Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006627

Physical Location & Seq

Genomic Coordinates Reverse (-)

4094475 .. 4097079

Gene Structure 2605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G058800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCTTCTCTAAGCACCCCACTTATCTCTCTGCCACGTCACCCAAACTCTTCGTCCCCAACCTTCAGTACCGACCTTCGTTTCTCAAGCCACCCAGCTCTTTCACTAATAGACCAATGCACCAGCATAAAGCAGCTAAAGCAAGTCCATGCCCAAATGCTTCGTACAGGTGTTCTCTTTGACCCGTACTCCGCCAGCAAACTTATCACCGCCAGCGCTCTCTCCTCGTTCTCGAGTCTCGATTATGCCCGCCAGGTGTTTGATCAAATTCCGCAACCAAATGTCTACACTTGGAACACCCTCATTCGCGCTTATGCGTCTAGCTCCGACCCGGCTGAAAGCATCCTCGTATTTTTGGACATGCTTGATCACTGTTCTGAATGCCCCGATAAATATACTTACCCTTTTGCGATTAAAGCGGCTTCGGAGCTCCGGGCTTTGCAGGTTGGAAGAGGTTTTCATGGCATGGCAATAAAGGCCTCGCTTGGGTCGGATATTTATATTCTTAATTCGCTCGTTCATTTTTATGGGTCGTGTGGGGATTTGGATTTGGCACGTCGGGTTTTCATGAAGACTCCTAAAAAAGATGTTGTTTCTTGGAACTCTATGATCACAGTTTTCGCGCAGGGGAATTGCCCCCAGGAGGCATTGGAGTTGTTTAAGGAAATGGAGGCGGAGAATGTGAAGCCGAATGATGTAACGATGGTAAGCGTGTTGTCAGCTTGTGCAAAGAAGGTGGATTTGGAGTTTGGGAGGTGGGTTTGTTCACATATTCAAAGGAATGAAATTAAAGAGAACTTGACTTTGAACAATGCTATGCTTGATATGTACGTGAAATGTGGGAGCGTTGATGATGCAAAAAGATTGTTTGATAGGATGCCAGAGAAGGATATTGTTTCGTGGACTACCATGCTTGATGGGTATGCTCAGTTGGGGAACTATGAGGAGGCTTGGCGGGTTTTTGCCGCAATGCCTAGTCAAGACATTGCTGCTTGGAATGTGCTCATTTCTTCTTATGAACAAAGTGGTAAGCCAAAGGAGGCTTTGGCTGTTTTTAATGAGTTGCAGAAAAGCAAGAGTCCTAAACCTGATGAAGTCACACTGGTTAGCACTCTAGCAGCGTGTGCTCAATTAGGAGCAATTGATCTTGGTGGGTGGATACATGTTTACATAAAGAAGCAGGTGATGAAGTTGAATTGTCACCTCACAACCTCGCTTATTGATATGTATGCAAAGTGTGGGGATCTAGATAAGGCACTTGAGGTATTTAATTCGGTAGAGAGGAGAGATGTATTCGTCTGGAGTGCCATGATTGCTGGTTTGGCGATGCATGGGCAAGGGAGAGATGCATTGGAGTTTTTCTCAAAAATGCTAGAAGCTAAGGTGAAGCCCAATGCTGTGACATTTACCAATGTATTATGCGCTTGTAGCCACACAGGTTTGGTGGACGAGGGAAGAACATTTTTCTATCAGATGGAGCCAGTTTACGGGGTTGTGCCTGGAATAAAGCACTATGCTTGCATGGTCGATATTCTTGGTCGTTCTGGAAATTTGGACGAAGCTGTAGAGCTGATAGAAAAAATGCCAATACCTCCCACTGCTTCTGTATGGGGGGCTCTTCTTGGGGCCTGTAAACTTCATGGGAATGTTGTGCTTGCTGAAAAAGCTTGTAGTCATTTGCTTGAGTTGGATCCCAGAAACCACGGAGCCTATGTACTCTTATCAAATATCTATGCCGAAACAGGGAAATGGGATGAAGTTTCTGGGTTAAGGAAGCATATGCGAGATGCAGGAATAAAGAAAGAACCAGGTTGTAGCTCAATCGAAGTCAATGGTAGTGTTCATGAATTTCTTGTTGGCGATAATTCTCACCCTCTATGCAAGGAAATCTACTCAAAGTTGGATGAGATGGCACTGAGATTGAAGTCAAACGGATATGTGCCAAACAAGTCACATCTGCTGCAATTTGTTGAGGAAGAAGACATGAAGGACCATGCCCTAATCCTTCACAGTGAGAAATTAGCCATTGCCTTTGGGCTTATTAGCTTGAGTCCATCTCAACCAATTCAGGTTGTGAAGAATCTTCGTGTTTGCGGAGACTGCCACTCAGTTGCTAAACTTATATCTAAGCTTTATGATAGGGAGATATTGCTGAGAGATCGATATCGGTTTCATCATTTTAGAGACGGGCACTGCTCATGTAATGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

739

Amino Acids

82.3

Weight (kDa)

6.28

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29760
fragaria_vesca	FvH4_3g38420
malus_domestica	MD03G1072100.v1.1 MD11G1076100.v1.1 MD11G1076300.v1.1 MD11G1076700.v1.1
prunus_persica	Prupe.6G058800_v2.0.a1
pyrus_communis	pycom03g05830 pycom12g05280
rosa_chinensis	RchiOBHm_Chr5g0069041 RchiOBHm_Chr5g0069081
rosa_laevigata	RLG00000017743 RLG00000036033
rosa_multiflora	Rmu_co8508453.1_g000001 Rmu_sc0000853.1_g000010 Rmu_sc0000853.1_g000011 Rmu_sc0000936.1_g000009
rosa_roxburghii	Rroxscaffold_1G00011680
rosa_rugosa	Rorug05G0395900
rosa_samantha	Rh5AG452500 Rh5AG482500 Rh5BG471800 Rh5BG503600 Rh5CG494200
rosa_wichuraiana	Rw0G006080 Rw5G042280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1171
Acc36I	ACCTGC	2 cut(s)	433, 1171
AccI	GTMKAC	1 cut(s)	285
AccII	CGCG	2 cut(s)	309, 623
AciI	CCGC	9 cut(s)	192, 210, 250, 272, 419, 674, 955, 966, 2094
AclWI	GGATC	3 cut(s)	1251, 1685, 1698
AcsI	RAATTY	3 cut(s)	267, 1549, 1847
AcuI	CTGAAG	1 cut(s)	49
AfaI	GTAC	5 cut(s)	70, 166, 188, 830, 1716
AfeI	AGCGCT	1 cut(s)	217
AfiI	CCNNNNNNNGG	4 cut(s)	486, 643, 1487, 1743
AflIII	ACRYGT	1 cut(s)	1162
AgsI	TTSAA	4 cut(s)	776, 808, 1195, 1924
AjiI	CACGTC	2 cut(s)	38, 557
AjnI	CCWGG	4 cut(s)	252, 639, 1498, 1807
AjuI	GAANNNNNNNTTGG	4 cut(s)	725, 757, 1839, 1871
Alw21I	GWGCWC	3 cut(s)	432, 1005, 1129
Alw26I	GTCTC	3 cut(s)	242, 2091, 2178
AlwI	GGATC	3 cut(s)	1251, 1685, 1698
Ama87I	CYCGRG	1 cut(s)	232
Aor51HI	AGCGCT	1 cut(s)	217
AoxI	GGCC	2 cut(s)	477, 1626
ApeKI	GCWGC	4 cut(s)	133, 989, 1118, 1960
ApoI	RAATTY	3 cut(s)	267, 1549, 1847
ArsI	GACNNNNNNTTYG	2 cut(s)	38, 70
AspLEI	GCGC	4 cut(s)	218, 311, 625, 1424
AspS9I	GGNCC	2 cut(s)	1626, 1990
AsuC2I	CCSGG	2 cut(s)	332, 434
AsuHPI	GGTGA	6 cut(s)	32, 199, 1193, 1195, 1396, 1862
AvaI	CYCGRG	1 cut(s)	232
AvaII	GGWCC	1 cut(s)	1990
BaeGI	GKGCMC	1 cut(s)	2193
BamHI	GGATCC	1 cut(s)	1690
BanII	GRGCYC	2 cut(s)	432, 1618
BbsI	GAAGAC	2 cut(s)	578, 1986
Bbv12I	GWGCWC	3 cut(s)	432, 1005, 1129
BbvI	GCAGC	4 cut(s)	145, 976, 1130, 1947
BccI	CCATC	5 cut(s)	697, 911, 1468, 1903, 2062
BciT130I	CCWGG	4 cut(s)	254, 641, 1500, 1809
BciVI	GTATCC	1 cut(s)	1152
BclI	TGATCA	3 cut(s)	262, 367, 609
BcnI	CCSGG	2 cut(s)	332, 434
BcoDI	GTCTC	3 cut(s)	242, 2091, 2178
BfaI	CTAG	5 cut(s)	321, 975, 1115, 1247, 1373
BfmI	CTRYAG	1 cut(s)	1563
BfoI	RGCGCY	1 cut(s)	219
BfuAI	ACCTGC	2 cut(s)	433, 1171
BfuI	GTATCC	1 cut(s)	1152
BisI	GCNGC	6 cut(s)	134, 420, 966, 990, 1119, 1961
BlsI	GCNGC	6 cut(s)	135, 421, 967, 991, 1120, 1962
Bme1390I	CCNGG	6 cut(s)	254, 332, 434, 641, 1500, 1809
Bme18I	GGWCC	1 cut(s)	1990
BmeT110I	CYCGRG	1 cut(s)	232
BmgBI	CACGTC	2 cut(s)	38, 557
BmgT120I	GGNCC	2 cut(s)	1626, 1990
BmiI	GGNNCC	4 cut(s)	1479, 1627, 1692, 1708
BmrFI	CCNGG	6 cut(s)	254, 332, 434, 641, 1500, 1809
BmsI	GCATC	6 cut(s)	351, 844, 867, 1317, 1336, 1777
BpiI	GAAGAC	2 cut(s)	578, 1986
BplI	GAGNNNNNCTC	4 cut(s)	1346, 1378, 2041, 2073
BpmI	CTGGAG	1 cut(s)	1321
Bpu10I	CCTNAGC	1 cut(s)	1380
BpuEI	CTTGAG	4 cut(s)	70, 1280, 1703, 2068
BpuMI	CCSGG	2 cut(s)	332, 434
Bsa29I	ATCGAT	1 cut(s)	2161
BsaAI	YACGTR	1 cut(s)	832
BsaBI	GATNNNNATC	1 cut(s)	2163
BsaJI	CCNNGG	2 cut(s)	639, 1702
BsaXI	ACNNNNNCTCC	4 cut(s)	173, 203, 1698, 1728
Bsc4I	CCNNNNNNNGG	4 cut(s)	486, 643, 1487, 1743
Bse1I	ACTGG	2 cut(s)	1107, 1481
Bse3DI	GCAATG	3 cut(s)	975, 984, 2025
Bse8I	GATNNNNATC	1 cut(s)	2163
BseBI	CCWGG	4 cut(s)	254, 641, 1500, 1809
BseCI	ATCGAT	1 cut(s)	2161
BseDI	CCNNGG	2 cut(s)	639, 1702
BseGI	GGATG	4 cut(s)	342, 882, 1759, 1909
BseJI	GATNNNNATC	1 cut(s)	2163
BseLI	CCNNNNNNNGG	4 cut(s)	486, 643, 1487, 1743
BseMI	GCAATG	3 cut(s)	975, 984, 2025
BseMII	CTCAG	4 cut(s)	941, 1907, 2121, 2144
BseNI	ACTGG	2 cut(s)	1107, 1481
BseRI	GAGGAG	3 cut(s)	214, 959, 1297
BseSI	GKGCMC	1 cut(s)	2193
BseXI	GCAGC	4 cut(s)	145, 976, 1130, 1947
BseYI	CCCAGC	1 cut(s)	94
Bsh1236I	CGCG	2 cut(s)	309, 623
BshFI	GGCC	2 cut(s)	479, 1628
BshVI	ATCGAT	1 cut(s)	2161
BsiHKAI	GWGCWC	3 cut(s)	432, 1005, 1129
BsiHKCI	CYCGRG	1 cut(s)	232
BsiSI	CCGG	2 cut(s)	332, 433
BslFI	GGGAC	1 cut(s)	40
BslI	CCNNNNNNNGG	4 cut(s)	486, 643, 1487, 1743
BsmAI	GTCTC	3 cut(s)	242, 2091, 2178
BsmBI	CGTCTC	1 cut(s)	2178
BsmFI	GGGAC	1 cut(s)	40
BsmI	GAATGC	1 cut(s)	386
BsnI	GGCC	2 cut(s)	479, 1628
BsoBI	CYCGRG	1 cut(s)	232
Bsp1286I	GDGCHC	5 cut(s)	432, 1005, 1129, 1618, 2193
Bsp143I	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
BspACI	CCGC	9 cut(s)	192, 210, 250, 272, 419, 674, 955, 966, 2094
BspANI	GGCC	2 cut(s)	479, 1628
BspCNI	CTCAG	4 cut(s)	940, 1908, 2120, 2145
BspDI	ATCGAT	1 cut(s)	2161
BspFNI	CGCG	2 cut(s)	309, 623
BspHI	TCATGA	2 cut(s)	567, 1843
BspLI	GGNNCC	4 cut(s)	1479, 1627, 1692, 1708
BspMI	ACCTGC	2 cut(s)	433, 1171
BspPI	GGATC	3 cut(s)	1251, 1685, 1698
BspQI	GCTCTTC	1 cut(s)	1623
BsrDI	GCAATG	3 cut(s)	975, 984, 2025
BsrI	ACTGG	2 cut(s)	1107, 1481
BssECI	CCNNGG	2 cut(s)	639, 1702
BssMI	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
Bst2UI	CCWGG	4 cut(s)	254, 641, 1500, 1809
Bst4CI	ACNGT	3 cut(s)	374, 616, 2012
Bst6I	CTCTTC	3 cut(s)	55, 445, 1623
BstAPI	GCANNNNNTGC	1 cut(s)	1124
BstBAI	YACGTR	1 cut(s)	832
BstC8I	GCNNGC	5 cut(s)	196, 214, 250, 1519, 1656
BstDEI	CTNAG	7 cut(s)	11, 927, 1380, 1916, 2107, 2127, 2153
BstDSI	CCRYGG	1 cut(s)	1702
BstF5I	GGATG	4 cut(s)	342, 882, 1759, 1909
BstFNI	CGCG	2 cut(s)	309, 623
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	4 cut(s)	218, 311, 625, 1424
BstKTI	GATC	7 cut(s)	265, 370, 612, 1147, 1246, 1693, 2161
BstMAI	GTCTC	3 cut(s)	242, 2091, 2178
BstMBI	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
BstMWI	GCNNNNNNNGC	9 cut(s)	139, 416, 476, 1124, 1313, 1322, 1428, 1664, 2100
BstNI	CCWGG	4 cut(s)	254, 641, 1500, 1809
BstNSI	RCATGY	2 cut(s)	364, 1166
BstSCI	CCNGG	6 cut(s)	252, 330, 432, 639, 1498, 1807
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	1 cut(s)	2193
BstUI	CGCG	2 cut(s)	309, 623
BstV1I	GCAGC	4 cut(s)	145, 976, 1130, 1947
BstV2I	GAAGAC	2 cut(s)	578, 1986
BstX2I	RGATCY	2 cut(s)	1243, 1690
BstYI	RGATCY	2 cut(s)	1243, 1690
Bsu15I	ATCGAT	1 cut(s)	2161
BsuI	GTATCC	1 cut(s)	1152
BsuRI	GGCC	2 cut(s)	479, 1628
BsuTUI	ATCGAT	1 cut(s)	2161
BtgI	CCRYGG	1 cut(s)	1702
BtgZI	GCGATG	1 cut(s)	1340
BtrI	CACGTC	2 cut(s)	38, 557
BtsCI	GGATG	4 cut(s)	342, 882, 1759, 1909
BtsI	GCAGTG	2 cut(s)	1596, 2191
BtsIMutI	CAGTG	6 cut(s)	370, 1100, 1596, 1913, 2017, 2191
BveI	ACCTGC	2 cut(s)	433, 1171
Cac8I	GCNNGC	5 cut(s)	196, 214, 250, 1519, 1656
CciI	TCATGA	2 cut(s)	567, 1843
CfoI	GCGC	4 cut(s)	218, 311, 625, 1424
Cfr13I	GGNCC	2 cut(s)	1626, 1990
ClaI	ATCGAT	1 cut(s)	2161
CseI	GACGC	1 cut(s)	306
CsiI	ACCWGGT	1 cut(s)	1807
Csp6I	GTAC	5 cut(s)	69, 165, 187, 829, 1715
CspCI	CAANNNNNGTGG	2 cut(s)	717, 752
CviQI	GTAC	5 cut(s)	69, 165, 187, 829, 1715
DdeI	CTNAG	7 cut(s)	11, 927, 1380, 1916, 2107, 2127, 2153
DpnI	GATC	7 cut(s)	264, 369, 611, 1146, 1245, 1692, 2160
DpnII	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
Eam1104I	CTCTTC	3 cut(s)	55, 445, 1623
EarI	CTCTTC	3 cut(s)	55, 445, 1623
EciI	GGCGGA	2 cut(s)	181, 689
Ecl136II	GAGCTC	1 cut(s)	430
Eco147I	AGGCCT	1 cut(s)	479
Eco24I	GRGCYC	2 cut(s)	432, 1618
Eco32I	GATATC	1 cut(s)	2165
Eco47I	GGWCC	1 cut(s)	1990
Eco47III	AGCGCT	1 cut(s)	217
Eco53kI	GAGCTC	1 cut(s)	430
Eco57I	CTGAAG	1 cut(s)	49
Eco88I	CYCGRG	1 cut(s)	232
EcoICRI	GAGCTC	1 cut(s)	430
EcoO109I	RGGNCCY	1 cut(s)	1626
EcoRII	CCWGG	4 cut(s)	252, 639, 1498, 1807
EcoRV	GATATC	1 cut(s)	2165
EcoT22I	ATGCAT	2 cut(s)	1332, 1351
EcoT38I	GRGCYC	2 cut(s)	432, 1618
Esp3I	CGTCTC	1 cut(s)	2178
FaqI	GGGAC	1 cut(s)	40
FauI	CCCGC	2 cut(s)	257, 948
FauNDI	CATATG	1 cut(s)	1779
FbaI	TGATCA	3 cut(s)	262, 367, 609
FblI	GTMKAC	1 cut(s)	285
Fnu4HI	GCNGC	6 cut(s)	134, 420, 966, 990, 1119, 1961
FokI	GGATG	4 cut(s)	329, 889, 1766, 1916
FriOI	GRGCYC	2 cut(s)	432, 1618
Fsp4HI	GCNGC	6 cut(s)	134, 420, 966, 990, 1119, 1961
FspBI	CTAG	5 cut(s)	321, 975, 1115, 1247, 1373
GlaI	GCGC	4 cut(s)	217, 310, 624, 1423
GluI	GCNGC	6 cut(s)	134, 420, 966, 990, 1119, 1961
GsaI	CCCAGC	1 cut(s)	98
GsuI	CTGGAG	1 cut(s)	1321
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	2 cut(s)	479, 1628
HapII	CCGG	2 cut(s)	332, 433
HgaI	GACGC	1 cut(s)	306
HhaI	GCGC	4 cut(s)	218, 311, 625, 1424
Hin6I	GCGC	4 cut(s)	216, 309, 623, 1422
HinP1I	GCGC	4 cut(s)	216, 309, 623, 1422
HindIII	AAGCTT	2 cut(s)	1665, 2129
HinfI	GANTC	5 cut(s)	235, 574, 1078, 2050, 2080
HpaII	CCGG	2 cut(s)	332, 433
HphI	GGTGA	6 cut(s)	32, 199, 1193, 1195, 1396, 1862
Hpy166II	GTNNAC	7 cut(s)	286, 767, 903, 1168, 1447, 1486, 1634
Hpy188I	TCNGA	5 cut(s)	328, 379, 427, 493, 1473
Hpy188III	TCNNGA	8 cut(s)	232, 239, 568, 980, 1247, 1300, 1545, 1844
Hpy8I	GTNNAC	7 cut(s)	286, 767, 903, 1168, 1447, 1486, 1634
Hpy99I	CGWCG	1 cut(s)	561
HpyAV	CCTTC	6 cut(s)	73, 86, 727, 880, 1981, 2015
HpyCH4III	ACNGT	3 cut(s)	374, 616, 2012
HpyCH4IV	ACGT	3 cut(s)	37, 556, 831
HpyF10VI	GCNNNNNNNGC	9 cut(s)	139, 416, 476, 1124, 1313, 1322, 1428, 1664, 2100
HpyF3I	CTNAG	7 cut(s)	11, 927, 1380, 1916, 2107, 2127, 2153
HpySE526I	ACGT	3 cut(s)	37, 556, 831
HspAI	GCGC	4 cut(s)	216, 309, 623, 1422
Ksp22I	TGATCA	3 cut(s)	262, 367, 609
Kzo9I	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
LguI	GCTCTTC	1 cut(s)	1623
LmnI	GCTCC	7 cut(s)	329, 427, 435, 843, 1136, 1477, 1706
Lsp1109I	GCAGC	4 cut(s)	145, 976, 1130, 1947
LweI	GCATC	6 cut(s)	351, 844, 867, 1317, 1336, 1777
MabI	ACCWGGT	1 cut(s)	1807
MaeI	CTAG	5 cut(s)	321, 975, 1115, 1247, 1373
MaeII	ACGT	3 cut(s)	37, 556, 831
MaeIII	GTNAC	6 cut(s)	38, 697, 1096, 1199, 1399, 1950
MalI	GATC	7 cut(s)	264, 369, 611, 1146, 1245, 1692, 2160
MboI	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
MfeI	CAATTG	1 cut(s)	1140
MflI	RGATCY	2 cut(s)	1243, 1690
MhlI	GDGCHC	5 cut(s)	432, 1005, 1129, 1618, 2193
MlyI	GAGTC	4 cut(s)	244, 568, 1087, 2059
MmeI	TCCRAC	5 cut(s)	351, 427, 471, 1668, 1881
Mph1103I	ATGCAT	2 cut(s)	1332, 1351
MseI	TTAA	7 cut(s)	414, 507, 660, 789, 1056, 1269, 1769
MslI	CAYNNNNRTG	2 cut(s)	525, 1644
MspI	CCGG	2 cut(s)	332, 433
MspR9I	CCNGG	6 cut(s)	254, 332, 434, 641, 1500, 1809
MunI	CAATTG	1 cut(s)	1140
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	4 cut(s)	254, 641, 1500, 1809
MvnI	CGCG	2 cut(s)	309, 623
MwoI	GCNNNNNNNGC	9 cut(s)	139, 416, 476, 1124, 1313, 1322, 1428, 1664, 2100
NciI	CCSGG	2 cut(s)	332, 434
NdeI	CATATG	1 cut(s)	1779
NdeII	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
NlaIV	GGNNCC	4 cut(s)	1479, 1627, 1692, 1708
NmuCI	GTSAC	5 cut(s)	38, 1096, 1199, 1399, 1950
NsiI	ATGCAT	2 cut(s)	1332, 1351
NspI	RCATGY	2 cut(s)	364, 1166
PaeR7I	CTCGAG	1 cut(s)	232
PagI	TCATGA	2 cut(s)	567, 1843
PaqCI	CACCTGC	1 cut(s)	1171
PceI	AGGCCT	1 cut(s)	479
PciI	ACATGT	1 cut(s)	1162
PciSI	GCTCTTC	1 cut(s)	1623
PctI	GAATGC	1 cut(s)	386
PfeI	GAWTC	1 cut(s)	2080
PkrI	GCNGC	6 cut(s)	135, 421, 967, 991, 1120, 1962
PleI	GAGTC	4 cut(s)	243, 568, 1086, 2058
PpsI	GAGTC	4 cut(s)	243, 568, 1086, 2058
Ppu21I	YACGTR	1 cut(s)	832
PscI	ACATGT	1 cut(s)	1162
Psp124BI	GAGCTC	1 cut(s)	432
Psp6I	CCWGG	4 cut(s)	252, 639, 1498, 1807
PspFI	CCCAGC	1 cut(s)	94
PspGI	CCWGG	4 cut(s)	252, 639, 1498, 1807
PspN4I	GGNNCC	4 cut(s)	1479, 1627, 1692, 1708
PspPI	GGNCC	2 cut(s)	1626, 1990
PsuI	RGATCY	2 cut(s)	1243, 1690
RsaI	GTAC	5 cut(s)	70, 166, 188, 830, 1716
RsaNI	GTAC	5 cut(s)	69, 165, 187, 829, 1715
RseI	CAYNNNNRTG	2 cut(s)	525, 1644
SacI	GAGCTC	1 cut(s)	432
SapI	GCTCTTC	1 cut(s)	1623
SaqAI	TTAA	7 cut(s)	414, 507, 660, 789, 1056, 1269, 1769
SatI	GCNGC	6 cut(s)	134, 420, 966, 990, 1119, 1961
Sau3AI	GATC	7 cut(s)	262, 367, 609, 1144, 1243, 1690, 2158
Sau96I	GGNCC	2 cut(s)	1626, 1990
SchI	GAGTC	4 cut(s)	244, 568, 1087, 2059
ScrFI	CCNGG	6 cut(s)	254, 332, 434, 641, 1500, 1809
SduI	GDGCHC	5 cut(s)	432, 1005, 1129, 1618, 2193
SexAI	ACCWGGT	1 cut(s)	1807
SfaNI	GCATC	6 cut(s)	351, 844, 867, 1317, 1336, 1777
SfcI	CTRYAG	1 cut(s)	1563
Sfr274I	CTCGAG	1 cut(s)	232
SinI	GGWCC	1 cut(s)	1990
SlaI	CTCGAG	1 cut(s)	232
SmiMI	CAYNNNNRTG	2 cut(s)	525, 1644
SmlI	CTYRAG	5 cut(s)	85, 232, 1259, 1682, 2047
SmoI	CTYRAG	5 cut(s)	85, 232, 1259, 1682, 2047
SseBI	AGGCCT	1 cut(s)	479
SsiI	CCGC	9 cut(s)	192, 210, 250, 272, 419, 674, 955, 966, 2094
SspMI	CTAG	5 cut(s)	321, 975, 1115, 1247, 1373
SstI	GAGCTC	1 cut(s)	432
StuI	AGGCCT	1 cut(s)	479
StyD4I	CCNGG	6 cut(s)	252, 330, 432, 639, 1498, 1807
TaaI	ACNGT	3 cut(s)	374, 616, 2012
TaiI	ACGT	3 cut(s)	40, 559, 834
TaqI	TCGA	5 cut(s)	233, 240, 1527, 1824, 2161
TatI	WGTACW	1 cut(s)	1714
TauI	GCSGC	2 cut(s)	422, 968
TfiI	GAWTC	1 cut(s)	2080
Tru1I	TTAA	7 cut(s)	414, 507, 660, 789, 1056, 1269, 1769
Tru9I	TTAA	7 cut(s)	414, 507, 660, 789, 1056, 1269, 1769
TscAI	CASTG	6 cut(s)	377, 1107, 1603, 1920, 2017, 2198
TseFI	GTSAC	5 cut(s)	38, 1096, 1199, 1399, 1950
TseI	GCWGC	4 cut(s)	133, 989, 1118, 1960
Tsp45I	GTSAC	5 cut(s)	38, 1096, 1199, 1399, 1950
TspGWI	ACGGA	2 cut(s)	1719, 1947
TspRI	CASTG	6 cut(s)	377, 1107, 1603, 1920, 2017, 2198
VpaK11BI	GGWCC	1 cut(s)	1990
XapI	RAATTY	3 cut(s)	267, 1549, 1847
XbaI	TCTAGA	1 cut(s)	1246
XceI	RCATGY	2 cut(s)	364, 1166
XhoI	CTCGAG	1 cut(s)	232
XmiI	GTMKAC	1 cut(s)	285
XspI	CTAG	5 cut(s)	321, 975, 1115, 1247, 1373
Zsp2I	ATGCAT	2 cut(s)	1332, 1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.