Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0005429

Physical Location & Seq

Genomic Coordinates Forward (+)

8311393 .. 8324461

Gene Structure 13069 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G114800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGGCTCCGATTCCGCCAGATAACGGCGTAGAAGGAGACGATGAGAGAGAGGAAGAGGGCGAAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGCCGAGGCTAAAGTACCAGCGAATGGGAGGCAGCATTCCTACGCTGTTGACGAGCGATGTGGCTACGTGTATCGCCGTCGCGGAACGAATGATCGCGCTCGGAACTCACGGGGGCACCGTTCATATTCTCGATTTTCTCGGGAATCAGGTTAAGGAATTCCCTGCTCATACTGCTGCAGTGAATGATCTTAGCTTTGACATAGAAGGTGAATATATAGGAAGCTGTTCAGACGATGGGTCTGTTGTAATAAACAGCCTTTTCACTGATGAGAAAATGAGGTTTGAGTATCATCGCCCAATGAAGGCTATTGCTTTGGATCCAGATTATGCAAAAAAATCTTCTAGGAGATTTGCAGCTGGTGGTTTAGCTGGTCATTTATATTATAATACAAAAAGATGGCTGGGCTTTAGAGATCAGGTTTTGCATTCTGGTGAAGGTCCTATACATGCAGTGAAGTGGAGAGCAAGTCTCATTGCTTGGGCTAATGATGCAGGTGTGAAAGTATACGATACTGCAAATGATCAGCGTATAACATTCATTGAAAGACCACGAGGAAGCCCACGACCTGAACTTTTGCTCCCTCACCTAGTTTGGCAGGACGACACATTGTTGGTCATTGGCTGGGGAACATCAATCAAAATAGCATCGATAAAAACAAATCAGTCTAGAGCAGCCAATGGGACAGTCAAGCATGTCTCAATGTCAATGTCTAATATGAACCAGGTGGATATTGTGGCATCCTTTCAGACCAGCTATTTCATTTCTGGGATTGCTCCTTTTGGTGACTCTTTGGTCGTTCTAGCCTATATCCCTGGTGAAGAAGACGGGGAGAAGGAATTTAGTAGCTCTGTTCCATCACGGCAGGGAAATGCACAGAGACCAGAAGTACGTATTGTAACATGGAATAATGATGAGCTTTCAACAGATGCTTTACCTGTACATGGCTTTGAGCATTACAAAGCAAAGGACTATTCCCTTGCTCACGCTCCTTTCTCAGGTAGCAGCTATGCTGGTGGTCAGTGGGCTGAAGGTGATGAACCACTGTACTATATTGTATCCCCAAAGGATGTAGTCATTGCAAAACCCAGGGATGCTGAAGATCATATTGCTTGGCTTCTTCAACATGGTTGGCATGAAAAAGCTTTGGCTGCTGTTGAAGCCGGCCAGGGACGGAGTGAACTTCTTGATGAGGTTGGTTCTAGATACCTTGATCATTTGATTGTGGAAAGAAAATATGCTGAAGCCGCATCTTTGTGTCCCAAATTGTTGAGAGGATCTGCTTCAGCATGGGAAAGATGGGTTTTCCACTTTGCGCATCTGCGTCAGCTTCCAGTATTAGTCCCATATATACCAACAGAAAACCCAAGACTGCGTGATACTGCTTATGAGGTTGCTCTAGTAGCGCTGGCTACAAATCCATCTTTTCATATGGAGCTCTTGTCAACTGTTAAATCTTGGCCACCGGTGATTTATTCTTCATTGCCTGTTATCTCAGCTATAGAACCTCAGCTGAATACATCGTCCATGACAGATGCTCTTAAGGAGGCTCTAGCAGAGTTGTACGTGATTGATGGGCAATATGAAAAAGCATTTTCACTATATGCTGATCTTTTGAAGCCAGACATATTTTCCTTCATCGAAAAGCACAATTTATATGATTCCATTCGGGAAAAGGTTGTCCAACTGATGATGCTAGATTGCAAGCAGGCAGTTCCTTTATTGATTCAAAACAAGGATTTAATTACTCCATCTGAAGTGGTCAAACAACTTTTGAATGCAAGTGACAAGTGTGATTCCAGATATTTCTTGCATGCATATTTGCATTCACTATTTGAAGCAAACCCTCATGCTGGAAAGGATTTTCATGATGTGCAGGTAGAGCTTTATGCAGACTACGATTCAAAGATGCTACTTCCTTTTCTTCGTAGTAGTCAACATTACAAACTTGAGAAGGCATATGAAATTTGTATCGGGAGAGGTCTTTTAAGGGAGCAAGTCTTCATTCTTGGAAGAATGGGAAATGCGAAACAAGCCCTTTCTGTAATCATAAATAATCTTGGGGATATTGAAGAGGCTGTGGAGTTTGTAAATATGCAACATGATGATGAACTTTGGGAAGAATTAATTCAGCAGTGTCTTCATAAACCTGAAATGGTAGGCGTGCTATTGGAGCACACAGTTGGAAATCTAGATCCTCTATATATAGTGAATATGGTTCCTAATGGGTTGGAGATTCCTAGGCTTAGGGATCGCCTAGTGAAAATCATCACCAATTACAGGACTGAAACATCTCTAAGACATGGATGCAATGATATCCTTAAGGCTGATATTGTCAACCTCTTGGTCAAATACTACAAAGAGGCAATACATGGAATTTACTTAAGCAATGAAGAAGACGAGGCACGGACGAAAAGGAATGATAGTAGGGCTTCTCAGGTGATTGAGAAATCACCAGGTGTGAGAAGTATGGAGGTTAAATCAAAACCTAGGGGTGGTGCAAGGTGTTGCATGTGTTTCGATCCCTTTTCTATACAAAGCCTTAATGTCATCGTTTTCTTTTGTTGTCATGCTTATCACATGACTTGTCTTATGGATTCCACCTATACTAATGGAATAAAAGGGAGTGGGGCCACTTCCAGTGAGAGTGTTGTGGAAGATGATGATGATGATACCCAATCGGGTGACTCTCGTATGCGTTGTATCTTATGTACTACTGCTGCTAGTCGACTTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006996 GO:0007033 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0019899 GO:0030897 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033263 GO:0033365 GO:0034613 GO:0035542 GO:0042144 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048284 GO:0050789 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097576 GO:0097708 GO:0098796 GO:0099023

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Clathrin

Protein Analysis

956

Amino Acids

107.31

Weight (kDa)

4.99

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005429)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08190
fragaria_vesca	FvH4_3g30370 FvH4_3g30370 FvH4_3g30370 FvH4_3g30370 FvH4_3g30370
malus_domestica	MD03G1129800.v1.1 MD11G1151700.v1.1
prunus_persica	Prupe.6G114800_v2.0.a1 Prupe.6G114800_v2.0.a1
pyrus_communis	pycom11g12380 pycom11g12390
rosa_chinensis	RchiOBHm_Chr5g0056311
rosa_laevigata	RLG00000035067 RLG00000035070 RLG00000035077 RLG00000035080 RLG00000035082
rosa_multiflora	Rmu_sc0000680.1_g000003
rosa_roxburghii	Rroxscaffold_1G00024010
rosa_rugosa	Rorug05G0298600 Rorug05G0298700 Rorug05G0298800
rosa_samantha	Rh5AG369600 Rh5BG380500 Rh5CG404000 Rh5DG393600
rosa_wichuraiana	Rw0G004390 Rw0G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	516
AarI	CACCTGC	1 cut(s)	614
AasI	GACNNNNNNGTC	1 cut(s)	923
Acc16I	TGCGCA	1 cut(s)	1446
Acc36I	ACCTGC	2 cut(s)	614, 1996
AccB1I	GGYRCC	1 cut(s)	245
AccB7I	CCANNNNNTGG	1 cut(s)	154
AccI	GTMKAC	2 cut(s)	636, 2857
AccII	CGCG	2 cut(s)	212, 227
AciI	CCGC	3 cut(s)	14, 212, 1377
AclWI	GGATC	6 cut(s)	443, 456, 1414, 2318, 2388, 2645
AcoI	YGGCCR	2 cut(s)	1294, 1589
AcsI	RAATTY	4 cut(s)	287, 968, 2094, 2505
AcuI	CTGAAG	5 cut(s)	1179, 1248, 1392, 1398, 1905
AdeI	CACNNNGTG	1 cut(s)	2588
AfaI	GTAC	6 cut(s)	146, 1020, 1071, 1178, 1694, 2842
AfeI	AGCGCT	1 cut(s)	1536
AfiI	CCNNNNNNNGG	8 cut(s)	23, 154, 433, 1073, 1127, 1982, 2409, 2624
AflII	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
AflIII	ACRYGT	1 cut(s)	197
AgeI	ACCGGT	1 cut(s)	1594
AhdI	GACNNNNNGTC	1 cut(s)	367
AjnI	CCWGG	5 cut(s)	852, 943, 1217, 1296, 2584
AloI	GAACNNNNNNTCC	2 cut(s)	693, 725
Alw21I	GWGCWC	2 cut(s)	1569, 2307
Alw26I	GTCTC	4 cut(s)	30, 605, 832, 1003
AlwI	GGATC	6 cut(s)	443, 456, 1414, 2318, 2388, 2645
Ama87I	CYCGRG	1 cut(s)	269
Aor51HI	AGCGCT	1 cut(s)	1536
AoxI	GGCC	3 cut(s)	1294, 1589, 2760
ApeKI	GCWGC	7 cut(s)	162, 305, 485, 803, 1134, 1280, 2849
ApoI	RAATTY	4 cut(s)	287, 968, 2094, 2505
AseI	ATTAAT	1 cut(s)	2255
AsiGI	ACCGGT	1 cut(s)	1594
Asp700I	GAANNNNTTC	2 cut(s)	355, 2256
AspA2I	CCTAGG	2 cut(s)	2369, 2618
AspLEI	GCGC	3 cut(s)	229, 1447, 1537
AspS9I	GGNCC	2 cut(s)	569, 2760
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	1 cut(s)	569
AvrII	CCTAGG	2 cut(s)	2369, 2618
BaeGI	GKGCMC	1 cut(s)	248
BalI	TGGCCA	1 cut(s)	1591
BamHI	GGATCC	1 cut(s)	448
BanI	GGYRCC	1 cut(s)	245
BanII	GRGCYC	1 cut(s)	1569
BarI	GAAGNNNNNNTAC	2 cut(s)	558, 590
BauI	CACGAG	1 cut(s)	681
BbsI	GAAGAC	4 cut(s)	960, 2122, 2261, 2532
Bbv12I	GWGCWC	2 cut(s)	1569, 2307
BbvCI	CCTCAGC	1 cut(s)	1638
BbvI	GCAGC	7 cut(s)	174, 292, 497, 815, 1146, 1267, 2836
BccI	CCATC	7 cut(s)	359, 522, 994, 1422, 1558, 1697, 1888
BceAI	ACGGC	3 cut(s)	40, 191, 1007
BcgI	CGANNNNNNTGC	2 cut(s)	2629, 2663
BciT130I	CCWGG	5 cut(s)	854, 945, 1219, 1298, 2586
BciVI	GTATCC	1 cut(s)	1198
BclI	TGATCA	2 cut(s)	652, 1342
BcoDI	GTCTC	4 cut(s)	30, 605, 832, 1003
BfmI	CTRYAG	2 cut(s)	306, 1629
BfoI	RGCGCY	1 cut(s)	1538
BfrI	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
BfuAI	ACCTGC	2 cut(s)	614, 1996
BfuI	GTATCC	1 cut(s)	1198
BisI	GCNGC	8 cut(s)	163, 306, 486, 804, 1135, 1281, 1377, 2850
BlnI	CCTAGG	2 cut(s)	2369, 2618
BlsI	GCNGC	8 cut(s)	164, 307, 487, 805, 1136, 1282, 1378, 2851
Bme1390I	CCNGG	5 cut(s)	854, 945, 1219, 1298, 2586
Bme18I	GGWCC	1 cut(s)	569
BmeRI	GACNNNNNGTC	1 cut(s)	367
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	2 cut(s)	569, 2760
BmiI	GGNNCC	6 cut(s)	6, 132, 247, 450, 2349, 2761
BmrFI	CCNGG	5 cut(s)	854, 945, 1219, 1298, 2586
BpiI	GAAGAC	4 cut(s)	960, 2122, 2261, 2532
BplI	GAGNNNNNCTC	2 cut(s)	585, 617
Bpu10I	CCTNAGC	2 cut(s)	1638, 2375
BpuEI	CTTGAG	1 cut(s)	2099
Bsa29I	ATCGAT	1 cut(s)	779
BsaAI	YACGTR	3 cut(s)	198, 1022, 1696
BsaI	GGTCTC	1 cut(s)	1003
BsaJI	CCNNGG	7 cut(s)	134, 943, 1217, 1218, 1297, 2369, 2618
BsaWI	WCCGGW	1 cut(s)	1594
BsaXI	ACNNNNNCTCC	6 cut(s)	583, 613, 693, 723, 1556, 1586
Bsc4I	CCNNNNNNNGG	8 cut(s)	23, 154, 433, 1073, 1127, 1982, 2409, 2624
Bse118I	RCCGGY	2 cut(s)	1292, 1594
Bse1I	ACTGG	2 cut(s)	1463, 2769
Bse3DI	GCAATG	5 cut(s)	603, 1206, 1610, 2446, 2524
BseBI	CCWGG	5 cut(s)	854, 945, 1219, 1298, 2586
BseCI	ATCGAT	1 cut(s)	779
BseDI	CCNNGG	7 cut(s)	134, 943, 1217, 1218, 1297, 2369, 2618
BseGI	GGATG	4 cut(s)	869, 1204, 1228, 2441
BseLI	CCNNNNNNNGG	8 cut(s)	23, 154, 433, 1073, 1127, 1982, 2409, 2624
BseMI	GCAATG	5 cut(s)	603, 1206, 1610, 2446, 2524
BseMII	CTCAG	4 cut(s)	1140, 1638, 1652, 2579
BseNI	ACTGG	2 cut(s)	1463, 2769
BseRI	GAGGAG	5 cut(s)	131, 134, 137, 140, 143
BseSI	GKGCMC	1 cut(s)	248
BseXI	GCAGC	7 cut(s)	174, 292, 497, 815, 1146, 1267, 2836
BseYI	CCCAGC	2 cut(s)	532, 753
BsgI	GTGCAG	1 cut(s)	2024
Bsh1236I	CGCG	2 cut(s)	212, 227
BshFI	GGCC	3 cut(s)	1296, 1591, 2762
BshNI	GGYRCC	1 cut(s)	245
BshTI	ACCGGT	1 cut(s)	1594
BshVI	ATCGAT	1 cut(s)	779
BsiHKAI	GWGCWC	2 cut(s)	1569, 2307
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	2 cut(s)	1293, 1595
BslFI	GGGAC	4 cut(s)	826, 1314, 1374, 1457
BslI	CCNNNNNNNGG	8 cut(s)	23, 154, 433, 1073, 1127, 1982, 2409, 2624
BsmAI	GTCTC	4 cut(s)	30, 605, 832, 1003
BsmBI	CGTCTC	1 cut(s)	30
BsmFI	GGGAC	4 cut(s)	826, 1314, 1374, 1457
BsmI	GAATGC	4 cut(s)	165, 556, 1912, 1954
BsnI	GGCC	3 cut(s)	1296, 1591, 2762
Bso31I	GGTCTC	1 cut(s)	1003
BsoBI	CYCGRG	1 cut(s)	269
Bsp1286I	GDGCHC	3 cut(s)	248, 1569, 2307
Bsp1407I	TGTACA	1 cut(s)	1069
BspACI	CCGC	3 cut(s)	14, 212, 1377
BspANI	GGCC	3 cut(s)	1296, 1591, 2762
BspCNI	CTCAG	4 cut(s)	1139, 1637, 1651, 2578
BspDI	ATCGAT	1 cut(s)	779
BspFNI	CGCG	2 cut(s)	212, 227
BspHI	TCATGA	1 cut(s)	1996
BspLI	GGNNCC	6 cut(s)	6, 132, 247, 450, 2349, 2761
BspMAI	CTGCAG	1 cut(s)	310
BspMI	ACCTGC	2 cut(s)	614, 1996
BspPI	GGATC	6 cut(s)	443, 456, 1414, 2318, 2388, 2645
BspT107I	GGYRCC	1 cut(s)	245
BspTI	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
BspTNI	GGTCTC	1 cut(s)	1003
BsrDI	GCAATG	5 cut(s)	603, 1206, 1610, 2446, 2524
BsrFI	RCCGGY	2 cut(s)	1292, 1594
BsrGI	TGTACA	1 cut(s)	1069
BsrI	ACTGG	2 cut(s)	1463, 2769
BssAI	RCCGGY	2 cut(s)	1292, 1594
BssECI	CCNNGG	7 cut(s)	134, 943, 1217, 1218, 1297, 2369, 2618
BssNAI	GTATAC	1 cut(s)	637
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	2 cut(s)	2369, 2618
Bst1107I	GTATAC	1 cut(s)	637
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	5 cut(s)	854, 945, 1219, 1298, 2586
Bst4CI	ACNGT	5 cut(s)	250, 817, 1176, 1579, 2311
Bst6I	CTCTTC	7 cut(s)	48, 66, 87, 96, 102, 108, 2196
BstAFI	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
BstAUI	TGTACA	1 cut(s)	1069
BstBAI	YACGTR	3 cut(s)	198, 1022, 1696
BstC8I	GCNNGC	6 cut(s)	1294, 1539, 1835, 1839, 1944, 2294
BstDEI	CTNAG	7 cut(s)	320, 1126, 1624, 1638, 2375, 2426, 2565
BstENI	CCTNNNNNAGG	1 cut(s)	1125
BstF5I	GGATG	4 cut(s)	869, 1204, 1228, 2441
BstFNI	CGCG	2 cut(s)	212, 227
BstH2I	RGCGCY	1 cut(s)	1538
BstHHI	GCGC	3 cut(s)	229, 1447, 1537
BstMAI	GTCTC	4 cut(s)	30, 605, 832, 1003
BstMWI	GCNNNNNNNGC	9 cut(s)	302, 620, 1280, 1289, 1376, 1532, 2011, 2162, 2302
BstNI	CCWGG	5 cut(s)	854, 945, 1219, 1298, 2586
BstNSI	RCATGY	4 cut(s)	581, 827, 1946, 2644
BstSCI	CCNGG	5 cut(s)	852, 943, 1217, 1296, 2584
BstSFI	CTRYAG	2 cut(s)	306, 1629
BstSLI	GKGCMC	1 cut(s)	248
BstSNI	TACGTA	1 cut(s)	1022
BstUI	CGCG	2 cut(s)	212, 227
BstV1I	GCAGC	7 cut(s)	174, 292, 497, 815, 1146, 1267, 2836
BstV2I	GAAGAC	4 cut(s)	960, 2122, 2261, 2532
BstX2I	RGATCY	3 cut(s)	448, 1406, 2323
BstYI	RGATCY	3 cut(s)	448, 1406, 2323
BstZ17I	GTATAC	1 cut(s)	637
Bsu15I	ATCGAT	1 cut(s)	779
BsuI	GTATCC	1 cut(s)	1198
BsuRI	GGCC	3 cut(s)	1296, 1591, 2762
BsuTUI	ATCGAT	1 cut(s)	779
BtgZI	GCGATG	2 cut(s)	201, 407
BtsCI	GGATG	4 cut(s)	869, 1204, 1228, 2441
BtsI	GCAGTG	3 cut(s)	315, 588, 2270
BtsIMutI	CAGTG	7 cut(s)	315, 393, 588, 1157, 1172, 2270, 2776
BveI	ACCTGC	2 cut(s)	614, 1996
Cac8I	GCNNGC	6 cut(s)	1294, 1539, 1835, 1839, 1944, 2294
CciI	TCATGA	1 cut(s)	1996
CfoI	GCGC	3 cut(s)	229, 1447, 1537
Cfr10I	RCCGGY	2 cut(s)	1292, 1594
Cfr13I	GGNCC	2 cut(s)	569, 2760
ClaI	ATCGAT	1 cut(s)	779
CseI	GACGC	1 cut(s)	1442
CsiI	ACCWGGT	2 cut(s)	852, 2584
Csp6I	GTAC	6 cut(s)	145, 1019, 1070, 1177, 1693, 2841
CspAI	ACCGGT	1 cut(s)	1594
CviQI	GTAC	6 cut(s)	145, 1019, 1070, 1177, 1693, 2841
DdeI	CTNAG	7 cut(s)	320, 1126, 1624, 1638, 2375, 2426, 2565
DraIII	CACNNNGTG	1 cut(s)	2588
DrdI	GACNNNNNNGTC	1 cut(s)	923
DriI	GACNNNNNGTC	1 cut(s)	367
DseDI	GACNNNNNNGTC	1 cut(s)	923
EaeI	YGGCCR	2 cut(s)	1294, 1589
Eam1104I	CTCTTC	7 cut(s)	48, 66, 87, 96, 102, 108, 2196
Eam1105I	GACNNNNNGTC	1 cut(s)	367
EarI	CTCTTC	7 cut(s)	48, 66, 87, 96, 102, 108, 2196
Ecl136II	GAGCTC	1 cut(s)	1567
Eco105I	TACGTA	1 cut(s)	1022
Eco130I	CCWWGG	2 cut(s)	2369, 2618
Eco24I	GRGCYC	1 cut(s)	1569
Eco31I	GGTCTC	1 cut(s)	1003
Eco32I	GATATC	1 cut(s)	2446
Eco47I	GGWCC	1 cut(s)	569
Eco47III	AGCGCT	1 cut(s)	1536
Eco53kI	GAGCTC	1 cut(s)	1567
Eco57I	CTGAAG	5 cut(s)	1179, 1248, 1392, 1398, 1905
Eco88I	CYCGRG	1 cut(s)	269
EcoICRI	GAGCTC	1 cut(s)	1567
EcoNI	CCTNNNNNAGG	1 cut(s)	1125
EcoO109I	RGGNCCY	1 cut(s)	569
EcoRI	GAATTC	1 cut(s)	287
EcoRII	CCWGG	5 cut(s)	852, 943, 1217, 1296, 2584
EcoRV	GATATC	1 cut(s)	2446
EcoT14I	CCWWGG	2 cut(s)	2369, 2618
EcoT22I	ATGCAT	1 cut(s)	1948
EcoT38I	GRGCYC	1 cut(s)	1569
ErhI	CCWWGG	2 cut(s)	2369, 2618
Esp3I	CGTCTC	1 cut(s)	30
FaqI	GGGAC	4 cut(s)	826, 1314, 1374, 1457
FauNDI	CATATG	2 cut(s)	1560, 2089
FbaI	TGATCA	2 cut(s)	652, 1342
FblI	GTMKAC	2 cut(s)	636, 2857
Fnu4HI	GCNGC	8 cut(s)	163, 306, 486, 804, 1135, 1281, 1377, 2850
FokI	GGATG	4 cut(s)	856, 1211, 1235, 2448
FriOI	GRGCYC	1 cut(s)	1569
Fsp4HI	GCNGC	8 cut(s)	163, 306, 486, 804, 1135, 1281, 1377, 2850
FspI	TGCGCA	1 cut(s)	1446
GlaI	GCGC	3 cut(s)	228, 1446, 1536
GluI	GCNGC	8 cut(s)	163, 306, 486, 804, 1135, 1281, 1377, 2850
GsaI	CCCAGC	2 cut(s)	536, 757
HaeII	RGCGCY	1 cut(s)	1538
HaeIII	GGCC	3 cut(s)	1296, 1591, 2762
HapII	CCGG	2 cut(s)	1293, 1595
HgaI	GACGC	1 cut(s)	1442
HhaI	GCGC	3 cut(s)	229, 1447, 1537
Hin6I	GCGC	3 cut(s)	227, 1445, 1535
HinP1I	GCGC	3 cut(s)	227, 1445, 1535
HincII	GTYRAC	5 cut(s)	180, 1575, 2066, 2467, 2858
HindII	GTYRAC	5 cut(s)	180, 1575, 2066, 2467, 2858
HindIII	AAGCTT	1 cut(s)	1272
HpaII	CCGG	2 cut(s)	1293, 1595
Hpy166II	GTNNAC	7 cut(s)	180, 637, 1310, 1575, 2066, 2467, 2858
Hpy188I	TCNGA	5 cut(s)	9, 233, 361, 879, 1885
Hpy8I	GTNNAC	7 cut(s)	180, 637, 1310, 1575, 2066, 2467, 2858
Hpy99I	CGWCG	1 cut(s)	212
HpyAV	CCTTC	8 cut(s)	26, 329, 427, 560, 958, 1154, 1774, 2077
HpyCH4III	ACNGT	5 cut(s)	250, 817, 1176, 1579, 2311
HpyCH4IV	ACGT	3 cut(s)	197, 1021, 1695
HpyF10VI	GCNNNNNNNGC	9 cut(s)	302, 620, 1280, 1289, 1376, 1532, 2011, 2162, 2302
HpyF3I	CTNAG	7 cut(s)	320, 1126, 1624, 1638, 2375, 2426, 2565
HpySE526I	ACGT	3 cut(s)	197, 1021, 1695
HspAI	GCGC	3 cut(s)	227, 1445, 1535
KroI	GCCGGC	1 cut(s)	1292
KroNI	GCCGGC	1 cut(s)	1294
Ksp22I	TGATCA	2 cut(s)	652, 1342
LmnI	GCTCC	8 cut(s)	10, 130, 714, 910, 1123, 1564, 2122, 2302
Lsp1109I	GCAGC	7 cut(s)	174, 292, 497, 815, 1146, 1267, 2836
MabI	ACCWGGT	2 cut(s)	852, 2584
MaeII	ACGT	3 cut(s)	197, 1021, 1695
MaeIII	GTNAC	4 cut(s)	914, 1027, 1913, 2813
MflI	RGATCY	3 cut(s)	448, 1406, 2323
MhlI	GDGCHC	3 cut(s)	248, 1569, 2307
MlsI	TGGCCA	1 cut(s)	1591
MluNI	TGGCCA	1 cut(s)	1591
MlyI	GAGTC	2 cut(s)	911, 2810
MmeI	TCCRAC	3 cut(s)	1837, 2293, 2340
Mox20I	TGGCCA	1 cut(s)	1591
Mph1103I	ATGCAT	1 cut(s)	1948
MroNI	GCCGGC	1 cut(s)	1292
MroXI	GAANNNNTTC	2 cut(s)	355, 2256
MscI	TGGCCA	1 cut(s)	1591
MslI	CAYNNNNRTG	3 cut(s)	561, 1384, 2235
Msp20I	TGGCCA	1 cut(s)	1591
MspA1I	CMGCKG	2 cut(s)	488, 1642
MspCI	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
MspI	CCGG	2 cut(s)	1293, 1595
MspR9I	CCNGG	5 cut(s)	854, 945, 1219, 1298, 2586
Mva1269I	GAATGC	4 cut(s)	165, 556, 1912, 1954
MvaI	CCWGG	5 cut(s)	854, 945, 1219, 1298, 2586
MvnI	CGCG	2 cut(s)	212, 227
MwoI	GCNNNNNNNGC	9 cut(s)	302, 620, 1280, 1289, 1376, 1532, 2011, 2162, 2302
NaeI	GCCGGC	1 cut(s)	1294
NdeI	CATATG	2 cut(s)	1560, 2089
NgoMIV	GCCGGC	1 cut(s)	1292
NlaIV	GGNNCC	6 cut(s)	6, 132, 247, 450, 2349, 2761
NmeAIII	GCCGAG	1 cut(s)	159
NmuCI	GTSAC	3 cut(s)	914, 1913, 2813
NsbI	TGCGCA	1 cut(s)	1446
NsiI	ATGCAT	1 cut(s)	1948
NspI	RCATGY	4 cut(s)	581, 827, 1946, 2644
PaeI	GCATGC	1 cut(s)	1946
PagI	TCATGA	1 cut(s)	1996
PaqCI	CACCTGC	1 cut(s)	614
PasI	CCCWGGG	1 cut(s)	1218
PcsI	WCGNNNNNNNCGW	2 cut(s)	179, 246
PctI	GAATGC	4 cut(s)	165, 556, 1912, 1954
PdiI	GCCGGC	1 cut(s)	1294
PdmI	GAANNNNTTC	2 cut(s)	355, 2256
PfeI	GAWTC	8 cut(s)	10, 274, 1790, 1855, 1925, 2030, 2365, 2726
PflMI	CCANNNNNTGG	1 cut(s)	154
PinAI	ACCGGT	1 cut(s)	1594
PkrI	GCNGC	8 cut(s)	164, 307, 487, 805, 1136, 1282, 1378, 2851
PleI	GAGTC	2 cut(s)	911, 2810
PpsI	GAGTC	2 cut(s)	911, 2810
Ppu21I	YACGTR	3 cut(s)	198, 1022, 1696
PpuMI	RGGWCCY	1 cut(s)	569
PshBI	ATTAAT	1 cut(s)	2255
PsiI	TTATAA	1 cut(s)	516
Psp124BI	GAGCTC	1 cut(s)	1569
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	5 cut(s)	852, 943, 1217, 1296, 2584
PspFI	CCCAGC	2 cut(s)	532, 753
PspGI	CCWGG	5 cut(s)	852, 943, 1217, 1296, 2584
PspN4I	GGNNCC	6 cut(s)	6, 132, 247, 450, 2349, 2761
PspPI	GGNCC	2 cut(s)	569, 2760
PspPPI	RGGWCCY	1 cut(s)	569
PstI	CTGCAG	1 cut(s)	310
PsuI	RGATCY	3 cut(s)	448, 1406, 2323
PvuII	CAGCTG	2 cut(s)	488, 1642
RsaI	GTAC	6 cut(s)	146, 1020, 1071, 1178, 1694, 2842
RsaNI	GTAC	6 cut(s)	145, 1019, 1070, 1177, 1693, 2841
RseI	CAYNNNNRTG	3 cut(s)	561, 1384, 2235
SacI	GAGCTC	1 cut(s)	1569
SalI	GTCGAC	1 cut(s)	2856
SatI	GCNGC	8 cut(s)	163, 306, 486, 804, 1135, 1281, 1377, 2850
Sau96I	GGNCC	2 cut(s)	569, 2760
SchI	GAGTC	2 cut(s)	911, 2810
ScrFI	CCNGG	5 cut(s)	854, 945, 1219, 1298, 2586
SduI	GDGCHC	3 cut(s)	248, 1569, 2307
SexAI	ACCWGGT	2 cut(s)	852, 2584
SfcI	CTRYAG	2 cut(s)	306, 1629
SgrAI	CRCCGGYG	1 cut(s)	1594
SinI	GGWCC	1 cut(s)	569
SmiMI	CAYNNNNRTG	3 cut(s)	561, 1384, 2235
SmlI	CTYRAG	5 cut(s)	1670, 2078, 2450, 2512, 2861
SmoI	CTYRAG	5 cut(s)	1670, 2078, 2450, 2512, 2861
SnaBI	TACGTA	1 cut(s)	1022
SphI	GCATGC	1 cut(s)	1946
SsiI	CCGC	3 cut(s)	14, 212, 1377
SstI	GAGCTC	1 cut(s)	1569
StyD4I	CCNGG	5 cut(s)	852, 943, 1217, 1296, 2584
StyI	CCWWGG	2 cut(s)	2369, 2618
TaaI	ACNGT	5 cut(s)	250, 817, 1176, 1579, 2311
TaiI	ACGT	3 cut(s)	200, 1024, 1698
TaqI	TCGA	5 cut(s)	261, 779, 1770, 2649, 2857
TatI	WGTACW	3 cut(s)	1069, 1176, 2840
TauI	GCSGC	1 cut(s)	1379
TfiI	GAWTC	8 cut(s)	10, 274, 1790, 1855, 1925, 2030, 2365, 2726
TscAI	CASTG	7 cut(s)	315, 400, 588, 1157, 1179, 2270, 2776
TseFI	GTSAC	3 cut(s)	914, 1913, 2813
TseI	GCWGC	7 cut(s)	162, 305, 485, 803, 1134, 1280, 2849
Tsp45I	GTSAC	3 cut(s)	914, 1913, 2813
TspGWI	ACGGA	2 cut(s)	1318, 2551
TspRI	CASTG	7 cut(s)	315, 400, 588, 1157, 1179, 2270, 2776
Van91I	CCANNNNNTGG	1 cut(s)	154
Vha464I	CTTAAG	4 cut(s)	1670, 2450, 2512, 2861
VpaK11BI	GGWCC	1 cut(s)	569
VspI	ATTAAT	1 cut(s)	2255
XagI	CCTNNNNNAGG	1 cut(s)	1125
XapI	RAATTY	4 cut(s)	287, 968, 2094, 2505
XbaI	TCTAGA	3 cut(s)	797, 1331, 2320
XceI	RCATGY	4 cut(s)	581, 827, 1946, 2644
XmaJI	CCTAGG	2 cut(s)	2369, 2618
XmiI	GTMKAC	2 cut(s)	636, 2857
XmnI	GAANNNNTTC	2 cut(s)	355, 2256
Zsp2I	ATGCAT	1 cut(s)	1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.