Prupe.4G168200_v2.0.a1

protein At3g15000, mitochondrial-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9775910 .. 9779313
3404 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G168200.1

Sequence Viewer

Length: 1206 bp
ATGGCGACCCATTTCTTCTCTCGCTCTCTTCCCAAAACCCTAGCCATGAGCTCCTTCCTCTCTCGCTCTCTATCCACGGCCACCTCCGCTGCTTTCCTATCCACCGCCCAATCTCGCTCTTCTCTCTCTCTGTTCCACCGCCTTCGTCCCCTCGCTGGATTCGTCGCCTCCGCCGGTAAGCTCTCTCCTGCGTCCGTCGGGTGCTTCTCGACCAACTCGACGACGTCGTCGCTTAGAGATCCAAACCCTAACTGGTCGAACCGGCCTCCCAAGGAGACGATCCTCCTCGATGGGTGTGACTTTGAGCACTGGCTGGTCGTCATGGATCCGCCTGAGGGTGATATCACCAGGGATGAGATCATCGATAGCTACATCAAGACCCTAGCTGCGGTCGTCGGAAGTGAGGAAGAAGCAAGGATGAAGATCTACTCAGTTTCAACTAGGTGCTATTATGCATTTGGGGCACTTGTGTCTGAAGAGACTTCGTACAAAATCAAAGAATTGCCTAAAGTCCGGTGGGTACTTCCTGATTCTTACTTGGATGTTAAGAACAAAGATTATGGAGGCGAACCTTTTATTAATGGTGAAGCAGTACCATATGATCCCAAGTACCATGAGGAATGGATAAGAAACAATAGCCGAGCAAACGAGAGAAACAGACGCAATGACAGACCTCGAAATTATGACAGATCAAGGAACTTTGATAGGAGGAGGGAAAATATGCAGAACCGAGATTTTCAGAACAGGGGTCAGCCTCCTATGCCTAATCAAGCTGGGCAAAATCCTGGGCCTAACATGCCTGGACCTGCCAACAACATGAGGACTCCCAACAATATGGGCCCCCCGCCCCCCAACACGGGTCCAATGCCTCCCCACAACATGGGTCCAAACTACAGTAATGTGCAGCAGCCAAACAACTGGAGTGGTGGCCAGCCCAACAACAATAGCAATCAGATGCCTCATAATTATAATCAGATGCCGCCGCCACCGCCTAACTACAATCAGATGCCCCCCAACAACATGGGAGGTGTGCCACCAAACAACATGAGAGGGATGCCACCAAACAACATGGGAGGAGTGCCCCCACCACCAAATAACATGGGAGGTCCACCGCCTAATGCAGGATGGGGGAGTCCTGGGCAATACCAAGATAACTACACACCAGGCAGGGACGATGGAGGCATCCCCGGTACAAACCGTTACTGA

Protein Analysis

402

Amino Acids

44.58

Weight (kDa)

9.13

Isoelectric Point (pI)

59.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 969
AasI GACNNNNNNGTC 1 cut(s) 226
AatII GACGTC 1 cut(s) 227
Acc36I ACCTGC 1 cut(s) 814
AccB7I CCANNNNNTGG 1 cut(s) 880
AclWI GGATC 5 cut(s) 233, 274, 320, 333, 596
AcoI YGGCCR 2 cut(s) 78, 928
AcuI CTGAAG 1 cut(s) 495
AcyI GRCGYC 1 cut(s) 224
AfaI GTAC 5 cut(s) 488, 522, 594, 611, 1192
AfiI CCNNNNNNNGG 7 cut(s) 155, 335, 388, 856, 857, 880, 1121
AgsI TTSAA 1 cut(s) 438
AjnI CCWGG 5 cut(s) 347, 784, 799, 1135, 1162
AluBI AGCT 5 cut(s) 51, 181, 369, 386, 773
AluI AGCT 5 cut(s) 51, 181, 369, 386, 773
Alw21I GWGCWC 2 cut(s) 53, 309
Alw26I GTCTC 2 cut(s) 269, 473
AlwI GGATC 5 cut(s) 233, 274, 320, 333, 596
AoxI GGCC 5 cut(s) 78, 263, 788, 838, 928
ApaI GGGCCC 1 cut(s) 842
ApeKI GCWGC 4 cut(s) 89, 386, 904, 907
AseI ATTAAT 1 cut(s) 579
AspS9I GGNCC 7 cut(s) 788, 803, 838, 839, 860, 884, 1106
AsuC2I CCSGG 1 cut(s) 1188
AsuHPI GGTGA 3 cut(s) 337, 350, 596
AvaII GGWCC 4 cut(s) 803, 860, 884, 1106
AxyI CCTNAGG 1 cut(s) 333
BaeGI GKGCMC 3 cut(s) 466, 842, 1083
BalI TGGCCA 1 cut(s) 930
BamHI GGATCC 1 cut(s) 325
BanII GRGCYC 2 cut(s) 53, 842
Bbv12I GWGCWC 2 cut(s) 53, 309
BbvI GCAGC 4 cut(s) 76, 373, 916, 919
BccI CCATC 3 cut(s) 284, 1119, 1169
BceAI ACGGC 1 cut(s) 93
BciT130I CCWGG 5 cut(s) 349, 786, 801, 1137, 1164
BcnI CCSGG 1 cut(s) 1188
BcoDI GTCTC 2 cut(s) 269, 473
BfaI CTAG 3 cut(s) 41, 383, 441
BfmI CTRYAG 1 cut(s) 892
BfuAI ACCTGC 1 cut(s) 814
BglII AGATCT 1 cut(s) 423
BisI GCNGC 6 cut(s) 90, 387, 905, 908, 980, 983
BlsI GCNGC 6 cut(s) 91, 388, 906, 909, 981, 984
Bme1390I CCNGG 6 cut(s) 349, 786, 801, 1137, 1164, 1188
Bme18I GGWCC 4 cut(s) 803, 860, 884, 1106
BmgT120I GGNCC 7 cut(s) 788, 803, 838, 839, 860, 884, 1106
BmiI GGNNCC 5 cut(s) 327, 840, 841, 861, 885
BmrFI CCNGG 6 cut(s) 349, 786, 801, 1137, 1164, 1188
BmsI GCATC 5 cut(s) 945, 966, 996, 1044, 1191
BpmI CTGGAG 1 cut(s) 940
BpuMI CCSGG 1 cut(s) 1188
Bsa29I ATCGAT 1 cut(s) 363
BsaBI GATNNNNATC 1 cut(s) 422
BsaHI GRCGYC 1 cut(s) 224
BsaJI CCNNGG 6 cut(s) 75, 270, 348, 785, 1136, 1186
BsaWI WCCGGW 1 cut(s) 513
Bsc4I CCNNNNNNNGG 7 cut(s) 155, 335, 388, 856, 857, 880, 1121
Bse118I RCCGGY 2 cut(s) 173, 261
Bse1I ACTGG 3 cut(s) 257, 314, 923
Bse21I CCTNAGG 1 cut(s) 333
Bse3DI GCAATG 1 cut(s) 670
Bse8I GATNNNNATC 1 cut(s) 422
BseBI CCWGG 5 cut(s) 349, 786, 801, 1137, 1164
BseCI ATCGAT 1 cut(s) 363
BseDI CCNNGG 6 cut(s) 75, 270, 348, 785, 1136, 1186
BseGI GGATG 6 cut(s) 358, 423, 547, 1059, 1130, 1182
BseJI GATNNNNATC 1 cut(s) 422
BseLI CCNNNNNNNGG 7 cut(s) 155, 335, 388, 856, 857, 880, 1121
BseMI GCAATG 1 cut(s) 670
BseMII CTCAG 2 cut(s) 324, 444
BseNI ACTGG 3 cut(s) 257, 314, 923
BseRI GAGGAG 3 cut(s) 275, 724, 1089
BseSI GKGCMC 3 cut(s) 466, 842, 1083
BseXI GCAGC 4 cut(s) 76, 373, 916, 919
BseYI CCCAGC 1 cut(s) 773
BsgI GTGCAG 1 cut(s) 923
Bsh1285I CGRYCG 1 cut(s) 393
BshFI GGCC 5 cut(s) 80, 265, 790, 840, 930
BshVI ATCGAT 1 cut(s) 363
BsiEI CGRYCG 1 cut(s) 393
BsiHKAI GWGCWC 2 cut(s) 53, 309
BsiSI CCGG 4 cut(s) 174, 262, 514, 1188
BslFI GGGAC 2 cut(s) 132, 1184
BslI CCNNNNNNNGG 7 cut(s) 155, 335, 388, 856, 857, 880, 1121
BsmAI GTCTC 2 cut(s) 269, 473
BsmBI CGTCTC 1 cut(s) 269
BsmFI GGGAC 2 cut(s) 132, 1184
BsnI GGCC 5 cut(s) 80, 265, 790, 840, 930
Bsp120I GGGCCC 1 cut(s) 838
Bsp1286I GDGCHC 5 cut(s) 53, 309, 466, 842, 1083
Bsp143I GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
BspANI GGCC 5 cut(s) 80, 265, 790, 840, 930
BspCNI CTCAG 2 cut(s) 325, 443
BspDI ATCGAT 1 cut(s) 363
BspLI GGNNCC 5 cut(s) 327, 840, 841, 861, 885
BspMI ACCTGC 1 cut(s) 814
BspPI GGATC 5 cut(s) 233, 274, 320, 333, 596
BspQI GCTCTTC 1 cut(s) 124
BsrDI GCAATG 1 cut(s) 670
BsrFI RCCGGY 2 cut(s) 173, 261
BsrI ACTGG 3 cut(s) 257, 314, 923
BssAI RCCGGY 2 cut(s) 173, 261
BssECI CCNNGG 6 cut(s) 75, 270, 348, 785, 1136, 1186
BssMI GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
BssNI GRCGYC 1 cut(s) 224
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 5 cut(s) 349, 786, 801, 1137, 1164
Bst4CI ACNGT 2 cut(s) 896, 1199
Bst6I CTCTTC 3 cut(s) 33, 124, 471
BstACI GRCGYC 1 cut(s) 224
BstC8I GCNNGC 1 cut(s) 932
BstDEI CTNAG 3 cut(s) 233, 333, 430
BstDSI CCRYGG 1 cut(s) 75
BstENI CCTNNNNNAGG 1 cut(s) 1119
BstF5I GGATG 6 cut(s) 358, 423, 547, 1059, 1130, 1182
BstKTI GATC 7 cut(s) 241, 282, 328, 360, 426, 604, 692
BstMAI GTCTC 2 cut(s) 269, 473
BstMBI GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
BstMCI CGRYCG 1 cut(s) 393
BstMWI GCNNNNNNNGC 5 cut(s) 86, 461, 760, 796, 988
BstNI CCWGG 5 cut(s) 349, 786, 801, 1137, 1164
BstNSI RCATGY 1 cut(s) 799
BstSCI CCNGG 6 cut(s) 347, 784, 799, 1135, 1162, 1186
BstSFI CTRYAG 1 cut(s) 892
BstSLI GKGCMC 3 cut(s) 466, 842, 1083
BstV1I GCAGC 4 cut(s) 76, 373, 916, 919
BstX2I RGATCY 3 cut(s) 238, 325, 423
BstXI CCANNNNNNTGG 3 cut(s) 835, 918, 1021
BstYI RGATCY 3 cut(s) 238, 325, 423
Bsu15I ATCGAT 1 cut(s) 363
Bsu36I CCTNAGG 1 cut(s) 333
BsuRI GGCC 5 cut(s) 80, 265, 790, 840, 930
BsuTUI ATCGAT 1 cut(s) 363
BtgI CCRYGG 1 cut(s) 75
BtsCI GGATG 6 cut(s) 358, 423, 547, 1059, 1130, 1182
BtsIMutI CAGTG 1 cut(s) 307
BveI ACCTGC 1 cut(s) 814
Cac8I GCNNGC 1 cut(s) 932
Cfr10I RCCGGY 2 cut(s) 173, 261
Cfr13I GGNCC 7 cut(s) 788, 803, 838, 839, 860, 884, 1106
ClaI ATCGAT 1 cut(s) 363
CseI GACGC 2 cut(s) 180, 669
Csp6I GTAC 5 cut(s) 487, 521, 593, 610, 1191
CspCI CAANNNNNGTGG 2 cut(s) 904, 939
CviQI GTAC 5 cut(s) 487, 521, 593, 610, 1191
DdeI CTNAG 3 cut(s) 233, 333, 430
DpnI GATC 7 cut(s) 240, 281, 327, 359, 425, 603, 691
DpnII GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
DrdI GACNNNNNNGTC 1 cut(s) 226
DseDI GACNNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 2 cut(s) 78, 928
Eam1104I CTCTTC 3 cut(s) 33, 124, 471
EarI CTCTTC 3 cut(s) 33, 124, 471
EciI GGCGGA 2 cut(s) 160, 318
Ecl136II GAGCTC 1 cut(s) 51
Eco130I CCWWGG 1 cut(s) 270
Eco24I GRGCYC 2 cut(s) 53, 842
Eco32I GATATC 1 cut(s) 343
Eco47I GGWCC 4 cut(s) 803, 860, 884, 1106
Eco53kI GAGCTC 1 cut(s) 51
Eco57I CTGAAG 1 cut(s) 495
Eco81I CCTNAGG 1 cut(s) 333
EcoICRI GAGCTC 1 cut(s) 51
EcoNI CCTNNNNNAGG 1 cut(s) 1119
EcoO109I RGGNCCY 1 cut(s) 839
EcoRII CCWGG 5 cut(s) 347, 784, 799, 1135, 1162
EcoRV GATATC 1 cut(s) 343
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 1 cut(s) 457
EcoT38I GRGCYC 2 cut(s) 53, 842
ErhI CCWWGG 1 cut(s) 270
Esp3I CGTCTC 1 cut(s) 269
FaqI GGGAC 2 cut(s) 132, 1184
FauI CCCGC 1 cut(s) 852
FauNDI CATATG 1 cut(s) 598
Fnu4HI GCNGC 6 cut(s) 90, 387, 905, 908, 980, 983
FokI GGATG 6 cut(s) 365, 430, 554, 1066, 1137, 1169
FriOI GRGCYC 2 cut(s) 53, 842
Fsp4HI GCNGC 6 cut(s) 90, 387, 905, 908, 980, 983
FspBI CTAG 3 cut(s) 41, 383, 441
GluI GCNGC 6 cut(s) 90, 387, 905, 908, 980, 983
GsaI CCCAGC 1 cut(s) 777
GsuI CTGGAG 1 cut(s) 940
HaeIII GGCC 5 cut(s) 80, 265, 790, 840, 930
HapII CCGG 4 cut(s) 174, 262, 514, 1188
HgaI GACGC 2 cut(s) 180, 669
Hin1I GRCGYC 1 cut(s) 224
HinfI GANTC 4 cut(s) 159, 530, 823, 1132
HpaII CCGG 4 cut(s) 174, 262, 514, 1188
HphI GGTGA 3 cut(s) 337, 350, 596
Hpy166II GTNNAC 1 cut(s) 1109
Hpy188I TCNGA 6 cut(s) 398, 475, 741, 954, 975, 1005
Hpy188III TCNNGA 3 cut(s) 208, 376, 527
Hpy8I GTNNAC 1 cut(s) 1109
Hpy99I CGWCG 7 cut(s) 167, 200, 223, 226, 229, 232, 398
HpyAV CCTTC 2 cut(s) 64, 152
HpyCH4III ACNGT 2 cut(s) 896, 1199
HpyCH4IV ACGT 1 cut(s) 224
HpyCH4V TGCA 4 cut(s) 455, 724, 904, 1121
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 461, 760, 796, 988
HpyF3I CTNAG 3 cut(s) 233, 333, 430
HpySE526I ACGT 1 cut(s) 224
Hsp92I GRCGYC 1 cut(s) 224
Kzo9I GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
LguI GCTCTTC 1 cut(s) 124
LmnI GCTCC 1 cut(s) 56
Lsp1109I GCAGC 4 cut(s) 76, 373, 916, 919
LweI GCATC 5 cut(s) 945, 966, 996, 1044, 1191
MaeI CTAG 3 cut(s) 41, 383, 441
MaeII ACGT 1 cut(s) 224
MaeIII GTNAC 2 cut(s) 296, 1199
MalI GATC 7 cut(s) 240, 281, 327, 359, 425, 603, 691
MboI GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
MboII GAAGA 6 cut(s) 7, 20, 111, 419, 433, 488
MflI RGATCY 3 cut(s) 238, 325, 423
MhlI GDGCHC 5 cut(s) 53, 309, 466, 842, 1083
MlsI TGGCCA 1 cut(s) 930
MluCI AATT 3 cut(s) 500, 679, 964
MluNI TGGCCA 1 cut(s) 930
MlyI GAGTC 2 cut(s) 817, 1141
MmeI TCCRAC 1 cut(s) 376
Mox20I TGGCCA 1 cut(s) 930
Mph1103I ATGCAT 1 cut(s) 457
MscI TGGCCA 1 cut(s) 930
MseI TTAA 2 cut(s) 546, 579
Msp20I TGGCCA 1 cut(s) 930
MspA1I CMGCKG 1 cut(s) 89
MspI CCGG 4 cut(s) 174, 262, 514, 1188
MspR9I CCNGG 6 cut(s) 349, 786, 801, 1137, 1164, 1188
MvaI CCWGG 5 cut(s) 349, 786, 801, 1137, 1164
MwoI GCNNNNNNNGC 5 cut(s) 86, 461, 760, 796, 988
NciI CCSGG 1 cut(s) 1188
NdeI CATATG 1 cut(s) 598
NdeII GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
NlaIV GGNNCC 5 cut(s) 327, 840, 841, 861, 885
NmeAIII GCCGAG 1 cut(s) 665
NmuCI GTSAC 1 cut(s) 296
NsiI ATGCAT 1 cut(s) 457
NspI RCATGY 1 cut(s) 799
PciSI GCTCTTC 1 cut(s) 124
PcsI WCGNNNNNNNCGW 3 cut(s) 159, 215, 224
PfeI GAWTC 2 cut(s) 159, 530
PflFI GACNNNGTC 2 cut(s) 223, 226
PflMI CCANNNNNTGG 1 cut(s) 880
PkrI GCNGC 6 cut(s) 91, 388, 906, 909, 981, 984
PleI GAGTC 2 cut(s) 817, 1140
PpsI GAGTC 2 cut(s) 817, 1140
PshBI ATTAAT 1 cut(s) 579
PsiI TTATAA 1 cut(s) 969
Psp124BI GAGCTC 1 cut(s) 53
Psp6I CCWGG 5 cut(s) 347, 784, 799, 1135, 1162
PspFI CCCAGC 1 cut(s) 773
PspGI CCWGG 5 cut(s) 347, 784, 799, 1135, 1162
PspN4I GGNNCC 5 cut(s) 327, 840, 841, 861, 885
PspOMI GGGCCC 1 cut(s) 838
PspPI GGNCC 7 cut(s) 788, 803, 838, 839, 860, 884, 1106
PsuI RGATCY 3 cut(s) 238, 325, 423
PsyI GACNNNGTC 2 cut(s) 223, 226
RsaI GTAC 5 cut(s) 488, 522, 594, 611, 1192
RsaNI GTAC 5 cut(s) 487, 521, 593, 610, 1191
SacI GAGCTC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 124
SaqAI TTAA 2 cut(s) 546, 579
SatI GCNGC 6 cut(s) 90, 387, 905, 908, 980, 983
Sau3AI GATC 7 cut(s) 238, 279, 325, 357, 423, 601, 689
Sau96I GGNCC 7 cut(s) 788, 803, 838, 839, 860, 884, 1106
SchI GAGTC 2 cut(s) 817, 1141
ScrFI CCNGG 6 cut(s) 349, 786, 801, 1137, 1164, 1188
SduI GDGCHC 5 cut(s) 53, 309, 466, 842, 1083
SfaNI GCATC 5 cut(s) 945, 966, 996, 1044, 1191
SfcI CTRYAG 1 cut(s) 892
SinI GGWCC 4 cut(s) 803, 860, 884, 1106
Sse9I AATT 3 cut(s) 500, 679, 964
SspMI CTAG 3 cut(s) 41, 383, 441
SstI GAGCTC 1 cut(s) 53
StyD4I CCNGG 6 cut(s) 347, 784, 799, 1135, 1162, 1186
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 2 cut(s) 896, 1199
TaiI ACGT 1 cut(s) 227
TaqI TCGA 6 cut(s) 209, 218, 257, 288, 363, 676
TasI AATT 3 cut(s) 500, 679, 964
TauI GCSGC 2 cut(s) 982, 985
TfiI GAWTC 2 cut(s) 159, 530
Tru1I TTAA 2 cut(s) 546, 579
Tru9I TTAA 2 cut(s) 546, 579
TscAI CASTG 1 cut(s) 314
TseFI GTSAC 1 cut(s) 296
TseI GCWGC 4 cut(s) 89, 386, 904, 907
Tsp45I GTSAC 1 cut(s) 296
TspDTI ATGAA 1 cut(s) 434
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 1 cut(s) 314
Tth111I GACNNNGTC 2 cut(s) 223, 226
Van91I CCANNNNNTGG 1 cut(s) 880
VpaK11BI GGWCC 4 cut(s) 803, 860, 884, 1106
VspI ATTAAT 1 cut(s) 579
XagI CCTNNNNNAGG 1 cut(s) 1119
XceI RCATGY 1 cut(s) 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 249
XspI CTAG 3 cut(s) 41, 383, 441
ZraI GACGTC 1 cut(s) 225
Zsp2I ATGCAT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.