Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003811

Physical Location & Seq

Genomic Coordinates Forward (+)

33810187 .. 33817600

Gene Structure 7414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0302800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGGAAGGAGATGTAGGATTTGGTGGCCGAAGCAGCTCTCATTCCCCAAATCAGACTCTAATTTCTTGCTCGGCTGGTTTGTTTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCGACGTCGTCATAGCTTTCGCCTGCACCCAACTCGCGTTTTCCGATCCCACAAAAAGCCTCCAGGGAATTCTTCATGAAACAAATGGAAAGATGCCCGTATTGCTTCAGGATAGGTCAAAGTTGTGTGTTCTGGGTCAGTTTGCTTCAGTTGGAACTGAACAAGATGATCATTATCAGTCATCTTCTTGTGGATGCCACAAGCTCAGTGGATCGTTAGAACAATGCAGGCAATCTTTTGTGGCAGACAGTTTTTGGATCCACATGTTACGTGAGGATCAACAACAATTTGGGAAAGGCATTACTTGGATTCCTAGAATGCAGCACATTCATTGGAATGGGGAGATAGTGTCTCGATGTCATGTCCACCTGATATTCTATGAGACTCCCACCTACGGAGCTCACCATTTCTCATTACGGATTTGGAATTCTTTGGACCAAGCCAAGGCTCCTCTGAGAAAACCCAAGTGGGTTCATGAACTCAACCAAAAGCAGCCACTTCTTGATTTGGATACAGTCATTCTGGCAATTAATAGCGCCTCTGCTGCTGACAATTCTTTCAAAAGATGCTTGGGTGCCAAGAAATCTTTTGTTCGCTTTTCCATTGTTTACATGTTTCTTGGCTTCATATGGAAGCTATTTTCTCTGCTTGTAGCTTCATTATCCACTTTATTCTACGTCATTCTTCAGTTTCTGTATACGCTTCTGAATTATGCATCAGACTCTTGGACATACATTATATTAGTAAAGGTATTCAGCAGTGCAAGGATAAATATGAGAATCCGTTTTTCTCAGATGTTGTATTGGCCAATCTTTCTTCAAGATAATAGCATGAGGTCTCAATCAAGTGTAGAATATGCAGAGAAAGCCGCATTGCTTAAGCATTCCATGTGGTCAAGTTTAGCTGTCGATGTTCTTTTGGGAAACTTGATTGGTTTGGCACTGTTGTATCATGCAGAATCTGCTTGCATATTGGTTCTCAAATTTTCCAGTGACGTTACCAATGAGTTGTTGCGCTCTGGTTGTGTGTGGTTGATGGGAGTCCCTGCAGGTTTCAAGTTAAACACGGAATTAGCAGGAGTTCTTGGGATGATTTCTCTAACTGCTATCCAGATTTGGTCTACCATTTGGATCTTTTTGGGTTTTCACTTTCTTTATGTCATTAGAGGACTTGCCATATCCGGGATCATTTTTGGGTTAACTATACCTGCTGCTTTGATCATAGACTTGATTGCACTAGTAACATTACATGTGTCTACTCTTCATTGGTTGATATCTCTTTTGTATTCAACTCAGATACAGGCATTAGCAGCTTTGTGGCGCCTTTTCAGGGGTCGAAAGTGGAATCCTCTTCGTCAGAGATTAGATAGTTATGACTACACTGTCAAGCAGCACATAGTTGGATCTCTTCTGTTCACACCACTCTTGCTTCTGTTGCCCACGACTTCTGTTTTCTATATCTTCTTTACCATTATGAACACAACCATCAGCTTAATCTGTATACTGATTGAAGTCACTATATCAGTTATTCATGCGACTCCATATATCAAAGTTTTCCTGTGGTTGGTCAGGCCAAGAAGATTCCCTTCTGGGATATGGTTTGAAATCAAATCTGTTTGGAGTCAGGGCCTTGATTCTTGTGAGGATATGGATTCACCGGTAGCTAATATGCAGGGTAAAAACGACAGAACCGAAGAAAAACCTTCTGTTGTGGTTTCGTTTCTTCATAGCAACTTCTTGACTGTAGGACAAATAATTTTGCCTCACTACACTAAGGTTCTTTCTGGGAAACCTCGAACCTTGGTCGCTACAGCAGCATATGGAGTTCTCACTGGCAGAAGGATTCCATCAACAATTGGAACTGATCTCCCAACATTTCCATGGATGATAATTCCCTGCAAAGAGTTTTGGCGCCTCTGCTACGATTCAATTCTTGAATGCTACAGAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004334 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016787 GO:0016822 GO:0016823 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0071704 GO:0072329 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

FAA_hydrolase FAA_hydrolase_N

Protein Analysis

689

Amino Acids

78.29

Weight (kDa)

9.2

Isoelectric Point (pI)

44.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gpi1	PF05024	297 - 568	8.6e-79	N-acetylglucosaminyl transferase component (Gpi1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12050
fragaria_vesca	FvH4_3g01030
malus_domestica	MD10G1331100.v1.1
prunus_persica	Prupe.4G011100_v2.0.a1
pyrus_communis	pycom10g28060
rosa_chinensis	RchiOBHm_Chr3g0477951 RchiOBHm_Chr3g0484131 RchiOBHm_Chr5g0001571 RchiOBHm_Chr5g0003621
rosa_laevigata	RLG00000030938 RLG00000030942
rosa_multiflora	Rmu_co8093718.1_g000001 Rmu_sc0003749.1_g000003 Rmu_sc0005991.1_g000008 Rmu_sc0006320.1_g000011 Rmu_sc0029518.1_g000002 Rmu_sc0040965.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074840
rosa_rugosa	Rorug02G0302800 Rorug03G0164100 Rorug04G0391100
rosa_samantha	Rh3AG214900 Rh3AG258900 Rh3BG248500 Rh3CG242500 Rh3DG241900 Rh5AG012300 Rh5BG014900 Rh5BG015100 Rh5CG013300 Rh5DG012600 Rh5DG012700
rosa_wichuraiana	Rw3G019370 Rw5G001170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1499
AatII	GACGTC	1 cut(s)	126
Acc36I	ACCTGC	2 cut(s)	1157, 1333
AccB1I	GGYRCC	3 cut(s)	692, 1437, 2028
AccI	GTMKAC	4 cut(s)	815, 1238, 1373, 1618
AccII	CGCG	1 cut(s)	155
AciI	CCGC	1 cut(s)	987
AclWI	GGATC	8 cut(s)	158, 337, 370, 383, 402, 1256, 1310, 1528
AcoI	YGGCCR	2 cut(s)	26, 923
AcsI	RAATTY	3 cut(s)	186, 544, 1100
AcuI	CTGAAG	3 cut(s)	209, 249, 788
AcyI	GRCGYC	3 cut(s)	123, 1438, 2029
AfiI	CCNNNNNNNGG	5 cut(s)	512, 562, 1299, 1447, 1681
AflII	CTTAAG	1 cut(s)	995
AflIII	ACRYGT	3 cut(s)	381, 729, 1366
AgeI	ACCGGT	1 cut(s)	1774
AgsI	TTSAA	8 cut(s)	679, 938, 1174, 1407, 1628, 1721, 2046, 2054
AhlI	ACTAGT	1 cut(s)	1354
AjnI	CCWGG	1 cut(s)	180
Alw21I	GWGCWC	1 cut(s)	520
Alw26I	GTCTC	3 cut(s)	474, 494, 960
AlwI	GGATC	8 cut(s)	158, 337, 370, 383, 402, 1256, 1310, 1528
AlwNI	CAGNNNCTG	2 cut(s)	811, 1079
AoxI	GGCC	4 cut(s)	26, 923, 1688, 1744
ApeKI	GCWGC	8 cut(s)	34, 439, 610, 662, 1328, 1427, 1507, 1931
ApoI	RAATTY	3 cut(s)	186, 544, 1100
AseI	ATTAAT	1 cut(s)	648
AsiGI	ACCGGT	1 cut(s)	1774
AspLEI	GCGC	4 cut(s)	656, 1134, 1440, 2031
AspS9I	GGNCC	2 cut(s)	553, 1744
AsuC2I	CCSGG	1 cut(s)	1300
AsuHPI	GGTGA	2 cut(s)	512, 1764
AvaII	GGWCC	1 cut(s)	553
BaeI	ACNNNNGTAYC	2 cut(s)	1049, 1082
BalI	TGGCCA	1 cut(s)	925
BamHI	GGATCC	1 cut(s)	375
BanI	GGYRCC	3 cut(s)	692, 1437, 2028
BanII	GRGCYC	1 cut(s)	520
Bbv12I	GWGCWC	1 cut(s)	520
BbvI	GCAGC	8 cut(s)	46, 451, 622, 649, 1315, 1439, 1519, 1943
BccI	CCATC	3 cut(s)	1147, 1610, 1972
BcgI	CGANNNNNNTGC	2 cut(s)	133, 167
BciT130I	CCWGG	1 cut(s)	182
BciVI	GTATCC	1 cut(s)	622
BclI	TGATCA	2 cut(s)	286, 1335
BcnI	CCSGG	1 cut(s)	1300
BcoDI	GTCTC	3 cut(s)	474, 494, 960
BcuI	ACTAGT	1 cut(s)	1354
BfaI	CTAG	2 cut(s)	432, 1355
BfmI	CTRYAG	4 cut(s)	1164, 1860, 1926, 2059
BfoI	RGCGCY	3 cut(s)	657, 1441, 2032
BfrI	CTTAAG	1 cut(s)	995
BfuAI	ACCTGC	2 cut(s)	1157, 1333
BfuI	GTATCC	1 cut(s)	622
BisI	GCNGC	9 cut(s)	35, 440, 611, 663, 987, 1329, 1428, 1508, 1932
BlsI	GCNGC	9 cut(s)	36, 441, 612, 664, 988, 1330, 1429, 1509, 1933
Bme1390I	CCNGG	2 cut(s)	182, 1300
Bme18I	GGWCC	1 cut(s)	553
BmgT120I	GGNCC	2 cut(s)	553, 1744
BmiI	GGNNCC	5 cut(s)	377, 567, 694, 1439, 2030
BmrFI	CCNGG	2 cut(s)	182, 1300
BmsI	GCATC	4 cut(s)	201, 302, 674, 842
BpmI	CTGGAG	1 cut(s)	164
BpuMI	CCSGG	1 cut(s)	1300
BsaAI	YACGTR	1 cut(s)	389
BsaBI	GATNNNNATC	1 cut(s)	291
BsaHI	GRCGYC	3 cut(s)	123, 1438, 2029
BsaI	GGTCTC	1 cut(s)	960
BsaJI	CCNNGG	4 cut(s)	181, 561, 1917, 1997
BsaWI	WCCGGW	1 cut(s)	1774
BsaXI	ACNNNNNCTCC	2 cut(s)	452, 482
Bsc4I	CCNNNNNNNGG	5 cut(s)	512, 562, 1299, 1447, 1681
Bse118I	RCCGGY	1 cut(s)	1774
Bse1I	ACTGG	2 cut(s)	1107, 1954
Bse3DI	GCAATG	1 cut(s)	989
Bse8I	GATNNNNATC	1 cut(s)	291
BseBI	CCWGG	1 cut(s)	182
BseDI	CCNNGG	4 cut(s)	181, 561, 1917, 1997
BseGI	GGATG	3 cut(s)	317, 1212, 2007
BseJI	GATNNNNATC	1 cut(s)	291
BseLI	CCNNNNNNNGG	5 cut(s)	512, 562, 1299, 1447, 1681
BseMI	GCAATG	1 cut(s)	989
BseMII	CTCAG	4 cut(s)	337, 563, 923, 1424
BseNI	ACTGG	2 cut(s)	1107, 1954
BseRI	GAGGAG	2 cut(s)	79, 558
BseXI	GCAGC	8 cut(s)	46, 451, 622, 649, 1315, 1439, 1519, 1943
BsgI	GTGCAG	1 cut(s)	127
Bsh1236I	CGCG	1 cut(s)	155
BshFI	GGCC	4 cut(s)	28, 925, 1690, 1746
BshNI	GGYRCC	3 cut(s)	692, 1437, 2028
BshTI	ACCGGT	1 cut(s)	1774
BsiHKAI	GWGCWC	1 cut(s)	520
BsiSI	CCGG	2 cut(s)	1299, 1775
BslFI	GGGAC	1 cut(s)	1145
BslI	CCNNNNNNNGG	5 cut(s)	512, 562, 1299, 1447, 1681
BsmAI	GTCTC	3 cut(s)	474, 494, 960
BsmFI	GGGAC	1 cut(s)	1145
BsmI	GAATGC	3 cut(s)	441, 1000, 2060
BsnI	GGCC	4 cut(s)	28, 925, 1690, 1746
Bso31I	GGTCTC	1 cut(s)	960
Bsp1286I	GDGCHC	1 cut(s)	520
Bsp19I	CCATGG	1 cut(s)	1997
BspACI	CCGC	1 cut(s)	987
BspANI	GGCC	4 cut(s)	28, 925, 1690, 1746
BspCNI	CTCAG	4 cut(s)	336, 564, 922, 1423
BspFNI	CGCG	1 cut(s)	155
BspHI	TCATGA	2 cut(s)	193, 592
BspLI	GGNNCC	5 cut(s)	377, 567, 694, 1439, 2030
BspMAI	CTGCAG	1 cut(s)	1168
BspMI	ACCTGC	2 cut(s)	1157, 1333
BspPI	GGATC	8 cut(s)	158, 337, 370, 383, 402, 1256, 1310, 1528
BspT107I	GGYRCC	3 cut(s)	692, 1437, 2028
BspTI	CTTAAG	1 cut(s)	995
BspTNI	GGTCTC	1 cut(s)	960
BsrDI	GCAATG	1 cut(s)	989
BsrFI	RCCGGY	1 cut(s)	1774
BsrI	ACTGG	2 cut(s)	1107, 1954
BssAI	RCCGGY	1 cut(s)	1774
BssECI	CCNNGG	4 cut(s)	181, 561, 1917, 1997
BssNAI	GTATAC	2 cut(s)	816, 1619
BssNI	GRCGYC	3 cut(s)	123, 1438, 2029
BssT1I	CCWWGG	3 cut(s)	561, 1917, 1997
Bst1107I	GTATAC	2 cut(s)	816, 1619
Bst2UI	CCWGG	1 cut(s)	182
Bst4CI	ACNGT	5 cut(s)	368, 634, 1062, 1501, 1861
Bst6I	CTCTTC	4 cut(s)	97, 1383, 1473, 1530
BstACI	GRCGYC	3 cut(s)	123, 1438, 2029
BstAFI	CTTAAG	1 cut(s)	995
BstAPI	GCANNNNNTGC	1 cut(s)	1079
BstBAI	YACGTR	1 cut(s)	389
BstC8I	GCNNGC	3 cut(s)	142, 347, 1084
BstDEI	CTNAG	5 cut(s)	323, 572, 909, 1410, 1890
BstDSI	CCRYGG	1 cut(s)	1997
BstF5I	GGATG	3 cut(s)	317, 1212, 2007
BstFNI	CGCG	1 cut(s)	155
BstH2I	RGCGCY	3 cut(s)	657, 1441, 2032
BstHHI	GCGC	4 cut(s)	656, 1134, 1440, 2031
BstMAI	GTCTC	3 cut(s)	474, 494, 960
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 220, 662, 983, 1079, 1427, 1552, 1931
BstNI	CCWGG	1 cut(s)	182
BstNSI	RCATGY	3 cut(s)	385, 733, 1370
BstSCI	CCNGG	2 cut(s)	180, 1298
BstSFI	CTRYAG	4 cut(s)	1164, 1860, 1926, 2059
BstUI	CGCG	1 cut(s)	155
BstV1I	GCAGC	8 cut(s)	46, 451, 622, 649, 1315, 1439, 1519, 1943
BstX2I	RGATCY	3 cut(s)	375, 1248, 1520
BstYI	RGATCY	3 cut(s)	375, 1248, 1520
BstZ17I	GTATAC	2 cut(s)	816, 1619
BsuI	GTATCC	1 cut(s)	622
BsuRI	GGCC	4 cut(s)	28, 925, 1690, 1746
BtgI	CCRYGG	1 cut(s)	1997
BtsCI	GGATG	3 cut(s)	317, 1212, 2007
BtsI	GCAGTG	1 cut(s)	883
BtsIMutI	CAGTG	6 cut(s)	331, 883, 1058, 1114, 1497, 1947
BveI	ACCTGC	2 cut(s)	1157, 1333
Cac8I	GCNNGC	3 cut(s)	142, 347, 1084
CaiI	CAGNNNCTG	2 cut(s)	811, 1079
CciI	TCATGA	2 cut(s)	193, 592
CfoI	GCGC	4 cut(s)	656, 1134, 1440, 2031
Cfr10I	RCCGGY	1 cut(s)	1774
Cfr13I	GGNCC	2 cut(s)	553, 1744
CspAI	ACCGGT	1 cut(s)	1774
CspCI	CAANNNNNGTGG	2 cut(s)	307, 342
DdeI	CTNAG	5 cut(s)	323, 572, 909, 1410, 1890
DinI	GGCGCC	2 cut(s)	1439, 2030
DrdI	GACNNNNNNGTC	1 cut(s)	1499
DseDI	GACNNNNNNGTC	1 cut(s)	1499
EaeI	YGGCCR	2 cut(s)	26, 923
Eam1104I	CTCTTC	4 cut(s)	97, 1383, 1473, 1530
EarI	CTCTTC	4 cut(s)	97, 1383, 1473, 1530
Ecl136II	GAGCTC	1 cut(s)	518
Eco130I	CCWWGG	3 cut(s)	561, 1917, 1997
Eco24I	GRGCYC	1 cut(s)	520
Eco31I	GGTCTC	1 cut(s)	960
Eco32I	GATATC	1 cut(s)	1392
Eco47I	GGWCC	1 cut(s)	553
Eco53kI	GAGCTC	1 cut(s)	518
Eco57I	CTGAAG	3 cut(s)	209, 249, 788
EcoICRI	GAGCTC	1 cut(s)	518
EcoO109I	RGGNCCY	1 cut(s)	1744
EcoRI	GAATTC	2 cut(s)	186, 544
EcoRII	CCWGG	1 cut(s)	180
EcoRV	GATATC	1 cut(s)	1392
EcoT14I	CCWWGG	3 cut(s)	561, 1917, 1997
EcoT22I	ATGCAT	1 cut(s)	835
EcoT38I	GRGCYC	1 cut(s)	520
EgeI	GGCGCC	2 cut(s)	1439, 2030
EheI	GGCGCC	2 cut(s)	1439, 2030
ErhI	CCWWGG	3 cut(s)	561, 1917, 1997
FalI	AAGNNNNNCTT	2 cut(s)	1687, 1719
FaqI	GGGAC	1 cut(s)	1145
FauNDI	CATATG	2 cut(s)	746, 1936
FbaI	TGATCA	2 cut(s)	286, 1335
FblI	GTMKAC	4 cut(s)	815, 1238, 1373, 1618
Fnu4HI	GCNGC	9 cut(s)	35, 440, 611, 663, 987, 1329, 1428, 1508, 1932
FokI	GGATG	3 cut(s)	324, 1219, 2014
FriOI	GRGCYC	1 cut(s)	520
Fsp4HI	GCNGC	9 cut(s)	35, 440, 611, 663, 987, 1329, 1428, 1508, 1932
FspBI	CTAG	2 cut(s)	432, 1355
GlaI	GCGC	4 cut(s)	655, 1133, 1439, 2030
GluI	GCNGC	9 cut(s)	35, 440, 611, 663, 987, 1329, 1428, 1508, 1932
GsuI	CTGGAG	1 cut(s)	164
HaeII	RGCGCY	3 cut(s)	657, 1441, 2032
HaeIII	GGCC	4 cut(s)	28, 925, 1690, 1746
HapII	CCGG	2 cut(s)	1299, 1775
HhaI	GCGC	4 cut(s)	656, 1134, 1440, 2031
Hin1I	GRCGYC	3 cut(s)	123, 1438, 2029
Hin6I	GCGC	4 cut(s)	654, 1132, 1438, 2029
HinP1I	GCGC	4 cut(s)	654, 1132, 1438, 2029
HincII	GTYRAC	1 cut(s)	1317
HindII	GTYRAC	1 cut(s)	1317
HpaI	GTTAAC	1 cut(s)	1317
HpaII	CCGG	2 cut(s)	1299, 1775
HphI	GGTGA	2 cut(s)	512, 1764
Hpy166II	GTNNAC	8 cut(s)	484, 727, 816, 1239, 1317, 1374, 1533, 1619
Hpy188I	TCNGA	8 cut(s)	55, 163, 573, 825, 838, 912, 1413, 1476
Hpy8I	GTNNAC	8 cut(s)	484, 727, 816, 1239, 1317, 1374, 1533, 1619
Hpy99I	CGWCG	2 cut(s)	125, 128
HpyAV	CCTTC	3 cut(s)	1713, 1830, 1950
HpyCH4III	ACNGT	5 cut(s)	368, 634, 1062, 1501, 1861
HpyCH4IV	ACGT	5 cut(s)	123, 388, 795, 1113, 2066
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 220, 662, 983, 1079, 1427, 1552, 1931
HpyF3I	CTNAG	5 cut(s)	323, 572, 909, 1410, 1890
HpySE526I	ACGT	5 cut(s)	123, 388, 795, 1113, 2066
Hsp92I	GRCGYC	3 cut(s)	123, 1438, 2029
HspAI	GCGC	4 cut(s)	654, 1132, 1438, 2029
KasI	GGCGCC	2 cut(s)	1437, 2028
Ksp22I	TGATCA	2 cut(s)	286, 1335
KspAI	GTTAAC	1 cut(s)	1317
LmnI	GCTCC	2 cut(s)	515, 571
Lsp1109I	GCAGC	8 cut(s)	46, 451, 622, 649, 1315, 1439, 1519, 1943
LweI	GCATC	4 cut(s)	201, 302, 674, 842
MaeI	CTAG	2 cut(s)	432, 1355
MaeII	ACGT	5 cut(s)	123, 388, 795, 1113, 2066
MaeIII	GTNAC	5 cut(s)	384, 1109, 1114, 1357, 1630
MfeI	CAATTG	1 cut(s)	1971
MflI	RGATCY	3 cut(s)	375, 1248, 1520
MhlI	GDGCHC	1 cut(s)	520
MlsI	TGGCCA	1 cut(s)	925
MluNI	TGGCCA	1 cut(s)	925
Mly113I	GGCGCC	2 cut(s)	1438, 2029
MlyI	GAGTC	6 cut(s)	50, 496, 833, 1167, 1648, 1747
MmeI	TCCRAC	2 cut(s)	250, 1498
Mox20I	TGGCCA	1 cut(s)	925
Mph1103I	ATGCAT	1 cut(s)	835
MscI	TGGCCA	1 cut(s)	925
MseI	TTAA	5 cut(s)	648, 996, 1178, 1316, 1610
MslI	CAYNNNNRTG	2 cut(s)	453, 1996
Msp20I	TGGCCA	1 cut(s)	925
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	2 cut(s)	1299, 1775
MspR9I	CCNGG	2 cut(s)	182, 1300
MunI	CAATTG	1 cut(s)	1971
Mva1269I	GAATGC	3 cut(s)	441, 1000, 2060
MvaI	CCWGG	1 cut(s)	182
MvnI	CGCG	1 cut(s)	155
MwoI	GCNNNNNNNGC	8 cut(s)	34, 220, 662, 983, 1079, 1427, 1552, 1931
NarI	GGCGCC	2 cut(s)	1438, 2029
NciI	CCSGG	1 cut(s)	1300
NcoI	CCATGG	1 cut(s)	1997
NdeI	CATATG	2 cut(s)	746, 1936
NlaIV	GGNNCC	5 cut(s)	377, 567, 694, 1439, 2030
NmeAIII	GCCGAG	1 cut(s)	51
NmuCI	GTSAC	2 cut(s)	1109, 1630
NsiI	ATGCAT	1 cut(s)	835
NspI	RCATGY	3 cut(s)	385, 733, 1370
PagI	TCATGA	2 cut(s)	193, 592
PciI	ACATGT	3 cut(s)	381, 729, 1366
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 1806
PctI	GAATGC	3 cut(s)	441, 1000, 2060
PfeI	GAWTC	9 cut(s)	427, 897, 1076, 1462, 1698, 1751, 1769, 1960, 2042
PflFI	GACNNNGTC	1 cut(s)	125
PfoI	TCCNGGA	1 cut(s)	1298
PinAI	ACCGGT	1 cut(s)	1774
PkrI	GCNGC	9 cut(s)	36, 441, 612, 664, 988, 1330, 1429, 1509, 1933
PleI	GAGTC	6 cut(s)	50, 496, 833, 1166, 1648, 1746
PluTI	GGCGCC	2 cut(s)	1441, 2032
PpsI	GAGTC	6 cut(s)	50, 496, 833, 1166, 1648, 1746
Ppu21I	YACGTR	1 cut(s)	389
PscI	ACATGT	3 cut(s)	381, 729, 1366
PshBI	ATTAAT	1 cut(s)	648
Psp124BI	GAGCTC	1 cut(s)	520
Psp6I	CCWGG	1 cut(s)	180
PspGI	CCWGG	1 cut(s)	180
PspN4I	GGNNCC	5 cut(s)	377, 567, 694, 1439, 2030
PspPI	GGNCC	2 cut(s)	553, 1744
PstI	CTGCAG	1 cut(s)	1168
PstNI	CAGNNNCTG	2 cut(s)	811, 1079
PsuI	RGATCY	3 cut(s)	375, 1248, 1520
PsyI	GACNNNGTC	1 cut(s)	125
RseI	CAYNNNNRTG	2 cut(s)	453, 1996
SacI	GAGCTC	1 cut(s)	520
SaqAI	TTAA	5 cut(s)	648, 996, 1178, 1316, 1610
SatI	GCNGC	9 cut(s)	35, 440, 611, 663, 987, 1329, 1428, 1508, 1932
Sau96I	GGNCC	2 cut(s)	553, 1744
SbfI	CCTGCAGG	1 cut(s)	1168
SchI	GAGTC	6 cut(s)	50, 496, 833, 1167, 1648, 1747
ScrFI	CCNGG	2 cut(s)	182, 1300
SdaI	CCTGCAGG	1 cut(s)	1168
SduI	GDGCHC	1 cut(s)	520
SfaNI	GCATC	4 cut(s)	201, 302, 674, 842
SfcI	CTRYAG	4 cut(s)	1164, 1860, 1926, 2059
SfoI	GGCGCC	2 cut(s)	1439, 2030
SinI	GGWCC	1 cut(s)	553
SmiMI	CAYNNNNRTG	2 cut(s)	453, 1996
SmlI	CTYRAG	1 cut(s)	995
SmoI	CTYRAG	1 cut(s)	995
SpeI	ACTAGT	1 cut(s)	1354
Sse8387I	CCTGCAGG	1 cut(s)	1168
SsiI	CCGC	1 cut(s)	987
SspDI	GGCGCC	2 cut(s)	1437, 2028
SspMI	CTAG	2 cut(s)	432, 1355
SstI	GAGCTC	1 cut(s)	520
StyD4I	CCNGG	2 cut(s)	180, 1298
StyI	CCWWGG	3 cut(s)	561, 1917, 1997
TaaI	ACNGT	5 cut(s)	368, 634, 1062, 1501, 1861
TaiI	ACGT	5 cut(s)	126, 391, 798, 1116, 2069
TaqI	TCGA	5 cut(s)	120, 472, 1026, 1453, 1912
TauI	GCSGC	1 cut(s)	989
TfiI	GAWTC	9 cut(s)	427, 897, 1076, 1462, 1698, 1751, 1769, 1960, 2042
Tru1I	TTAA	5 cut(s)	648, 996, 1178, 1316, 1610
Tru9I	TTAA	5 cut(s)	648, 996, 1178, 1316, 1610
TscAI	CASTG	6 cut(s)	331, 883, 1065, 1114, 1504, 1954
TseFI	GTSAC	2 cut(s)	1109, 1630
TseI	GCWGC	8 cut(s)	34, 439, 610, 662, 1328, 1427, 1507, 1931
Tsp45I	GTSAC	2 cut(s)	1109, 1630
TspGWI	ACGGA	4 cut(s)	528, 550, 890, 1199
TspRI	CASTG	6 cut(s)	331, 883, 1065, 1114, 1504, 1954
Tth111I	GACNNNGTC	1 cut(s)	125
Vha464I	CTTAAG	1 cut(s)	995
VpaK11BI	GGWCC	1 cut(s)	553
VspI	ATTAAT	1 cut(s)	648
XapI	RAATTY	3 cut(s)	186, 544, 1100
XceI	RCATGY	3 cut(s)	385, 733, 1370
XcmI	CCANNNNNNNNNTGG	2 cut(s)	323, 1995
XmiI	GTMKAC	4 cut(s)	815, 1238, 1373, 1618
XspI	CTAG	2 cut(s)	432, 1355
ZraI	GACGTC	1 cut(s)	124
Zsp2I	ATGCAT	1 cut(s)	835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.