Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0003811

Physical Location & Seq

Genomic Coordinates Forward (+)

23194080 .. 23197400

Gene Structure 3321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG242500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAAGCGCCGCCCTCCGAGCAACACCTTGTATGACCTTTTTCGTTCCTTCCGAGAAAACAACCCGATTGATGACATCCCCTTACCGAACCTCCCGAGCTCTAACTTCGTTCATGGAAGTCGTCGACATCGGAAAAACTCCGTGTCCGGCGTAGCTCTCACTTCCTTCATCGAAGTCGACCCGAGCTCTCACTTCCCCATACAGAACCTCCCGTTCGGAGTGTTCAAGCCAAAACCGGCTTCAACGGCTCGACCGGGCGTGGCCATCGGCGATTATGTGTTGGACTTGTCAGCAATCGCCGCCGCCGGTCTCTTCAACGGTCCGATCCTCAGAAACTCCGATTGCTTTTATCAGCCTAATTTGAACAAGTTCTTGGCCTTGGGACGACCTGCTTGGAAGGAAGCACGTGCTACACTCCAGAAGCTACTTTCATCTACTGAGCCAACATTGCGTGACAATCAAAGTTTAAAGCAGGAATCACTTATTCCGTTGAGCGAGGTGGAAATGCTGCTTCCTGTGGCGATTGGGGACTTTACAGACTTCTTTTCATCAATGGATCACGTACACGACTGCGGGGCCAAGATTAATTGTAAGGCAGGTCAGGCACTTCCACTGAAATGGTTGGACCTACCAATTGCATATCATGGACGAGCTTCGTCGATTGTTATCTCTGGAACTGACATTACTCGACCCAGGTCAATCAGAGACGTGTCTCTTGAGACATTTTTACGTCCAAGACAACCTCCAGGCGGTCTGCTATATTTTGGTCCCGCAACGAAACTAGATTTTGAGCTTAAAATGGCTGCTGTAGTTGGTCCTGGAAATGAATTAGGGAATCCGGTGGATGTGAATGAGGCAGCAGATCACATTTTTGGACTTGTCTTGATGAATGGCTGGATTGCTAGAGATATCCAGGCAAAGGAATTTATTCCCAGTGTGCCTTTCCTAGGAAAAAGTTTTGGAACTACGATATCCCCTTGGATAGTGACACTCGAAGCTCTAGAACCATTTTCCTGTGATCCTCCCAAAAAGCACCCCCATCTAATGCCCTATGTCGCTGAAAATATCTCCGAAAGCTATGACATAACATTAGAGGTTCGAATTAAACCAGCTGGAGAGAGGCGCTCATCTGTGGTCACAAAGAGTAATTTCAACCACTTAATTTGGACATTGCCTCAGCAGCTAGCACACCTTACCGTCAATGGGTGCAACTTAAGGCCTGGAGATCTCTTTGGAACTGGGACCATCAGTGGACCTGAGCCAGAATCTTACGGAAGCTTGCTAGAGCTGACATGGGATAAGCCGTTGTCATTAAACGGCGTTACTCGTGAATTTCTTGAAGATGGAGACGAAGTCATCATTACTGGTTTTAGCAAGGGAAACGGCTACAAAGTAGGGTTCGGGAAATGCTCTGGAAAGATTGTTCCACCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004334 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016787 GO:0016822 GO:0016823 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0071704 GO:0072329 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

FAA_hydrolase FAA_hydrolase_N

Protein Analysis

478

Amino Acids

52.42

Weight (kDa)

6.84

Isoelectric Point (pI)

42.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAA_hydrolase_N	PF09298	68 - 172	1.8e-35	Fumarylacetoacetase N-terminal
FAA_hydrolase	PF01557	185 - 456	1.8e-32	Fumarylacetoacetate (FAA) hydrolase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12050
fragaria_vesca	FvH4_3g01030
malus_domestica	MD10G1331100.v1.1
prunus_persica	Prupe.4G011100_v2.0.a1
pyrus_communis	pycom10g28060
rosa_chinensis	RchiOBHm_Chr3g0477951 RchiOBHm_Chr3g0484131 RchiOBHm_Chr5g0001571 RchiOBHm_Chr5g0003621
rosa_laevigata	RLG00000030938 RLG00000030942
rosa_multiflora	Rmu_co8093718.1_g000001 Rmu_sc0003749.1_g000003 Rmu_sc0005991.1_g000008 Rmu_sc0006320.1_g000011 Rmu_sc0029518.1_g000002 Rmu_sc0040965.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074840
rosa_rugosa	Rorug02G0302800 Rorug03G0164100 Rorug04G0391100
rosa_samantha	Rh3AG214900 Rh3AG258900 Rh3BG248500 Rh3CG242500 Rh3DG241900 Rh5AG012300 Rh5BG014900 Rh5BG015100 Rh5CG013300 Rh5DG012600 Rh5DG012700
rosa_wichuraiana	Rw3G019370 Rw5G001170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	397, 587
AccI	GTMKAC	2 cut(s)	124, 177
AciI	CCGC	6 cut(s)	10, 300, 303, 573, 750, 771
AclWI	GGATC	3 cut(s)	319, 564, 1013
AcoI	YGGCCR	1 cut(s)	261
AcsI	RAATTY	2 cut(s)	923, 1331
AcvI	CACGTG	1 cut(s)	407
AfaI	GTAC	1 cut(s)	564
AfiI	CCNNNNNNNGG	4 cut(s)	749, 919, 947, 1203
AflII	CTTAAG	1 cut(s)	1213
AflIII	ACRYGT	1 cut(s)	708
AgsI	TTSAA	6 cut(s)	226, 243, 316, 364, 1153, 1340
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	5 cut(s)	692, 745, 817, 912, 1219
AjuI	GAANNNNNNNTTGG	4 cut(s)	223, 255, 356, 388
AloI	GAACNNNNNNTCC	1 cut(s)	1407
Alw21I	GWGCWC	2 cut(s)	101, 188
Alw26I	GTCTC	5 cut(s)	314, 699, 713, 717, 1341
AlwI	GGATC	3 cut(s)	319, 564, 1013
Ama87I	CYCGRG	2 cut(s)	94, 181
AoxI	GGCC	4 cut(s)	261, 375, 576, 1217
ApeKI	GCWGC	4 cut(s)	508, 803, 857, 1180
ApoI	RAATTY	2 cut(s)	923, 1331
AseI	ATTAAT	1 cut(s)	585
Asp700I	GAANNNNTTC	2 cut(s)	368, 927
AspA2I	CCTAGG	1 cut(s)	946
AspLEI	GCGC	2 cut(s)	9, 1125
AspS9I	GGNCC	7 cut(s)	320, 576, 625, 767, 815, 1242, 1253
AsuC2I	CCSGG	1 cut(s)	255
AsuII	TTCGAA	1 cut(s)	1099
AsuNHI	GCTAGC	1 cut(s)	1183
AvaI	CYCGRG	2 cut(s)	94, 181
AvaII	GGWCC	6 cut(s)	320, 625, 767, 815, 1242, 1253
AvrII	CCTAGG	1 cut(s)	946
BalI	TGGCCA	1 cut(s)	263
BanII	GRGCYC	2 cut(s)	101, 188
BauI	CACGAG	1 cut(s)	1326
BbrPI	CACGTG	1 cut(s)	407
Bbv12I	GWGCWC	2 cut(s)	101, 188
BbvCI	CCTCAGC	1 cut(s)	1176
BbvI	GCAGC	4 cut(s)	495, 790, 869, 1192
BccI	CCATC	4 cut(s)	272, 1047, 1253, 1337
BceAI	ACGGC	4 cut(s)	261, 1288, 1333, 1399
BciT130I	CCWGG	5 cut(s)	694, 747, 819, 914, 1221
BcnI	CCSGG	1 cut(s)	255
BcoDI	GTCTC	5 cut(s)	314, 699, 713, 717, 1341
BfaI	CTAG	6 cut(s)	782, 903, 947, 1001, 1184, 1283
BfmI	CTRYAG	1 cut(s)	807
BfoI	RGCGCY	2 cut(s)	10, 1126
BfrI	CTTAAG	1 cut(s)	1213
BfuAI	ACCTGC	2 cut(s)	397, 587
BglII	AGATCT	1 cut(s)	1225
BisI	GCNGC	7 cut(s)	10, 300, 303, 509, 804, 858, 1181
BlnI	CCTAGG	1 cut(s)	946
BlsI	GCNGC	7 cut(s)	11, 301, 304, 510, 805, 859, 1182
Bme1390I	CCNGG	6 cut(s)	255, 694, 747, 819, 914, 1221
Bme18I	GGWCC	6 cut(s)	320, 625, 767, 815, 1242, 1253
BmeT110I	CYCGRG	2 cut(s)	94, 181
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	7 cut(s)	320, 576, 625, 767, 815, 1242, 1253
BmiI	GGNNCC	3 cut(s)	577, 769, 1243
BmrFI	CCNGG	6 cut(s)	255, 694, 747, 819, 914, 1221
BmrI	ACTGGG	2 cut(s)	927, 1248
BmtI	GCTAGC	1 cut(s)	1187
BmuI	ACTGGG	2 cut(s)	927, 1248
BoxI	GACNNNNGTC	1 cut(s)	694
BplI	GAGNNNNNCTC	2 cut(s)	1109, 1141
BpmI	CTGGAG	4 cut(s)	401, 729, 1134, 1242
Bpu10I	CCTNAGC	2 cut(s)	1176, 1257
Bpu14I	TTCGAA	1 cut(s)	1099
BpuEI	CTTGAG	1 cut(s)	737
BpuMI	CCSGG	1 cut(s)	255
BsaAI	YACGTR	2 cut(s)	407, 562
BsaBI	GATNNNNATC	1 cut(s)	665
BsaI	GGTCTC	1 cut(s)	314
BsaJI	CCNNGG	4 cut(s)	378, 692, 946, 977
BsaWI	WCCGGW	1 cut(s)	838
BsaXI	ACNNNNNCTCC	6 cut(s)	75, 105, 192, 222, 1338, 1368
Bsc4I	CCNNNNNNNGG	4 cut(s)	749, 919, 947, 1203
Bse118I	RCCGGY	2 cut(s)	235, 305
Bse1I	ACTGG	3 cut(s)	933, 1243, 1369
Bse3DI	GCAATG	2 cut(s)	446, 1169
Bse8I	GATNNNNATC	1 cut(s)	665
BseBI	CCWGG	5 cut(s)	694, 747, 819, 914, 1221
BseDI	CCNNGG	4 cut(s)	378, 692, 946, 977
BseGI	GGATG	2 cut(s)	75, 850
BseJI	GATNNNNATC	1 cut(s)	665
BseLI	CCNNNNNNNGG	4 cut(s)	749, 919, 947, 1203
BseMI	GCAATG	2 cut(s)	446, 1169
BseMII	CTCAG	4 cut(s)	343, 429, 1190, 1248
BseNI	ACTGG	3 cut(s)	933, 1243, 1369
BseXI	GCAGC	4 cut(s)	495, 790, 869, 1192
Bsh1285I	CGRYCG	1 cut(s)	254
BshFI	GGCC	4 cut(s)	263, 377, 578, 1219
BsiEI	CGRYCG	1 cut(s)	254
BsiHKAI	GWGCWC	2 cut(s)	101, 188
BsiHKCI	CYCGRG	2 cut(s)	94, 181
BsiSI	CCGG	5 cut(s)	147, 236, 254, 306, 839
BslFI	GGGAC	4 cut(s)	396, 542, 753, 1255
BslI	CCNNNNNNNGG	4 cut(s)	749, 919, 947, 1203
BsmAI	GTCTC	5 cut(s)	314, 699, 713, 717, 1341
BsmBI	CGTCTC	2 cut(s)	699, 1341
BsmFI	GGGAC	4 cut(s)	396, 542, 753, 1255
BsnI	GGCC	4 cut(s)	263, 377, 578, 1219
Bso31I	GGTCTC	1 cut(s)	314
BsoBI	CYCGRG	2 cut(s)	94, 181
Bsp119I	TTCGAA	1 cut(s)	1099
Bsp1286I	GDGCHC	2 cut(s)	101, 188
Bsp143I	GATC	5 cut(s)	324, 556, 862, 1018, 1225
BspACI	CCGC	6 cut(s)	10, 300, 303, 573, 750, 771
BspANI	GGCC	4 cut(s)	263, 377, 578, 1219
BspCNI	CTCAG	4 cut(s)	342, 430, 1189, 1249
BspLI	GGNNCC	3 cut(s)	577, 769, 1243
BspMI	ACCTGC	2 cut(s)	397, 587
BspOI	GCTAGC	1 cut(s)	1187
BspPI	GGATC	3 cut(s)	319, 564, 1013
BspT104I	TTCGAA	1 cut(s)	1099
BspTI	CTTAAG	1 cut(s)	1213
BspTNI	GGTCTC	1 cut(s)	314
BsrDI	GCAATG	2 cut(s)	446, 1169
BsrFI	RCCGGY	2 cut(s)	235, 305
BsrI	ACTGG	3 cut(s)	933, 1243, 1369
BssAI	RCCGGY	2 cut(s)	235, 305
BssECI	CCNNGG	4 cut(s)	378, 692, 946, 977
BssMI	GATC	5 cut(s)	324, 556, 862, 1018, 1225
BssSI	CACGAG	1 cut(s)	1326
BssT1I	CCWWGG	3 cut(s)	378, 946, 977
Bst2BI	CACGAG	1 cut(s)	1326
Bst2UI	CCWGG	5 cut(s)	694, 747, 819, 914, 1221
Bst4CI	ACNGT	2 cut(s)	320, 1198
Bst6I	CTCTTC	1 cut(s)	317
BstAFI	CTTAAG	1 cut(s)	1213
BstBAI	YACGTR	2 cut(s)	407, 562
BstBI	TTCGAA	1 cut(s)	1099
BstC8I	GCNNGC	2 cut(s)	1185, 1280
BstDEI	CTNAG	4 cut(s)	329, 438, 1176, 1257
BstENI	CCTNNNNNAGG	1 cut(s)	945
BstF5I	GGATG	2 cut(s)	75, 850
BstH2I	RGCGCY	2 cut(s)	10, 1126
BstHHI	GCGC	2 cut(s)	9, 1125
BstKTI	GATC	5 cut(s)	327, 559, 865, 1021, 1228
BstMAI	GTCTC	5 cut(s)	314, 699, 713, 717, 1341
BstMBI	GATC	5 cut(s)	324, 556, 862, 1018, 1225
BstMCI	CGRYCG	1 cut(s)	254
BstMWI	GCNNNNNNNGC	6 cut(s)	18, 245, 299, 448, 602, 1180
BstNI	CCWGG	5 cut(s)	694, 747, 819, 914, 1221
BstPAI	GACNNNNGTC	1 cut(s)	694
BstSCI	CCNGG	6 cut(s)	253, 692, 745, 817, 912, 1219
BstSFI	CTRYAG	1 cut(s)	807
BstV1I	GCAGC	4 cut(s)	495, 790, 869, 1192
BstX2I	RGATCY	1 cut(s)	1225
BstXI	CCANNNNNNTGG	1 cut(s)	618
BstYI	RGATCY	1 cut(s)	1225
BsuRI	GGCC	4 cut(s)	263, 377, 578, 1219
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	2 cut(s)	75, 850
BtsIMutI	CAGTG	3 cut(s)	611, 940, 1255
BveI	ACCTGC	2 cut(s)	397, 587
Cac8I	GCNNGC	2 cut(s)	1185, 1280
CfoI	GCGC	2 cut(s)	9, 1125
Cfr10I	RCCGGY	2 cut(s)	235, 305
Cfr13I	GGNCC	7 cut(s)	320, 576, 625, 767, 815, 1242, 1253
CpoI	CGGWCCG	1 cut(s)	320
Csp6I	GTAC	1 cut(s)	563
CspCI	CAANNNNNGTGG	2 cut(s)	1145, 1180
CspI	CGGWCCG	1 cut(s)	320
CviAII	CATG	3 cut(s)	113, 644, 1293
CviQI	GTAC	1 cut(s)	563
DdeI	CTNAG	4 cut(s)	329, 438, 1176, 1257
DpnI	GATC	5 cut(s)	326, 558, 864, 1020, 1227
DpnII	GATC	5 cut(s)	324, 556, 862, 1018, 1225
DraI	TTTAAA	1 cut(s)	468
EaeI	YGGCCR	1 cut(s)	261
Eam1104I	CTCTTC	1 cut(s)	317
EarI	CTCTTC	1 cut(s)	317
Ecl136II	GAGCTC	2 cut(s)	99, 186
Eco130I	CCWWGG	3 cut(s)	378, 946, 977
Eco147I	AGGCCT	1 cut(s)	1219
Eco24I	GRGCYC	2 cut(s)	101, 188
Eco31I	GGTCTC	1 cut(s)	314
Eco32I	GATATC	2 cut(s)	910, 972
Eco47I	GGWCC	6 cut(s)	320, 625, 767, 815, 1242, 1253
Eco53kI	GAGCTC	2 cut(s)	99, 186
Eco72I	CACGTG	1 cut(s)	407
Eco88I	CYCGRG	2 cut(s)	94, 181
EcoICRI	GAGCTC	2 cut(s)	99, 186
EcoNI	CCTNNNNNAGG	1 cut(s)	945
EcoRII	CCWGG	5 cut(s)	692, 745, 817, 912, 1219
EcoRV	GATATC	2 cut(s)	910, 972
EcoT14I	CCWWGG	3 cut(s)	378, 946, 977
EcoT38I	GRGCYC	2 cut(s)	101, 188
ErhI	CCWWGG	3 cut(s)	378, 946, 977
Esp3I	CGTCTC	2 cut(s)	699, 1341
FaeI	CATG	3 cut(s)	116, 647, 1296
FaqI	GGGAC	4 cut(s)	396, 542, 753, 1255
FatI	CATG	3 cut(s)	112, 643, 1292
FauI	CCCGC	2 cut(s)	566, 778
FblI	GTMKAC	2 cut(s)	124, 177
Fnu4HI	GCNGC	7 cut(s)	10, 300, 303, 509, 804, 858, 1181
FokI	GGATG	2 cut(s)	62, 857
FriOI	GRGCYC	2 cut(s)	101, 188
Fsp4HI	GCNGC	7 cut(s)	10, 300, 303, 509, 804, 858, 1181
FspBI	CTAG	6 cut(s)	782, 903, 947, 1001, 1184, 1283
GlaI	GCGC	2 cut(s)	8, 1124
GluI	GCNGC	7 cut(s)	10, 300, 303, 509, 804, 858, 1181
GsuI	CTGGAG	4 cut(s)	401, 729, 1134, 1242
HaeII	RGCGCY	2 cut(s)	10, 1126
HaeIII	GGCC	4 cut(s)	263, 377, 578, 1219
HapII	CCGG	5 cut(s)	147, 236, 254, 306, 839
HhaI	GCGC	2 cut(s)	9, 1125
Hin1II	CATG	3 cut(s)	116, 647, 1296
Hin6I	GCGC	2 cut(s)	7, 1123
HinP1I	GCGC	2 cut(s)	7, 1123
HincII	GTYRAC	2 cut(s)	125, 178
HindII	GTYRAC	2 cut(s)	125, 178
HindIII	AAGCTT	1 cut(s)	1276
HinfI	GANTC	3 cut(s)	476, 835, 1265
HpaII	CCGG	5 cut(s)	147, 236, 254, 306, 839
Hpy166II	GTNNAC	4 cut(s)	125, 178, 565, 1253
Hpy188I	TCNGA	9 cut(s)	18, 53, 132, 218, 324, 332, 340, 704, 1072
Hpy8I	GTNNAC	4 cut(s)	125, 178, 565, 1253
Hpy99I	CGWCG	2 cut(s)	126, 661
HpyAV	CCTTC	3 cut(s)	58, 175, 391
HpyCH4III	ACNGT	2 cut(s)	320, 1198
HpyCH4IV	ACGT	4 cut(s)	406, 561, 708, 730
HpyCH4V	TGCA	2 cut(s)	638, 1209
HpyF10VI	GCNNNNNNNGC	6 cut(s)	18, 245, 299, 448, 602, 1180
HpyF3I	CTNAG	4 cut(s)	329, 438, 1176, 1257
HpySE526I	ACGT	4 cut(s)	406, 561, 708, 730
Hsp92II	CATG	3 cut(s)	116, 647, 1296
HspAI	GCGC	2 cut(s)	7, 1123
Kzo9I	GATC	5 cut(s)	324, 556, 862, 1018, 1225
Lsp1109I	GCAGC	4 cut(s)	495, 790, 869, 1192
MaeI	CTAG	6 cut(s)	782, 903, 947, 1001, 1184, 1283
MaeII	ACGT	4 cut(s)	406, 561, 708, 730
MaeIII	GTNAC	4 cut(s)	452, 985, 1135, 1321
MalI	GATC	5 cut(s)	326, 558, 864, 1020, 1227
MboI	GATC	5 cut(s)	324, 556, 862, 1018, 1225
MboII	GAAGA	2 cut(s)	304, 1352
MfeI	CAATTG	1 cut(s)	633
MflI	RGATCY	1 cut(s)	1225
MhlI	GDGCHC	2 cut(s)	101, 188
MlsI	TGGCCA	1 cut(s)	263
MluCI	AATT	9 cut(s)	358, 586, 633, 827, 923, 1101, 1147, 1161, 1331
MluNI	TGGCCA	1 cut(s)	263
MmeI	TCCRAC	2 cut(s)	261, 603
Mox20I	TGGCCA	1 cut(s)	263
MroXI	GAANNNNTTC	2 cut(s)	368, 927
MscI	TGGCCA	1 cut(s)	263
MseI	TTAA	7 cut(s)	467, 585, 795, 1104, 1160, 1214, 1313
MslI	CAYNNNNRTG	1 cut(s)	616
Msp20I	TGGCCA	1 cut(s)	263
MspA1I	CMGCKG	1 cut(s)	1112
MspCI	CTTAAG	1 cut(s)	1213
MspI	CCGG	5 cut(s)	147, 236, 254, 306, 839
MspR9I	CCNGG	6 cut(s)	255, 694, 747, 819, 914, 1221
MunI	CAATTG	1 cut(s)	633
MvaI	CCWGG	5 cut(s)	694, 747, 819, 914, 1221
MwoI	GCNNNNNNNGC	6 cut(s)	18, 245, 299, 448, 602, 1180
NciI	CCSGG	1 cut(s)	255
NdeII	GATC	5 cut(s)	324, 556, 862, 1018, 1225
NheI	GCTAGC	1 cut(s)	1183
NlaIII	CATG	3 cut(s)	116, 647, 1296
NlaIV	GGNNCC	3 cut(s)	577, 769, 1243
NmuCI	GTSAC	3 cut(s)	452, 985, 1135
NspV	TTCGAA	1 cut(s)	1099
PceI	AGGCCT	1 cut(s)	1219
PcsI	WCGNNNNNNNCGW	1 cut(s)	49
PdmI	GAANNNNTTC	2 cut(s)	368, 927
PfeI	GAWTC	3 cut(s)	476, 835, 1265
PflFI	GACNNNGTC	1 cut(s)	1352
PfoI	TCCNGGA	1 cut(s)	817
PkrI	GCNGC	7 cut(s)	11, 301, 304, 510, 805, 859, 1182
PmaCI	CACGTG	1 cut(s)	407
PmlI	CACGTG	1 cut(s)	407
Ppu21I	YACGTR	2 cut(s)	407, 562
PshAI	GACNNNNGTC	1 cut(s)	694
PshBI	ATTAAT	1 cut(s)	585
Psp124BI	GAGCTC	2 cut(s)	101, 188
Psp6I	CCWGG	5 cut(s)	692, 745, 817, 912, 1219
PspCI	CACGTG	1 cut(s)	407
PspGI	CCWGG	5 cut(s)	692, 745, 817, 912, 1219
PspN4I	GGNNCC	3 cut(s)	577, 769, 1243
PspPI	GGNCC	7 cut(s)	320, 576, 625, 767, 815, 1242, 1253
PsrI	GAACNNNNNNTAC	2 cut(s)	667, 699
PsuI	RGATCY	1 cut(s)	1225
PsyI	GACNNNGTC	1 cut(s)	1352
PvuII	CAGCTG	1 cut(s)	1112
RsaI	GTAC	1 cut(s)	564
RsaNI	GTAC	1 cut(s)	563
RseI	CAYNNNNRTG	1 cut(s)	616
Rsr2I	CGGWCCG	1 cut(s)	320
RsrII	CGGWCCG	1 cut(s)	320
SacI	GAGCTC	2 cut(s)	101, 188
SalI	GTCGAC	2 cut(s)	123, 176
SaqAI	TTAA	7 cut(s)	467, 585, 795, 1104, 1160, 1214, 1313
SatI	GCNGC	7 cut(s)	10, 300, 303, 509, 804, 858, 1181
Sau3AI	GATC	5 cut(s)	324, 556, 862, 1018, 1225
Sau96I	GGNCC	7 cut(s)	320, 576, 625, 767, 815, 1242, 1253
ScrFI	CCNGG	6 cut(s)	255, 694, 747, 819, 914, 1221
SduI	GDGCHC	2 cut(s)	101, 188
SfcI	CTRYAG	1 cut(s)	807
SfuI	TTCGAA	1 cut(s)	1099
SinI	GGWCC	6 cut(s)	320, 625, 767, 815, 1242, 1253
SmiMI	CAYNNNNRTG	1 cut(s)	616
SmlI	CTYRAG	2 cut(s)	716, 1213
SmoI	CTYRAG	2 cut(s)	716, 1213
Sse9I	AATT	9 cut(s)	358, 586, 633, 827, 923, 1101, 1147, 1161, 1331
SseBI	AGGCCT	1 cut(s)	1219
SsiI	CCGC	6 cut(s)	10, 300, 303, 573, 750, 771
SspMI	CTAG	6 cut(s)	782, 903, 947, 1001, 1184, 1283
SstI	GAGCTC	2 cut(s)	101, 188
StuI	AGGCCT	1 cut(s)	1219
StyD4I	CCNGG	6 cut(s)	253, 692, 745, 817, 912, 1219
StyI	CCWWGG	3 cut(s)	378, 946, 977
TaaI	ACNGT	2 cut(s)	320, 1198
TaiI	ACGT	4 cut(s)	409, 564, 711, 733
TaqI	TCGA	8 cut(s)	124, 171, 177, 250, 659, 688, 993, 1099
TasI	AATT	9 cut(s)	358, 586, 633, 827, 923, 1101, 1147, 1161, 1331
TauI	GCSGC	3 cut(s)	12, 302, 305
TfiI	GAWTC	3 cut(s)	476, 835, 1265
Tru1I	TTAA	7 cut(s)	467, 585, 795, 1104, 1160, 1214, 1313
Tru9I	TTAA	7 cut(s)	467, 585, 795, 1104, 1160, 1214, 1313
TscAI	CASTG	3 cut(s)	618, 940, 1255
TseFI	GTSAC	3 cut(s)	452, 985, 1135
TseI	GCWGC	4 cut(s)	508, 803, 857, 1180
Tsp45I	GTSAC	3 cut(s)	452, 985, 1135
TspDTI	ATGAA	7 cut(s)	17, 101, 157, 420, 537, 840, 902
TspGWI	ACGGA	3 cut(s)	130, 477, 1287
TspRI	CASTG	3 cut(s)	618, 940, 1255
Tth111I	GACNNNGTC	1 cut(s)	1352
Vha464I	CTTAAG	1 cut(s)	1213
VpaK11BI	GGWCC	6 cut(s)	320, 625, 767, 815, 1242, 1253
VspI	ATTAAT	1 cut(s)	585
XagI	CCTNNNNNAGG	1 cut(s)	945
XapI	RAATTY	2 cut(s)	923, 1331
XbaI	TCTAGA	1 cut(s)	1000
XmaJI	CCTAGG	1 cut(s)	946
XmiI	GTMKAC	2 cut(s)	124, 177
XmnI	GAANNNNTTC	2 cut(s)	368, 927
XspI	CTAG	6 cut(s)	782, 903, 947, 1001, 1184, 1283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.