Prupe.6G057500_v2.0.a1

pfkB family carbohydrate kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
4024348 .. 4027195
2848 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G057500.1

Sequence Viewer

Length: 1155 bp
ATGGTTCGAGACCGAAACCAACCCAATTCCACTCACCGAGTGCTAGTCTCCGGCAACTATTGCCACGACGTTCTCATCAAGGACGGCGTCGTTTTGGCCGAGACTCTCGGCGGGGCAGCCTCTTTCATCTCCAACGTCTTCGATGGCCTCTCCGTTCCCTACAATCTGGTCTCCAAAGTCGGCTCCGACTTCGCTTACTCGGTTCCTCGTGACCCCATTGTTGTACCCAATTGCAAAACCACTCTGTTCCACGCGCATTTCGATTCGGGCGTCGACGGCGACGGCCGCCAGGACCGGGTTCTGAAACGGGTCAGCTCCTGCGACCCGATTAAGCCCTCGGATCTCCCCGAATCCAGGTTTGATTTCGGAATGGCGGTCGGGGTCGGAGGGGAGGTCACGGTCGAGACGATGGAGAAGCTGCTTGAGATTTGCAACACTGTGTTTGTGGACATCCAGGCTCTGATCCGAGCTTTCGATGGCGTCAATGGGACTGTGAAGCATGTGGCTTTGAAAGAGAGTGGTTTCTTCCACCTATTGCCGCGAATGGGGTTCTTAAAGGCATCGGCGGAAGAGGCCTTGTTCATGGAGGTTGAGGAGGTGAGGAAGCTCTGCTGTGTTGTTGTGACGAACGGGAGGCGTGGGTGCAGAGTGTATTGGAGAGATGGGGAAGTGGAAGTTGGGCCTTTTCCGACGAACCAGGTTGATCCGACAGGTGCCGGAGACAGTTTCTTAGGTGGGTTTGTTGCTGGGCTTGTTAATGGGTTAACTGTGCCTGATGCTGCATTGCTTGGGAACTTGTTTGGGTCATTGACTGTTGGGCAAATTGGACTGCCCAAGTTCGATTTCAGATTGCTACAGAGAGCTCGGGAAGAGGTGCAGAGAAGAAAAATGCAGTGTGTTAACTGTTATGAAAGAAAAGATGACAAGTTTAGGTTTGTGAACGCAGCAGGACATGAACAATTTCATGCATCTCTTGGAGTAGCTAAGCAGACAACAAAATGCCTTGCTCATGAACCTCAATGGGATCTGCCAAGTTCTCCTCCCAAATCCACAGAGCAGGTTGTCCTCTGTCAATACACGACACAGTCCAAATCGTTAACTGGCTCTGTCTACGAGGAGGCAATTAAAACAGTCGACGTTGAAAGTAAACCGTGA

Protein Analysis

385

Amino Acids

42.08

Weight (kDa)

6.03

Isoelectric Point (pI)

26.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1048
AccB1I GGYRCC 1 cut(s) 713
AccI GTMKAC 3 cut(s) 273, 1110, 1134
AccII CGCG 2 cut(s) 254, 541
AciI CCGC 5 cut(s) 111, 286, 374, 539, 566
AclWI GGATC 4 cut(s) 348, 457, 698, 1032
AcoI YGGCCR 2 cut(s) 96, 283
AcyI GRCGYC 3 cut(s) 87, 270, 480
AdeI CACNNNGTG 1 cut(s) 40
AfaI GTAC 1 cut(s) 225
AfiI CCNNNNNNNGG 3 cut(s) 295, 354, 545
AgsI TTSAA 2 cut(s) 511, 1142
AjnI CCWGG 4 cut(s) 288, 353, 453, 696
AjuI GAANNNNNNNTTGG 4 cut(s) 660, 692, 827, 859
AluBI AGCT 6 cut(s) 315, 418, 470, 607, 863, 983
AluI AGCT 6 cut(s) 315, 418, 470, 607, 863, 983
Alw21I GWGCWC 1 cut(s) 865
Alw26I GTCTC 6 cut(s) 3, 52, 95, 175, 398, 714
AlwI GGATC 4 cut(s) 348, 457, 698, 1032
AlwNI CAGNNNCTG 2 cut(s) 318, 460
Ama87I CYCGRG 1 cut(s) 864
AoxI GGCC 5 cut(s) 96, 145, 283, 573, 680
ApeKI GCWGC 4 cut(s) 116, 418, 779, 944
Asp700I GAANNNNTTC 1 cut(s) 960
AspLEI GCGC 1 cut(s) 256
AspS9I GGNCC 2 cut(s) 292, 680
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 2 cut(s) 26, 610
AvaI CYCGRG 1 cut(s) 864
AvaII GGWCC 1 cut(s) 292
BanI GGYRCC 1 cut(s) 713
BanII GRGCYC 1 cut(s) 865
BauI CACGAG 1 cut(s) 207
BbsI GAAGAC 1 cut(s) 130
Bbv12I GWGCWC 1 cut(s) 865
BbvI GCAGC 4 cut(s) 128, 405, 766, 956
BccI CCATC 4 cut(s) 137, 403, 470, 656
BceAI ACGGC 3 cut(s) 100, 292, 298
BciT130I CCWGG 4 cut(s) 290, 355, 455, 698
BcnI CCSGG 1 cut(s) 296
BcoDI GTCTC 6 cut(s) 3, 52, 95, 175, 398, 714
BfaI CTAG 1 cut(s) 44
BfmI CTRYAG 1 cut(s) 854
BfuAI ACCTGC 1 cut(s) 1048
BisI GCNGC 6 cut(s) 117, 286, 419, 539, 780, 945
BlpI GCTNAGC 1 cut(s) 984
BlsI GCNGC 6 cut(s) 118, 287, 420, 540, 781, 946
Bme1390I CCNGG 5 cut(s) 290, 296, 355, 455, 698
Bme18I GGWCC 1 cut(s) 292
BmeT110I CYCGRG 1 cut(s) 864
BmgT120I GGNCC 2 cut(s) 292, 680
BmiI GGNNCC 3 cut(s) 184, 204, 715
BmrFI CCNGG 5 cut(s) 290, 296, 355, 455, 698
BmsI GCATC 3 cut(s) 569, 766, 977
BpiI GAAGAC 1 cut(s) 130
Bpu1102I GCTNAGC 1 cut(s) 984
BpuEI CTTGAG 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 296
BsaHI GRCGYC 3 cut(s) 87, 270, 480
BsaI GGTCTC 2 cut(s) 3, 175
BsaJI CCNNGG 1 cut(s) 336
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 3 cut(s) 295, 354, 545
Bse1I ACTGG 1 cut(s) 1105
Bse3DI GCAATG 1 cut(s) 782
BseBI CCWGG 4 cut(s) 290, 355, 455, 698
BseDI CCNNGG 1 cut(s) 336
BseGI GGATG 1 cut(s) 450
BseLI CCNNNNNNNGG 3 cut(s) 295, 354, 545
BseMI GCAATG 1 cut(s) 782
BseNI ACTGG 1 cut(s) 1105
BseRI GAGGAG 3 cut(s) 608, 1029, 1130
BseX3I CGGCCG 1 cut(s) 283
BseXI GCAGC 4 cut(s) 128, 405, 766, 956
BseYI CCCAGC 1 cut(s) 746
BsgI GTGCAG 2 cut(s) 664, 896
Bsh1236I CGCG 2 cut(s) 254, 541
Bsh1285I CGRYCG 3 cut(s) 286, 378, 402
BshFI GGCC 5 cut(s) 98, 147, 285, 575, 682
BshNI GGYRCC 1 cut(s) 713
BsiEI CGRYCG 3 cut(s) 286, 378, 402
BsiHKAI GWGCWC 1 cut(s) 865
BsiHKCI CYCGRG 1 cut(s) 864
BsiSI CCGG 3 cut(s) 51, 295, 717
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 3 cut(s) 295, 354, 545
BsmAI GTCTC 6 cut(s) 3, 52, 95, 175, 398, 714
BsmBI CGTCTC 1 cut(s) 398
BsmFI GGGAC 1 cut(s) 502
BsnI GGCC 5 cut(s) 98, 147, 285, 575, 682
Bso31I GGTCTC 2 cut(s) 3, 175
BsoBI CYCGRG 1 cut(s) 864
Bsp1286I GDGCHC 1 cut(s) 865
Bsp143I GATC 4 cut(s) 340, 462, 703, 1024
Bsp1720I GCTNAGC 1 cut(s) 984
BspACI CCGC 5 cut(s) 111, 286, 374, 539, 566
BspANI GGCC 5 cut(s) 98, 147, 285, 575, 682
BspFNI CGCG 2 cut(s) 254, 541
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 3 cut(s) 184, 204, 715
BspMI ACCTGC 1 cut(s) 1048
BspPI GGATC 4 cut(s) 348, 457, 698, 1032
BspT107I GGYRCC 1 cut(s) 713
BspTNI GGTCTC 2 cut(s) 3, 175
BsrDI GCAATG 1 cut(s) 782
BsrI ACTGG 1 cut(s) 1105
BssECI CCNNGG 1 cut(s) 336
BssMI GATC 4 cut(s) 340, 462, 703, 1024
BssNI GRCGYC 3 cut(s) 87, 270, 480
BssSI CACGAG 1 cut(s) 207
Bst2BI CACGAG 1 cut(s) 207
Bst2UI CCWGG 4 cut(s) 290, 355, 455, 698
Bst6I CTCTTC 2 cut(s) 564, 864
BstACI GRCGYC 3 cut(s) 87, 270, 480
BstAPI GCANNNNNTGC 1 cut(s) 60
BstDEI CTNAG 2 cut(s) 730, 984
BstF5I GGATG 1 cut(s) 450
BstFNI CGCG 2 cut(s) 254, 541
BstHHI GCGC 1 cut(s) 256
BstKTI GATC 4 cut(s) 343, 465, 706, 1027
BstMAI GTCTC 6 cut(s) 3, 52, 95, 175, 398, 714
BstMBI GATC 4 cut(s) 340, 462, 703, 1024
BstMCI CGRYCG 3 cut(s) 286, 378, 402
BstMWI GCNNNNNNNGC 4 cut(s) 60, 276, 285, 572
BstNI CCWGG 4 cut(s) 290, 355, 455, 698
BstNSI RCATGY 1 cut(s) 503
BstSCI CCNGG 5 cut(s) 288, 294, 353, 453, 696
BstSFI CTRYAG 1 cut(s) 854
BstUI CGCG 2 cut(s) 254, 541
BstV1I GCAGC 4 cut(s) 128, 405, 766, 956
BstV2I GAAGAC 1 cut(s) 130
BstX2I RGATCY 2 cut(s) 340, 1024
BstYI RGATCY 2 cut(s) 340, 1024
BstZI CGGCCG 1 cut(s) 283
BsuRI GGCC 5 cut(s) 98, 147, 285, 575, 682
BtsCI GGATG 1 cut(s) 450
BtsI GCAGTG 1 cut(s) 899
BtsIMutI CAGTG 2 cut(s) 435, 899
BveI ACCTGC 1 cut(s) 1048
CaiI CAGNNNCTG 2 cut(s) 318, 460
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 1 cut(s) 256
Cfr13I GGNCC 2 cut(s) 292, 680
CseI GACGC 3 cut(s) 76, 259, 469
CsiI ACCWGGT 1 cut(s) 696
Csp6I GTAC 1 cut(s) 224
CviAII CATG 5 cut(s) 500, 583, 953, 965, 1010
CviQI GTAC 1 cut(s) 224
DdeI CTNAG 2 cut(s) 730, 984
DpnI GATC 4 cut(s) 342, 464, 705, 1026
DpnII GATC 4 cut(s) 340, 462, 703, 1024
DraIII CACNNNGTG 1 cut(s) 40
EaeI YGGCCR 2 cut(s) 96, 283
EagI CGGCCG 1 cut(s) 283
Eam1104I CTCTTC 2 cut(s) 564, 864
EarI CTCTTC 2 cut(s) 564, 864
EciI GGCGGA 1 cut(s) 581
Ecl136II GAGCTC 1 cut(s) 863
EclXI CGGCCG 1 cut(s) 283
Eco147I AGGCCT 1 cut(s) 575
Eco24I GRGCYC 1 cut(s) 865
Eco31I GGTCTC 2 cut(s) 3, 175
Eco47I GGWCC 1 cut(s) 292
Eco52I CGGCCG 1 cut(s) 283
Eco53kI GAGCTC 1 cut(s) 863
Eco88I CYCGRG 1 cut(s) 864
EcoICRI GAGCTC 1 cut(s) 863
EcoRII CCWGG 4 cut(s) 288, 353, 453, 696
EcoT22I ATGCAT 1 cut(s) 970
EcoT38I GRGCYC 1 cut(s) 865
Esp3I CGTCTC 1 cut(s) 398
FaeI CATG 5 cut(s) 503, 586, 956, 968, 1013
FaiI YATR 6 cut(s) 501, 584, 909, 954, 966, 1011
FaqI GGGAC 1 cut(s) 502
FatI CATG 5 cut(s) 499, 582, 952, 964, 1009
FauI CCCGC 1 cut(s) 104
FblI GTMKAC 3 cut(s) 273, 1110, 1134
Fnu4HI GCNGC 6 cut(s) 117, 286, 419, 539, 780, 945
FokI GGATG 1 cut(s) 437
FriOI GRGCYC 1 cut(s) 865
Fsp4HI GCNGC 6 cut(s) 117, 286, 419, 539, 780, 945
FspBI CTAG 1 cut(s) 44
GlaI GCGC 1 cut(s) 255
GluI GCNGC 6 cut(s) 117, 286, 419, 539, 780, 945
GsaI CCCAGC 1 cut(s) 750
HaeIII GGCC 5 cut(s) 98, 147, 285, 575, 682
HapII CCGG 3 cut(s) 51, 295, 717
HgaI GACGC 3 cut(s) 76, 259, 469
HhaI GCGC 1 cut(s) 256
Hin1I GRCGYC 3 cut(s) 87, 270, 480
Hin1II CATG 5 cut(s) 503, 586, 956, 968, 1013
Hin6I GCGC 1 cut(s) 254
HinP1I GCGC 1 cut(s) 254
HincII GTYRAC 5 cut(s) 274, 765, 901, 1098, 1135
HindII GTYRAC 5 cut(s) 274, 765, 901, 1098, 1135
HinfI GANTC 3 cut(s) 103, 263, 350
HpaI GTTAAC 3 cut(s) 765, 901, 1098
HpaII CCGG 3 cut(s) 51, 295, 717
HphI GGTGA 2 cut(s) 26, 610
Hpy166II GTNNAC 9 cut(s) 274, 448, 765, 901, 940, 1098, 1111, 1135, 1148
Hpy188III TCNNGA 5 cut(s) 8, 209, 403, 866, 1010
Hpy8I GTNNAC 9 cut(s) 274, 448, 765, 901, 940, 1098, 1111, 1135, 1148
Hpy99I CGWCG 7 cut(s) 71, 92, 275, 278, 284, 694, 1139
HpyCH4IV ACGT 3 cut(s) 69, 135, 1137
HpyCH4V TGCA 7 cut(s) 234, 432, 645, 782, 877, 892, 968
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 276, 285, 572
HpyF3I CTNAG 2 cut(s) 730, 984
HpySE526I ACGT 3 cut(s) 69, 135, 1137
Hsp92I GRCGYC 3 cut(s) 87, 270, 480
Hsp92II CATG 5 cut(s) 503, 586, 956, 968, 1013
HspAI GCGC 1 cut(s) 254
KspAI GTTAAC 3 cut(s) 765, 901, 1098
Kzo9I GATC 4 cut(s) 340, 462, 703, 1024
LmnI GCTCC 2 cut(s) 188, 320
Lsp1109I GCAGC 4 cut(s) 128, 405, 766, 956
LweI GCATC 3 cut(s) 569, 766, 977
MabI ACCWGGT 1 cut(s) 696
MaeI CTAG 1 cut(s) 44
MaeII ACGT 3 cut(s) 69, 135, 1137
MaeIII GTNAC 3 cut(s) 209, 394, 622
MalI GATC 4 cut(s) 342, 464, 705, 1026
MboI GATC 4 cut(s) 340, 462, 703, 1024
MboII GAAGA 5 cut(s) 130, 517, 581, 881, 894
MfeI CAATTG 1 cut(s) 229
MflI RGATCY 2 cut(s) 340, 1024
MhlI GDGCHC 1 cut(s) 865
MluCI AATT 5 cut(s) 25, 229, 822, 959, 1122
MlyI GAGTC 1 cut(s) 97
MmeI TCCRAC 5 cut(s) 156, 210, 364, 713, 731
Mph1103I ATGCAT 1 cut(s) 970
MroXI GAANNNNTTC 1 cut(s) 960
MseI TTAA 7 cut(s) 330, 554, 756, 764, 900, 1097, 1125
MspI CCGG 3 cut(s) 51, 295, 717
MspR9I CCNGG 5 cut(s) 290, 296, 355, 455, 698
MunI CAATTG 1 cut(s) 229
MvaI CCWGG 4 cut(s) 290, 355, 455, 698
MvnI CGCG 2 cut(s) 254, 541
MwoI GCNNNNNNNGC 4 cut(s) 60, 276, 285, 572
NciI CCSGG 1 cut(s) 296
NdeII GATC 4 cut(s) 340, 462, 703, 1024
NlaIII CATG 5 cut(s) 503, 586, 956, 968, 1013
NlaIV GGNNCC 3 cut(s) 184, 204, 715
NmeAIII GCCGAG 2 cut(s) 87, 124
NmuCI GTSAC 3 cut(s) 209, 394, 622
NsiI ATGCAT 1 cut(s) 970
NspI RCATGY 1 cut(s) 503
PagI TCATGA 1 cut(s) 1009
PceI AGGCCT 1 cut(s) 575
PcsI WCGNNNNNNNCGW 4 cut(s) 96, 258, 267, 404
PdmI GAANNNNTTC 1 cut(s) 960
PfeI GAWTC 2 cut(s) 263, 350
PflFI GACNNNGTC 2 cut(s) 86, 1084
PkrI GCNGC 6 cut(s) 118, 287, 420, 540, 781, 946
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
Psp124BI GAGCTC 1 cut(s) 865
Psp6I CCWGG 4 cut(s) 288, 353, 453, 696
PspFI CCCAGC 1 cut(s) 746
PspGI CCWGG 4 cut(s) 288, 353, 453, 696
PspN4I GGNNCC 3 cut(s) 184, 204, 715
PspPI GGNCC 2 cut(s) 292, 680
PstNI CAGNNNCTG 2 cut(s) 318, 460
PsuI RGATCY 2 cut(s) 340, 1024
PsyI GACNNNGTC 2 cut(s) 86, 1084
RsaI GTAC 1 cut(s) 225
RsaNI GTAC 1 cut(s) 224
SacI GAGCTC 1 cut(s) 865
SalI GTCGAC 2 cut(s) 272, 1133
SaqAI TTAA 7 cut(s) 330, 554, 756, 764, 900, 1097, 1125
SatI GCNGC 6 cut(s) 117, 286, 419, 539, 780, 945
Sau3AI GATC 4 cut(s) 340, 462, 703, 1024
Sau96I GGNCC 2 cut(s) 292, 680
SchI GAGTC 1 cut(s) 97
ScrFI CCNGG 5 cut(s) 290, 296, 355, 455, 698
SduI GDGCHC 1 cut(s) 865
SexAI ACCWGGT 1 cut(s) 696
SfaNI GCATC 3 cut(s) 569, 766, 977
SfcI CTRYAG 1 cut(s) 854
SgrDI CGTCGACG 1 cut(s) 272
SinI GGWCC 1 cut(s) 292
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
Sse9I AATT 5 cut(s) 25, 229, 822, 959, 1122
SseBI AGGCCT 1 cut(s) 575
SsiI CCGC 5 cut(s) 111, 286, 374, 539, 566
SspMI CTAG 1 cut(s) 44
SstI GAGCTC 1 cut(s) 865
StuI AGGCCT 1 cut(s) 575
StyD4I CCNGG 5 cut(s) 288, 294, 353, 453, 696
TaiI ACGT 3 cut(s) 72, 138, 1140
TaqI TCGA 8 cut(s) 7, 141, 261, 273, 402, 474, 840, 1134
TaqII GACCGA 1 cut(s) 27
TasI AATT 5 cut(s) 25, 229, 822, 959, 1122
TauI GCSGC 2 cut(s) 288, 541
TfiI GAWTC 2 cut(s) 263, 350
Tru1I TTAA 7 cut(s) 330, 554, 756, 764, 900, 1097, 1125
Tru9I TTAA 7 cut(s) 330, 554, 756, 764, 900, 1097, 1125
TscAI CASTG 2 cut(s) 442, 899
TseFI GTSAC 3 cut(s) 209, 394, 622
TseI GCWGC 4 cut(s) 116, 418, 779, 944
Tsp45I GTSAC 3 cut(s) 209, 394, 622
TspDTI ATGAA 6 cut(s) 115, 571, 924, 953, 969, 1026
TspGWI ACGGA 1 cut(s) 142
TspRI CASTG 2 cut(s) 442, 899
Tth111I GACNNNGTC 2 cut(s) 86, 1084
VpaK11BI GGWCC 1 cut(s) 292
XceI RCATGY 1 cut(s) 503
XmiI GTMKAC 3 cut(s) 273, 1110, 1134
XmnI GAANNNNTTC 1 cut(s) 960
XspI CTAG 1 cut(s) 44
Zsp2I ATGCAT 1 cut(s) 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.