Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0003023

Physical Location & Seq

Genomic Coordinates Forward (+)

4393893 .. 4406332

Gene Structure 12440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G088900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2955 bp

ATGGACAATGCCGACGTTGAAGCTGGTGGAGAAGACGAGTTCCATGGCAAGAGCGGTCGCAAGTATCGCCCGGTTGTCGACGACGATCGCGCCGTGCTCGAGATGTCATCCATGGATCCTTCCTCTTCTTCTTCTTCTTCGTCTGCTCTTCCTGTTCACCAAGCTTCCCTCAAGAGAATAAAAGTGGGCACCCAGGAAAACGTGGGTTCTGATGCAAAAGAAGGGCACCCACCTACTCATGTGCAAGCCAATGGGCCCCAGAGAGAATCCAAATTGGAATTGTTTGGTTTTGATTCTCTCGTCAACATTCTCGGTCTTAAGAGTATGACAGATGAGCAAAGTGCAGCACCATCTAGTCCTAGAGATGGTGAAAATATTTCTATCACCCAGGGGCGACCGAAGCCTACTGGTGTCAAATTGGGAACACTGATGGGTGTATTCGTCCCGTGCTTGCAAAATATACTAGGAATTATCTACTATATTCGATTTTCTTGGATTGTTGGTATGGCTGGTATAGCTGAGTCACTATTCTTGGTTTCATTCTGTGGCTTGTGTACTTTCCTGACTGCAATATCATTGAGTGCAATTGCAACCAATGGTGCTATGAAGGGTGGTGGACCGTACTATCTAATTGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGATTATGTTTCTTTCTAGGAAATGCTGTTGCTGGATCTCTTTATGTCTTGGGAGCTGTTGAAACATTCTTGAAAGCTGTGCCAGCTGCTGGGATTTTTAGAGAGACCACAAGAGTTAATGGAACATCAGTCGCAATACAAAGTCCGAGTTCACATGACCTGCAAATCTATGGGATAGTTGTGACTATTATTTTATGCTTTATTGTGTTTGGTGGTGTGAAAATGATCAATCGGGTTGCACCTGCTTTCCTCATACCCGTTTTACTTTCGCTGTTCTGCATATATATCGGGATTGCTTTGGCGAGGAAGAATTACCCTGTAGATGGAGTCACGGGCTTGAGTTTGGACTCCTTCAAAGAAAACTGGAATTCGGATTATCAGAAGACCAATAACGCTGGAATTCCTGATCCTGATGGAAAAGTGTCCTGGAATTTCAATGCAATGGTCGGCCTCTTTTTCCCTGCTGTGACGGGAATTATGGCAGGTTCAAATCGGTCAGCGTCACTGAGAGATACTCAGCGTTCAATTCCTATTGGAACACTGGCTGCGACTCTTTCAACTACTGCAATGTATCTGGTCTCTGTGTTATTATTTGGAGCCCTTGCTAGCAGACAGAAGCTTTTGACTGATAGGCTACTTACTGCTACAATAGCTTGGCCTTTCCCAGTATTCATTTACATTGGAATAATTCTATCAACCTTGGGCGCTGCTCTTCAAAGCCTGACTGGTGCTCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTGTTCTTAACTACTTCAAGGTTTCAGATGGGAGTGAGCCTAACATTGCTACCTTATTTACCGCGCTCCTCTGTATCGGGTGTGTCGTAATTGGGAACCTGGATCTTATCACGCCAACTATAACTATGTTTTTCCTTCTGTGTTATGCGGGCGTGAACTTATCTTGCTTCCTTCTGGATCTTCTAGATGCTCCCAGCTGGCGTCCGCGGTGGAAATTTCACCACTGGAGCCTCTCTCTTCTTGGAGCCTTACTTTGTATAGTGATAATGTTCTTGATCTCCTGGTCATTCACTGTCGTGTCTCTAGCCCTGGCAAGCCTTATATATTATTATGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTAGCTCTTCGCAGTCTTCGATCGCTAGGAGCAAACCAAGTGCACCCAAAGAATTGGTATCCCATCCCCCTGATATTCTGCCGGCCTTGGGGGAAGCTGCCAGAAAATGTACCTTGCCATCCCAAACTTGCTGACTTTGCCAACTGTATGAAGAAGAAGGGCAGGGGAATGTCCATCTTTTTTTCTATTCTAGATGGTGACTACCGTGAATGTGCTGAAGATGCCAAGGCTGCATGCAAGCAGCTTGCTACCTACCTTGACTACAAGAATTGTGAAGGTGTAGCTGAGATTGTTGTGGCCCCCAGTATGTCTGAAGGTTTCCGTGGCATTGTTCAGACAATGGGTCTTGGAAATCTGAAGCCAAACATTGTGGTGATGCGGTATCCCGAAATATGGCGTCGTGAAAACTTGACGGAAATTCCAGCCACCTTTGTTGAAATAATTAATGATTGCATTGTTGCAAACAAGGCAGTTGTTATTGTCAAGGGTCTTGACGAATGGCCCAATGAGTATCAGAGGCAGTATGGTACCATCGATTTGTATTGGATAGTGAGAGATGGTGGTCTCATGCTTCTTCTCTCTCAACTCCTCCTCACTAAGGAAAGCTTTGAGAGTTGTAAAATCCAGGTTTTCTGCATTGCGGAAGAGGATACTGATGCAGAGGGGCTCAAGGCTGATGTAAAGAAGTTTCTGTATGATCTTCGGATGCATGCCGAAGTGATTGTTGTAACAATGAAATCGTGGGATGTGCAAGCTGACAGTGGGTCTCCTCAAGATGAATCTGTGGAAGCATTTTCTGGTGCTCAGCAGCGTATAGCTAATTACATGGCTGATATGAAGGCAGCATCAGAAAAACAGGGAACCTCGCTGATGGCTGACGGGAAGCCGGTTGTCGTGGATGAACAGCAGGTGGAGAAGTTTCTTTACACTACTCTGAAGCTGAATTCAACAATACTCAGATACTCGAGAATGGCTGCAGTTGTTCTTGTGAGCTTACCTCCACCTCCGGCCAACCACCCGGCATACTTCTACATGGAGTACATGGATTTGTTGGTGGAAAATGTGCCACGACTACTGATTGTGAGAGGATACCGTAAAGATGTTGTAACTCTATTCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006820 GO:0006821 GO:0008150 GO:0008324 GO:0008509 GO:0008511 GO:0009674 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015103 GO:0015108 GO:0015291 GO:0015293 GO:0015294 GO:0015296 GO:0015318 GO:0015370 GO:0015373 GO:0015377 GO:0015378 GO:0015379 GO:0015672 GO:0015698 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0031984 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055064 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055081 GO:0055083 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0097708 GO:0098655 GO:0098656 GO:0098660 GO:0098661 GO:0098662 GO:0098771 GO:0098791 GO:1902476

KEGG Pathways

Metabolic & Signaling

ko04966 map04966

Pfam Domains

Protein Families

AA_permease SLC12

Protein Analysis

985

Amino Acids

107.55

Weight (kDa)

6.32

Isoelectric Point (pI)

35.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30450 AT1G30450 AT1G30450 AT1G30450
fragaria_vesca	FvH4_3g09910 FvH4_3g09910 FvH4_3g09910 FvH4_3g09910 FvH4_3g09910 FvH4_3g09910
malus_domestica	MD05G1275000.v1.1 MD10G1254500.v1.1
prunus_persica	Prupe.4G088900_v2.0.a1 Prupe.4G088900_v2.0.a1
pyrus_communis	pycom05g25640 pycom10g21010
rosa_chinensis	RchiOBHm_Chr5g0015611 RchiOBHm_Chr5g0015801 RchiOBHm_Chr5g0015811
rosa_laevigata	RLG00000032213 RLG00000032223
rosa_multiflora	Rmu_co8164906.1_g000001 Rmu_sc0003989.1_g000002 Rmu_sc0005803.1_g000020 Rmu_sc0007629.1_g000001 Rmu_sc0011313.1_g000001 Rmu_sc0011313.1_g000002 Rmu_sc0016973.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060860
rosa_rugosa	Rorug05G0028900
rosa_samantha	Rh5AG122200 Rh5BG120800 Rh5CG131200 Rh5CG132900 Rh5CG133000 Rh5DG119800 Rh5DG120900
rosa_wichuraiana	Rw5G010540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	919, 2731
Acc36I	ACCTGC	4 cut(s)	837, 919, 1142, 2731
Acc65I	GGTACC	1 cut(s)	2360
AccB1I	GGYRCC	3 cut(s)	188, 225, 2360
AccB7I	CCANNNNNTGG	2 cut(s)	656, 758
AccBSI	CCGCTC	1 cut(s)	54
AccI	GTMKAC	1 cut(s)	78
AccII	CGCG	3 cut(s)	90, 1505, 1648
AciI	CCGC	7 cut(s)	54, 1503, 1589, 1646, 1648, 2212, 2474
AclWI	GGATC	6 cut(s)	110, 123, 712, 1070, 1551, 1626
AcoI	YGGCCR	1 cut(s)	2841
AcsI	RAATTY	6 cut(s)	1036, 1068, 1099, 1655, 2250, 2776
AcuI	CTGAAG	4 cut(s)	2070, 2166, 2210, 2789
AcyI	GRCGYC	2 cut(s)	1642, 2230
AfaI	GTAC	5 cut(s)	556, 623, 1944, 2362, 2873
AfiI	CCNNNNNNNGG	7 cut(s)	365, 656, 758, 992, 1921, 2226, 2431
AflII	CTTAAG	1 cut(s)	317
AhdI	GACNNNNNGTC	2 cut(s)	2175, 2596
AjiI	CACGTC	1 cut(s)	1406
AjnI	CCWGG	7 cut(s)	192, 387, 1094, 1539, 1721, 1749, 2457
AjuI	GAANNNNNNNTTGG	2 cut(s)	1824, 1856
AleI	CACNNNNGTG	1 cut(s)	1736
Alw21I	GWGCWC	4 cut(s)	99, 1402, 1878, 2638
Alw26I	GTCTC	5 cut(s)	767, 1252, 1746, 2402, 2604
Alw44I	GTGCAC	1 cut(s)	1874
AlwI	GGATC	6 cut(s)	110, 123, 712, 1070, 1551, 1626
AlwNI	CAGNNNCTG	1 cut(s)	758
Ama87I	CYCGRG	2 cut(s)	98, 2797
AoxI	GGCC	7 cut(s)	254, 1117, 1325, 1916, 2130, 2333, 2841
ApaI	GGGCCC	1 cut(s)	258
ApaLI	GTGCAC	1 cut(s)	1874
ApoI	RAATTY	6 cut(s)	1036, 1068, 1099, 1655, 2250, 2776
AseI	ATTAAT	1 cut(s)	2277
Asp718I	GGTACC	1 cut(s)	2360
AspLEI	GCGC	3 cut(s)	92, 1376, 1507
AspS9I	GGNCC	6 cut(s)	254, 255, 617, 647, 2131, 2334
AsuC2I	CCSGG	2 cut(s)	71, 2852
AsuHPI	GGTGA	7 cut(s)	149, 376, 380, 1652, 1817, 2042, 2218
AsuNHI	GCTAGC	1 cut(s)	1274
AvaI	CYCGRG	2 cut(s)	98, 2797
AvaII	GGWCC	2 cut(s)	617, 647
BaeGI	GKGCMC	5 cut(s)	191, 228, 258, 643, 1878
BamHI	GGATCC	1 cut(s)	115
BanI	GGYRCC	3 cut(s)	188, 225, 2360
BanII	GRGCYC	3 cut(s)	258, 1270, 2502
BarI	GAAGNNNNNNTAC	2 cut(s)	2741, 2773
BbsI	GAAGAC	3 cut(s)	39, 1058, 1841
Bbv12I	GWGCWC	4 cut(s)	99, 1402, 1878, 2638
BceAI	ACGGC	1 cut(s)	77
BcgI	CGANNNNNNTGC	2 cut(s)	937, 971
BciT130I	CCWGG	7 cut(s)	194, 389, 1096, 1541, 1723, 1751, 2459
BciVI	GTATCC	4 cut(s)	1902, 2226, 2476, 2915
BclI	TGATCA	1 cut(s)	894
BcnI	CCSGG	2 cut(s)	71, 2852
BcoDI	GTCTC	5 cut(s)	767, 1252, 1746, 2402, 2604
BfmI	CTRYAG	2 cut(s)	987, 2808
BfoI	RGCGCY	1 cut(s)	1377
BfrI	CTTAAG	1 cut(s)	317
BfuAI	ACCTGC	4 cut(s)	837, 919, 1142, 2731
BfuI	GTATCC	4 cut(s)	1902, 2226, 2476, 2915
BlpI	GCTNAGC	1 cut(s)	2637
Bme1390I	CCNGG	9 cut(s)	71, 194, 389, 1096, 1541, 1723, 1751, 2459, 2852
Bme18I	GGWCC	2 cut(s)	617, 647
BmeRI	GACNNNNNGTC	2 cut(s)	2175, 2596
BmeT110I	CYCGRG	2 cut(s)	98, 2797
BmgBI	CACGTC	1 cut(s)	1406
BmgT120I	GGNCC	6 cut(s)	254, 255, 617, 647, 2131, 2334
BmrFI	CCNGG	9 cut(s)	71, 194, 389, 1096, 1541, 1723, 1751, 2459, 2852
BmrI	ACTGGG	3 cut(s)	1328, 1810, 2130
BmsI	GCATC	8 cut(s)	202, 1618, 1788, 2044, 2199, 2479, 2529, 2687
BmtI	GCTAGC	1 cut(s)	1278
BmuI	ACTGGG	3 cut(s)	1328, 1810, 2130
BpiI	GAAGAC	3 cut(s)	39, 1058, 1841
BplI	GAGNNNNNCTC	6 cut(s)	1168, 1200, 1660, 1692, 2815, 2847
BpmI	CTGGAG	1 cut(s)	1687
Bpu1102I	GCTNAGC	1 cut(s)	2637
BpuEI	CTTGAG	4 cut(s)	155, 1027, 2486, 2589
BpuMI	CCSGG	2 cut(s)	71, 2852
Bsa29I	ATCGAT	1 cut(s)	2367
BsaHI	GRCGYC	2 cut(s)	1642, 2230
BsaI	GGTCTC	4 cut(s)	767, 1252, 2402, 2604
BsaXI	ACNNNNNCTCC	2 cut(s)	1384, 1414
Bsc4I	CCNNNNNNNGG	7 cut(s)	365, 656, 758, 992, 1921, 2226, 2431
Bse118I	RCCGGY	2 cut(s)	1914, 2719
Bse1I	ACTGG	8 cut(s)	412, 1037, 1215, 1334, 1399, 1670, 1805, 2136
Bse3DI	GCAATG	4 cut(s)	1116, 1242, 1485, 2469
BseBI	CCWGG	7 cut(s)	194, 389, 1096, 1541, 1723, 1751, 2459
BseCI	ATCGAT	1 cut(s)	2367
BseGI	GGATG	6 cut(s)	107, 1896, 1951, 2544, 2584, 2737
BseLI	CCNNNNNNNGG	7 cut(s)	365, 656, 758, 992, 1921, 2226, 2431
BseMI	GCAATG	4 cut(s)	1116, 1242, 1485, 2469
BseMII	CTCAG	6 cut(s)	510, 1166, 1199, 2109, 2651, 2803
BseNI	ACTGG	8 cut(s)	412, 1037, 1215, 1334, 1399, 1670, 1805, 2136
BseRI	GAGGAG	4 cut(s)	1499, 2411, 2414, 2592
BseSI	GKGCMC	5 cut(s)	191, 228, 258, 643, 1878
BseYI	CCCAGC	3 cut(s)	758, 1634, 1793
BsgI	GTGCAG	1 cut(s)	363
Bsh1236I	CGCG	3 cut(s)	90, 1505, 1648
Bsh1285I	CGRYCG	4 cut(s)	58, 88, 398, 1856
BshFI	GGCC	7 cut(s)	256, 1119, 1327, 1918, 2132, 2335, 2843
BshNI	GGYRCC	3 cut(s)	188, 225, 2360
BshVI	ATCGAT	1 cut(s)	2367
BsiEI	CGRYCG	4 cut(s)	58, 88, 398, 1856
BsiHKAI	GWGCWC	4 cut(s)	99, 1402, 1878, 2638
BsiHKCI	CYCGRG	2 cut(s)	98, 2797
BsiSI	CCGG	5 cut(s)	71, 1915, 2720, 2840, 2852
BslFI	GGGAC	2 cut(s)	428, 1811
BslI	CCNNNNNNNGG	7 cut(s)	365, 656, 758, 992, 1921, 2226, 2431
BsmAI	GTCTC	5 cut(s)	767, 1252, 1746, 2402, 2604
BsmFI	GGGAC	2 cut(s)	428, 1811
BsnI	GGCC	7 cut(s)	256, 1119, 1327, 1918, 2132, 2335, 2843
Bso31I	GGTCTC	4 cut(s)	767, 1252, 2402, 2604
BsoBI	CYCGRG	2 cut(s)	98, 2797
Bsp120I	GGGCCC	1 cut(s)	254
Bsp1720I	GCTNAGC	1 cut(s)	2637
Bsp19I	CCATGG	2 cut(s)	43, 111
BspACI	CCGC	7 cut(s)	54, 1503, 1589, 1646, 1648, 2212, 2474
BspANI	GGCC	7 cut(s)	256, 1119, 1327, 1918, 2132, 2335, 2843
BspCNI	CTCAG	6 cut(s)	511, 1167, 1198, 2110, 2650, 2802
BspDI	ATCGAT	1 cut(s)	2367
BspFNI	CGCG	3 cut(s)	90, 1505, 1648
BspMAI	CTGCAG	1 cut(s)	2812
BspMI	ACCTGC	4 cut(s)	837, 919, 1142, 2731
BspOI	GCTAGC	1 cut(s)	1278
BspPI	GGATC	6 cut(s)	110, 123, 712, 1070, 1551, 1626
BspQI	GCTCTTC	3 cut(s)	153, 1386, 1845
BspT107I	GGYRCC	3 cut(s)	188, 225, 2360
BspTI	CTTAAG	1 cut(s)	317
BspTNI	GGTCTC	4 cut(s)	767, 1252, 2402, 2604
BsrBI	CCGCTC	1 cut(s)	54
BsrDI	GCAATG	4 cut(s)	1116, 1242, 1485, 2469
BsrFI	RCCGGY	2 cut(s)	1914, 2719
BsrI	ACTGG	8 cut(s)	412, 1037, 1215, 1334, 1399, 1670, 1805, 2136
BssAI	RCCGGY	2 cut(s)	1914, 2719
BssNI	GRCGYC	2 cut(s)	1642, 2230
BssT1I	CCWWGG	6 cut(s)	43, 111, 643, 1368, 1919, 2058
Bst2UI	CCWGG	7 cut(s)	194, 389, 1096, 1541, 1723, 1751, 2459
Bst4CI	ACNGT	6 cut(s)	621, 1735, 1979, 2039, 2594, 2927
Bst6I	CTCTTC	6 cut(s)	130, 153, 1386, 1683, 1845, 2472
BstACI	GRCGYC	2 cut(s)	1642, 2230
BstAFI	CTTAAG	1 cut(s)	317
BstDEI	CTNAG	7 cut(s)	519, 1175, 1185, 2118, 2430, 2637, 2789
BstDSI	CCRYGG	4 cut(s)	43, 111, 1646, 2155
BstENI	CCTNNNNNAGG	1 cut(s)	2429
BstF5I	GGATG	6 cut(s)	107, 1896, 1951, 2544, 2584, 2737
BstFNI	CGCG	3 cut(s)	90, 1505, 1648
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	3 cut(s)	92, 1376, 1507
BstMAI	GTCTC	5 cut(s)	767, 1252, 1746, 2402, 2604
BstMCI	CGRYCG	4 cut(s)	58, 88, 398, 1856
BstNI	CCWGG	7 cut(s)	194, 389, 1096, 1541, 1723, 1751, 2459
BstNSI	RCATGY	2 cut(s)	2070, 2546
BstSCI	CCNGG	9 cut(s)	69, 192, 387, 1094, 1539, 1721, 1749, 2457, 2850
BstSFI	CTRYAG	2 cut(s)	987, 2808
BstSLI	GKGCMC	5 cut(s)	191, 228, 258, 643, 1878
BstUI	CGCG	3 cut(s)	90, 1505, 1648
BstV2I	GAAGAC	3 cut(s)	39, 1058, 1841
BstX2I	RGATCY	4 cut(s)	115, 704, 1543, 1618
BstXI	CCANNNNNNTGG	1 cut(s)	1887
BstYI	RGATCY	4 cut(s)	115, 704, 1543, 1618
Bsu15I	ATCGAT	1 cut(s)	2367
BsuI	GTATCC	4 cut(s)	1902, 2226, 2476, 2915
BsuRI	GGCC	7 cut(s)	256, 1119, 1327, 1918, 2132, 2335, 2843
BsuTUI	ATCGAT	1 cut(s)	2367
BtgI	CCRYGG	4 cut(s)	43, 111, 1646, 2155
BtrI	CACGTC	1 cut(s)	1406
BtsCI	GGATG	6 cut(s)	107, 1896, 1951, 2544, 2584, 2737
BtsIMutI	CAGTG	6 cut(s)	425, 1172, 1208, 1663, 1731, 2599
BveI	ACCTGC	4 cut(s)	837, 919, 1142, 2731
CaiI	CAGNNNCTG	1 cut(s)	758
CfoI	GCGC	3 cut(s)	92, 1376, 1507
Cfr10I	RCCGGY	2 cut(s)	1914, 2719
Cfr13I	GGNCC	6 cut(s)	254, 255, 617, 647, 2131, 2334
Cfr42I	CCGCGG	1 cut(s)	1649
ClaI	ATCGAT	1 cut(s)	2367
CseI	GACGC	3 cut(s)	1158, 1631, 2219
Csp6I	GTAC	5 cut(s)	555, 622, 1943, 2361, 2872
CspCI	CAANNNNNGTGG	4 cut(s)	2184, 2219, 2248, 2283
CviQI	GTAC	5 cut(s)	555, 622, 1943, 2361, 2872
DdeI	CTNAG	7 cut(s)	519, 1175, 1185, 2118, 2430, 2637, 2789
DriI	GACNNNNNGTC	2 cut(s)	2175, 2596
EaeI	YGGCCR	1 cut(s)	2841
Eam1104I	CTCTTC	6 cut(s)	130, 153, 1386, 1683, 1845, 2472
Eam1105I	GACNNNNNGTC	2 cut(s)	2175, 2596
EarI	CTCTTC	6 cut(s)	130, 153, 1386, 1683, 1845, 2472
Eco130I	CCWWGG	6 cut(s)	43, 111, 643, 1368, 1919, 2058
Eco24I	GRGCYC	3 cut(s)	258, 1270, 2502
Eco31I	GGTCTC	4 cut(s)	767, 1252, 2402, 2604
Eco47I	GGWCC	2 cut(s)	617, 647
Eco57I	CTGAAG	4 cut(s)	2070, 2166, 2210, 2789
Eco88I	CYCGRG	2 cut(s)	98, 2797
EcoNI	CCTNNNNNAGG	1 cut(s)	2429
EcoO109I	RGGNCCY	1 cut(s)	255
EcoRI	GAATTC	3 cut(s)	1036, 1068, 2776
EcoRII	CCWGG	7 cut(s)	192, 387, 1094, 1539, 1721, 1749, 2457
EcoT14I	CCWWGG	6 cut(s)	43, 111, 643, 1368, 1919, 2058
EcoT22I	ATGCAT	1 cut(s)	2544
EcoT38I	GRGCYC	3 cut(s)	258, 1270, 2502
ErhI	CCWWGG	6 cut(s)	43, 111, 643, 1368, 1919, 2058
FalI	AAGNNNNNCTT	2 cut(s)	2423, 2455
FaqI	GGGAC	2 cut(s)	428, 1811
FauI	CCCGC	1 cut(s)	1582
FbaI	TGATCA	1 cut(s)	894
FblI	GTMKAC	1 cut(s)	78
FokI	GGATG	6 cut(s)	94, 1883, 1938, 2551, 2591, 2744
FriOI	GRGCYC	3 cut(s)	258, 1270, 2502
GlaI	GCGC	3 cut(s)	91, 1375, 1506
GsaI	CCCAGC	3 cut(s)	762, 1638, 1797
GsuI	CTGGAG	1 cut(s)	1687
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	7 cut(s)	256, 1119, 1327, 1918, 2132, 2335, 2843
HapII	CCGG	5 cut(s)	71, 1915, 2720, 2840, 2852
HgaI	GACGC	3 cut(s)	1158, 1631, 2219
HhaI	GCGC	3 cut(s)	92, 1376, 1507
Hin1I	GRCGYC	2 cut(s)	1642, 2230
Hin6I	GCGC	3 cut(s)	90, 1374, 1505
HinP1I	GCGC	3 cut(s)	90, 1374, 1505
HincII	GTYRAC	2 cut(s)	79, 304
HindII	GTYRAC	2 cut(s)	79, 304
HindIII	AAGCTT	3 cut(s)	162, 1286, 2437
HinfI	GANTC	7 cut(s)	266, 293, 521, 996, 1016, 1219, 2612
HpaII	CCGG	5 cut(s)	71, 1915, 2720, 2840, 2852
HphI	GGTGA	7 cut(s)	149, 376, 380, 1652, 1817, 2042, 2218
Hpy166II	GTNNAC	8 cut(s)	79, 157, 304, 555, 617, 821, 1597, 1876
Hpy8I	GTNNAC	8 cut(s)	79, 157, 304, 555, 617, 821, 1597, 1876
Hpy99I	CGWCG	4 cut(s)	17, 83, 86, 2235
HpyCH4III	ACNGT	6 cut(s)	621, 1735, 1979, 2039, 2594, 2927
HpyCH4IV	ACGT	3 cut(s)	15, 201, 1405
HpyF3I	CTNAG	7 cut(s)	519, 1175, 1185, 2118, 2430, 2637, 2789
HpySE526I	ACGT	3 cut(s)	15, 201, 1405
Hsp92I	GRCGYC	2 cut(s)	1642, 2230
HspAI	GCGC	3 cut(s)	90, 1374, 1505
KpnI	GGTACC	1 cut(s)	2364
KroI	GCCGGC	1 cut(s)	1914
KroNI	GCCGGC	1 cut(s)	1916
Ksp22I	TGATCA	1 cut(s)	894
KspI	CCGCGG	1 cut(s)	1649
LguI	GCTCTTC	3 cut(s)	153, 1386, 1845
LmnI	GCTCC	8 cut(s)	722, 1265, 1405, 1512, 1636, 1668, 1685, 1862
LweI	GCATC	8 cut(s)	202, 1618, 1788, 2044, 2199, 2479, 2529, 2687
MaeII	ACGT	3 cut(s)	15, 201, 1405
MaeIII	GTNAC	8 cut(s)	522, 850, 997, 1135, 1170, 2030, 2560, 2938
MbiI	CCGCTC	1 cut(s)	54
MfeI	CAATTG	1 cut(s)	585
MflI	RGATCY	4 cut(s)	115, 704, 1543, 1618
MlyI	GAGTC	4 cut(s)	530, 1005, 1010, 1213
MmeI	TCCRAC	2 cut(s)	637, 1855
Mph1103I	ATGCAT	1 cut(s)	2544
MroNI	GCCGGC	1 cut(s)	1914
MseI	TTAA	4 cut(s)	318, 786, 1449, 2277
MslI	CAYNNNNRTG	2 cut(s)	1736, 2204
MspA1I	CMGCKG	3 cut(s)	755, 1638, 1648
MspCI	CTTAAG	1 cut(s)	317
MspI	CCGG	5 cut(s)	71, 1915, 2720, 2840, 2852
MspR9I	CCNGG	9 cut(s)	71, 194, 389, 1096, 1541, 1723, 1751, 2459, 2852
MunI	CAATTG	1 cut(s)	585
MvaI	CCWGG	7 cut(s)	194, 389, 1096, 1541, 1723, 1751, 2459
MvnI	CGCG	3 cut(s)	90, 1505, 1648
NaeI	GCCGGC	1 cut(s)	1916
NciI	CCSGG	2 cut(s)	71, 2852
NcoI	CCATGG	2 cut(s)	43, 111
NgoMIV	GCCGGC	1 cut(s)	1914
NheI	GCTAGC	1 cut(s)	1274
NmuCI	GTSAC	6 cut(s)	522, 850, 997, 1135, 1170, 2030
NsiI	ATGCAT	1 cut(s)	2544
NspI	RCATGY	2 cut(s)	2070, 2546
OliI	CACNNNNGTG	1 cut(s)	1736
PaeI	GCATGC	2 cut(s)	2070, 2546
PaeR7I	CTCGAG	2 cut(s)	98, 2797
PaqCI	CACCTGC	2 cut(s)	919, 2731
PasI	CCCWGGG	1 cut(s)	388
PciSI	GCTCTTC	3 cut(s)	153, 1386, 1845
PcsI	WCGNNNNNNNCGW	3 cut(s)	90, 1524, 1849
PdiI	GCCGGC	1 cut(s)	1916
PfeI	GAWTC	3 cut(s)	266, 293, 2612
PflMI	CCANNNNNTGG	2 cut(s)	656, 758
PfoI	TCCNGGA	1 cut(s)	1094
Ple19I	CGATCG	2 cut(s)	88, 1856
PleI	GAGTC	4 cut(s)	529, 1004, 1010, 1213
PpsI	GAGTC	4 cut(s)	529, 1004, 1010, 1213
PshBI	ATTAAT	1 cut(s)	2277
Psp6I	CCWGG	7 cut(s)	192, 387, 1094, 1539, 1721, 1749, 2457
PspFI	CCCAGC	3 cut(s)	758, 1634, 1793
PspGI	CCWGG	7 cut(s)	192, 387, 1094, 1539, 1721, 1749, 2457
PspOMI	GGGCCC	1 cut(s)	254
PspPI	GGNCC	6 cut(s)	254, 255, 617, 647, 2131, 2334
PstI	CTGCAG	1 cut(s)	2812
PstNI	CAGNNNCTG	1 cut(s)	758
PsuI	RGATCY	4 cut(s)	115, 704, 1543, 1618
PvuI	CGATCG	2 cut(s)	88, 1856
PvuII	CAGCTG	2 cut(s)	755, 1638
RsaI	GTAC	5 cut(s)	556, 623, 1944, 2362, 2873
RsaNI	GTAC	5 cut(s)	555, 622, 1943, 2361, 2872
RseI	CAYNNNNRTG	2 cut(s)	1736, 2204
SacII	CCGCGG	1 cut(s)	1649
SalI	GTCGAC	1 cut(s)	77
SapI	GCTCTTC	3 cut(s)	153, 1386, 1845
SaqAI	TTAA	4 cut(s)	318, 786, 1449, 2277
Sau96I	GGNCC	6 cut(s)	254, 255, 617, 647, 2131, 2334
SchI	GAGTC	4 cut(s)	530, 1005, 1010, 1213
ScrFI	CCNGG	9 cut(s)	71, 194, 389, 1096, 1541, 1723, 1751, 2459, 2852
SfaNI	GCATC	8 cut(s)	202, 1618, 1788, 2044, 2199, 2479, 2529, 2687
SfcI	CTRYAG	2 cut(s)	987, 2808
Sfr274I	CTCGAG	2 cut(s)	98, 2797
Sfr303I	CCGCGG	1 cut(s)	1649
SgrBI	CCGCGG	1 cut(s)	1649
SinI	GGWCC	2 cut(s)	617, 647
SlaI	CTCGAG	2 cut(s)	98, 2797
SmiMI	CAYNNNNRTG	2 cut(s)	1736, 2204
SmlI	CTYRAG	7 cut(s)	98, 170, 317, 1006, 2501, 2604, 2797
SmoI	CTYRAG	7 cut(s)	98, 170, 317, 1006, 2501, 2604, 2797
SphI	GCATGC	2 cut(s)	2070, 2546
SsiI	CCGC	7 cut(s)	54, 1503, 1589, 1646, 1648, 2212, 2474
SspI	AATATT	1 cut(s)	376
StyD4I	CCNGG	9 cut(s)	69, 192, 387, 1094, 1539, 1721, 1749, 2457, 2850
StyI	CCWWGG	6 cut(s)	43, 111, 643, 1368, 1919, 2058
TaaI	ACNGT	6 cut(s)	621, 1735, 1979, 2039, 2594, 2927
TaiI	ACGT	3 cut(s)	18, 204, 1408
TaqI	TCGA	6 cut(s)	78, 99, 484, 1852, 2367, 2798
TaqII	GACCGA	3 cut(s)	302, 412, 1152
TatI	WGTACW	2 cut(s)	554, 2871
TfiI	GAWTC	3 cut(s)	266, 293, 2612
Tru1I	TTAA	4 cut(s)	318, 786, 1449, 2277
Tru9I	TTAA	4 cut(s)	318, 786, 1449, 2277
TscAI	CASTG	6 cut(s)	432, 1179, 1215, 1670, 1738, 2599
TseFI	GTSAC	6 cut(s)	522, 850, 997, 1135, 1170, 2030
Tsp45I	GTSAC	6 cut(s)	522, 850, 997, 1135, 1170, 2030
TspDTI	ATGAA	8 cut(s)	528, 620, 1330, 1997, 2582, 2625, 2684, 2748
TspGWI	ACGGA	2 cut(s)	2144, 2261
TspRI	CASTG	6 cut(s)	432, 1179, 1215, 1670, 1738, 2599
Van91I	CCANNNNNTGG	2 cut(s)	656, 758
Vha464I	CTTAAG	1 cut(s)	317
VneI	GTGCAC	1 cut(s)	1874
VpaK11BI	GGWCC	2 cut(s)	617, 647
VspI	ATTAAT	1 cut(s)	2277
XagI	CCTNNNNNAGG	1 cut(s)	2429
XapI	RAATTY	6 cut(s)	1036, 1068, 1099, 1655, 2250, 2776
XbaI	TCTAGA	2 cut(s)	1624, 2023
XceI	RCATGY	2 cut(s)	2070, 2546
XhoI	CTCGAG	2 cut(s)	98, 2797
XmiI	GTMKAC	1 cut(s)	78
Zsp2I	ATGCAT	1 cut(s)	2544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.