Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0006627

Physical Location & Seq

Genomic Coordinates Forward (+)

74157197 .. 74159403

Gene Structure 2207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G042280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCAACTCTAGGCACCCCAGTCCCACGTCATCCCACCACTCCCTCCCCAACCGTCAATAACGACCTTCGCTTCCCAACCCAACCGATTCTCCCACTGATAGACCAATGCACCACCATCAACCAGCTCAAGCAAGTCCATGCCCAAATGCTCAAAACAGCCCTATTCTTCGACCCTTATTCCGCCAGTAAGCTCATCACGGCTGCTGCGCTCTCTTCCTTCTCGAGCCTCGACTATGCACGCCAAGTGTTCGACGAAATTCCTGACCCAAATCTGTTCACTTGGAACGCCCTCATTCGCGCGTACGCGTCCAGCCCCGACCCAGTTGAAAGCATTGTCGTATTTCTGCAGATGCTCGACGAATGTGATGAGTGCCCCAATAAGTTTACTTTCCCTTTTTTGCTCAAGGCCGCCTCGGAGCTCCGGGCTTCCAAGGTTGGGAGAGGTTTTCATGCCATGGTGATAAAAGCCGAGCTGGGTTCGGATGTTTATATTGTTAATTCGCTCATTCACTTTTATGGGTCGTGCGGGGATTTGGATTTGGCGCGTTTGGTGTTTTTGAAGACTTACAAAAAGGATGTTGTTACTTGGAATTCTGTTATCACGGCTTTTGCTCAGGGGAATTGCCCTGAGGTGGCGTTGGAGTTGTTTAAGGAAATGGAGGCGGAGAATATGAGGCCGAATGATGTCACCATGGTTAGTGTCTTGTCAGCTTGCGCAAAGAAGGCGGATTTGGAGTTTGGGAGGTGGGTTTGTTTGAATGTTGAAAGGCATGGAGTTGAAGAGAACTTGACTTTGAATAATGCTATGCTAGATATGTATGTGAAATGCGGGAGTGTTGAAGATGCGGAGAGATTGTTTGGAAGGATGCCGGAGAAGGACGTTGTGTCGTGGACTACTATGCTTGATGGGTATGCTCGGATGGGGAAATATGATGAGGCTAGGCGTGTTTTTGCTGCCATGCCTAGTCAGGATATTGCTGCGTGGAATGTCCTCATTTCATCTTATGAACAGAATGGCAGGCCGAAAGAGGCTTTAGCTGTCTTCCATGAGTTGCAGAAGAACAAGGGTCCCAAGCCTGATGAGGTTACTCTAGTTAGTACTCTGGCAGCGTGTGCTCAATTGGGAGCGATTGATCTTGGCGGCTGGATACATGTTTACGTAAAGAAGCAGGGAATGAAGTTGAATTGTCACCTCACAACCTCGCTTATCGACATGTATGCAAAATGCGGAAATCTAGAGAAGGCACTTGAGGTTTTTAATTCGGTGGAGATGAGAGACGTATTTGTTTGGAGCGCCATGATTGCTGCTTTGGCAATGCATGGTCAGGGGAGGGATGCATTGCACTTTTTCTCAAAAATGCTAGAAGCTAAGGTGAAGCCAAATGCTGTGACATTTACTAACATATTATGCGCATGTAGCCATGCAGGATTGGTGGATGAGGGAAGAATATTTTTCTATCAAATGGAGCGAGTTTATGGAGTTGTGCCTGGAATAAAGCACTATGCGTGCATGGTTGACATTCTTGGTCGTTCAGGTAATCTGGAGGAAGCTGCAGAACTGATAGAGAAAATGCCAATTTCTCCCACTCCTTCTGTATGGGGGGCTCTGCTTGGTGCATGTACGCGCCATGGGAATATTGCACTTGCTGAAAAGGCTTGTAGCCATTTGCTCGACTTGGATCCCAGAAATCATGGAGCCTATCTCATGCGAGATTCTGGAATAAAGAAAGAACCTGGTTGTAGCTCAATTGAAATCAACGGTAGTGTTCATGAATTTCTAGTTGGTGATAATACTCATCCTTTATCCAAAGATATCTACTCAAAGTTGGATGAGATAGCAGGGAGATTGAAGTCAATCGGATATGTGCCAAACAAGTCACACCTACTGCAATTTGTTGAGGAAGAGGACATGAAGGAACAGGCCCTAATTCTTCATAGTGAGAAACTAGCGATTGCCTTTGGACTTATTAGCTCCAAGCCATCTCAATCAATTCGCGTTGTGAAGAATCTTCGTGTTTGTGGAGACTGCCACTCAGTTGCTAAGCTTATATCGAAGCTTTATAATAGGGAGATATTTCTGAGAGATCGATATCGGTTTCATCATTTTAGAGAGGGGCATTGTTCATGTAATGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

714

Amino Acids

79.67

Weight (kDa)

6.3

Isoelectric Point (pI)

43.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	192 - 241	2e-11	PPR repeat family
PPR	PF01535	195 - 224	1.6e-06	PPR repeat
PPR_2	PF13041	293 - 324	3.4e-06	PPR repeat family
PPR	PF01535	296 - 324	1.1e-06	PPR repeat
PPR_2	PF13041	325 - 373	4.3e-08	PPR repeat family
PPR	PF01535	328 - 355	4.3e-06	PPR repeat
PPR_2	PF13041	426 - 474	3.9e-10	PPR repeat family
Eplus_motif	PF20430	590 - 616	6e-08	E+ motif
DYW_deaminase	PF14432	621 - 714	3.6e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006627)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29760
fragaria_vesca	FvH4_3g38420
malus_domestica	MD03G1072100.v1.1 MD11G1076100.v1.1 MD11G1076300.v1.1 MD11G1076700.v1.1
prunus_persica	Prupe.6G058800_v2.0.a1
pyrus_communis	pycom03g05830 pycom12g05280
rosa_chinensis	RchiOBHm_Chr5g0069041 RchiOBHm_Chr5g0069081
rosa_laevigata	RLG00000017743 RLG00000036033
rosa_multiflora	Rmu_co8508453.1_g000001 Rmu_sc0000853.1_g000010 Rmu_sc0000853.1_g000011 Rmu_sc0000936.1_g000009
rosa_roxburghii	Rroxscaffold_1G00011680
rosa_rugosa	Rorug05G0395900
rosa_samantha	Rh5AG452500 Rh5AG482500 Rh5BG471800 Rh5BG503600 Rh5CG494200
rosa_wichuraiana	Rw0G006080 Rw5G042280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2064
Acc16I	TGCGCA	2 cut(s)	718, 1414
AccB1I	GGYRCC	1 cut(s)	14
AccII	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
AciI	CCGC	9 cut(s)	183, 411, 528, 665, 728, 831, 848, 1143, 1230
AclWI	GGATC	2 cut(s)	1676, 1689
AcsI	RAATTY	3 cut(s)	258, 592, 1775
AfaI	GTAC	3 cut(s)	305, 1102, 1624
AfiI	CCNNNNNNNGG	2 cut(s)	438, 634
AflIII	ACRYGT	3 cut(s)	306, 1153, 1215
AhdI	GACNNNNNGTC	1 cut(s)	886
AjiI	CACGTC	1 cut(s)	29
AjnI	CCWGG	2 cut(s)	1489, 1735
AjuI	GAANNNNNNNTTGG	4 cut(s)	716, 748, 1767, 1799
Alw21I	GWGCWC	2 cut(s)	423, 1120
Alw26I	GTCTC	2 cut(s)	1272, 2019
AlwI	GGATC	2 cut(s)	1676, 1689
Ama87I	CYCGRG	1 cut(s)	223
AoxI	GGCC	4 cut(s)	408, 677, 1022, 1923
ApeKI	GCWGC	7 cut(s)	203, 206, 956, 980, 1109, 1307, 1553
ApoI	RAATTY	3 cut(s)	258, 592, 1775
AspLEI	GCGC	7 cut(s)	211, 302, 547, 719, 1298, 1415, 1629
AspS9I	GGNCC	2 cut(s)	1070, 1924
AsuC2I	CCSGG	1 cut(s)	425
AsuHPI	GGTGA	5 cut(s)	472, 682, 1184, 1387, 1799
AvaI	CYCGRG	1 cut(s)	223
AvaII	GGWCC	1 cut(s)	1070
AxyI	CCTNAGG	1 cut(s)	630
BaeGI	GKGCMC	1 cut(s)	377
BamHI	GGATCC	1 cut(s)	1681
BanI	GGYRCC	1 cut(s)	14
BanII	GRGCYC	2 cut(s)	423, 1609
BbsI	GAAGAC	2 cut(s)	569, 1036
Bbv12I	GWGCWC	2 cut(s)	423, 1120
BbvI	GCAGC	7 cut(s)	190, 193, 943, 967, 1121, 1294, 1540
BccI	CCATC	4 cut(s)	125, 902, 916, 1990
BceAI	ACGGC	2 cut(s)	216, 621
BcgI	CGANNNNNNTGC	2 cut(s)	1202, 1236
BciT130I	CCWGG	2 cut(s)	1491, 1737
BciVI	GTATCC	1 cut(s)	1143
BcnI	CCSGG	1 cut(s)	425
BcoDI	GTCTC	2 cut(s)	1272, 2019
BfaI	CTAG	9 cut(s)	11, 812, 942, 966, 1094, 1238, 1364, 1781, 1949
BfmI	CTRYAG	2 cut(s)	347, 1554
BfoI	RGCGCY	1 cut(s)	1299
BfuI	GTATCC	1 cut(s)	1143
BisI	GCNGC	9 cut(s)	204, 207, 411, 957, 981, 1110, 1144, 1308, 1554
BlpI	GCTNAGC	1 cut(s)	2043
BlsI	GCNGC	9 cut(s)	205, 208, 412, 958, 982, 1111, 1145, 1309, 1555
BmcAI	AGTACT	1 cut(s)	1102
Bme1390I	CCNGG	3 cut(s)	425, 1491, 1737
Bme18I	GGWCC	1 cut(s)	1070
BmeRI	GACNNNNNGTC	1 cut(s)	886
BmeT110I	CYCGRG	1 cut(s)	223
BmgBI	CACGTC	1 cut(s)	29
BmgT120I	GGNCC	2 cut(s)	1070, 1924
BmiI	GGNNCC	5 cut(s)	16, 1071, 1072, 1683, 1699
BmrFI	CCNGG	3 cut(s)	425, 1491, 1737
BmrI	ACTGGG	2 cut(s)	14, 317
BmsI	GCATC	4 cut(s)	342, 835, 858, 1327
BmuI	ACTGGG	2 cut(s)	14, 317
BpiI	GAAGAC	2 cut(s)	569, 1036
BplI	GAGNNNNNCTC	2 cut(s)	1689, 1721
BpmI	CTGGAG	1 cut(s)	1565
Bpu10I	CCTNAGC	2 cut(s)	615, 1371
Bpu1102I	GCTNAGC	1 cut(s)	2043
BpuEI	CTTGAG	3 cut(s)	113, 389, 1271
BpuMI	CCSGG	1 cut(s)	425
Bsa29I	ATCGAT	1 cut(s)	2089
BsaAI	YACGTR	1 cut(s)	1162
BsaBI	GATNNNNATC	1 cut(s)	2091
BsaJI	CCNNGG	5 cut(s)	414, 432, 456, 693, 1630
BsaXI	ACNNNNNCTCC	4 cut(s)	75, 105, 842, 872
Bsc4I	CCNNNNNNNGG	2 cut(s)	438, 634
Bse1I	ACTGG	4 cut(s)	20, 186, 323, 2144
Bse21I	CCTNAGG	1 cut(s)	630
Bse3DI	GCAATG	2 cut(s)	1323, 1340
Bse8I	GATNNNNATC	1 cut(s)	2091
BseBI	CCWGG	2 cut(s)	1491, 1737
BseCI	ATCGAT	1 cut(s)	2089
BseDI	CCNNGG	5 cut(s)	414, 432, 456, 693, 1630
BseGI	GGATG	9 cut(s)	31, 490, 583, 873, 927, 1342, 1444, 1798, 1837
BseJI	GATNNNNATC	1 cut(s)	2091
BseLI	CCNNNNNNNGG	2 cut(s)	438, 634
BseMI	GCAATG	2 cut(s)	1323, 1340
BseMII	CTCAG	4 cut(s)	621, 629, 2049, 2072
BseNI	ACTGG	4 cut(s)	20, 186, 323, 2144
BseSI	GKGCMC	1 cut(s)	377
BseXI	GCAGC	7 cut(s)	190, 193, 943, 967, 1121, 1294, 1540
BseYI	CCCAGC	1 cut(s)	475
Bsh1236I	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
BshFI	GGCC	4 cut(s)	410, 679, 1024, 1925
BshNI	GGYRCC	1 cut(s)	14
BshVI	ATCGAT	1 cut(s)	2089
BsiHKAI	GWGCWC	2 cut(s)	423, 1120
BsiHKCI	CYCGRG	1 cut(s)	223
BsiSI	CCGG	2 cut(s)	424, 872
BsiWI	CGTACG	1 cut(s)	303
BslFI	GGGAC	2 cut(s)	8, 1056
BslI	CCNNNNNNNGG	2 cut(s)	438, 634
BsmAI	GTCTC	2 cut(s)	1272, 2019
BsmBI	CGTCTC	1 cut(s)	1272
BsmFI	GGGAC	2 cut(s)	8, 1056
BsnI	GGCC	4 cut(s)	410, 679, 1024, 1925
BsoBI	CYCGRG	1 cut(s)	223
Bsp1286I	GDGCHC	4 cut(s)	377, 423, 1120, 1609
Bsp143I	GATC	3 cut(s)	1135, 1681, 2086
Bsp1720I	GCTNAGC	1 cut(s)	2043
Bsp19I	CCATGG	3 cut(s)	456, 693, 1630
BspACI	CCGC	9 cut(s)	183, 411, 528, 665, 728, 831, 848, 1143, 1230
BspANI	GGCC	4 cut(s)	410, 679, 1024, 1925
BspCNI	CTCAG	4 cut(s)	622, 628, 2048, 2073
BspDI	ATCGAT	1 cut(s)	2089
BspFNI	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
BspHI	TCATGA	1 cut(s)	1771
BspLI	GGNNCC	5 cut(s)	16, 1071, 1072, 1683, 1699
BspMAI	CTGCAG	2 cut(s)	351, 1558
BspPI	GGATC	2 cut(s)	1676, 1689
BspT107I	GGYRCC	1 cut(s)	14
BsrDI	GCAATG	2 cut(s)	1323, 1340
BsrI	ACTGG	4 cut(s)	20, 186, 323, 2144
BssECI	CCNNGG	5 cut(s)	414, 432, 456, 693, 1630
BssMI	GATC	3 cut(s)	1135, 1681, 2086
BssT1I	CCWWGG	4 cut(s)	432, 456, 693, 1630
Bst2UI	CCWGG	2 cut(s)	1491, 1737
Bst4CI	ACNGT	2 cut(s)	55, 1763
Bst6I	CTCTTC	3 cut(s)	220, 777, 1899
BstAPI	GCANNNNNTGC	1 cut(s)	1115
BstBAI	YACGTR	1 cut(s)	1162
BstC8I	GCNNGC	4 cut(s)	241, 715, 1022, 1510
BstDEI	CTNAG	6 cut(s)	615, 630, 1371, 2035, 2043, 2081
BstDSI	CCRYGG	3 cut(s)	456, 693, 1630
BstF5I	GGATG	9 cut(s)	31, 490, 583, 873, 927, 1342, 1444, 1798, 1837
BstFNI	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
BstH2I	RGCGCY	1 cut(s)	1299
BstHHI	GCGC	7 cut(s)	211, 302, 547, 719, 1298, 1415, 1629
BstKTI	GATC	3 cut(s)	1138, 1684, 2089
BstMAI	GTCTC	2 cut(s)	1272, 2019
BstMBI	GATC	3 cut(s)	1135, 1681, 2086
BstMWI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1304, 1313, 1419, 1655
BstNI	CCWGG	2 cut(s)	1491, 1737
BstNSI	RCATGY	4 cut(s)	1157, 1219, 1419, 1623
BstSCI	CCNGG	3 cut(s)	423, 1489, 1735
BstSFI	CTRYAG	2 cut(s)	347, 1554
BstSLI	GKGCMC	1 cut(s)	377
BstSNI	TACGTA	1 cut(s)	1162
BstUI	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
BstV1I	GCAGC	7 cut(s)	190, 193, 943, 967, 1121, 1294, 1540
BstV2I	GAAGAC	2 cut(s)	569, 1036
BstX2I	RGATCY	1 cut(s)	1681
BstYI	RGATCY	1 cut(s)	1681
Bsu15I	ATCGAT	1 cut(s)	2089
Bsu36I	CCTNAGG	1 cut(s)	630
BsuI	GTATCC	1 cut(s)	1143
BsuRI	GGCC	4 cut(s)	410, 679, 1024, 1925
BsuTUI	ATCGAT	1 cut(s)	2089
BtgI	CCRYGG	3 cut(s)	456, 693, 1630
BtrI	CACGTC	1 cut(s)	29
BtsCI	GGATG	9 cut(s)	31, 490, 583, 873, 927, 1342, 1444, 1798, 1837
BtsIMutI	CAGTG	1 cut(s)	95
Cac8I	GCNNGC	4 cut(s)	241, 715, 1022, 1510
CciI	TCATGA	1 cut(s)	1771
CfoI	GCGC	7 cut(s)	211, 302, 547, 719, 1298, 1415, 1629
Cfr13I	GGNCC	2 cut(s)	1070, 1924
ClaI	ATCGAT	1 cut(s)	2089
CseI	GACGC	1 cut(s)	297
CsiI	ACCWGGT	1 cut(s)	1735
Csp6I	GTAC	3 cut(s)	304, 1101, 1623
CviQI	GTAC	3 cut(s)	304, 1101, 1623
DdeI	CTNAG	6 cut(s)	615, 630, 1371, 2035, 2043, 2081
DpnI	GATC	3 cut(s)	1137, 1683, 2088
DpnII	GATC	3 cut(s)	1135, 1681, 2086
DriI	GACNNNNNGTC	1 cut(s)	886
Eam1104I	CTCTTC	3 cut(s)	220, 777, 1899
Eam1105I	GACNNNNNGTC	1 cut(s)	886
EarI	CTCTTC	3 cut(s)	220, 777, 1899
EciI	GGCGGA	3 cut(s)	172, 680, 743
Ecl136II	GAGCTC	1 cut(s)	421
Eco105I	TACGTA	1 cut(s)	1162
Eco130I	CCWWGG	4 cut(s)	432, 456, 693, 1630
Eco24I	GRGCYC	2 cut(s)	423, 1609
Eco32I	GATATC	2 cut(s)	1816, 2093
Eco47I	GGWCC	1 cut(s)	1070
Eco53kI	GAGCTC	1 cut(s)	421
Eco81I	CCTNAGG	1 cut(s)	630
Eco88I	CYCGRG	1 cut(s)	223
EcoICRI	GAGCTC	1 cut(s)	421
EcoO109I	RGGNCCY	2 cut(s)	1070, 1924
EcoRI	GAATTC	1 cut(s)	592
EcoRII	CCWGG	2 cut(s)	1489, 1735
EcoRV	GATATC	2 cut(s)	1816, 2093
EcoT14I	CCWWGG	4 cut(s)	432, 456, 693, 1630
EcoT22I	ATGCAT	2 cut(s)	1323, 1342
EcoT38I	GRGCYC	2 cut(s)	423, 1609
ErhI	CCWWGG	4 cut(s)	432, 456, 693, 1630
Esp3I	CGTCTC	1 cut(s)	1272
FaqI	GGGAC	2 cut(s)	8, 1056
FauI	CCCGC	2 cut(s)	521, 824
Fnu4HI	GCNGC	9 cut(s)	204, 207, 411, 957, 981, 1110, 1144, 1308, 1554
FokI	GGATG	9 cut(s)	18, 497, 590, 880, 934, 1349, 1451, 1785, 1844
FriOI	GRGCYC	2 cut(s)	423, 1609
Fsp4HI	GCNGC	9 cut(s)	204, 207, 411, 957, 981, 1110, 1144, 1308, 1554
FspAI	RTGCGCAY	1 cut(s)	1414
FspBI	CTAG	9 cut(s)	11, 812, 942, 966, 1094, 1238, 1364, 1781, 1949
FspI	TGCGCA	2 cut(s)	718, 1414
GlaI	GCGC	7 cut(s)	210, 301, 546, 718, 1297, 1414, 1628
GluI	GCNGC	9 cut(s)	204, 207, 411, 957, 981, 1110, 1144, 1308, 1554
GsaI	CCCAGC	1 cut(s)	479
GsuI	CTGGAG	1 cut(s)	1565
HaeII	RGCGCY	1 cut(s)	1299
HaeIII	GGCC	4 cut(s)	410, 679, 1024, 1925
HapII	CCGG	2 cut(s)	424, 872
HgaI	GACGC	1 cut(s)	297
HhaI	GCGC	7 cut(s)	211, 302, 547, 719, 1298, 1415, 1629
Hin6I	GCGC	7 cut(s)	209, 300, 545, 717, 1296, 1413, 1627
HinP1I	GCGC	7 cut(s)	209, 300, 545, 717, 1296, 1413, 1627
HincII	GTYRAC	1 cut(s)	1519
HindII	GTYRAC	1 cut(s)	1519
HindIII	AAGCTT	2 cut(s)	2045, 2057
HinfI	GANTC	3 cut(s)	88, 1715, 2008
HpaII	CCGG	2 cut(s)	424, 872
HphI	GGTGA	5 cut(s)	472, 682, 1184, 1387, 1799
Hpy166II	GTNNAC	5 cut(s)	279, 387, 894, 1159, 1519
Hpy188I	TCNGA	5 cut(s)	418, 484, 921, 1862, 2082
Hpy188III	TCNNGA	7 cut(s)	223, 263, 971, 1238, 1544, 1719, 1772
Hpy8I	GTNNAC	5 cut(s)	279, 387, 894, 1159, 1519
Hpy99I	CGWCG	2 cut(s)	257, 362
HpyAV	CCTTC	8 cut(s)	77, 229, 718, 858, 871, 1237, 1602, 1909
HpyCH4III	ACNGT	2 cut(s)	55, 1763
HpyCH4IV	ACGT	4 cut(s)	28, 882, 1161, 1281
HpyF10VI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1304, 1313, 1419, 1655
HpyF3I	CTNAG	6 cut(s)	615, 630, 1371, 2035, 2043, 2081
HpySE526I	ACGT	4 cut(s)	28, 882, 1161, 1281
HspAI	GCGC	7 cut(s)	209, 300, 545, 717, 1296, 1413, 1627
KflI	GGGWCCC	1 cut(s)	1070
Kzo9I	GATC	3 cut(s)	1135, 1681, 2086
LmnI	GCTCC	7 cut(s)	418, 426, 1127, 1293, 1468, 1697, 1979
Lsp1109I	GCAGC	7 cut(s)	190, 193, 943, 967, 1121, 1294, 1540
LweI	GCATC	4 cut(s)	342, 835, 858, 1327
MabI	ACCWGGT	1 cut(s)	1735
MaeI	CTAG	9 cut(s)	11, 812, 942, 966, 1094, 1238, 1364, 1781, 1949
MaeII	ACGT	4 cut(s)	28, 882, 1161, 1281
MaeIII	GTNAC	6 cut(s)	583, 688, 1087, 1190, 1390, 1878
MalI	GATC	3 cut(s)	1137, 1683, 2088
MboI	GATC	3 cut(s)	1135, 1681, 2086
MfeI	CAATTG	2 cut(s)	1121, 1749
MflI	RGATCY	1 cut(s)	1681
MhlI	GDGCHC	4 cut(s)	377, 423, 1120, 1609
MluI	ACGCGT	1 cut(s)	306
MmeI	TCCRAC	2 cut(s)	621, 1809
Mph1103I	ATGCAT	2 cut(s)	1323, 1342
MseI	TTAA	3 cut(s)	498, 651, 1260
MslI	CAYNNNNRTG	1 cut(s)	516
MspI	CCGG	2 cut(s)	424, 872
MspR9I	CCNGG	3 cut(s)	425, 1491, 1737
MunI	CAATTG	2 cut(s)	1121, 1749
MvaI	CCWGG	2 cut(s)	1491, 1737
MvnI	CGCG	6 cut(s)	300, 302, 308, 547, 1627, 1998
MwoI	GCNNNNNNNGC	6 cut(s)	725, 1115, 1304, 1313, 1419, 1655
NciI	CCSGG	1 cut(s)	425
NcoI	CCATGG	3 cut(s)	456, 693, 1630
NdeII	GATC	3 cut(s)	1135, 1681, 2086
NlaIV	GGNNCC	5 cut(s)	16, 1071, 1072, 1683, 1699
NmeAIII	GCCGAG	1 cut(s)	496
NmuCI	GTSAC	4 cut(s)	688, 1190, 1390, 1878
NsbI	TGCGCA	2 cut(s)	718, 1414
NsiI	ATGCAT	2 cut(s)	1323, 1342
NspI	RCATGY	4 cut(s)	1157, 1219, 1419, 1623
PaeR7I	CTCGAG	1 cut(s)	223
PagI	TCATGA	1 cut(s)	1771
PciI	ACATGT	2 cut(s)	1153, 1215
PfeI	GAWTC	3 cut(s)	88, 1715, 2008
Pfl23II	CGTACG	1 cut(s)	303
PkrI	GCNGC	9 cut(s)	205, 208, 412, 958, 982, 1111, 1145, 1309, 1555
Ppu21I	YACGTR	1 cut(s)	1162
PpuMI	RGGWCCY	1 cut(s)	1070
PscI	ACATGT	2 cut(s)	1153, 1215
PsiI	TTATAA	1 cut(s)	2064
Psp124BI	GAGCTC	1 cut(s)	423
Psp5II	RGGWCCY	1 cut(s)	1070
Psp6I	CCWGG	2 cut(s)	1489, 1735
PspFI	CCCAGC	1 cut(s)	475
PspGI	CCWGG	2 cut(s)	1489, 1735
PspLI	CGTACG	1 cut(s)	303
PspN4I	GGNNCC	5 cut(s)	16, 1071, 1072, 1683, 1699
PspPI	GGNCC	2 cut(s)	1070, 1924
PspPPI	RGGWCCY	1 cut(s)	1070
PstI	CTGCAG	2 cut(s)	351, 1558
PsuI	RGATCY	1 cut(s)	1681
RsaI	GTAC	3 cut(s)	305, 1102, 1624
RsaNI	GTAC	3 cut(s)	304, 1101, 1623
RseI	CAYNNNNRTG	1 cut(s)	516
SacI	GAGCTC	1 cut(s)	423
SaqAI	TTAA	3 cut(s)	498, 651, 1260
SatI	GCNGC	9 cut(s)	204, 207, 411, 957, 981, 1110, 1144, 1308, 1554
Sau3AI	GATC	3 cut(s)	1135, 1681, 2086
Sau96I	GGNCC	2 cut(s)	1070, 1924
ScaI	AGTACT	1 cut(s)	1102
ScrFI	CCNGG	3 cut(s)	425, 1491, 1737
SduI	GDGCHC	4 cut(s)	377, 423, 1120, 1609
SexAI	ACCWGGT	1 cut(s)	1735
SfaNI	GCATC	4 cut(s)	342, 835, 858, 1327
SfcI	CTRYAG	2 cut(s)	347, 1554
Sfr274I	CTCGAG	1 cut(s)	223
SinI	GGWCC	1 cut(s)	1070
SlaI	CTCGAG	1 cut(s)	223
SmiMI	CAYNNNNRTG	1 cut(s)	516
SmlI	CTYRAG	4 cut(s)	128, 223, 404, 1250
SmoI	CTYRAG	4 cut(s)	128, 223, 404, 1250
SnaBI	TACGTA	1 cut(s)	1162
SsiI	CCGC	9 cut(s)	183, 411, 528, 665, 728, 831, 848, 1143, 1230
SspI	AATATT	2 cut(s)	1452, 1639
SspMI	CTAG	9 cut(s)	11, 812, 942, 966, 1094, 1238, 1364, 1781, 1949
SstI	GAGCTC	1 cut(s)	423
StyD4I	CCNGG	3 cut(s)	423, 1489, 1735
StyI	CCWWGG	4 cut(s)	432, 456, 693, 1630
TaaI	ACNGT	2 cut(s)	55, 1763
TaiI	ACGT	4 cut(s)	31, 885, 1164, 1284
TaqI	TCGA	9 cut(s)	171, 224, 231, 252, 357, 1212, 1674, 2054, 2089
TatI	WGTACW	1 cut(s)	1100
TauI	GCSGC	2 cut(s)	413, 1146
TfiI	GAWTC	3 cut(s)	88, 1715, 2008
Tru1I	TTAA	3 cut(s)	498, 651, 1260
Tru9I	TTAA	3 cut(s)	498, 651, 1260
TscAI	CASTG	1 cut(s)	102
TseFI	GTSAC	4 cut(s)	688, 1190, 1390, 1878
TseI	GCWGC	7 cut(s)	203, 206, 956, 980, 1109, 1307, 1553
Tsp45I	GTSAC	4 cut(s)	688, 1190, 1390, 1878
TspRI	CASTG	1 cut(s)	102
VpaK11BI	GGWCC	1 cut(s)	1070
XapI	RAATTY	3 cut(s)	258, 592, 1775
XbaI	TCTAGA	1 cut(s)	1237
XceI	RCATGY	4 cut(s)	1157, 1219, 1419, 1623
XhoI	CTCGAG	1 cut(s)	223
XspI	CTAG	9 cut(s)	11, 812, 942, 966, 1094, 1238, 1364, 1781, 1949
ZrmI	AGTACT	1 cut(s)	1102
Zsp2I	ATGCAT	2 cut(s)	1323, 1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.