspR9I	CCNGG	4 cut(s)	105, 636, 731, 1038
MunI	CAATTG	2 cut(s)	480, 507
Mva1269I	GAATGC	1 cut(s)	454
MvaI	CCWGG	3 cut(s)	636, 731, 1038
MwoI	GCNNNNNNNGC	2 cut(s)	149, 298
NaeI	GCCGGC	1 cut(s)	157
NciI	CCSGG	1 cut(s)	105
NdeII	GATC	4 cut(s)	174, 679, 882, 1042
NgoMIV	GCCGGC	1 cut(s)	155
NlaIII	CATG	5 cut(s)	433, 494, 738, 1113, 1233
NlaIV	GGNNCC	4 cut(s)	363, 427, 586, 852
NmuCI	GTSAC	3 cut(s)	802, 952, 988
NsiI	ATGCAT	1 cut(s)	408
NspI	RCATGY	1 cut(s)	1233
PceI	AGGCCT	1 cut(s)	1036
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PctI	GAATGC	1 cut(s)	454
PdiI	GCCGGC	1 cut(s)	157
PdmI	GAANNNNTTC	2 cut(s)	218, 744
PfeI	GAWTC	3 cut(s)	334, 1082, 1243
PflMI	CCANNNNNTGG	1 cut(s)	581
PfoI	TCCNGGA	1 cut(s)	634
PkrI	GCNGC	5 cut(s)	151, 154, 622, 676, 999
PleI	GAGTC	2 cut(s)	935, 985
PmaCI	CACGTG	1 cut(s)	257
PmlI	CACGTG	1 cut(s)	257
PpsI	GAGTC	2 cut(s)	935, 985
Ppu21I	YACGTR	1 cut(s)	257
PpuMI	RGGWCCY	2 cut(s)	551, 850
Psp124BI	GAGCTC	1 cut(s)	38
Psp5II	RGGWCCY	2 cut(s)	551, 850
Psp6I	CCWGG	3 cut(s)	634, 729, 1036
PspCI	CACGTG	1 cut(s)	257
PspGI	CCWGG	3 cut(s)	634, 729, 1036
PspN4I	GGNNCC	4 cut(s)	363, 427, 586, 852
PspPI	GGNCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
PspPPI	RGGWCCY	2 cut(s)	551, 850
PstNI	CAGNNNCTG	1 cut(s)	1000
PsuI	RGATCY	2 cut(s)	882, 1042
PvuII	CAGCTG	2 cut(s)	929, 1000
Rsr2I	CGGWCCG	1 cut(s)	170
RsrII	CGGWCCG	1 cut(s)	170
SacI	GAGCTC	1 cut(s)	38
SalI	GTCGAC	1 cut(s)	26
SaqAI	TTAA	4 cut(s)	317, 921, 1031, 1136
SatI	GCNGC	5 cut(s)	150, 153, 621, 675, 998
Sau3AI	GATC	4 cut(s)	174, 679, 882, 1042
Sau96I	GGNCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
SchI	GAGTC	2 cut(s)	935, 985
ScrFI	CCNGG	4 cut(s)	105, 636, 731, 1038
SduI	GDGCHC	1 cut(s)	38
SfaNI	GCATC	4 cut(s)	393, 415, 826, 1082
SfcI	CTRYAG	1 cut(s)	624
SinI	GGWCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
SmlI	CTYRAG	1 cut(s)	1030
SmoI	CTYRAG	1 cut(s)	1030
Sse9I	AATT	9 cut(s)	453, 480, 507, 644, 892, 905, 918, 964, 1154
SseBI	AGGCCT	1 cut(s)	1036
SsiI	CCGC	4 cut(s)	95, 150, 153, 423
SspMI	CTAG	5 cut(s)	558, 599, 720, 818, 1100
SstI	GAGCTC	1 cut(s)	38
StuI	AGGCCT	1 cut(s)	1036
StyD4I	CCNGG	4 cut(s)	103, 634, 729, 1036
StyI	CCWWGG	5 cut(s)	228, 751, 763, 794, 1048
TaaI	ACNGT	2 cut(s)	170, 988
TaiI	ACGT	2 cut(s)	129, 259
TaqI	TCGA	6 cut(s)	21, 27, 100, 401, 535, 810
TaqII	GACCGA	1 cut(s)	620
TasI	AATT	9 cut(s)	453, 480, 507, 644, 892, 905, 918, 964, 1154
TauI	GCSGC	2 cut(s)	152, 155
TfiI	GAWTC	3 cut(s)	334, 1082, 1243
Tru1I	TTAA	4 cut(s)	317, 921, 1031, 1136
Tru9I	TTAA	4 cut(s)	317, 921, 1031, 1136
TscAI	CASTG	3 cut(s)	336, 597, 993
TseFI	GTSAC	3 cut(s)	802, 952, 988
TseI	GCWGC	3 cut(s)	620, 674, 997
Tsp45I	GTSAC	3 cut(s)	802, 952, 988
TspDTI	ATGAA	8 cut(s)	7, 188, 270, 324, 387, 657, 719, 1188
TspGWI	ACGGA	2 cut(s)	539, 937
TspRI	CASTG	3 cut(s)	336, 597, 993
Van91I	CCANNNNNTGG	1 cut(s)	581
Vha464I	CTTAAG	1 cut(s)	1030
VpaK11BI	GGWCC	9 cut(s)	170, 426, 440, 551, 584, 632, 755, 850, 1070
XapI	RAATTY	1 cut(s)	1154
XbaI	TCTAGA	1 cut(s)	817
XceI	RCATGY	1 cut(s)	1233
XmiI	GTMKAC	1 cut(s)	27
XmnI	GAANNNNTTC	2 cut(s)	218, 744
XspI	CTAG	5 cut(s)	558, 599, 720, 818, 1100
Zsp2I	ATGCAT	1 cut(s)	408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.