Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0008211

Physical Location & Seq

Genomic Coordinates Reverse (-)

9011205 .. 9015718

Gene Structure 4514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G076100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1128 bp

ATGTTTGAAATGCAGGTTTTGGATAACTATACGGAGAAGATGAATACTTTTTCACATGTACCCCCGGGCTTTAGATTCCACCCCACGGATGAAGAACTTGTCGATTATTATCTTAGAAAGAAGATTGCTTCAAAAAGGATTGACCTTGATGTCATCAAAGATGTTGATCTTTATAAGATTGAGCCGTGGGACCTTCAAGAATTGTGCAAAATAGGAACTGATGATCAGAATGAATGGTACTTTTTTAGCCACAAAGACAAGAAGTACCCTACTGGAACTCGAACCAATAGGGCAACAAAAGCCGGATTCTGGAAAGCTACAGGAAGAGATAAGGCTATTTACTCAAGGAACATCCTCATTGGCATGAGAAAGACCTTAGTCTTTTACAAAGGCCGTGCTCCAAATGGACAAAAGTCAGATTGGATCATGCATGAGTATCGACTAGAAACTAGTGAGAATGGAACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGGGTGTTCAAGAAGAGATTGGCAACAGTGAGGAAAATGGGTGATTACGAGTCACCATGTTGGTATGACCAAGTCTCATTCATGCCAGAACTTGAGTCTCCAAGGAGATCAATTTCTCACCCTTATGCCTCACCATATCACCAGCAGCAGCAGCACTATTCCCAGTGCAAACAAGAGCTTGATTTGCAGTACAACATGCCACATCATCACCACCATGATTCTTTCCTCCAGCTCCCTCAATTAGAAAGCCCCAAGGTTCCTCAGTCAGCCCCATATGGTTCAATGTTGCAGTCTTCCACACTCACACAAGAGGAGCAATTGCAGCAGCACATCAATCAGCAGCAAAACATGTTCAACTCATCGTCATCGTCATTGATGCTTTACAACAATAATGATCAGCAATCTGTTGATCAGGTGACCGATTGGCGTGTGCTCGACAAGTTTGTTGCGTCACAGCTGAGCCAGGACCAGCAAGATGCTTCCAAGGAAGTTACAAATTACTCCAATGCAGCATCAATGTTTCATGTGGCCAACATGCTGGCCAATGAGTCTTCCAGAAGGCCAGACAATGAAAATTTGGGGCGGGACTATGCCTCAACATCCACCTCTAGTTGCCAAATTGATCTGTGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009987 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043565 GO:0044087 GO:0044089 GO:0048518 GO:0048522 GO:0048759 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901348 GO:1901363 GO:1903338 GO:1903340 GO:1903506 GO:1905177 GO:2000112 GO:2000652 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

376

Amino Acids

43.95

Weight (kDa)

6.28

Isoelectric Point (pI)

62.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008211)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12260 AT1G12260 AT1G62700 AT1G62700
fragaria_vesca	FvH4_5g00350 FvH4_5g00351
malus_domestica	MD00G1117000.v1.1 MD00G1146200.v1.1
prunus_persica	Prupe.5G076100_v2.0.a1 Prupe.5G076100_v2.0.a1
pyrus_communis	pycom04g07440 pycom06g05780
rosa_chinensis	RchiOBHm_Chr7g0202191 RchiOBHm_Chr7g0202201
rosa_laevigata	RLG00000003617
rosa_multiflora	Rmu_sc0005017.1_g000005
rosa_roxburghii	Rroxscaffold_3G00254750
rosa_rugosa	Rorug07G0068900
rosa_samantha	Rh7AG196200 Rh7BG197500 Rh7CG207400 Rh7DG202900
rosa_wichuraiana	Rw7G017180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	174
AasI	GACNNNNNNGTC	1 cut(s)	149
Acc36I	ACCTGC	1 cut(s)	4
AciI	CCGC	1 cut(s)	1075
AclWI	GGATC	1 cut(s)	431
AcoI	YGGCCR	2 cut(s)	1020, 1032
AcsI	RAATTY	1 cut(s)	1066
AfaI	GTAC	4 cut(s)	60, 239, 266, 683
AfiI	CCNNNNNNNGG	2 cut(s)	85, 309
AflIII	ACRYGT	2 cut(s)	55, 840
AgsI	TTSAA	6 cut(s)	8, 132, 197, 502, 774, 847
AhlI	ACTAGT	1 cut(s)	449
AjnI	CCWGG	1 cut(s)	954
AluBI	AGCT	4 cut(s)	317, 670, 724, 949
AluI	AGCT	4 cut(s)	317, 670, 724, 949
Alw21I	GWGCWC	2 cut(s)	400, 927
Alw26I	GTCTC	2 cut(s)	571, 594
AlwI	GGATC	1 cut(s)	431
Ama87I	CYCGRG	1 cut(s)	64
AoxI	GGCC	4 cut(s)	391, 1020, 1032, 1052
ApeKI	GCWGC	7 cut(s)	637, 640, 643, 814, 817, 832, 1001
ApoI	RAATTY	1 cut(s)	1066
AspS9I	GGNCC	2 cut(s)	190, 958
AsuC2I	CCSGG	2 cut(s)	65, 66
AsuHPI	GGTGA	7 cut(s)	537, 545, 602, 615, 623, 692, 919
AvaI	CYCGRG	1 cut(s)	64
AvaII	GGWCC	2 cut(s)	190, 958
AxyI	CCTNAGG	1 cut(s)	468
BalI	TGGCCA	2 cut(s)	1022, 1034
BbsI	GAAGAC	2 cut(s)	777, 1035
Bbv12I	GWGCWC	2 cut(s)	400, 927
BbvI	GCAGC	7 cut(s)	649, 652, 655, 826, 829, 844, 1013
BccI	CCATC	1 cut(s)	474
BceAI	ACGGC	2 cut(s)	169, 378
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	1 cut(s)	956
BclI	TGATCA	3 cut(s)	223, 886, 901
BcnI	CCSGG	2 cut(s)	65, 66
BcoDI	GTCTC	2 cut(s)	571, 594
BcuI	ACTAGT	1 cut(s)	449
BfaI	CTAG	3 cut(s)	443, 450, 1101
BfmI	CTRYAG	1 cut(s)	318
BfuAI	ACCTGC	1 cut(s)	4
BisI	GCNGC	7 cut(s)	638, 641, 644, 815, 818, 833, 1002
BlpI	GCTNAGC	1 cut(s)	950
BlsI	GCNGC	7 cut(s)	639, 642, 645, 816, 819, 834, 1003
Bme1390I	CCNGG	3 cut(s)	65, 66, 956
Bme18I	GGWCC	2 cut(s)	190, 958
BmeT110I	CYCGRG	1 cut(s)	64
BmgT120I	GGNCC	2 cut(s)	190, 958
BmiI	GGNNCC	2 cut(s)	191, 750
BmrFI	CCNGG	3 cut(s)	65, 66, 956
BmrI	ACTGGG	1 cut(s)	649
BmsI	GCATC	3 cut(s)	858, 958, 1013
BmuI	ACTGGG	1 cut(s)	649
BoxI	GACNNNNGTC	2 cut(s)	377, 412
BpiI	GAAGAC	2 cut(s)	777, 1035
BpmI	CTGGAG	1 cut(s)	704
Bpu1102I	GCTNAGC	1 cut(s)	950
BpuEI	CTTGAG	2 cut(s)	328, 605
BpuMI	CCSGG	2 cut(s)	65, 66
BsaBI	GATNNNNATC	2 cut(s)	108, 165
BsaJI	CCNNGG	7 cut(s)	63, 64, 84, 185, 593, 744, 975
Bsc4I	CCNNNNNNNGG	2 cut(s)	85, 309
Bse1I	ACTGG	2 cut(s)	277, 655
Bse21I	CCTNAGG	1 cut(s)	468
Bse8I	GATNNNNATC	2 cut(s)	108, 165
BseBI	CCWGG	1 cut(s)	956
BseDI	CCNNGG	7 cut(s)	63, 64, 84, 185, 593, 744, 975
BseGI	GGATG	4 cut(s)	94, 351, 485, 1091
BseJI	GATNNNNATC	2 cut(s)	108, 165
BseLI	CCNNNNNNNGG	2 cut(s)	85, 309
BseMII	CTCAG	3 cut(s)	482, 767, 941
BseNI	ACTGG	2 cut(s)	277, 655
BseRI	GAGGAG	2 cut(s)	456, 818
BseXI	GCAGC	7 cut(s)	649, 652, 655, 826, 829, 844, 1013
BshFI	GGCC	4 cut(s)	393, 1022, 1034, 1054
BsiHKAI	GWGCWC	2 cut(s)	400, 927
BsiHKCI	CYCGRG	1 cut(s)	64
BsiSI	CCGG	2 cut(s)	65, 303
BslFI	GGGAC	2 cut(s)	203, 1091
BslI	CCNNNNNNNGG	2 cut(s)	85, 309
BsmAI	GTCTC	2 cut(s)	571, 594
BsmFI	GGGAC	2 cut(s)	203, 1091
BsnI	GGCC	4 cut(s)	393, 1022, 1034, 1054
BsoBI	CYCGRG	1 cut(s)	64
Bsp1286I	GDGCHC	2 cut(s)	400, 927
Bsp143I	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
Bsp1720I	GCTNAGC	1 cut(s)	950
BspACI	CCGC	1 cut(s)	1075
BspANI	GGCC	4 cut(s)	393, 1022, 1034, 1054
BspCNI	CTCAG	3 cut(s)	481, 766, 942
BspLI	GGNNCC	2 cut(s)	191, 750
BspMI	ACCTGC	1 cut(s)	4
BspPI	GGATC	1 cut(s)	431
BsrI	ACTGG	2 cut(s)	277, 655
BssECI	CCNNGG	7 cut(s)	63, 64, 84, 185, 593, 744, 975
BssMI	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
BssT1I	CCWWGG	3 cut(s)	593, 744, 975
Bst2UI	CCWGG	1 cut(s)	956
Bst4CI	ACNGT	1 cut(s)	520
Bst6I	CTCTTC	2 cut(s)	319, 500
BstC8I	GCNNGC	1 cut(s)	1032
BstDEI	CTNAG	5 cut(s)	113, 376, 468, 753, 950
BstDSI	CCRYGG	2 cut(s)	84, 185
BstEII	GGTNACC	1 cut(s)	907
BstF5I	GGATG	4 cut(s)	94, 351, 485, 1091
BstKTI	GATC	7 cut(s)	169, 226, 426, 602, 889, 904, 1117
BstMAI	GTCTC	2 cut(s)	571, 594
BstMBI	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
BstMWI	GCNNNNNNNGC	4 cut(s)	299, 643, 676, 814
BstNI	CCWGG	1 cut(s)	956
BstNSI	RCATGY	4 cut(s)	59, 691, 844, 1030
BstPAI	GACNNNNGTC	2 cut(s)	377, 412
BstPI	GGTNACC	1 cut(s)	907
BstSCI	CCNGG	3 cut(s)	63, 64, 954
BstSFI	CTRYAG	1 cut(s)	318
BstV1I	GCAGC	7 cut(s)	649, 652, 655, 826, 829, 844, 1013
BstV2I	GAAGAC	2 cut(s)	777, 1035
BstXI	CCANNNNNNTGG	1 cut(s)	1030
Bsu36I	CCTNAGG	1 cut(s)	468
BsuRI	GGCC	4 cut(s)	393, 1022, 1034, 1054
BtgI	CCRYGG	2 cut(s)	84, 185
BtsCI	GGATG	4 cut(s)	94, 351, 485, 1091
BtsIMutI	CAGTG	2 cut(s)	525, 662
BveI	ACCTGC	1 cut(s)	4
Cac8I	GCNNGC	1 cut(s)	1032
Cfr13I	GGNCC	2 cut(s)	190, 958
Cfr9I	CCCGGG	1 cut(s)	64
CseI	GACGC	1 cut(s)	930
Csp6I	GTAC	4 cut(s)	59, 238, 265, 682
CviQI	GTAC	4 cut(s)	59, 238, 265, 682
DdeI	CTNAG	5 cut(s)	113, 376, 468, 753, 950
DpnI	GATC	7 cut(s)	168, 225, 425, 601, 888, 903, 1116
DpnII	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	2 cut(s)	1020, 1032
Eam1104I	CTCTTC	2 cut(s)	319, 500
EarI	CTCTTC	2 cut(s)	319, 500
Eco130I	CCWWGG	3 cut(s)	593, 744, 975
Eco47I	GGWCC	2 cut(s)	190, 958
Eco81I	CCTNAGG	1 cut(s)	468
Eco88I	CYCGRG	1 cut(s)	64
Eco91I	GGTNACC	1 cut(s)	907
EcoO109I	RGGNCCY	1 cut(s)	190
EcoO65I	GGTNACC	1 cut(s)	907
EcoRII	CCWGG	1 cut(s)	954
EcoT14I	CCWWGG	3 cut(s)	593, 744, 975
EcoT22I	ATGCAT	1 cut(s)	432
ErhI	CCWWGG	3 cut(s)	593, 744, 975
FaqI	GGGAC	2 cut(s)	203, 1091
FauI	CCCGC	1 cut(s)	1068
FauNDI	CATATG	1 cut(s)	766
FbaI	TGATCA	3 cut(s)	223, 886, 901
Fnu4HI	GCNGC	7 cut(s)	638, 641, 644, 815, 818, 833, 1002
FokI	GGATG	4 cut(s)	101, 338, 492, 1078
Fsp4HI	GCNGC	7 cut(s)	638, 641, 644, 815, 818, 833, 1002
FspBI	CTAG	3 cut(s)	443, 450, 1101
GluI	GCNGC	7 cut(s)	638, 641, 644, 815, 818, 833, 1002
GsuI	CTGGAG	1 cut(s)	704
HaeIII	GGCC	4 cut(s)	393, 1022, 1034, 1054
HapII	CCGG	2 cut(s)	65, 303
HgaI	GACGC	1 cut(s)	930
HinfI	GANTC	6 cut(s)	75, 306, 542, 587, 710, 1040
HpaII	CCGG	2 cut(s)	65, 303
HphI	GGTGA	7 cut(s)	537, 545, 602, 615, 623, 692, 919
Hpy188I	TCNGA	2 cut(s)	228, 418
Hpy188III	TCNNGA	5 cut(s)	197, 310, 470, 502, 1047
HpyAV	CCTTC	3 cut(s)	203, 470, 1044
HpyCH4III	ACNGT	1 cut(s)	520
HpyCH4V	TGCA	8 cut(s)	13, 207, 430, 660, 679, 781, 814, 1001
HpyF10VI	GCNNNNNNNGC	4 cut(s)	299, 643, 676, 814
HpyF3I	CTNAG	5 cut(s)	113, 376, 468, 753, 950
Ksp22I	TGATCA	3 cut(s)	223, 886, 901
Kzo9I	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
LmnI	GCTCC	3 cut(s)	403, 729, 805
Lsp1109I	GCAGC	7 cut(s)	649, 652, 655, 826, 829, 844, 1013
LweI	GCATC	3 cut(s)	858, 958, 1013
MaeI	CTAG	3 cut(s)	443, 450, 1101
MaeIII	GTNAC	4 cut(s)	543, 907, 942, 982
MalI	GATC	7 cut(s)	168, 225, 425, 601, 888, 903, 1116
MboI	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
MboII	GAAGA	8 cut(s)	49, 104, 133, 336, 485, 517, 777, 1035
MfeI	CAATTG	1 cut(s)	809
MhlI	GDGCHC	2 cut(s)	400, 927
MlsI	TGGCCA	2 cut(s)	1022, 1034
MluCI	AATT	7 cut(s)	200, 603, 731, 809, 988, 1066, 1110
MluNI	TGGCCA	2 cut(s)	1022, 1034
MlyI	GAGTC	3 cut(s)	551, 596, 1049
Mox20I	TGGCCA	2 cut(s)	1022, 1034
Mph1103I	ATGCAT	1 cut(s)	432
MscI	TGGCCA	2 cut(s)	1022, 1034
MslI	CAYNNNNRTG	3 cut(s)	362, 615, 705
Msp20I	TGGCCA	2 cut(s)	1022, 1034
MspA1I	CMGCKG	1 cut(s)	949
MspI	CCGG	2 cut(s)	65, 303
MspR9I	CCNGG	3 cut(s)	65, 66, 956
MunI	CAATTG	1 cut(s)	809
MvaI	CCWGG	1 cut(s)	956
MwoI	GCNNNNNNNGC	4 cut(s)	299, 643, 676, 814
NciI	CCSGG	2 cut(s)	65, 66
NdeI	CATATG	1 cut(s)	766
NdeII	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
NlaIV	GGNNCC	2 cut(s)	191, 750
NmuCI	GTSAC	3 cut(s)	543, 907, 942
NsiI	ATGCAT	1 cut(s)	432
NspI	RCATGY	4 cut(s)	59, 691, 844, 1030
PciI	ACATGT	2 cut(s)	55, 840
PfeI	GAWTC	3 cut(s)	75, 306, 710
PflFI	GACNNNGTC	1 cut(s)	563
PkrI	GCNGC	7 cut(s)	639, 642, 645, 816, 819, 834, 1003
PleI	GAGTC	3 cut(s)	550, 595, 1048
PpsI	GAGTC	3 cut(s)	550, 595, 1048
PpuMI	RGGWCCY	1 cut(s)	190
PscI	ACATGT	2 cut(s)	55, 840
PshAI	GACNNNNGTC	2 cut(s)	377, 412
PsiI	TTATAA	1 cut(s)	174
Psp5II	RGGWCCY	1 cut(s)	190
Psp6I	CCWGG	1 cut(s)	954
PspEI	GGTNACC	1 cut(s)	907
PspGI	CCWGG	1 cut(s)	954
PspN4I	GGNNCC	2 cut(s)	191, 750
PspPI	GGNCC	2 cut(s)	190, 958
PspPPI	RGGWCCY	1 cut(s)	190
PsyI	GACNNNGTC	1 cut(s)	563
PvuII	CAGCTG	1 cut(s)	949
RsaI	GTAC	4 cut(s)	60, 239, 266, 683
RsaNI	GTAC	4 cut(s)	59, 238, 265, 682
RseI	CAYNNNNRTG	3 cut(s)	362, 615, 705
SatI	GCNGC	7 cut(s)	638, 641, 644, 815, 818, 833, 1002
Sau3AI	GATC	7 cut(s)	166, 223, 423, 599, 886, 901, 1114
Sau96I	GGNCC	2 cut(s)	190, 958
SchI	GAGTC	3 cut(s)	551, 596, 1049
ScrFI	CCNGG	3 cut(s)	65, 66, 956
SduI	GDGCHC	2 cut(s)	400, 927
SfaNI	GCATC	3 cut(s)	858, 958, 1013
SfcI	CTRYAG	1 cut(s)	318
SinI	GGWCC	2 cut(s)	190, 958
SmaI	CCCGGG	1 cut(s)	66
SmiMI	CAYNNNNRTG	3 cut(s)	362, 615, 705
SmlI	CTYRAG	2 cut(s)	343, 584
SmoI	CTYRAG	2 cut(s)	343, 584
SpeI	ACTAGT	1 cut(s)	449
Sse9I	AATT	7 cut(s)	200, 603, 731, 809, 988, 1066, 1110
SsiI	CCGC	1 cut(s)	1075
SspMI	CTAG	3 cut(s)	443, 450, 1101
StyD4I	CCNGG	3 cut(s)	63, 64, 954
StyI	CCWWGG	3 cut(s)	593, 744, 975
TaaI	ACNGT	1 cut(s)	520
TaqI	TCGA	4 cut(s)	102, 280, 439, 927
TaqII	GACCGA	1 cut(s)	926
TasI	AATT	7 cut(s)	200, 603, 731, 809, 988, 1066, 1110
TatI	WGTACW	1 cut(s)	681
TfiI	GAWTC	3 cut(s)	75, 306, 710
TscAI	CASTG	2 cut(s)	525, 662
TseFI	GTSAC	3 cut(s)	543, 907, 942
TseI	GCWGC	7 cut(s)	637, 640, 643, 814, 817, 832, 1001
Tsp45I	GTSAC	3 cut(s)	543, 907, 942
TspDTI	ATGAA	6 cut(s)	56, 105, 246, 562, 1004, 1077
TspGWI	ACGGA	2 cut(s)	47, 101
TspMI	CCCGGG	1 cut(s)	64
TspRI	CASTG	2 cut(s)	525, 662
Tth111I	GACNNNGTC	1 cut(s)	563
VpaK11BI	GGWCC	2 cut(s)	190, 958
XapI	RAATTY	1 cut(s)	1066
XceI	RCATGY	4 cut(s)	59, 691, 844, 1030
XmaI	CCCGGG	1 cut(s)	64
XspI	CTAG	3 cut(s)	443, 450, 1101
Zsp2I	ATGCAT	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.