Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004983

Physical Location & Seq

Genomic Coordinates Reverse (-)

14327625 .. 14329336

Gene Structure 1712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G164500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 615 bp

ATGGCATCTACTGGGATTCTTTTGGCTTCTCTTCTTCTCCTCTCTTGCTTAGCAGAAACCTCCCATGGTGTCCTCCTTTCGTCTCTGAAACAAACTCTCATAGTCACTGCTTCACACAAAGAAGGACAGGTTTACAAAACAGGGATAGACAAACTCACCGTCTCGTGGGGTCTGAACCAGAGTTTCCCAGCTGGATCAGACTCAACCTACAAGACCATCAAGGTGAAGTTCTGCTACGCGCCGGTGAGCCAGGTGGACCGCGGGTGGAGGAAGACGGTGGACAGCCTCAACAAGGACAAGACATGCCAATTCAAGGTCGTTGCTAGGCCCTACAGCAGCTCGAACCAGAGCTTCGAGTGGACCATCGAGCGCGACGTGCCTTCCGCCACGTACTTTCTACGCGCCTACGCCTACGACGCCGCGGATGTTGAGGTGGCTTACGGTCAGACCACAGACGCTCAAAAGGAAACCAACTTGTTTGTGGTCCAGGCAATCACTGGACGCCACGCGTCCCTTGATATTGCGTCCGTTTGCTTCAGTGTTTTCTCGGTTTTGTCCTTGGCTGGTTTCTTTATTGCTGAAAAGAGAAAGGCAAAGTCGTCCCACGAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0008150 GO:0008509 GO:0009611 GO:0010035 GO:0010167 GO:0015075 GO:0015103 GO:0015112 GO:0015318 GO:0015698 GO:0015706 GO:0016020 GO:0022857 GO:0034220 GO:0042221 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071705 GO:0071944 GO:0098656 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAR2

Protein Analysis

205

Amino Acids

22.4

Weight (kDa)

8.97

Isoelectric Point (pI)

29.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004983)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24715 AT5G50200 AT5G50200 AT5G50200
fragaria_vesca	FvH4_5g06392 FvH4_5g06400
malus_domestica	MD06G1164900.v1.1 MD14G1170300.v1.1
prunus_persica	Prupe.5G164500_v2.0.a1
pyrus_communis	pycom06g14750 pycom14g14220
rosa_chinensis	RchiOBHm_Chr7g0192401
rosa_laevigata	RLG00000004371 RLG00000004372
rosa_multiflora	Rmu_sc0003108.1_g000019
rosa_roxburghii	Rroxscaffold_3G00263040 Rroxscaffold_3G00263050 Rroxscaffold_6G00388180
rosa_rugosa	Rorug07G0001300 Rorug07G0001400
rosa_samantha	Rh7AG125000 Rh7AG125100 Rh7BG127200 Rh7BG127400 Rh7CG129000 Rh7CG129100 Rh7DG129100 Rh7DG129200
rosa_wichuraiana	Rw7G010760 Rw7G010770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
AciI	CCGC	5 cut(s)	259, 261, 384, 420, 422
AclWI	GGATC	1 cut(s)	202
AcuI	CTGAAG	1 cut(s)	520
AcyI	GRCGYC	2 cut(s)	417, 502
AfaI	GTAC	1 cut(s)	392
AfiI	CCNNNNNNNGG	3 cut(s)	165, 292, 313
AflIII	ACRYGT	1 cut(s)	507
AgsI	TTSAA	1 cut(s)	313
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	2 cut(s)	249, 486
AluBI	AGCT	3 cut(s)	191, 339, 351
AluI	AGCT	3 cut(s)	191, 339, 351
Alw26I	GTCTC	2 cut(s)	87, 166
AlwI	GGATC	1 cut(s)	202
AoxI	GGCC	1 cut(s)	326
ApeKI	GCWGC	1 cut(s)	336
ArsI	GACNNNNNNTTYG	2 cut(s)	144, 176
AspLEI	GCGC	3 cut(s)	241, 372, 404
AspS9I	GGNCC	4 cut(s)	256, 327, 360, 484
AsuHPI	GGTGA	3 cut(s)	148, 235, 256
AvaII	GGWCC	3 cut(s)	256, 360, 484
BarI	GAAGNNNNNNTAC	2 cut(s)	218, 250
BauI	CACGAG	2 cut(s)	163, 605
BbsI	GAAGAC	1 cut(s)	278
BbvI	GCAGC	1 cut(s)	348
BccI	CCATC	2 cut(s)	224, 371
BciT130I	CCWGG	2 cut(s)	251, 488
BcoDI	GTCTC	2 cut(s)	87, 166
BfaI	CTAG	1 cut(s)	324
BfmI	CTRYAG	1 cut(s)	331
BisI	GCNGC	2 cut(s)	337, 420
BlpI	GCTNAGC	1 cut(s)	49
BlsI	GCNGC	2 cut(s)	338, 421
Bme1390I	CCNGG	2 cut(s)	251, 488
Bme18I	GGWCC	3 cut(s)	256, 360, 484
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	4 cut(s)	256, 327, 360, 484
BmrFI	CCNGG	2 cut(s)	251, 488
BmrI	ACTGGG	1 cut(s)	21
BmsI	GCATC	1 cut(s)	14
BmuI	ACTGGG	1 cut(s)	21
BpiI	GAAGAC	1 cut(s)	278
Bpu1102I	GCTNAGC	1 cut(s)	49
BsaAI	YACGTR	1 cut(s)	390
BsaHI	GRCGYC	2 cut(s)	417, 502
BsaJI	CCNNGG	4 cut(s)	64, 259, 420, 558
Bsc4I	CCNNNNNNNGG	3 cut(s)	165, 292, 313
Bse118I	RCCGGY	1 cut(s)	241
Bse1I	ACTGG	2 cut(s)	16, 502
BseBI	CCWGG	2 cut(s)	251, 488
BseDI	CCNNGG	4 cut(s)	64, 259, 420, 558
BseGI	GGATG	1 cut(s)	430
BseLI	CCNNNNNNNGG	3 cut(s)	165, 292, 313
BseNI	ACTGG	2 cut(s)	16, 502
BseRI	GAGGAG	1 cut(s)	29
BseXI	GCAGC	1 cut(s)	348
BseYI	CCCAGC	1 cut(s)	187
Bsh1236I	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
BshFI	GGCC	1 cut(s)	328
BsiSI	CCGG	1 cut(s)	242
BslFI	GGGAC	2 cut(s)	496, 586
BslI	CCNNNNNNNGG	3 cut(s)	165, 292, 313
BsmAI	GTCTC	2 cut(s)	87, 166
BsmBI	CGTCTC	2 cut(s)	87, 166
BsmFI	GGGAC	2 cut(s)	496, 586
BsnI	GGCC	1 cut(s)	328
Bsp143I	GATC	1 cut(s)	194
Bsp1720I	GCTNAGC	1 cut(s)	49
Bsp19I	CCATGG	1 cut(s)	64
BspACI	CCGC	5 cut(s)	259, 261, 384, 420, 422
BspANI	GGCC	1 cut(s)	328
BspFNI	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
BspPI	GGATC	1 cut(s)	202
BsrFI	RCCGGY	1 cut(s)	241
BsrI	ACTGG	2 cut(s)	16, 502
BssAI	RCCGGY	1 cut(s)	241
BssECI	CCNNGG	4 cut(s)	64, 259, 420, 558
BssMI	GATC	1 cut(s)	194
BssNI	GRCGYC	2 cut(s)	417, 502
BssSI	CACGAG	2 cut(s)	163, 605
BssT1I	CCWWGG	2 cut(s)	64, 558
Bst2BI	CACGAG	2 cut(s)	163, 605
Bst2UI	CCWGG	2 cut(s)	251, 488
Bst4CI	ACNGT	3 cut(s)	160, 277, 443
Bst6I	CTCTTC	1 cut(s)	36
BstACI	GRCGYC	2 cut(s)	417, 502
BstBAI	YACGTR	1 cut(s)	390
BstDEI	CTNAG	1 cut(s)	49
BstDSI	CCRYGG	3 cut(s)	64, 259, 420
BstENI	CCTNNNNNAGG	1 cut(s)	290
BstF5I	GGATG	1 cut(s)	430
BstFNI	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
BstHHI	GCGC	3 cut(s)	241, 372, 404
BstKTI	GATC	1 cut(s)	197
BstMAI	GTCTC	2 cut(s)	87, 166
BstMBI	GATC	1 cut(s)	194
BstMWI	GCNNNNNNNGC	2 cut(s)	376, 416
BstNI	CCWGG	2 cut(s)	251, 488
BstNSI	RCATGY	1 cut(s)	306
BstSCI	CCNGG	2 cut(s)	249, 486
BstSFI	CTRYAG	1 cut(s)	331
BstUI	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
BstV1I	GCAGC	1 cut(s)	348
BstV2I	GAAGAC	1 cut(s)	278
BsuRI	GGCC	1 cut(s)	328
BtgI	CCRYGG	3 cut(s)	64, 259, 420
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	1 cut(s)	430
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	3 cut(s)	105, 495, 544
CfoI	GCGC	3 cut(s)	241, 372, 404
Cfr10I	RCCGGY	1 cut(s)	241
Cfr13I	GGNCC	4 cut(s)	256, 327, 360, 484
Cfr42I	CCGCGG	2 cut(s)	262, 423
CseI	GACGC	5 cut(s)	425, 464, 498, 510, 513
Csp6I	GTAC	1 cut(s)	391
CviAII	CATG	2 cut(s)	65, 303
CviJI	RGCY	9 cut(s)	26, 191, 249, 285, 328, 339, 351, 437, 563
CviKI_1	RGCY	9 cut(s)	26, 191, 249, 285, 328, 339, 351, 437, 563
CviQI	GTAC	1 cut(s)	391
DdeI	CTNAG	1 cut(s)	49
DpnI	GATC	1 cut(s)	196
DpnII	GATC	1 cut(s)	194
Eam1104I	CTCTTC	1 cut(s)	36
EarI	CTCTTC	1 cut(s)	36
EciI	GGCGGA	1 cut(s)	373
Eco130I	CCWWGG	2 cut(s)	64, 558
Eco47I	GGWCC	3 cut(s)	256, 360, 484
Eco57I	CTGAAG	1 cut(s)	520
EcoNI	CCTNNNNNAGG	1 cut(s)	290
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRII	CCWGG	2 cut(s)	249, 486
EcoT14I	CCWWGG	2 cut(s)	64, 558
ErhI	CCWWGG	2 cut(s)	64, 558
Esp3I	CGTCTC	2 cut(s)	87, 166
FaeI	CATG	2 cut(s)	68, 306
FaiI	YATR	3 cut(s)	66, 101, 304
FaqI	GGGAC	2 cut(s)	496, 586
FatI	CATG	2 cut(s)	64, 302
FauI	CCCGC	1 cut(s)	254
Fnu4HI	GCNGC	2 cut(s)	337, 420
FokI	GGATG	1 cut(s)	437
Fsp4HI	GCNGC	2 cut(s)	337, 420
FspBI	CTAG	1 cut(s)	324
GlaI	GCGC	3 cut(s)	240, 371, 403
GluI	GCNGC	2 cut(s)	337, 420
GsaI	CCCAGC	1 cut(s)	191
HaeIII	GGCC	1 cut(s)	328
HapII	CCGG	1 cut(s)	242
HgaI	GACGC	5 cut(s)	425, 464, 498, 510, 513
HhaI	GCGC	3 cut(s)	241, 372, 404
Hin1I	GRCGYC	2 cut(s)	417, 502
Hin1II	CATG	2 cut(s)	68, 306
Hin6I	GCGC	3 cut(s)	239, 370, 402
HinP1I	GCGC	3 cut(s)	239, 370, 402
HinfI	GANTC	2 cut(s)	16, 200
HpaII	CCGG	1 cut(s)	242
HphI	GGTGA	3 cut(s)	148, 235, 256
Hpy166II	GTNNAC	4 cut(s)	133, 256, 280, 360
Hpy188I	TCNGA	4 cut(s)	87, 174, 199, 447
Hpy8I	GTNNAC	4 cut(s)	133, 256, 280, 360
Hpy99I	CGWCG	2 cut(s)	377, 419
HpyAV	CCTTC	2 cut(s)	116, 390
HpyCH4III	ACNGT	3 cut(s)	160, 277, 443
HpyCH4IV	ACGT	2 cut(s)	375, 389
HpyF10VI	GCNNNNNNNGC	2 cut(s)	376, 416
HpyF3I	CTNAG	1 cut(s)	49
HpySE526I	ACGT	2 cut(s)	375, 389
Hsp92I	GRCGYC	2 cut(s)	417, 502
Hsp92II	CATG	2 cut(s)	68, 306
HspAI	GCGC	3 cut(s)	239, 370, 402
KspI	CCGCGG	2 cut(s)	262, 423
Kzo9I	GATC	1 cut(s)	194
Lsp1109I	GCAGC	1 cut(s)	348
LweI	GCATC	1 cut(s)	14
MaeI	CTAG	1 cut(s)	324
MaeII	ACGT	2 cut(s)	375, 389
MaeIII	GTNAC	1 cut(s)	103
MalI	GATC	1 cut(s)	196
MboI	GATC	1 cut(s)	194
MboII	GAAGA	3 cut(s)	23, 26, 283
MluCI	AATT	1 cut(s)	308
MluI	ACGCGT	1 cut(s)	507
MlyI	GAGTC	1 cut(s)	194
MnlI	CCTC	6 cut(s)	50, 70, 83, 261, 296, 424
MslI	CAYNNNNRTG	1 cut(s)	221
MspA1I	CMGCKG	3 cut(s)	191, 261, 422
MspI	CCGG	1 cut(s)	242
MspR9I	CCNGG	2 cut(s)	251, 488
MvaI	CCWGG	2 cut(s)	251, 488
MvnI	CGCG	6 cut(s)	239, 261, 372, 402, 422, 509
MwoI	GCNNNNNNNGC	2 cut(s)	376, 416
NcoI	CCATGG	1 cut(s)	64
NdeII	GATC	1 cut(s)	194
NlaIII	CATG	2 cut(s)	68, 306
NmuCI	GTSAC	1 cut(s)	103
NspI	RCATGY	1 cut(s)	306
PcsI	WCGNNNNNNNCGW	1 cut(s)	372
PfeI	GAWTC	1 cut(s)	16
PkrI	GCNGC	2 cut(s)	338, 421
PleI	GAGTC	1 cut(s)	194
PpsI	GAGTC	1 cut(s)	194
Ppu21I	YACGTR	1 cut(s)	390
Psp6I	CCWGG	2 cut(s)	249, 486
PspFI	CCCAGC	1 cut(s)	187
PspGI	CCWGG	2 cut(s)	249, 486
PspPI	GGNCC	4 cut(s)	256, 327, 360, 484
PvuII	CAGCTG	1 cut(s)	191
RsaI	GTAC	1 cut(s)	392
RsaNI	GTAC	1 cut(s)	391
RseI	CAYNNNNRTG	1 cut(s)	221
SacII	CCGCGG	2 cut(s)	262, 423
SatI	GCNGC	2 cut(s)	337, 420
Sau3AI	GATC	1 cut(s)	194
Sau96I	GGNCC	4 cut(s)	256, 327, 360, 484
SchI	GAGTC	1 cut(s)	194
ScrFI	CCNGG	2 cut(s)	251, 488
SfaNI	GCATC	1 cut(s)	14
SfcI	CTRYAG	1 cut(s)	331
Sfr303I	CCGCGG	2 cut(s)	262, 423
SgrAI	CRCCGGYG	1 cut(s)	241
SgrBI	CCGCGG	2 cut(s)	262, 423
SinI	GGWCC	3 cut(s)	256, 360, 484
SmiMI	CAYNNNNRTG	1 cut(s)	221
Sse9I	AATT	1 cut(s)	308
SsiI	CCGC	5 cut(s)	259, 261, 384, 420, 422
SspMI	CTAG	1 cut(s)	324
StyD4I	CCNGG	2 cut(s)	249, 486
StyI	CCWWGG	2 cut(s)	64, 558
TaaI	ACNGT	3 cut(s)	160, 277, 443
TaiI	ACGT	2 cut(s)	378, 392
TaqI	TCGA	3 cut(s)	341, 354, 366
TasI	AATT	1 cut(s)	308
TauI	GCSGC	1 cut(s)	422
TfiI	GAWTC	1 cut(s)	16
TscAI	CASTG	3 cut(s)	112, 502, 544
TseFI	GTSAC	1 cut(s)	103
TseI	GCWGC	1 cut(s)	336
Tsp45I	GTSAC	1 cut(s)	103
TspGWI	ACGGA	1 cut(s)	517
TspRI	CASTG	3 cut(s)	112, 502, 544
VpaK11BI	GGWCC	3 cut(s)	256, 360, 484
XagI	CCTNNNNNAGG	1 cut(s)	290
XceI	RCATGY	1 cut(s)	306
XcmI	CCANNNNNNNNNTGG	2 cut(s)	478, 494
XspI	CTAG	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.