PLAC8 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11380 |
| fragaria_vesca | FvH4_3g03670 |
| malus_domestica | MD05G1328900.v1.1 MD10G1305800.v1.1 |
| prunus_persica | Prupe.4G033900_v2.0.a1 Prupe.5G244100_v2.0.a1 |
| pyrus_communis | pycom05g30220 pycom10g25810 |
| rosa_chinensis | RchiOBHm_Chr5g0005711 |
| rosa_laevigata | RLG00000031320 |
| rosa_multiflora | Rmu_co8412991.1_g000001 Rmu_sc0000570.1_g000028 Rmu_sc0000570.1_g000031 Rmu_sc0010248.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00070130 |
| rosa_rugosa | Rorug04G0417500 Rorug04G0417500 |
| rosa_samantha | Rh5AG045100 Rh5BG043800 Rh5CG052600 Rh5DG043600 |
| rosa_wichuraiana | Rw0G008380 Rw5G004530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 143, 299 |
| AcsI | RAATTY | 2 cut(s) | 29, 206 |
| AfaI | GTAC | 2 cut(s) | 182, 190 |
| ApoI | RAATTY | 2 cut(s) | 29, 206 |
| AsuHPI | GGTGA | 2 cut(s) | 145, 298 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 172, 205 |
| BccI | CCATC | 1 cut(s) | 261 |
| BfaI | CTAG | 1 cut(s) | 164 |
| BmiI | GGNNCC | 1 cut(s) | 303 |
| BmsI | GCATC | 1 cut(s) | 255 |
| BsaJI | CCNNGG | 1 cut(s) | 234 |
| BseDI | CCNNGG | 1 cut(s) | 234 |
| BseGI | GGATG | 1 cut(s) | 244 |
| BspACI | CCGC | 2 cut(s) | 143, 299 |
| BspLI | GGNNCC | 1 cut(s) | 303 |
| BssECI | CCNNGG | 1 cut(s) | 234 |
| BssT1I | CCWWGG | 1 cut(s) | 234 |
| Bst6I | CTCTTC | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 312 |
| BstF5I | GGATG | 1 cut(s) | 244 |
| BtsCI | GGATG | 1 cut(s) | 244 |
| BtsI | GCAGTG | 1 cut(s) | 124 |
| BtsIMutI | CAGTG | 1 cut(s) | 124 |
| Cac8I | GCNNGC | 1 cut(s) | 312 |
| Csp6I | GTAC | 2 cut(s) | 181, 189 |
| CviAII | CATG | 1 cut(s) | 267 |
| CviQI | GTAC | 2 cut(s) | 181, 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 66 |
| EarI | CTCTTC | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 1 cut(s) | 234 |
| EcoT14I | CCWWGG | 1 cut(s) | 234 |
| ErhI | CCWWGG | 1 cut(s) | 234 |
| FaeI | CATG | 1 cut(s) | 270 |
| FaiI | YATR | 5 cut(s) | 136, 172, 268, 280, 308 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 45, 77, 113, 145 |
| FatI | CATG | 1 cut(s) | 266 |
| FokI | GGATG | 1 cut(s) | 251 |
| FspBI | CTAG | 1 cut(s) | 164 |
| Hin1II | CATG | 1 cut(s) | 270 |
| HinfI | GANTC | 1 cut(s) | 23 |
| HphI | GGTGA | 2 cut(s) | 145, 298 |
| Hpy166II | GTNNAC | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 1 cut(s) | 28 |
| Hpy188III | TCNNGA | 1 cut(s) | 35 |
| Hpy8I | GTNNAC | 1 cut(s) | 191 |
| HpyAV | CCTTC | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 5 cut(s) | 52, 99, 246, 275, 314 |
| Hsp92II | CATG | 1 cut(s) | 270 |
| LpnPI | CCDG | 1 cut(s) | 269 |
| LweI | GCATC | 1 cut(s) | 255 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MboII | GAAGA | 2 cut(s) | 53, 130 |
| MfeI | CAATTG | 1 cut(s) | 12 |
| MluCI | AATT | 3 cut(s) | 12, 29, 206 |
| MnlI | CCTC | 1 cut(s) | 10 |
| MseI | TTAA | 1 cut(s) | 210 |
| MunI | CAATTG | 1 cut(s) | 12 |
| NlaIII | CATG | 1 cut(s) | 270 |
| NlaIV | GGNNCC | 1 cut(s) | 303 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PspN4I | GGNNCC | 1 cut(s) | 303 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 214, 246 |
| RsaI | GTAC | 2 cut(s) | 182, 190 |
| RsaNI | GTAC | 2 cut(s) | 181, 189 |
| SaqAI | TTAA | 1 cut(s) | 210 |
| SetI | ASST | 5 cut(s) | 21, 107, 223, 288, 307 |
| SfaNI | GCATC | 1 cut(s) | 255 |
| SgeI | CNNG | 8 cut(s) | 47, 65, 95, 142, 176, 247, 279, 296 |
| Sse9I | AATT | 3 cut(s) | 12, 29, 206 |
| SsiI | CCGC | 2 cut(s) | 143, 299 |
| SspMI | CTAG | 1 cut(s) | 164 |
| StyI | CCWWGG | 1 cut(s) | 234 |
| TasI | AATT | 3 cut(s) | 12, 29, 206 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| Tru1I | TTAA | 1 cut(s) | 210 |
| Tru9I | TTAA | 1 cut(s) | 210 |
| TscAI | CASTG | 1 cut(s) | 131 |
| TspDTI | ATGAA | 3 cut(s) | 53, 97, 212 |
| TspGWI | ACGGA | 1 cut(s) | 176 |
| TspRI | CASTG | 1 cut(s) | 131 |
| XapI | RAATTY | 2 cut(s) | 29, 206 |
| XspI | CTAG | 1 cut(s) | 164 |