Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0003811

Physical Location & Seq

Genomic Coordinates Forward (+)

23660193 .. 23663972

Gene Structure 3780 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG248500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGAAGCGCCCTCCGAGCAACACCTTGTACGGCCTTTTTCGTTCCTTCCGAGAAAACAACCCGATTGATGACATCCCCTTACCGAACCTCCCGAGCTCTAACTTCGTTCATGGAAGTCGTCGACATCGGAAAAACTCCGTGTCCGGCGTAGCTCTCACTTCCTTCATCGAAGTCGACCCGAGCTCTCACTTCCCCATACAGAACCTCCCGTTCGGAGTGTTCAAGCCAAAACCGGCTTCAACGGCTCGACCGGGCGTGGCCATCGGCGATTATGTGTTGGACTTGTCAGCAATCGCCGCCGCCGGTCTCTTCAACGGTCCGATCCTCAGAAACTCCGATTGCTTTTATCAGCCTAATTTGAACAAGTTCTTGGCCTTGGGACGACCTGCTTGGAAGGAAGCACGTGCTACACTTCAGAAGCTACTTTCATCTACTGAGCCAACATTGCGTGACAATCAAAGTTTAAAGCAGGAATCACTTATTCCGTTGAGCGAGGTGGAAATGCTGCTTCCTGTGGCGATTGGGGACTTTACAGACTTCTTTTCATCAATGGATCACGTACACGACTGCGGGGCCAAGATTAATTGTAAGGCAGGTCAGGCAATTCCACTGAAATGGTTGGACCTACCAATTGCATATCATGGACGAGCTTCGTCGATTGTTATCTCTGGAACTGACATTACTCGACCCAGGTCAATCAGAGACGTGTCTCTTGAGACATTTTTACGTCCAAGACAACCTCCAGGCGGTCTGCTATATTTTGGTCCCGCAACGAAACTAGATTTTGAGCTTAAAATGGCTGCTGTAGTTGGTCCTGGAAATGAATTAGGGAATCCGGTGGATGTGAATGAGGCAGCAGATCACATTTTTGGACTTGTCTTGATGAATGGCTGGATTGCTAGAGATATCCAGGCAAAGGAATTTATTCCCAGTGTGCCTTTCCTAGGAAAAAGTTTTGGAACTACGATATCCCCTTGGATAGTGACACTCGAAGCTCTAGAACCATTTTCCTGTGATCCTCCCAAAAAGCACCCCCATCTAATGCCCTATGTCGCTGAAAATATCTCCGAAAGCTATGACATAACATTAGAGGTTCGAATTAAACCAGCTGGAGAGAGGCGCTCATCTGTGGTCACAAAGAGTAATTTCAACCACTTAATTTGGACATTGCCTCAGCAGCTAGCACACCTTACCGTCAATGGGTGCAACTTAAGGCCTGGAGATCTCTTTGGAACTGGGACCATCAGTGGACCTGGGCCAGAATCTTACGGAAGCTTGCTAGAGCTGACATGGGATAAGCCGTTGTCATTAAACGGCGTTACTCGTGAATTTCTTGAAGATGGAGACGAAGTCATCATTACTGGTTTTAGCAAGGGAAATGGCTACAAAGTAGGGTTCGGGAAATGCTCTGGAAAGATTGTTCCACCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004334 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006570 GO:0006572 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009063 GO:0009072 GO:0009074 GO:0009987 GO:0016054 GO:0016787 GO:0016822 GO:0016823 GO:0018958 GO:0019336 GO:0019439 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0071704 GO:0072329 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1901615 GO:1901616 GO:1901999 GO:1902000

KEGG Pathways

Metabolic & Signaling

ko00350 ko00643 ko01100 ko01120 map00350 map00643 map01100 map01120

Pfam Domains

Protein Families

FAA_hydrolase FAA_hydrolase_N

Protein Analysis

477

Amino Acids

52.13

Weight (kDa)

7.17

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAA_hydrolase_N	PF09298	67 - 171	1.8e-35	Fumarylacetoacetase N-terminal
FAA_hydrolase	PF01557	184 - 455	6.3e-33	Fumarylacetoacetate (FAA) hydrolase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12050
fragaria_vesca	FvH4_3g01030
malus_domestica	MD10G1331100.v1.1
prunus_persica	Prupe.4G011100_v2.0.a1
pyrus_communis	pycom10g28060
rosa_chinensis	RchiOBHm_Chr3g0477951 RchiOBHm_Chr3g0484131 RchiOBHm_Chr5g0001571 RchiOBHm_Chr5g0003621
rosa_laevigata	RLG00000030938 RLG00000030942
rosa_multiflora	Rmu_co8093718.1_g000001 Rmu_sc0003749.1_g000003 Rmu_sc0005991.1_g000008 Rmu_sc0006320.1_g000011 Rmu_sc0029518.1_g000002 Rmu_sc0040965.1_g000001
rosa_roxburghii	Rroxscaffold_1G00074840
rosa_rugosa	Rorug02G0302800 Rorug03G0164100 Rorug04G0391100
rosa_samantha	Rh3AG214900 Rh3AG258900 Rh3BG248500 Rh3CG242500 Rh3DG241900 Rh5AG012300 Rh5BG014900 Rh5BG015100 Rh5CG013300 Rh5DG012600 Rh5DG012700
rosa_wichuraiana	Rw3G019370 Rw5G001170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	394, 584
AccI	GTMKAC	2 cut(s)	121, 174
AciI	CCGC	5 cut(s)	297, 300, 570, 747, 768
AclWI	GGATC	3 cut(s)	316, 561, 1010
AcoI	YGGCCR	1 cut(s)	258
AcsI	RAATTY	2 cut(s)	920, 1328
AcuI	CTGAAG	1 cut(s)	398
AcvI	CACGTG	1 cut(s)	404
AfaI	GTAC	2 cut(s)	29, 561
AfiI	CCNNNNNNNGG	4 cut(s)	746, 916, 944, 1200
AflII	CTTAAG	1 cut(s)	1210
AflIII	ACRYGT	1 cut(s)	705
AgsI	TTSAA	6 cut(s)	223, 240, 313, 361, 1150, 1337
AjiI	CACGTC	1 cut(s)	706
AjnI	CCWGG	6 cut(s)	689, 742, 814, 909, 1216, 1252
AjuI	GAANNNNNNNTTGG	4 cut(s)	220, 252, 353, 385
AloI	GAACNNNNNNTCC	1 cut(s)	1404
Alw21I	GWGCWC	2 cut(s)	98, 185
Alw26I	GTCTC	5 cut(s)	311, 696, 710, 714, 1338
AlwI	GGATC	3 cut(s)	316, 561, 1010
Ama87I	CYCGRG	2 cut(s)	91, 178
AoxI	GGCC	6 cut(s)	31, 258, 372, 573, 1214, 1256
ApeKI	GCWGC	4 cut(s)	505, 800, 854, 1177
ApoI	RAATTY	2 cut(s)	920, 1328
AseI	ATTAAT	1 cut(s)	582
Asp700I	GAANNNNTTC	2 cut(s)	365, 924
AspA2I	CCTAGG	1 cut(s)	943
AspLEI	GCGC	2 cut(s)	9, 1122
AspS9I	GGNCC	8 cut(s)	317, 573, 622, 764, 812, 1239, 1250, 1256
AsuC2I	CCSGG	1 cut(s)	252
AsuII	TTCGAA	1 cut(s)	1096
AsuNHI	GCTAGC	1 cut(s)	1180
AvaI	CYCGRG	2 cut(s)	91, 178
AvaII	GGWCC	6 cut(s)	317, 622, 764, 812, 1239, 1250
AvrII	CCTAGG	1 cut(s)	943
BalI	TGGCCA	1 cut(s)	260
BanII	GRGCYC	2 cut(s)	98, 185
BauI	CACGAG	1 cut(s)	1323
BbrPI	CACGTG	1 cut(s)	404
Bbv12I	GWGCWC	2 cut(s)	98, 185
BbvCI	CCTCAGC	1 cut(s)	1173
BbvI	GCAGC	4 cut(s)	492, 787, 866, 1189
BccI	CCATC	4 cut(s)	269, 1044, 1250, 1334
BceAI	ACGGC	4 cut(s)	46, 258, 1285, 1330
BciT130I	CCWGG	6 cut(s)	691, 744, 816, 911, 1218, 1254
BcnI	CCSGG	1 cut(s)	252
BcoDI	GTCTC	5 cut(s)	311, 696, 710, 714, 1338
BfaI	CTAG	6 cut(s)	779, 900, 944, 998, 1181, 1280
BfmI	CTRYAG	1 cut(s)	804
BfoI	RGCGCY	2 cut(s)	10, 1123
BfrI	CTTAAG	1 cut(s)	1210
BfuAI	ACCTGC	2 cut(s)	394, 584
BglII	AGATCT	1 cut(s)	1222
BisI	GCNGC	6 cut(s)	297, 300, 506, 801, 855, 1178
BlnI	CCTAGG	1 cut(s)	943
BlsI	GCNGC	6 cut(s)	298, 301, 507, 802, 856, 1179
Bme1390I	CCNGG	7 cut(s)	252, 691, 744, 816, 911, 1218, 1254
Bme18I	GGWCC	6 cut(s)	317, 622, 764, 812, 1239, 1250
BmeT110I	CYCGRG	2 cut(s)	91, 178
BmgBI	CACGTC	1 cut(s)	706
BmgT120I	GGNCC	8 cut(s)	317, 573, 622, 764, 812, 1239, 1250, 1256
BmiI	GGNNCC	3 cut(s)	574, 766, 1240
BmrFI	CCNGG	7 cut(s)	252, 691, 744, 816, 911, 1218, 1254
BmrI	ACTGGG	2 cut(s)	924, 1245
BmtI	GCTAGC	1 cut(s)	1184
BmuI	ACTGGG	2 cut(s)	924, 1245
BoxI	GACNNNNGTC	1 cut(s)	691
BplI	GAGNNNNNCTC	2 cut(s)	1106, 1138
BpmI	CTGGAG	3 cut(s)	726, 1131, 1239
Bpu10I	CCTNAGC	1 cut(s)	1173
Bpu14I	TTCGAA	1 cut(s)	1096
BpuEI	CTTGAG	1 cut(s)	734
BpuMI	CCSGG	1 cut(s)	252
BsaAI	YACGTR	2 cut(s)	404, 559
BsaBI	GATNNNNATC	1 cut(s)	662
BsaI	GGTCTC	1 cut(s)	311
BsaJI	CCNNGG	5 cut(s)	375, 689, 943, 974, 1253
BsaWI	WCCGGW	1 cut(s)	835
BsaXI	ACNNNNNCTCC	6 cut(s)	72, 102, 189, 219, 1335, 1365
Bsc4I	CCNNNNNNNGG	4 cut(s)	746, 916, 944, 1200
Bse118I	RCCGGY	2 cut(s)	232, 302
Bse1I	ACTGG	3 cut(s)	930, 1240, 1366
Bse3DI	GCAATG	2 cut(s)	443, 1166
Bse8I	GATNNNNATC	1 cut(s)	662
BseBI	CCWGG	6 cut(s)	691, 744, 816, 911, 1218, 1254
BseDI	CCNNGG	5 cut(s)	375, 689, 943, 974, 1253
BseGI	GGATG	2 cut(s)	72, 847
BseJI	GATNNNNATC	1 cut(s)	662
BseLI	CCNNNNNNNGG	4 cut(s)	746, 916, 944, 1200
BseMI	GCAATG	2 cut(s)	443, 1166
BseMII	CTCAG	3 cut(s)	340, 426, 1187
BseNI	ACTGG	3 cut(s)	930, 1240, 1366
BseXI	GCAGC	4 cut(s)	492, 787, 866, 1189
Bsh1285I	CGRYCG	1 cut(s)	251
BshFI	GGCC	6 cut(s)	33, 260, 374, 575, 1216, 1258
BsiEI	CGRYCG	1 cut(s)	251
BsiHKAI	GWGCWC	2 cut(s)	98, 185
BsiHKCI	CYCGRG	2 cut(s)	91, 178
BsiSI	CCGG	5 cut(s)	144, 233, 251, 303, 836
BslFI	GGGAC	4 cut(s)	393, 539, 750, 1252
BslI	CCNNNNNNNGG	4 cut(s)	746, 916, 944, 1200
BsmAI	GTCTC	5 cut(s)	311, 696, 710, 714, 1338
BsmBI	CGTCTC	2 cut(s)	696, 1338
BsmFI	GGGAC	4 cut(s)	393, 539, 750, 1252
BsnI	GGCC	6 cut(s)	33, 260, 374, 575, 1216, 1258
Bso31I	GGTCTC	1 cut(s)	311
BsoBI	CYCGRG	2 cut(s)	91, 178
Bsp119I	TTCGAA	1 cut(s)	1096
Bsp1286I	GDGCHC	2 cut(s)	98, 185
Bsp143I	GATC	5 cut(s)	321, 553, 859, 1015, 1222
BspACI	CCGC	5 cut(s)	297, 300, 570, 747, 768
BspANI	GGCC	6 cut(s)	33, 260, 374, 575, 1216, 1258
BspCNI	CTCAG	3 cut(s)	339, 427, 1186
BspLI	GGNNCC	3 cut(s)	574, 766, 1240
BspMI	ACCTGC	2 cut(s)	394, 584
BspOI	GCTAGC	1 cut(s)	1184
BspPI	GGATC	3 cut(s)	316, 561, 1010
BspT104I	TTCGAA	1 cut(s)	1096
BspTI	CTTAAG	1 cut(s)	1210
BspTNI	GGTCTC	1 cut(s)	311
BsrDI	GCAATG	2 cut(s)	443, 1166
BsrFI	RCCGGY	2 cut(s)	232, 302
BsrI	ACTGG	3 cut(s)	930, 1240, 1366
BssAI	RCCGGY	2 cut(s)	232, 302
BssECI	CCNNGG	5 cut(s)	375, 689, 943, 974, 1253
BssMI	GATC	5 cut(s)	321, 553, 859, 1015, 1222
BssSI	CACGAG	1 cut(s)	1323
BssT1I	CCWWGG	3 cut(s)	375, 943, 974
Bst2BI	CACGAG	1 cut(s)	1323
Bst2UI	CCWGG	6 cut(s)	691, 744, 816, 911, 1218, 1254
Bst4CI	ACNGT	2 cut(s)	317, 1195
Bst6I	CTCTTC	1 cut(s)	314
BstAFI	CTTAAG	1 cut(s)	1210
BstBAI	YACGTR	2 cut(s)	404, 559
BstBI	TTCGAA	1 cut(s)	1096
BstC8I	GCNNGC	2 cut(s)	1182, 1277
BstDEI	CTNAG	3 cut(s)	326, 435, 1173
BstENI	CCTNNNNNAGG	1 cut(s)	942
BstF5I	GGATG	2 cut(s)	72, 847
BstH2I	RGCGCY	2 cut(s)	10, 1123
BstHHI	GCGC	2 cut(s)	9, 1122
BstKTI	GATC	5 cut(s)	324, 556, 862, 1018, 1225
BstMAI	GTCTC	5 cut(s)	311, 696, 710, 714, 1338
BstMBI	GATC	5 cut(s)	321, 553, 859, 1015, 1222
BstMCI	CGRYCG	1 cut(s)	251
BstMWI	GCNNNNNNNGC	6 cut(s)	15, 242, 296, 445, 599, 1177
BstNI	CCWGG	6 cut(s)	691, 744, 816, 911, 1218, 1254
BstPAI	GACNNNNGTC	1 cut(s)	691
BstSCI	CCNGG	7 cut(s)	250, 689, 742, 814, 909, 1216, 1252
BstSFI	CTRYAG	1 cut(s)	804
BstV1I	GCAGC	4 cut(s)	492, 787, 866, 1189
BstX2I	RGATCY	1 cut(s)	1222
BstXI	CCANNNNNNTGG	1 cut(s)	615
BstYI	RGATCY	1 cut(s)	1222
BsuRI	GGCC	6 cut(s)	33, 260, 374, 575, 1216, 1258
BtrI	CACGTC	1 cut(s)	706
BtsCI	GGATG	2 cut(s)	72, 847
BtsIMutI	CAGTG	3 cut(s)	608, 937, 1252
BveI	ACCTGC	2 cut(s)	394, 584
Cac8I	GCNNGC	2 cut(s)	1182, 1277
CfoI	GCGC	2 cut(s)	9, 1122
Cfr10I	RCCGGY	2 cut(s)	232, 302
Cfr13I	GGNCC	8 cut(s)	317, 573, 622, 764, 812, 1239, 1250, 1256
CpoI	CGGWCCG	1 cut(s)	317
Csp6I	GTAC	2 cut(s)	28, 560
CspCI	CAANNNNNGTGG	2 cut(s)	1142, 1177
CspI	CGGWCCG	1 cut(s)	317
CviAII	CATG	3 cut(s)	110, 641, 1290
CviQI	GTAC	2 cut(s)	28, 560
DdeI	CTNAG	3 cut(s)	326, 435, 1173
DpnI	GATC	5 cut(s)	323, 555, 861, 1017, 1224
DpnII	GATC	5 cut(s)	321, 553, 859, 1015, 1222
DraI	TTTAAA	1 cut(s)	465
EaeI	YGGCCR	1 cut(s)	258
Eam1104I	CTCTTC	1 cut(s)	314
EarI	CTCTTC	1 cut(s)	314
Ecl136II	GAGCTC	2 cut(s)	96, 183
Eco130I	CCWWGG	3 cut(s)	375, 943, 974
Eco147I	AGGCCT	1 cut(s)	1216
Eco24I	GRGCYC	2 cut(s)	98, 185
Eco31I	GGTCTC	1 cut(s)	311
Eco32I	GATATC	2 cut(s)	907, 969
Eco47I	GGWCC	6 cut(s)	317, 622, 764, 812, 1239, 1250
Eco53kI	GAGCTC	2 cut(s)	96, 183
Eco57I	CTGAAG	1 cut(s)	398
Eco72I	CACGTG	1 cut(s)	404
Eco88I	CYCGRG	2 cut(s)	91, 178
EcoICRI	GAGCTC	2 cut(s)	96, 183
EcoNI	CCTNNNNNAGG	1 cut(s)	942
EcoRII	CCWGG	6 cut(s)	689, 742, 814, 909, 1216, 1252
EcoRV	GATATC	2 cut(s)	907, 969
EcoT14I	CCWWGG	3 cut(s)	375, 943, 974
EcoT38I	GRGCYC	2 cut(s)	98, 185
ErhI	CCWWGG	3 cut(s)	375, 943, 974
Esp3I	CGTCTC	2 cut(s)	696, 1338
FaeI	CATG	3 cut(s)	113, 644, 1293
FaqI	GGGAC	4 cut(s)	393, 539, 750, 1252
FatI	CATG	3 cut(s)	109, 640, 1289
FauI	CCCGC	2 cut(s)	563, 775
FblI	GTMKAC	2 cut(s)	121, 174
Fnu4HI	GCNGC	6 cut(s)	297, 300, 506, 801, 855, 1178
FokI	GGATG	2 cut(s)	59, 854
FriOI	GRGCYC	2 cut(s)	98, 185
Fsp4HI	GCNGC	6 cut(s)	297, 300, 506, 801, 855, 1178
FspBI	CTAG	6 cut(s)	779, 900, 944, 998, 1181, 1280
GlaI	GCGC	2 cut(s)	8, 1121
GluI	GCNGC	6 cut(s)	297, 300, 506, 801, 855, 1178
GsuI	CTGGAG	3 cut(s)	726, 1131, 1239
HaeII	RGCGCY	2 cut(s)	10, 1123
HaeIII	GGCC	6 cut(s)	33, 260, 374, 575, 1216, 1258
HapII	CCGG	5 cut(s)	144, 233, 251, 303, 836
HhaI	GCGC	2 cut(s)	9, 1122
Hin1II	CATG	3 cut(s)	113, 644, 1293
Hin6I	GCGC	2 cut(s)	7, 1120
HinP1I	GCGC	2 cut(s)	7, 1120
HincII	GTYRAC	2 cut(s)	122, 175
HindII	GTYRAC	2 cut(s)	122, 175
HindIII	AAGCTT	1 cut(s)	1273
HinfI	GANTC	3 cut(s)	473, 832, 1262
HpaII	CCGG	5 cut(s)	144, 233, 251, 303, 836
Hpy166II	GTNNAC	4 cut(s)	122, 175, 562, 1250
Hpy188III	TCNNGA	9 cut(s)	91, 669, 713, 880, 998, 1325, 1334, 1399, 1410
Hpy8I	GTNNAC	4 cut(s)	122, 175, 562, 1250
Hpy99I	CGWCG	2 cut(s)	123, 658
HpyAV	CCTTC	3 cut(s)	55, 172, 388
HpyCH4III	ACNGT	2 cut(s)	317, 1195
HpyCH4IV	ACGT	4 cut(s)	403, 558, 705, 727
HpyCH4V	TGCA	2 cut(s)	635, 1206
HpyF10VI	GCNNNNNNNGC	6 cut(s)	15, 242, 296, 445, 599, 1177
HpyF3I	CTNAG	3 cut(s)	326, 435, 1173
HpySE526I	ACGT	4 cut(s)	403, 558, 705, 727
Hsp92II	CATG	3 cut(s)	113, 644, 1293
HspAI	GCGC	2 cut(s)	7, 1120
Kzo9I	GATC	5 cut(s)	321, 553, 859, 1015, 1222
Lsp1109I	GCAGC	4 cut(s)	492, 787, 866, 1189
MaeI	CTAG	6 cut(s)	779, 900, 944, 998, 1181, 1280
MaeII	ACGT	4 cut(s)	403, 558, 705, 727
MaeIII	GTNAC	4 cut(s)	449, 982, 1132, 1318
MalI	GATC	5 cut(s)	323, 555, 861, 1017, 1224
MboI	GATC	5 cut(s)	321, 553, 859, 1015, 1222
MboII	GAAGA	2 cut(s)	301, 1349
MfeI	CAATTG	1 cut(s)	630
MflI	RGATCY	1 cut(s)	1222
MhlI	GDGCHC	2 cut(s)	98, 185
MlsI	TGGCCA	1 cut(s)	260
MluNI	TGGCCA	1 cut(s)	260
MmeI	TCCRAC	2 cut(s)	258, 600
Mox20I	TGGCCA	1 cut(s)	260
MroXI	GAANNNNTTC	2 cut(s)	365, 924
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	7 cut(s)	464, 582, 792, 1101, 1157, 1211, 1310
MslI	CAYNNNNRTG	1 cut(s)	613
Msp20I	TGGCCA	1 cut(s)	260
MspA1I	CMGCKG	1 cut(s)	1109
MspCI	CTTAAG	1 cut(s)	1210
MspI	CCGG	5 cut(s)	144, 233, 251, 303, 836
MspR9I	CCNGG	7 cut(s)	252, 691, 744, 816, 911, 1218, 1254
MunI	CAATTG	1 cut(s)	630
MvaI	CCWGG	6 cut(s)	691, 744, 816, 911, 1218, 1254
MwoI	GCNNNNNNNGC	6 cut(s)	15, 242, 296, 445, 599, 1177
NciI	CCSGG	1 cut(s)	252
NdeII	GATC	5 cut(s)	321, 553, 859, 1015, 1222
NheI	GCTAGC	1 cut(s)	1180
NlaIII	CATG	3 cut(s)	113, 644, 1293
NlaIV	GGNNCC	3 cut(s)	574, 766, 1240
NmuCI	GTSAC	3 cut(s)	449, 982, 1132
NspV	TTCGAA	1 cut(s)	1096
PceI	AGGCCT	1 cut(s)	1216
PcsI	WCGNNNNNNNCGW	1 cut(s)	46
PdmI	GAANNNNTTC	2 cut(s)	365, 924
PfeI	GAWTC	3 cut(s)	473, 832, 1262
PflFI	GACNNNGTC	1 cut(s)	1349
PfoI	TCCNGGA	1 cut(s)	814
PkrI	GCNGC	6 cut(s)	298, 301, 507, 802, 856, 1179
PmaCI	CACGTG	1 cut(s)	404
PmlI	CACGTG	1 cut(s)	404
Ppu21I	YACGTR	2 cut(s)	404, 559
PshAI	GACNNNNGTC	1 cut(s)	691
PshBI	ATTAAT	1 cut(s)	582
Psp124BI	GAGCTC	2 cut(s)	98, 185
Psp6I	CCWGG	6 cut(s)	689, 742, 814, 909, 1216, 1252
PspCI	CACGTG	1 cut(s)	404
PspGI	CCWGG	6 cut(s)	689, 742, 814, 909, 1216, 1252
PspN4I	GGNNCC	3 cut(s)	574, 766, 1240
PspPI	GGNCC	8 cut(s)	317, 573, 622, 764, 812, 1239, 1250, 1256
PsrI	GAACNNNNNNTAC	2 cut(s)	664, 696
PsuI	RGATCY	1 cut(s)	1222
PsyI	GACNNNGTC	1 cut(s)	1349
PvuII	CAGCTG	1 cut(s)	1109
RsaI	GTAC	2 cut(s)	29, 561
RsaNI	GTAC	2 cut(s)	28, 560
RseI	CAYNNNNRTG	1 cut(s)	613
Rsr2I	CGGWCCG	1 cut(s)	317
RsrII	CGGWCCG	1 cut(s)	317
SacI	GAGCTC	2 cut(s)	98, 185
SalI	GTCGAC	2 cut(s)	120, 173
SaqAI	TTAA	7 cut(s)	464, 582, 792, 1101, 1157, 1211, 1310
SatI	GCNGC	6 cut(s)	297, 300, 506, 801, 855, 1178
Sau3AI	GATC	5 cut(s)	321, 553, 859, 1015, 1222
Sau96I	GGNCC	8 cut(s)	317, 573, 622, 764, 812, 1239, 1250, 1256
ScrFI	CCNGG	7 cut(s)	252, 691, 744, 816, 911, 1218, 1254
SduI	GDGCHC	2 cut(s)	98, 185
SfcI	CTRYAG	1 cut(s)	804
SfuI	TTCGAA	1 cut(s)	1096
SinI	GGWCC	6 cut(s)	317, 622, 764, 812, 1239, 1250
SmiMI	CAYNNNNRTG	1 cut(s)	613
SmlI	CTYRAG	2 cut(s)	713, 1210
SmoI	CTYRAG	2 cut(s)	713, 1210
SseBI	AGGCCT	1 cut(s)	1216
SsiI	CCGC	5 cut(s)	297, 300, 570, 747, 768
SspMI	CTAG	6 cut(s)	779, 900, 944, 998, 1181, 1280
SstI	GAGCTC	2 cut(s)	98, 185
StuI	AGGCCT	1 cut(s)	1216
StyD4I	CCNGG	7 cut(s)	250, 689, 742, 814, 909, 1216, 1252
StyI	CCWWGG	3 cut(s)	375, 943, 974
TaaI	ACNGT	2 cut(s)	317, 1195
TaiI	ACGT	4 cut(s)	406, 561, 708, 730
TaqI	TCGA	8 cut(s)	121, 168, 174, 247, 656, 685, 990, 1096
TauI	GCSGC	2 cut(s)	299, 302
TfiI	GAWTC	3 cut(s)	473, 832, 1262
Tru1I	TTAA	7 cut(s)	464, 582, 792, 1101, 1157, 1211, 1310
Tru9I	TTAA	7 cut(s)	464, 582, 792, 1101, 1157, 1211, 1310
TscAI	CASTG	3 cut(s)	615, 937, 1252
TseFI	GTSAC	3 cut(s)	449, 982, 1132
TseI	GCWGC	4 cut(s)	505, 800, 854, 1177
Tsp45I	GTSAC	3 cut(s)	449, 982, 1132
TspDTI	ATGAA	7 cut(s)	17, 98, 154, 417, 534, 837, 899
TspGWI	ACGGA	3 cut(s)	127, 474, 1284
TspRI	CASTG	3 cut(s)	615, 937, 1252
Tth111I	GACNNNGTC	1 cut(s)	1349
Vha464I	CTTAAG	1 cut(s)	1210
VpaK11BI	GGWCC	6 cut(s)	317, 622, 764, 812, 1239, 1250
VspI	ATTAAT	1 cut(s)	582
XagI	CCTNNNNNAGG	1 cut(s)	942
XapI	RAATTY	2 cut(s)	920, 1328
XbaI	TCTAGA	1 cut(s)	997
XmaJI	CCTAGG	1 cut(s)	943
XmiI	GTMKAC	2 cut(s)	121, 174
XmnI	GAANNNNTTC	2 cut(s)	365, 924
XspI	CTAG	6 cut(s)	779, 900, 944, 998, 1181, 1280

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.