Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005429

Physical Location & Seq

Genomic Coordinates Forward (+)

11296931 .. 11304928

Gene Structure 7998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g12380.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGACAATGGCCCCGATTCCGCCCGATAACGGCGTCGAAGGCGACGACGAGAGAGAGGAAGAGGGCGAGGAGGAAGAAGAAGAGGAAGAGGAGGAAGAAGAAGAAGAAGAGGAAGAGGAGCCGAGGCTCAAGTACCAGCGAATGGGAGGCAGCATTCCCACACTGTTAACGAGCGATGTGGCGTCGTGCATAGCCGTCGCAGAACGAATGATCGCGCTCGGGACTCACGGCGGCACCGTTCATATTCTCGATTTTCTCGGGAATCAGGTTAAGGAATTCCCTGCTCATACTGCTGCAGTGAATGATCTTAGCTTCGATGTAGAAGGTGAATTTATAGGAAGCTGTTCAGATGATGGGTCTGTTGTAATAAGCAGTCTTTTCACTGATGAGAAAATGAGGTTTGAGTATCATCGCCCAATGAAGGCTATTGCCCTGGATCCAGATTATGCAAAAAAATCATCTAGAAGATTTGTAGCTGGTGGTTTAGCTGGTCATTTGTATTTTAATACAAAAAGATGGCTGGGCTTTAAAGATCAGGTTTTGCACTCTGGTGAAGGTCCTATACATGCAGTGAAGTGGAGAACGAGTCTCATTGCTTGGGCTAATGATGCAGGCGTGAAAGTGTACGATACTGCAAATGATCAATGTATAACATTCATTGAAAGGCCACGAGGAAGCCCACGTCCTGAGCTTTTGCTTCCTCACTTATTTTGGCAGGATGACTCATTGTTGGTCATTGGCTGGGGAACATCAATCAAAATCACATCGATAAAAACAAATCAGTCTGGAGCCACCAATGGGACATATAATCATGTCCCATTGTCTGGTATGAACCAAGTGGATATTGTGGCATCCTTTCAGACCAGCTATTTCATTTCTGGGATTGCCCCTTTTGGTGACACTTTGGTCGTTCTAGCCTATATCCCTGGTGAAGAAGATGGGGAGAAGGAATTTAGTAGCTCTGCTCCATCACGACAGGGAAATGCAGAGAGACCAGAAGTACGTATTGTAACATGGAATAATGATGAACTTTCAACAGATGCCTTACCTGTACATGGCTTTGAGCATTACAAGGCAAAGGACTATTCCCTTGCTCACGCACCTTTCTCAGGTAGCAGCTATGCTGGTGGCCAGTGGGCCGAAGGTGATGAACCACTGTACTATATTGTTTCCCCAAAGGATGTAGTCATTGCAAAACCGAGAGATGCGGAAGATCATATTGCGTGGCTTCTTCAACATGGTTGGCATGAAAAAGCTTTGGCTGCAGTTGAAGCGGGCCAGGGACGGAGTGAACTTCTTGATGAGGTTGGTTCTAGATACCTTGATCATTTGATTGTGGAAAGAAAATATGCTGAAGCCGCATCTTTATGCCCTAAATTATTGCGAGGATCTGCTTCAGCATGGGAAAGATGGGTTTTCCACTTTGCTCATTTGCGTCAGCTTCCTGTGTTAGTCCCATATATTCCGACAGAAAACCCAAGACTGCGTGATACTGCTTATGAGGTTGCTCTTGTAGCTCTCGCTACAAATCCATCTTTTCATAAGGAGCTTGTGTCAACTGTTAAATCTTGGCCACCTGTGATCTACTCTTCACTGCCTGTTATCTCAGCTATAGAACCTCAGCTTAATACATCGTCCATGACAGATGCCCTTAAGGAGGCACTAGCAGTGTTGTATGAGATTGATGGGCAATATGAGAAAGCATTCGCACTATATGCTGATCTTTTGAAGCCAGACATTTTTTCCTTCATTGAAAAGCACAATCTGTATGATTCGATTCGGGAAAAGGTTGTCCAATTAATGATGCTAGATTGCAAGCTTGCAGTTCCTTTGTTGATCCAAAACAAGGATTTAATAACTCCATCTGAAGTTGTCAACCAACTTTTGAATGCAAGTGATAAGTGTGATTCCAGATATTTCTTGCATGCATACTTGCATTCACTATTTGAAGCAGACTCTCATTCTGGAAAAGAATTTCACGATATGCAGGTAGAGCTTTATGCAGAATATGATCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006996 GO:0007033 GO:0007034 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0019899 GO:0030897 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033263 GO:0033365 GO:0034613 GO:0035542 GO:0042144 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043254 GO:0044087 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0048284 GO:0050789 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097576 GO:0097708 GO:0098796 GO:0099023

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Clathrin

Protein Analysis

673

Amino Acids

75.16

Weight (kDa)

4.82

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005429)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08190
fragaria_vesca	FvH4_3g30370 FvH4_3g30370 FvH4_3g30370 FvH4_3g30370 FvH4_3g30370
malus_domestica	MD03G1129800.v1.1 MD11G1151700.v1.1
prunus_persica	Prupe.6G114800_v2.0.a1 Prupe.6G114800_v2.0.a1
pyrus_communis	pycom11g12380 pycom11g12390
rosa_chinensis	RchiOBHm_Chr5g0056311
rosa_laevigata	RLG00000035067 RLG00000035070 RLG00000035077 RLG00000035080 RLG00000035082
rosa_multiflora	Rmu_sc0000680.1_g000003
rosa_roxburghii	Rroxscaffold_1G00024010
rosa_rugosa	Rorug05G0298600 Rorug05G0298700 Rorug05G0298800
rosa_samantha	Rh5AG369600 Rh5BG380500 Rh5CG404000 Rh5DG393600
rosa_wichuraiana	Rw0G004390 Rw0G012630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	905
Acc36I	ACCTGC	1 cut(s)	1978
AccB1I	GGYRCC	1 cut(s)	233
AccB7I	CCANNNNNTGG	2 cut(s)	142, 824
AccII	CGCG	1 cut(s)	215
AciI	CCGC	5 cut(s)	20, 231, 1208, 1274, 1359
AclWI	GGATC	4 cut(s)	431, 444, 1396, 1831
AcoI	YGGCCR	2 cut(s)	1129, 1571
AcsI	RAATTY	4 cut(s)	275, 329, 950, 1973
AcuI	CTGAAG	3 cut(s)	1374, 1380, 1887
AcyI	GRCGYC	2 cut(s)	33, 182
AfaI	GTAC	5 cut(s)	134, 626, 1002, 1053, 1160
AfiI	CCNNNNNNNGG	9 cut(s)	29, 142, 421, 798, 824, 1055, 1109, 1657, 1846
AflII	CTTAAG	1 cut(s)	1652
AgsI	TTSAA	8 cut(s)	662, 1035, 1235, 1271, 1729, 1754, 1888, 1949
AjiI	CACGTC	1 cut(s)	683
AjnI	CCWGG	3 cut(s)	432, 925, 1278
AleI	CACNNNNGTG	1 cut(s)	549
Alw26I	GTCTC	2 cut(s)	593, 985
AlwI	GGATC	4 cut(s)	431, 444, 1396, 1831
Ama87I	CYCGRG	2 cut(s)	218, 257
AoxI	GGCC	6 cut(s)	9, 665, 1129, 1137, 1276, 1571
ApeKI	GCWGC	4 cut(s)	150, 293, 1116, 1262
ApoI	RAATTY	4 cut(s)	275, 329, 950, 1973
AseI	ATTAAT	1 cut(s)	1799
Asp700I	GAANNNNTTC	2 cut(s)	343, 1703
AspLEI	GCGC	1 cut(s)	217
AspS9I	GGNCC	4 cut(s)	10, 557, 1137, 1276
AsuHPI	GGTGA	5 cut(s)	338, 563, 908, 941, 1157
AvaI	CYCGRG	2 cut(s)	218, 257
AvaII	GGWCC	1 cut(s)	557
BalI	TGGCCA	2 cut(s)	1131, 1573
BamHI	GGATCC	1 cut(s)	436
BanI	GGYRCC	1 cut(s)	233
BarI	GAAGNNNNNNTAC	2 cut(s)	546, 578
BauI	CACGAG	1 cut(s)	669
BbvCI	CCTCAGC	1 cut(s)	1620
BbvI	GCAGC	4 cut(s)	162, 280, 1128, 1249
BccI	CCATC	8 cut(s)	347, 510, 932, 976, 1404, 1540, 1679, 1870
BceAI	ACGGC	3 cut(s)	46, 179, 244
BcgI	CGANNNNNNTGC	2 cut(s)	178, 212
BciT130I	CCWGG	3 cut(s)	434, 927, 1280
BclI	TGATCA	2 cut(s)	640, 1324
BcoDI	GTCTC	2 cut(s)	593, 985
BfaI	CTAG	5 cut(s)	462, 914, 1314, 1664, 1808
BfmI	CTRYAG	3 cut(s)	294, 1263, 1611
BfrI	CTTAAG	1 cut(s)	1652
BfuAI	ACCTGC	1 cut(s)	1978
BisI	GCNGC	6 cut(s)	151, 232, 294, 1117, 1263, 1359
BlsI	GCNGC	6 cut(s)	152, 233, 295, 1118, 1264, 1360
Bme1390I	CCNGG	3 cut(s)	434, 927, 1280
Bme18I	GGWCC	1 cut(s)	557
BmeT110I	CYCGRG	2 cut(s)	218, 257
BmgBI	CACGTC	1 cut(s)	683
BmgT120I	GGNCC	4 cut(s)	10, 557, 1137, 1276
BmiI	GGNNCC	5 cut(s)	12, 120, 235, 438, 790
BmrFI	CCNGG	3 cut(s)	434, 927, 1280
BmsI	GCATC	7 cut(s)	598, 860, 1030, 1195, 1370, 1636, 1794
BpmI	CTGGAG	1 cut(s)	807
Bpu10I	CCTNAGC	2 cut(s)	687, 1620
BpuEI	CTTGAG	1 cut(s)	113
Bsa29I	ATCGAT	2 cut(s)	767, 2014
BsaAI	YACGTR	1 cut(s)	1004
BsaHI	GRCGYC	2 cut(s)	33, 182
BsaI	GGTCTC	1 cut(s)	985
BsaJI	CCNNGG	4 cut(s)	122, 432, 925, 1279
BsaXI	ACNNNNNCTCC	4 cut(s)	571, 601, 1538, 1568
Bsc4I	CCNNNNNNNGG	9 cut(s)	29, 142, 421, 798, 824, 1055, 1109, 1657, 1846
Bse1I	ACTGG	1 cut(s)	1132
Bse3DI	GCAATG	2 cut(s)	591, 1188
BseBI	CCWGG	3 cut(s)	434, 927, 1280
BseCI	ATCGAT	2 cut(s)	767, 2014
BseDI	CCNNGG	4 cut(s)	122, 432, 925, 1279
BseGI	GGATG	3 cut(s)	724, 851, 1186
BseLI	CCNNNNNNNGG	9 cut(s)	29, 142, 421, 798, 824, 1055, 1109, 1657, 1846
BseMI	GCAATG	2 cut(s)	591, 1188
BseMII	CTCAG	4 cut(s)	678, 1122, 1620, 1634
BseNI	ACTGG	1 cut(s)	1132
BseRI	GAGGAG	3 cut(s)	83, 104, 131
BseXI	GCAGC	4 cut(s)	162, 280, 1128, 1249
BseYI	CCCAGC	2 cut(s)	520, 741
Bsh1236I	CGCG	1 cut(s)	215
BshFI	GGCC	6 cut(s)	11, 667, 1131, 1139, 1278, 1573
BshNI	GGYRCC	1 cut(s)	233
BshVI	ATCGAT	2 cut(s)	767, 2014
BsiHKCI	CYCGRG	2 cut(s)	218, 257
BslFI	GGGAC	5 cut(s)	235, 800, 814, 1296, 1439
BslI	CCNNNNNNNGG	9 cut(s)	29, 142, 421, 798, 824, 1055, 1109, 1657, 1846
BsmAI	GTCTC	2 cut(s)	593, 985
BsmFI	GGGAC	5 cut(s)	235, 800, 814, 1296, 1439
BsmI	GAATGC	4 cut(s)	153, 1703, 1894, 1936
BsnI	GGCC	6 cut(s)	11, 667, 1131, 1139, 1278, 1573
Bso31I	GGTCTC	1 cut(s)	985
BsoBI	CYCGRG	2 cut(s)	218, 257
Bsp1407I	TGTACA	1 cut(s)	1051
BspACI	CCGC	5 cut(s)	20, 231, 1208, 1274, 1359
BspANI	GGCC	6 cut(s)	11, 667, 1131, 1139, 1278, 1573
BspCNI	CTCAG	4 cut(s)	679, 1121, 1619, 1633
BspDI	ATCGAT	2 cut(s)	767, 2014
BspFNI	CGCG	1 cut(s)	215
BspLI	GGNNCC	5 cut(s)	12, 120, 235, 438, 790
BspMAI	CTGCAG	2 cut(s)	298, 1267
BspMI	ACCTGC	1 cut(s)	1978
BspPI	GGATC	4 cut(s)	431, 444, 1396, 1831
BspT107I	GGYRCC	1 cut(s)	233
BspTI	CTTAAG	1 cut(s)	1652
BspTNI	GGTCTC	1 cut(s)	985
BsrDI	GCAATG	2 cut(s)	591, 1188
BsrGI	TGTACA	1 cut(s)	1051
BsrI	ACTGG	1 cut(s)	1132
BssECI	CCNNGG	4 cut(s)	122, 432, 925, 1279
BssNI	GRCGYC	2 cut(s)	33, 182
BssSI	CACGAG	1 cut(s)	669
Bst2BI	CACGAG	1 cut(s)	669
Bst2UI	CCWGG	3 cut(s)	434, 927, 1280
Bst4CI	ACNGT	4 cut(s)	165, 238, 1158, 1561
Bst6I	CTCTTC	6 cut(s)	54, 75, 81, 102, 108, 1594
BstACI	GRCGYC	2 cut(s)	33, 182
BstAFI	CTTAAG	1 cut(s)	1652
BstAPI	GCANNNNNTGC	1 cut(s)	1715
BstAUI	TGTACA	1 cut(s)	1051
BstBAI	YACGTR	1 cut(s)	1004
BstC8I	GCNNGC	5 cut(s)	613, 1276, 1817, 1821, 1926
BstDEI	CTNAG	5 cut(s)	308, 687, 1108, 1606, 1620
BstENI	CCTNNNNNAGG	2 cut(s)	1107, 1655
BstF5I	GGATG	3 cut(s)	724, 851, 1186
BstFNI	CGCG	1 cut(s)	215
BstHHI	GCGC	1 cut(s)	217
BstMAI	GTCTC	2 cut(s)	593, 985
BstMWI	GCNNNNNNNGC	9 cut(s)	39, 290, 608, 1262, 1271, 1358, 1514, 1715, 1993
BstNI	CCWGG	3 cut(s)	434, 927, 1280
BstNSI	RCATGY	2 cut(s)	569, 1928
BstSCI	CCNGG	3 cut(s)	432, 925, 1278
BstSFI	CTRYAG	3 cut(s)	294, 1263, 1611
BstSNI	TACGTA	1 cut(s)	1004
BstUI	CGCG	1 cut(s)	215
BstV1I	GCAGC	4 cut(s)	162, 280, 1128, 1249
BstX2I	RGATCY	2 cut(s)	436, 1388
BstYI	RGATCY	2 cut(s)	436, 1388
Bsu15I	ATCGAT	2 cut(s)	767, 2014
BsuRI	GGCC	6 cut(s)	11, 667, 1131, 1139, 1278, 1573
BsuTUI	ATCGAT	2 cut(s)	767, 2014
BtgZI	GCGATG	2 cut(s)	189, 395
BtrI	CACGTC	1 cut(s)	683
BtsCI	GGATG	3 cut(s)	724, 851, 1186
BtsI	GCAGTG	4 cut(s)	303, 576, 1592, 1674
BtsIMutI	CAGTG	8 cut(s)	161, 303, 381, 576, 1139, 1154, 1592, 1674
BveI	ACCTGC	1 cut(s)	1978
Cac8I	GCNNGC	5 cut(s)	613, 1276, 1817, 1821, 1926
CfoI	GCGC	1 cut(s)	217
Cfr13I	GGNCC	4 cut(s)	10, 557, 1137, 1276
ClaI	ATCGAT	2 cut(s)	767, 2014
CseI	GACGC	3 cut(s)	22, 171, 1424
Csp6I	GTAC	5 cut(s)	133, 625, 1001, 1052, 1159
CviAII	CATG	9 cut(s)	566, 812, 1014, 1055, 1238, 1247, 1401, 1639, 1925
CviQI	GTAC	5 cut(s)	133, 625, 1001, 1052, 1159
DdeI	CTNAG	5 cut(s)	308, 687, 1108, 1606, 1620
DraI	TTTAAA	1 cut(s)	529
DrdI	GACNNNNNNGTC	1 cut(s)	905
DseDI	GACNNNNNNGTC	1 cut(s)	905
EaeI	YGGCCR	2 cut(s)	1129, 1571
Eam1104I	CTCTTC	6 cut(s)	54, 75, 81, 102, 108, 1594
EarI	CTCTTC	6 cut(s)	54, 75, 81, 102, 108, 1594
EciI	GGCGGA	1 cut(s)	9
Eco105I	TACGTA	1 cut(s)	1004
Eco31I	GGTCTC	1 cut(s)	985
Eco47I	GGWCC	1 cut(s)	557
Eco57I	CTGAAG	3 cut(s)	1374, 1380, 1887
Eco88I	CYCGRG	2 cut(s)	218, 257
EcoNI	CCTNNNNNAGG	2 cut(s)	1107, 1655
EcoO109I	RGGNCCY	1 cut(s)	557
EcoRI	GAATTC	1 cut(s)	275
EcoRII	CCWGG	3 cut(s)	432, 925, 1278
EcoT22I	ATGCAT	1 cut(s)	1930
FaeI	CATG	9 cut(s)	569, 815, 1017, 1058, 1241, 1250, 1404, 1642, 1928
FaqI	GGGAC	5 cut(s)	235, 800, 814, 1296, 1439
FatI	CATG	9 cut(s)	565, 811, 1013, 1054, 1237, 1246, 1400, 1638, 1924
FauI	CCCGC	1 cut(s)	1267
FbaI	TGATCA	2 cut(s)	640, 1324
Fnu4HI	GCNGC	6 cut(s)	151, 232, 294, 1117, 1263, 1359
FokI	GGATG	3 cut(s)	731, 838, 1193
Fsp4HI	GCNGC	6 cut(s)	151, 232, 294, 1117, 1263, 1359
FspBI	CTAG	5 cut(s)	462, 914, 1314, 1664, 1808
GlaI	GCGC	1 cut(s)	216
GluI	GCNGC	6 cut(s)	151, 232, 294, 1117, 1263, 1359
GsaI	CCCAGC	2 cut(s)	524, 745
GsuI	CTGGAG	1 cut(s)	807
HaeIII	GGCC	6 cut(s)	11, 667, 1131, 1139, 1278, 1573
HgaI	GACGC	3 cut(s)	22, 171, 1424
HhaI	GCGC	1 cut(s)	217
Hin1I	GRCGYC	2 cut(s)	33, 182
Hin1II	CATG	9 cut(s)	569, 815, 1017, 1058, 1241, 1250, 1404, 1642, 1928
Hin6I	GCGC	1 cut(s)	215
HinP1I	GCGC	1 cut(s)	215
HincII	GTYRAC	3 cut(s)	168, 1557, 1876
HindII	GTYRAC	3 cut(s)	168, 1557, 1876
HindIII	AAGCTT	2 cut(s)	1254, 1817
HinfI	GANTC	9 cut(s)	16, 223, 262, 586, 722, 1772, 1777, 1907, 1955
HpaI	GTTAAC	1 cut(s)	168
HphI	GGTGA	5 cut(s)	338, 563, 908, 941, 1157
Hpy166II	GTNNAC	5 cut(s)	168, 625, 1292, 1557, 1876
Hpy188I	TCNGA	4 cut(s)	349, 861, 1467, 1867
Hpy8I	GTNNAC	5 cut(s)	168, 625, 1292, 1557, 1876
Hpy99I	CGWCG	5 cut(s)	38, 47, 50, 187, 200
HpyAV	CCTTC	7 cut(s)	32, 317, 415, 548, 940, 1136, 1756
HpyCH4III	ACNGT	4 cut(s)	165, 238, 1158, 1561
HpyCH4IV	ACGT	2 cut(s)	682, 1003
HpyF10VI	GCNNNNNNNGC	9 cut(s)	39, 290, 608, 1262, 1271, 1358, 1514, 1715, 1993
HpyF3I	CTNAG	5 cut(s)	308, 687, 1108, 1606, 1620
HpySE526I	ACGT	2 cut(s)	682, 1003
Hsp92I	GRCGYC	2 cut(s)	33, 182
Hsp92II	CATG	9 cut(s)	569, 815, 1017, 1058, 1241, 1250, 1404, 1642, 1928
HspAI	GCGC	1 cut(s)	215
Ksp22I	TGATCA	2 cut(s)	640, 1324
KspAI	GTTAAC	1 cut(s)	168
LmnI	GCTCC	4 cut(s)	118, 788, 970, 1546
Lsp1109I	GCAGC	4 cut(s)	162, 280, 1128, 1249
LweI	GCATC	7 cut(s)	598, 860, 1030, 1195, 1370, 1636, 1794
MaeI	CTAG	5 cut(s)	462, 914, 1314, 1664, 1808
MaeII	ACGT	2 cut(s)	682, 1003
MaeIII	GTNAC	2 cut(s)	896, 1009
MflI	RGATCY	2 cut(s)	436, 1388
MlsI	TGGCCA	2 cut(s)	1131, 1573
MluCI	AATT	6 cut(s)	275, 329, 950, 1376, 1796, 1973
MluNI	TGGCCA	2 cut(s)	1131, 1573
MlyI	GAGTC	4 cut(s)	217, 595, 716, 1949
MmeI	TCCRAC	1 cut(s)	1490
Mox20I	TGGCCA	2 cut(s)	1131, 1573
Mph1103I	ATGCAT	1 cut(s)	1930
MroXI	GAANNNNTTC	2 cut(s)	343, 1703
MscI	TGGCCA	2 cut(s)	1131, 1573
MseI	TTAA	9 cut(s)	167, 270, 504, 528, 1563, 1626, 1653, 1799, 1853
MslI	CAYNNNNRTG	2 cut(s)	549, 1366
Msp20I	TGGCCA	2 cut(s)	1131, 1573
MspCI	CTTAAG	1 cut(s)	1652
MspR9I	CCNGG	3 cut(s)	434, 927, 1280
Mva1269I	GAATGC	4 cut(s)	153, 1703, 1894, 1936
MvaI	CCWGG	3 cut(s)	434, 927, 1280
MvnI	CGCG	1 cut(s)	215
MwoI	GCNNNNNNNGC	9 cut(s)	39, 290, 608, 1262, 1271, 1358, 1514, 1715, 1993
NlaIII	CATG	9 cut(s)	569, 815, 1017, 1058, 1241, 1250, 1404, 1642, 1928
NlaIV	GGNNCC	5 cut(s)	12, 120, 235, 438, 790
NmeAIII	GCCGAG	1 cut(s)	147
NmuCI	GTSAC	1 cut(s)	896
NsiI	ATGCAT	1 cut(s)	1930
NspI	RCATGY	2 cut(s)	569, 1928
OliI	CACNNNNGTG	1 cut(s)	549
PaeI	GCATGC	1 cut(s)	1928
PcsI	WCGNNNNNNNCGW	2 cut(s)	42, 234
PctI	GAATGC	4 cut(s)	153, 1703, 1894, 1936
PdmI	GAANNNNTTC	2 cut(s)	343, 1703
PfeI	GAWTC	5 cut(s)	16, 262, 1772, 1777, 1907
PflMI	CCANNNNNTGG	2 cut(s)	142, 824
PkrI	GCNGC	6 cut(s)	152, 233, 295, 1118, 1264, 1360
PleI	GAGTC	4 cut(s)	217, 594, 716, 1949
PpsI	GAGTC	4 cut(s)	217, 594, 716, 1949
Ppu21I	YACGTR	1 cut(s)	1004
PpuMI	RGGWCCY	1 cut(s)	557
PshBI	ATTAAT	1 cut(s)	1799
Psp5II	RGGWCCY	1 cut(s)	557
Psp6I	CCWGG	3 cut(s)	432, 925, 1278
PspFI	CCCAGC	2 cut(s)	520, 741
PspGI	CCWGG	3 cut(s)	432, 925, 1278
PspN4I	GGNNCC	5 cut(s)	12, 120, 235, 438, 790
PspPI	GGNCC	4 cut(s)	10, 557, 1137, 1276
PspPPI	RGGWCCY	1 cut(s)	557
PstI	CTGCAG	2 cut(s)	298, 1267
PsuI	RGATCY	2 cut(s)	436, 1388
RsaI	GTAC	5 cut(s)	134, 626, 1002, 1053, 1160
RsaNI	GTAC	5 cut(s)	133, 625, 1001, 1052, 1159
RseI	CAYNNNNRTG	2 cut(s)	549, 1366
SaqAI	TTAA	9 cut(s)	167, 270, 504, 528, 1563, 1626, 1653, 1799, 1853
SatI	GCNGC	6 cut(s)	151, 232, 294, 1117, 1263, 1359
Sau96I	GGNCC	4 cut(s)	10, 557, 1137, 1276
SchI	GAGTC	4 cut(s)	217, 595, 716, 1949
ScrFI	CCNGG	3 cut(s)	434, 927, 1280
SfaNI	GCATC	7 cut(s)	598, 860, 1030, 1195, 1370, 1636, 1794
SfcI	CTRYAG	3 cut(s)	294, 1263, 1611
SinI	GGWCC	1 cut(s)	557
SmiMI	CAYNNNNRTG	2 cut(s)	549, 1366
SmlI	CTYRAG	2 cut(s)	128, 1652
SmoI	CTYRAG	2 cut(s)	128, 1652
SnaBI	TACGTA	1 cut(s)	1004
SphI	GCATGC	1 cut(s)	1928
Sse9I	AATT	6 cut(s)	275, 329, 950, 1376, 1796, 1973
SsiI	CCGC	5 cut(s)	20, 231, 1208, 1274, 1359
SspMI	CTAG	5 cut(s)	462, 914, 1314, 1664, 1808
StyD4I	CCNGG	3 cut(s)	432, 925, 1278
TaaI	ACNGT	4 cut(s)	165, 238, 1158, 1561
TaiI	ACGT	2 cut(s)	685, 1006
TaqI	TCGA	6 cut(s)	36, 249, 315, 767, 1775, 2014
TasI	AATT	6 cut(s)	275, 329, 950, 1376, 1796, 1973
TatI	WGTACW	2 cut(s)	1051, 1158
TauI	GCSGC	2 cut(s)	234, 1361
TfiI	GAWTC	5 cut(s)	16, 262, 1772, 1777, 1907
Tru1I	TTAA	9 cut(s)	167, 270, 504, 528, 1563, 1626, 1653, 1799, 1853
Tru9I	TTAA	9 cut(s)	167, 270, 504, 528, 1563, 1626, 1653, 1799, 1853
TscAI	CASTG	8 cut(s)	168, 303, 388, 576, 1139, 1161, 1599, 1674
TseFI	GTSAC	1 cut(s)	896
TseI	GCWGC	4 cut(s)	150, 293, 1116, 1262
Tsp45I	GTSAC	1 cut(s)	896
TspGWI	ACGGA	1 cut(s)	1300
TspRI	CASTG	8 cut(s)	168, 303, 388, 576, 1139, 1161, 1599, 1674
Van91I	CCANNNNNTGG	2 cut(s)	142, 824
Vha464I	CTTAAG	1 cut(s)	1652
VpaK11BI	GGWCC	1 cut(s)	557
VspI	ATTAAT	1 cut(s)	1799
XagI	CCTNNNNNAGG	2 cut(s)	1107, 1655
XapI	RAATTY	4 cut(s)	275, 329, 950, 1973
XbaI	TCTAGA	2 cut(s)	461, 1313
XceI	RCATGY	2 cut(s)	569, 1928
XmnI	GAANNNNTTC	2 cut(s)	343, 1703
XspI	CTAG	5 cut(s)	462, 914, 1314, 1664, 1808
Zsp2I	ATGCAT	1 cut(s)	1930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.